Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016091.01.T01 | XP_003601580.1 | 77.061 | 279 | 11 | 1 | 1 | 279 | 1 | 226 | 6.15E-140 | 403 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016091.01.T01 | Q9S750 | 56.154 | 260 | 61 | 1 | 16 | 275 | 30 | 236 | 1.51E-98 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016091.01.T01 | G7J9J2 | 77.061 | 279 | 11 | 1 | 1 | 279 | 1 | 226 | 2.94e-140 | 403 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0380016091.01 | 0.836228 | 1.058148e-56 | 1.325351e-53 |
| MsG0080048258.01 | MsG0380016091.01 | 0.853145 | 2.900421e-61 | 6.204721e-58 |
| MsG0080048311.01 | MsG0380016091.01 | 0.824727 | 6.900788e-54 | 6.164242e-51 |
| MsG0080048775.01 | MsG0380016091.01 | 0.863077 | 3.219329e-64 | 9.638175e-61 |
| MsG0080048781.01 | MsG0380016091.01 | 0.902702 | 7.399020e-79 | 1.061171e-74 |
| MsG0180000111.01 | MsG0380016091.01 | 0.815187 | 1.051145e-51 | 7.196965e-49 |
| MsG0180001293.01 | MsG0380016091.01 | 0.880596 | 4.818400e-70 | 2.733584e-66 |
| MsG0180001588.01 | MsG0380016091.01 | 0.808891 | 2.478024e-50 | 1.433742e-47 |
| MsG0180001719.01 | MsG0380016091.01 | 0.805999 | 1.017686e-49 | 5.462515e-47 |
| MsG0180002134.01 | MsG0380016091.01 | 0.802357 | 5.830659e-49 | 2.850391e-46 |
| MsG0180002211.01 | MsG0380016091.01 | 0.823495 | 1.342908e-53 | 1.158213e-50 |
| MsG0180002218.01 | MsG0380016091.01 | 0.848409 | 6.241675e-60 | 1.144449e-56 |
| MsG0180002397.01 | MsG0380016091.01 | 0.873396 | 1.518612e-67 | 6.580707e-64 |
| MsG0180002583.01 | MsG0380016091.01 | 0.816325 | 5.860803e-52 | 4.140300e-49 |
| MsG0180003421.01 | MsG0380016091.01 | 0.827238 | 1.746836e-54 | 1.676675e-51 |
| MsG0180003427.01 | MsG0380016091.01 | 0.812728 | 3.663320e-51 | 2.347109e-48 |
| MsG0180003485.01 | MsG0380016091.01 | 0.849154 | 3.879171e-60 | 7.288396e-57 |
| MsG0180003658.01 | MsG0380016091.01 | 0.876723 | 1.113322e-68 | 5.454388e-65 |
| MsG0180003698.01 | MsG0380016091.01 | 0.850087 | 2.129560e-60 | 4.124021e-57 |
| MsG0180003796.01 | MsG0380016091.01 | 0.854741 | 1.005977e-61 | 2.269236e-58 |
| MsG0180003857.01 | MsG0380016091.01 | 0.885909 | 5.414147e-72 | 3.784028e-68 |
| MsG0180003905.01 | MsG0380016091.01 | 0.811774 | 5.915617e-51 | 3.694469e-48 |
| MsG0180004120.01 | MsG0380016091.01 | 0.872810 | 2.388572e-67 | 1.013144e-63 |
| MsG0180004126.01 | MsG0380016091.01 | 0.868767 | 5.111832e-66 | 1.871497e-62 |
| MsG0180004184.01 | MsG0380016091.01 | 0.828797 | 7.363704e-55 | 7.395475e-52 |
| MsG0180004185.01 | MsG0380016091.01 | 0.882458 | 1.024292e-70 | 6.244434e-67 |
| MsG0180004299.01 | MsG0380016091.01 | 0.854364 | 1.293295e-61 | 2.881085e-58 |
| MsG0180004538.01 | MsG0380016091.01 | 0.869826 | 2.313943e-66 | 8.804697e-63 |
| MsG0180004583.01 | MsG0380016091.01 | 0.875282 | 3.483638e-68 | 1.617518e-64 |
| MsG0180004652.01 | MsG0380016091.01 | 0.818623 | 1.779571e-52 | 1.338834e-49 |
| MsG0180004661.01 | MsG0380016091.01 | 0.839025 | 2.027540e-57 | 2.764696e-54 |
| MsG0180004835.01 | MsG0380016091.01 | 0.829662 | 4.539831e-55 | 4.677158e-52 |
| MsG0180004995.01 | MsG0380016091.01 | 0.837679 | 4.508917e-57 | 5.901373e-54 |
| MsG0180005002.01 | MsG0380016091.01 | 0.828760 | 7.514317e-55 | 7.538539e-52 |
| MsG0180005048.01 | MsG0380016091.01 | 0.870780 | 1.126806e-66 | 4.437661e-63 |
| MsG0180005553.01 | MsG0380016091.01 | 0.814356 | 1.606099e-51 | 1.075282e-48 |
| MsG0180005569.01 | MsG0380016091.01 | 0.802217 | 6.230883e-49 | 3.034983e-46 |
| MsG0180005655.01 | MsG0380016091.01 | 0.831649 | 1.481223e-55 | 1.617477e-52 |
| MsG0180006133.01 | MsG0380016091.01 | 0.902624 | 8.012067e-79 | 1.144724e-74 |
| MsG0280010579.01 | MsG0380016091.01 | 0.862517 | 4.791097e-64 | 1.407060e-60 |
| MsG0280011331.01 | MsG0380016091.01 | 0.827622 | 1.412865e-54 | 1.371143e-51 |
| MsG0380011846.01 | MsG0380016091.01 | 0.810445 | 1.148867e-50 | 6.926365e-48 |
| MsG0380012118.01 | MsG0380016091.01 | 0.800565 | 1.357564e-48 | 6.341575e-46 |
| MsG0380012818.01 | MsG0380016091.01 | 0.833206 | 6.091276e-56 | 6.966436e-53 |
| MsG0380012956.01 | MsG0380016091.01 | 0.855710 | 5.256289e-62 | 1.224650e-58 |
| MsG0380013041.01 | MsG0380016091.01 | 0.827567 | 1.456820e-54 | 1.411599e-51 |
| MsG0380013584.01 | MsG0380016091.01 | 0.829544 | 4.851155e-55 | 4.980148e-52 |
| MsG0380014542.01 | MsG0380016091.01 | 0.817218 | 3.695788e-52 | 2.675298e-49 |
| MsG0380014666.01 | MsG0380016091.01 | 0.868484 | 6.310059e-66 | 2.286197e-62 |
| MsG0380014751.01 | MsG0380016091.01 | 0.813239 | 2.831281e-51 | 1.838786e-48 |
| MsG0380014807.01 | MsG0380016091.01 | 0.836532 | 8.857876e-57 | 1.119365e-53 |
| MsG0380015058.01 | MsG0380016091.01 | 0.810771 | 9.766843e-51 | 5.940048e-48 |
| MsG0380015090.01 | MsG0380016091.01 | 0.831476 | 1.634062e-55 | 1.775309e-52 |
| MsG0380015219.01 | MsG0380016091.01 | 0.868351 | 6.967377e-66 | 2.512313e-62 |
| MsG0380015340.01 | MsG0380016091.01 | 0.832502 | 9.114397e-56 | 1.020683e-52 |
| MsG0380015394.01 | MsG0380016091.01 | 0.866743 | 2.280942e-65 | 7.771928e-62 |
| MsG0380015825.01 | MsG0380016091.01 | 0.804459 | 2.138476e-49 | 1.103186e-46 |
| MsG0380015954.01 | MsG0380016091.01 | 0.859272 | 4.637512e-63 | 1.217770e-59 |
| MsG0380016027.01 | MsG0380016091.01 | 0.859785 | 3.252283e-63 | 8.692509e-60 |
| MsG0380016091.01 | MsG0380016092.01 | 0.845258 | 4.544152e-59 | 7.529332e-56 |
| MsG0380016091.01 | MsG0380016217.01 | 0.890170 | 1.254886e-73 | 1.043466e-69 |
| MsG0380016091.01 | MsG0380016225.01 | 0.898351 | 5.780214e-77 | 6.805474e-73 |
| MsG0380016091.01 | MsG0380016856.01 | 0.808003 | 3.833393e-50 | 2.166934e-47 |
| MsG0380016091.01 | MsG0380017128.01 | 0.821174 | 4.644573e-53 | 3.751114e-50 |
| MsG0380016091.01 | MsG0380017164.01 | 0.832234 | 1.061988e-55 | 1.179773e-52 |
| MsG0380016091.01 | MsG0380017180.01 | 0.803986 | 2.683046e-49 | 1.367484e-46 |
| MsG0380016091.01 | MsG0380017181.01 | 0.869110 | 3.956218e-66 | 1.467052e-62 |
| MsG0380016091.01 | MsG0380017282.01 | 0.829666 | 4.531567e-55 | 4.669075e-52 |
| MsG0380016091.01 | MsG0380017332.01 | 0.867408 | 1.399401e-65 | 4.881151e-62 |
| MsG0380016091.01 | MsG0380017361.01 | 0.876042 | 1.912534e-68 | 9.135318e-65 |
| MsG0380016091.01 | MsG0380017588.01 | 0.829678 | 4.500139e-55 | 4.638494e-52 |
| MsG0380016091.01 | MsG0380017605.01 | 0.872391 | 3.298265e-67 | 1.377778e-63 |
| MsG0380016091.01 | MsG0380017632.01 | 0.849445 | 3.218743e-60 | 6.103073e-57 |
| MsG0380016091.01 | MsG0380017696.01 | 0.809890 | 1.512697e-50 | 8.988245e-48 |
| MsG0380016091.01 | MsG0480018228.01 | 0.844020 | 9.788722e-59 | 1.559860e-55 |
| MsG0380016091.01 | MsG0480018526.01 | 0.859131 | 5.113077e-63 | 1.336018e-59 |
| MsG0380016091.01 | MsG0480018767.01 | 0.832952 | 7.047394e-56 | 7.998672e-53 |
| MsG0380016091.01 | MsG0480018785.01 | 0.877739 | 4.936309e-69 | 2.510033e-65 |
| MsG0380016091.01 | MsG0480020365.01 | 0.809284 | 2.041268e-50 | 1.193622e-47 |
| MsG0380016091.01 | MsG0480020366.01 | 0.809654 | 1.700795e-50 | 1.004376e-47 |
| MsG0380016091.01 | MsG0480020398.01 | 0.850596 | 1.533500e-60 | 3.019298e-57 |
| MsG0380016091.01 | MsG0480020856.01 | 0.853033 | 3.121416e-61 | 6.652782e-58 |
| MsG0380016091.01 | MsG0480020921.01 | 0.806764 | 7.022096e-50 | 3.843282e-47 |
| MsG0380016091.01 | MsG0480020970.01 | 0.802778 | 4.774504e-49 | 2.359219e-46 |
| MsG0380016091.01 | MsG0480021016.01 | 0.820664 | 6.087474e-53 | 4.846632e-50 |
| MsG0380016091.01 | MsG0480021100.01 | 0.822755 | 1.999183e-53 | 1.688589e-50 |
| MsG0380016091.01 | MsG0480021301.01 | 0.861189 | 1.222192e-63 | 3.428600e-60 |
| MsG0380016091.01 | MsG0480021773.01 | 0.850556 | 1.572948e-60 | 3.093026e-57 |
| MsG0380016091.01 | MsG0480021901.01 | 0.829481 | 5.023852e-55 | 5.148217e-52 |
| MsG0380016091.01 | MsG0480021902.01 | 0.860621 | 1.818236e-63 | 5.001261e-60 |
| MsG0380016091.01 | MsG0480022307.01 | 0.818293 | 2.114065e-52 | 1.576097e-49 |
| MsG0380016091.01 | MsG0480022559.01 | 0.848727 | 5.098912e-60 | 9.446363e-57 |
| MsG0380016091.01 | MsG0480022784.01 | 0.884071 | 2.622471e-71 | 1.705713e-67 |
| MsG0380016091.01 | MsG0480022931.01 | 0.820904 | 5.359631e-53 | 4.296220e-50 |
| MsG0380016091.01 | MsG0480022982.01 | 0.836656 | 8.232992e-57 | 1.044246e-53 |
| MsG0380016091.01 | MsG0480022991.01 | 0.835506 | 1.612613e-56 | 1.975985e-53 |
| MsG0380016091.01 | MsG0480022992.01 | 0.814096 | 1.832922e-51 | 1.218514e-48 |
| MsG0380016091.01 | MsG0480023003.01 | 0.854606 | 1.100273e-61 | 2.471080e-58 |
| MsG0380016091.01 | MsG0480023064.01 | 0.820598 | 6.301339e-53 | 5.007725e-50 |
| MsG0380016091.01 | MsG0480023194.01 | 0.808284 | 3.340788e-50 | 1.902513e-47 |
| MsG0380016091.01 | MsG0480023262.01 | 0.829649 | 4.573008e-55 | 4.709561e-52 |
| MsG0380016091.01 | MsG0480023296.01 | 0.856146 | 3.918580e-62 | 9.261851e-59 |
| MsG0380016091.01 | MsG0480023414.01 | 0.804613 | 1.985967e-49 | 1.028596e-46 |
| MsG0380016091.01 | MsG0480023424.01 | 0.831446 | 1.662024e-55 | 1.804082e-52 |
| MsG0380016091.01 | MsG0480023426.01 | 0.839937 | 1.174862e-57 | 1.647732e-54 |
| MsG0380016091.01 | MsG0480023484.01 | 0.849413 | 3.285023e-60 | 6.222309e-57 |
| MsG0380016091.01 | MsG0480023653.01 | 0.866793 | 2.198875e-65 | 7.505124e-62 |
| MsG0380016091.01 | MsG0480023672.01 | 0.836625 | 8.388081e-57 | 1.062944e-53 |
| MsG0380016091.01 | MsG0480023679.01 | 0.822109 | 2.823724e-53 | 2.341305e-50 |
| MsG0380016091.01 | MsG0480023706.01 | 0.896690 | 2.896113e-76 | 3.167300e-72 |
| MsG0380016091.01 | MsG0480023944.01 | 0.821761 | 3.399543e-53 | 2.790934e-50 |
| MsG0380016091.01 | MsG0480024002.01 | 0.841400 | 4.863479e-58 | 7.138180e-55 |
| MsG0380016091.01 | MsG0580024060.01 | 0.826315 | 2.901562e-54 | 2.711686e-51 |
| MsG0380016091.01 | MsG0580024158.01 | 0.821962 | 3.055305e-53 | 2.522626e-50 |
| MsG0380016091.01 | MsG0580024276.01 | 0.801001 | 1.106062e-48 | 5.224680e-46 |
| MsG0380016091.01 | MsG0580024657.01 | 0.840750 | 7.203758e-58 | 1.036115e-54 |
| MsG0380016091.01 | MsG0580024742.01 | 0.827775 | 1.298351e-54 | 1.265720e-51 |
| MsG0380016091.01 | MsG0580024787.01 | 0.898508 | 4.951930e-77 | 5.870024e-73 |
| MsG0380016091.01 | MsG0580024813.01 | 0.854664 | 1.058775e-61 | 2.382281e-58 |
| MsG0380016091.01 | MsG0580024835.01 | 0.801542 | 8.571066e-49 | 4.104017e-46 |
| MsG0380016091.01 | MsG0580024954.01 | 0.867631 | 1.187312e-65 | 4.173673e-62 |
| MsG0380016091.01 | MsG0580025093.01 | 0.842643 | 2.280886e-58 | 3.480213e-55 |
| MsG0380016091.01 | MsG0580025177.01 | 0.882951 | 6.769790e-71 | 4.207731e-67 |
| MsG0380016091.01 | MsG0580025186.01 | 0.854883 | 9.145360e-62 | 2.072747e-58 |
| MsG0380016091.01 | MsG0580025504.01 | 0.838636 | 2.556075e-57 | 3.444579e-54 |
| MsG0380016091.01 | MsG0580025506.01 | 0.825389 | 4.814659e-54 | 4.382247e-51 |
| MsG0380016091.01 | MsG0580025775.01 | 0.837992 | 3.746786e-57 | 4.951139e-54 |
| MsG0380016091.01 | MsG0580026142.01 | 0.815154 | 1.069214e-51 | 7.314152e-49 |
| MsG0380016091.01 | MsG0580028330.01 | 0.829811 | 4.177817e-55 | 4.323455e-52 |
| MsG0380016091.01 | MsG0580028633.01 | 0.816251 | 6.090096e-52 | 4.293443e-49 |
| MsG0380016091.01 | MsG0580028756.01 | 0.858931 | 5.871020e-63 | 1.523785e-59 |
| MsG0380016091.01 | MsG0580028923.01 | 0.846495 | 2.095128e-59 | 3.613050e-56 |
| MsG0380016091.01 | MsG0580028927.01 | 0.836769 | 7.706212e-57 | 9.809086e-54 |
| MsG0380016091.01 | MsG0580028955.01 | 0.850935 | 1.230630e-60 | 2.450430e-57 |
| MsG0380016091.01 | MsG0580029197.01 | 0.844294 | 8.262641e-59 | 1.327941e-55 |
| MsG0380016091.01 | MsG0580029261.01 | 0.848280 | 6.776525e-60 | 1.237304e-56 |
| MsG0380016091.01 | MsG0580029591.01 | 0.890308 | 1.107860e-73 | 9.266388e-70 |
| MsG0380016091.01 | MsG0680030383.01 | 0.802498 | 5.451365e-49 | 2.674425e-46 |
| MsG0380016091.01 | MsG0680031616.01 | 0.869991 | 2.044422e-66 | 7.825844e-63 |
| MsG0380016091.01 | MsG0680032772.01 | 0.834233 | 3.375024e-56 | 3.980358e-53 |
| MsG0380016091.01 | MsG0680033405.01 | 0.801032 | 1.090423e-48 | 5.154668e-46 |
| MsG0380016091.01 | MsG0680033696.01 | 0.822752 | 2.002471e-53 | 1.691217e-50 |
| MsG0380016091.01 | MsG0680034415.01 | 0.806469 | 8.102066e-50 | 4.401142e-47 |
| MsG0380016091.01 | MsG0680034651.01 | 0.807641 | 4.576696e-50 | 2.562573e-47 |
| MsG0380016091.01 | MsG0680034764.01 | 0.823042 | 1.713344e-53 | 1.458982e-50 |
| MsG0380016091.01 | MsG0680035350.01 | 0.861036 | 1.359690e-63 | 3.793937e-60 |
| MsG0380016091.01 | MsG0680035776.01 | 0.854780 | 9.800929e-62 | 2.213925e-58 |
| MsG0380016091.01 | MsG0680035792.01 | 0.802920 | 4.461476e-49 | 2.212460e-46 |
| MsG0380016091.01 | MsG0780036534.01 | 0.832958 | 7.022546e-56 | 7.972093e-53 |
| MsG0380016091.01 | MsG0780037158.01 | 0.819908 | 9.073105e-53 | 7.074317e-50 |
| MsG0380016091.01 | MsG0780037741.01 | 0.862699 | 4.212963e-64 | 1.245007e-60 |
| MsG0380016091.01 | MsG0780038393.01 | 0.873556 | 1.342008e-67 | 5.849274e-64 |
| MsG0380016091.01 | MsG0780038402.01 | 0.834390 | 3.081542e-56 | 3.651768e-53 |
| MsG0380016091.01 | MsG0780038445.01 | 0.849033 | 4.192446e-60 | 7.844667e-57 |
| MsG0380016091.01 | MsG0780038736.01 | 0.861749 | 8.244395e-64 | 2.356905e-60 |
| MsG0380016091.01 | MsG0780039861.01 | 0.867362 | 1.447005e-65 | 5.038975e-62 |
| MsG0380016091.01 | MsG0780040118.01 | 0.816979 | 4.181568e-52 | 3.007438e-49 |
| MsG0380016091.01 | MsG0780040364.01 | 0.871489 | 6.575835e-67 | 2.657695e-63 |
| MsG0380016091.01 | MsG0780040620.01 | 0.873620 | 1.276716e-67 | 5.576632e-64 |
| MsG0380016091.01 | MsG0780040641.01 | 0.884943 | 1.244909e-71 | 8.379686e-68 |
| MsG0380016091.01 | MsG0780040828.01 | 0.804098 | 2.542841e-49 | 1.299710e-46 |
| MsG0380016091.01 | MsG0780040830.01 | 0.807238 | 5.572675e-50 | 3.087860e-47 |
| MsG0380016091.01 | MsG0780040899.01 | 0.827167 | 1.816643e-54 | 1.740010e-51 |
| MsG0380016091.01 | MsG0780041008.01 | 0.819089 | 1.394882e-52 | 1.063051e-49 |
| MsG0380016091.01 | MsG0780041141.01 | 0.857168 | 1.962034e-62 | 4.798830e-59 |
| MsG0380016091.01 | MsG0780041142.01 | 0.826973 | 2.021722e-54 | 1.925487e-51 |
| MsG0380016091.01 | MsG0780041143.01 | 0.866415 | 2.899839e-65 | 9.765593e-62 |
| MsG0380016091.01 | MsG0780041219.01 | 0.801357 | 9.356527e-49 | 4.459233e-46 |
| MsG0380016091.01 | MsG0780041273.01 | 0.826174 | 3.134812e-54 | 2.917947e-51 |
| MsG0380016091.01 | MsG0780041340.01 | 0.866845 | 2.116675e-65 | 7.238264e-62 |
| MsG0380016091.01 | MsG0780041359.01 | 0.883089 | 6.027391e-71 | 3.767756e-67 |
| MsG0380016091.01 | MsG0880041930.01 | 0.813821 | 2.108498e-51 | 1.391292e-48 |
| MsG0380016091.01 | MsG0880042833.01 | 0.804995 | 1.653058e-49 | 8.646545e-47 |
| MsG0380016091.01 | MsG0880043684.01 | 0.842065 | 3.245507e-58 | 4.863396e-55 |
| MsG0380016091.01 | MsG0880043714.01 | 0.838617 | 2.586119e-57 | 3.482836e-54 |
| MsG0380016091.01 | MsG0880043752.01 | 0.819360 | 1.209710e-52 | 9.288264e-50 |
| MsG0380016091.01 | MsG0880044103.01 | 0.829649 | 4.573277e-55 | 4.709824e-52 |
| MsG0380016091.01 | MsG0880044437.01 | 0.843539 | 1.316533e-58 | 2.066414e-55 |
| MsG0380016091.01 | MsG0880044989.01 | 0.848307 | 6.662538e-60 | 1.217538e-56 |
| MsG0380016091.01 | MsG0880045015.01 | 0.831577 | 1.542358e-55 | 1.680855e-52 |
| MsG0380016091.01 | MsG0880045356.01 | 0.802886 | 4.534718e-49 | 2.246845e-46 |
| MsG0380016091.01 | MsG0880045439.01 | 0.851504 | 8.499837e-61 | 1.724058e-57 |
| MsG0380016091.01 | MsG0880045584.01 | 0.890013 | 1.445406e-73 | 1.194058e-69 |
| MsG0380016091.01 | MsG0880045612.01 | 0.899856 | 1.309143e-77 | 1.648498e-73 |
| MsG0380016091.01 | MsG0880045647.01 | 0.884764 | 1.451157e-71 | 9.697688e-68 |
| MsG0380016091.01 | MsG0880045989.01 | 0.812174 | 4.840498e-51 | 3.055887e-48 |
| MsG0380016091.01 | MsG0880046431.01 | 0.833342 | 5.633934e-56 | 6.470458e-53 |
| MsG0380016091.01 | MsG0880046646.01 | 0.819998 | 8.649799e-53 | 6.761340e-50 |
| MsG0380016091.01 | MsG0880046885.01 | 0.810461 | 1.139558e-50 | 6.873125e-48 |
| MsG0380016091.01 | MsG0880046904.01 | 0.908774 | 1.183583e-81 | 2.232609e-77 |
| MsG0380016091.01 | MsG0880046905.01 | 0.857355 | 1.727262e-62 | 4.251429e-59 |
| MsG0380016091.01 | MsG0880046906.01 | 0.890118 | 1.315481e-73 | 1.091555e-69 |
| MsG0380016091.01 | MsG0880046991.01 | 0.831004 | 2.133496e-55 | 2.285679e-52 |
| MsG0380016091.01 | MsG0880046993.01 | 0.808593 | 2.869572e-50 | 1.647370e-47 |
| MsG0380016091.01 | MsG0880047223.01 | 0.801467 | 8.881618e-49 | 4.244632e-46 |
| MsG0380016091.01 | MsG0880047466.01 | 0.825840 | 3.763073e-54 | 3.469746e-51 |
| MsG0380016091.01 | MsG0880047640.01 | 0.841075 | 5.921168e-58 | 8.601059e-55 |
| MsG0380016091.01 | MsG0880047649.01 | 0.890248 | 1.170021e-73 | 9.760859e-70 |
| MsG0280006540.01 | MsG0380016091.01 | 0.830846 | 2.332633e-55 | 2.487354e-52 |
| MsG0280006563.01 | MsG0380016091.01 | 0.874062 | 9.053249e-68 | 4.018260e-64 |
| MsG0280007003.01 | MsG0380016091.01 | 0.860641 | 1.792794e-63 | 4.934874e-60 |
| MsG0280007359.01 | MsG0380016091.01 | 0.818216 | 2.201144e-52 | 1.637513e-49 |
| MsG0280007419.01 | MsG0380016091.01 | 0.828056 | 1.111143e-54 | 1.092255e-51 |
| MsG0280007667.01 | MsG0380016091.01 | 0.800009 | 1.761843e-48 | 8.114693e-46 |
| MsG0280008407.01 | MsG0380016091.01 | 0.824654 | 7.180895e-54 | 6.401020e-51 |
| MsG0280009866.01 | MsG0380016091.01 | 0.855439 | 6.302902e-62 | 1.455246e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016091.01.T01 | MTR_3g083230 | 77.061 | 279 | 11 | 1 | 1 | 279 | 1 | 226 | 7.44e-144 | 403 |
| MsG0380016091.01.T01 | MTR_3g082350 | 80.000 | 65 | 9 | 1 | 188 | 252 | 8 | 68 | 4.81e-30 | 109 |
| MsG0380016091.01.T01 | MTR_3g083240 | 56.989 | 93 | 30 | 2 | 146 | 238 | 52 | 134 | 5.64e-21 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016091.01.T01 | AT3G07800 | 56.154 | 260 | 61 | 1 | 16 | 275 | 30 | 236 | 1.54e-99 | 291 |
| MsG0380016091.01.T01 | AT5G23070 | 52.893 | 242 | 62 | 1 | 17 | 258 | 77 | 266 | 1.49e-89 | 268 |
Find 67 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGAATGTGTTATTATTT+TGG | 0.160178 | 3:+79044380 | MsG0380016091.01.T01:CDS |
| TCCAAATGGCTTCTTCCTTT+GGG | 0.220829 | 3:+79043167 | None:intergenic |
| ATCCAAATGGCTTCTTCCTT+TGG | 0.275941 | 3:+79043166 | None:intergenic |
| CAACTGGGGCTGCCTCAATA+AGG | 0.285622 | 3:-79044890 | None:intergenic |
| GGTAAAATTGTCGTCGTTGC+AGG | 0.308301 | 3:+79044487 | MsG0380016091.01.T01:CDS |
| TTTGTGGGTCCCATGTTTGC+TGG | 0.311613 | 3:+79043235 | MsG0380016091.01.T01:CDS |
| TGGATGCAGTTGGATGTTAT+TGG | 0.318715 | 3:+79044400 | MsG0380016091.01.T01:CDS |
| GAGAAACAAACTGAACTAAT+TGG | 0.344757 | 3:+79044756 | MsG0380016091.01.T01:CDS |
| TTAATTATTTATCAAACAAC+TGG | 0.346132 | 3:-79044906 | None:intergenic |
| TCTTTGAACAACATCAAATC+TGG | 0.352909 | 3:-79043532 | None:intergenic |
| CAAATCTGGCAATGCCCAAC+AGG | 0.359213 | 3:-79043518 | None:intergenic |
| TGGTTCTTCAGGAGAAGCTT+TGG | 0.392708 | 3:+79044630 | MsG0380016091.01.T01:intron |
| ATGGCTTCTTCCTTTGGGGT+TGG | 0.395097 | 3:+79043172 | MsG0380016091.01.T01:CDS |
| CGGGATTAAATTTCCCTGTT+GGG | 0.403088 | 3:+79043504 | MsG0380016091.01.T01:CDS |
| AATTGTCGTCGTTGCAGGCC+TGG | 0.427705 | 3:+79044492 | MsG0380016091.01.T01:CDS |
| CGGCGAGATCCATCTCTTTG+TGG | 0.427846 | 3:+79043219 | MsG0380016091.01.T01:CDS |
| ACTATGTCAGTGACGTGGTT+GGG | 0.429859 | 3:+79044226 | MsG0380016091.01.T01:intron |
| TTCTTTACCTTGAGGAAGAC+GGG | 0.457820 | 3:+79044732 | MsG0380016091.01.T01:CDS |
| GGCGAGATCCATCTCTTTGT+GGG | 0.460938 | 3:+79043220 | MsG0380016091.01.T01:CDS |
| TTAGTTACAGTATCAGCAAT+TGG | 0.463498 | 3:-79044672 | None:intergenic |
| GCTGTCAAGAAGTGTGTCTT+CGG | 0.463980 | 3:+79044843 | MsG0380016091.01.T01:CDS |
| AACTGGGGCTGCCTCAATAA+GGG | 0.464936 | 3:-79044889 | None:intergenic |
| CGGACTTAATACGACGAAGA+AGG | 0.470773 | 3:-79043270 | None:intergenic |
| ACATAGTGATGGCGGCAAAC+CGG | 0.478921 | 3:-79044798 | None:intergenic |
| CCAAATGGCTTCTTCCTTTG+GGG | 0.481281 | 3:+79043168 | None:intergenic |
| AACAAACTGAACTAATTGGC+GGG | 0.486011 | 3:+79044760 | MsG0380016091.01.T01:CDS |
| CGTCTTCCTCAAGGTAAAGA+AGG | 0.488284 | 3:-79044730 | None:intergenic |
| CGGTCATGAGGCCTATCAAA+AGG | 0.492616 | 3:+79043561 | MsG0380016091.01.T01:CDS |
| TCTCACTCTCACTCATCATC+CGG | 0.499669 | 3:+79043199 | MsG0380016091.01.T01:CDS |
| ACGGGATTAAATTTCCCTGT+TGG | 0.499672 | 3:+79043503 | MsG0380016091.01.T01:CDS |
| CGGGGCTGATTTATACATGC+CGG | 0.506335 | 3:+79044779 | MsG0380016091.01.T01:CDS |
| CTTCTTTACCTTGAGGAAGA+CGG | 0.507473 | 3:+79044731 | MsG0380016091.01.T01:CDS |
| CTATGTCAGTGACGTGGTTG+GGG | 0.508147 | 3:+79044227 | MsG0380016091.01.T01:intron |
| TGGAAGTGATTCCCTTATTG+AGG | 0.511120 | 3:+79044878 | MsG0380016091.01.T01:CDS |
| ATGTTGTTCAAAGATAAATA+CGG | 0.514186 | 3:+79043541 | MsG0380016091.01.T01:CDS |
| TGCCGCCATCACTATGTGAA+TGG | 0.524204 | 3:+79044804 | MsG0380016091.01.T01:CDS |
| GTGAGAAGAGCCAACCCCAA+AGG | 0.526170 | 3:-79043182 | None:intergenic |
| TTTCTCTCCCGTCTTCCTCA+AGG | 0.528615 | 3:-79044739 | None:intergenic |
| CAGCTCGTTGTGAACTATGC+GGG | 0.536830 | 3:+79044700 | MsG0380016091.01.T01:CDS |
| GGACTTAATACGACGAAGAA+GGG | 0.537672 | 3:-79043269 | None:intergenic |
| ACTCTGTTGTGACCCATGAC+GGG | 0.543331 | 3:+79043485 | MsG0380016091.01.T01:CDS |
| GGGAAATTTAATCCCGTCAT+GGG | 0.553176 | 3:-79043497 | None:intergenic |
| ACCTCAAGTAATCACCATCC+AGG | 0.557271 | 3:-79044510 | None:intergenic |
| AGGGAAATTTAATCCCGTCA+TGG | 0.569407 | 3:-79043498 | None:intergenic |
| GTCGTCGTTGCAGGCCTGGA+TGG | 0.573763 | 3:+79044496 | MsG0380016091.01.T01:CDS |
| ATTAAGTCCGAAGTTGATAA+CGG | 0.580529 | 3:+79043283 | MsG0380016091.01.T01:CDS |
| ACATGGGACCCACAAAGAGA+TGG | 0.584227 | 3:-79043228 | None:intergenic |
| TGCAAGGCTGCTGATGAAGA+TGG | 0.584415 | 3:+79044466 | MsG0380016091.01.T01:CDS |
| AGTCCGAAGTTGATAACGGC+AGG | 0.586524 | 3:+79043287 | MsG0380016091.01.T01:CDS |
| GCCTGGATGGTGATTACTTG+AGG | 0.593913 | 3:+79044509 | MsG0380016091.01.T01:CDS |
| AAACAAACTGAACTAATTGG+CGG | 0.595121 | 3:+79044759 | MsG0380016091.01.T01:CDS |
| TAATTATTTATCAAACAACT+GGG | 0.597416 | 3:-79044905 | None:intergenic |
| TGTGAATGGTCAAGTTGTTG+TGG | 0.597690 | 3:+79044818 | MsG0380016091.01.T01:CDS |
| GACTCTGTTGTGACCCATGA+CGG | 0.598002 | 3:+79043484 | MsG0380016091.01.T01:CDS |
| GTACCTGCCGTTATCAACTT+CGG | 0.610552 | 3:-79043290 | None:intergenic |
| AACGCGCCTTCTTTACCTTG+AGG | 0.616597 | 3:+79044724 | MsG0380016091.01.T01:CDS |
| CAAAGATAAATACGGTCATG+AGG | 0.624640 | 3:+79043549 | MsG0380016091.01.T01:CDS |
| CACAAAGAGATGGATCTCGC+CGG | 0.628278 | 3:-79043218 | None:intergenic |
| CTTGACCATTCACATAGTGA+TGG | 0.636820 | 3:-79044809 | None:intergenic |
| ACAAACTGAACTAATTGGCG+GGG | 0.637191 | 3:+79044761 | MsG0380016091.01.T01:CDS |
| AAATCTGGCAATGCCCAACA+GGG | 0.637311 | 3:-79043517 | None:intergenic |
| TACTATGTCAGTGACGTGGT+TGG | 0.643046 | 3:+79044225 | MsG0380016091.01.T01:intron |
| GACCATTCACATAGTGATGG+CGG | 0.647772 | 3:-79044806 | None:intergenic |
| AATTATTTATCAAACAACTG+GGG | 0.668394 | 3:-79044904 | None:intergenic |
| GGATGTTATTGGTATAGACG+AGG | 0.669586 | 3:+79044411 | MsG0380016091.01.T01:CDS |
| ACAGCTCGTTGTGAACTATG+CGG | 0.719807 | 3:+79044699 | MsG0380016091.01.T01:CDS |
| ATGTTACTATGTCAGTGACG+TGG | 0.750638 | 3:+79044221 | MsG0380016091.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAATAACATAATGTA+TGG | + | Chr3:79044320-79044339 | MsG0380016091.01.T01:intron | 10.0% |
| !! | TTCAAAAGAAAAAAAAGTTA+TGG | + | Chr3:79043940-79043959 | MsG0380016091.01.T01:intron | 15.0% |
| !!! | ATTATCATAATTTTTTGTGA+AGG | + | Chr3:79043416-79043435 | MsG0380016091.01.T01:intron | 15.0% |
| !!! | GTAAGTTTTTTTTTAAATCT+CGG | + | Chr3:79044285-79044304 | MsG0380016091.01.T01:intron | 15.0% |
| !! | ATGTTGTTCAAAGATAAATA+CGG | + | Chr3:79043541-79043560 | MsG0380016091.01.T01:CDS | 20.0% |
| !! | TTCAAATTGTGATCAATATA+TGG | + | Chr3:79043715-79043734 | MsG0380016091.01.T01:intron | 20.0% |
| !!! | ATTTTGAGAAAAAAATGTCA+AGG | + | Chr3:79044536-79044555 | MsG0380016091.01.T01:intron | 20.0% |
| ! | AACAAGAAGAAAAAAGAATC+TGG | - | Chr3:79043329-79043348 | None:intergenic | 25.0% |
| ! | ACAAGAAGAAAAAAGAATCT+GGG | - | Chr3:79043328-79043347 | None:intergenic | 25.0% |
| ! | ACACCATTAGAAATTTAGAA+GGG | - | Chr3:79044606-79044625 | None:intergenic | 25.0% |
| ! | GATGAAATGTTATGATTACT+AGG | + | Chr3:79043370-79043389 | MsG0380016091.01.T01:intron | 25.0% |
| ! | GTGATTTAAAAAACCTTTAG+TGG | - | Chr3:79044111-79044130 | None:intergenic | 25.0% |
| ! | TATTGTTGCATTTGCAATTA+TGG | + | Chr3:79044042-79044061 | MsG0380016091.01.T01:intron | 25.0% |
| !! | AAATTTCTAATGGTGTGTTT+TGG | + | Chr3:79044610-79044629 | MsG0380016091.01.T01:intron | 25.0% |
| !! | CATTGAAATTACCTTTTGAT+AGG | - | Chr3:79043575-79043594 | None:intergenic | 25.0% |
| !!! | AGAAATTTTGATGATACAAC+TGG | + | Chr3:79044083-79044102 | MsG0380016091.01.T01:intron | 25.0% |
| !!! | ATAGCATTGATTGAATCAAT+TGG | + | Chr3:79044132-79044151 | MsG0380016091.01.T01:intron | 25.0% |
| !!! | ATTTTAGTAGTTACAAGTGT+TGG | + | Chr3:79043657-79043676 | MsG0380016091.01.T01:intron | 25.0% |
| !!! | TAATTTTTTGTGAAGGAATG+TGG | + | Chr3:79043423-79043442 | MsG0380016091.01.T01:intron | 25.0% |
| !!! | TCTTTTGAAAACTCAATATC+TGG | - | Chr3:79043929-79043948 | None:intergenic | 25.0% |
| !!! | TGCTGAATGTGTTATTATTT+TGG | + | Chr3:79044380-79044399 | MsG0380016091.01.T01:CDS | 25.0% |
| AAACAAACTGAACTAATTGG+CGG | + | Chr3:79044759-79044778 | MsG0380016091.01.T01:CDS | 30.0% | |
| AATTATGGTTGTGGTTACAT+AGG | + | Chr3:79044057-79044076 | MsG0380016091.01.T01:intron | 30.0% | |
| CACACCATTAGAAATTTAGA+AGG | - | Chr3:79044607-79044626 | None:intergenic | 30.0% | |
| GAAAAAAAAGTTATGGCTCA+AGG | + | Chr3:79043947-79043966 | MsG0380016091.01.T01:intron | 30.0% | |
| GAGAAACAAACTGAACTAAT+TGG | + | Chr3:79044756-79044775 | MsG0380016091.01.T01:CDS | 30.0% | |
| TCACCCTTCTAAATTTCTAA+TGG | + | Chr3:79044600-79044619 | MsG0380016091.01.T01:intron | 30.0% | |
| TCTTTGAACAACATCAAATC+TGG | - | Chr3:79043535-79043554 | None:intergenic | 30.0% | |
| TGTGATCAATATATGGTTCA+AGG | + | Chr3:79043722-79043741 | MsG0380016091.01.T01:intron | 30.0% | |
| TGTTGGAGTAATCATATCAA+TGG | + | Chr3:79043674-79043693 | MsG0380016091.01.T01:intron | 30.0% | |
| TTAGTTACAGTATCAGCAAT+TGG | - | Chr3:79044675-79044694 | None:intergenic | 30.0% | |
| !! | ATTAAGTCCGAAGTTGATAA+CGG | + | Chr3:79043283-79043302 | MsG0380016091.01.T01:CDS | 30.0% |
| !! | CATAGATCTGGCTTTAAATT+GGG | + | Chr3:79043852-79043871 | MsG0380016091.01.T01:intron | 30.0% |
| !!! | GTTATTATTTTGGATGCAGT+TGG | + | Chr3:79044390-79044409 | MsG0380016091.01.T01:CDS | 30.0% |
| AAAACTCAATATCTGGCCTA+AGG | - | Chr3:79043922-79043941 | None:intergenic | 35.0% | |
| AACAAACTGAACTAATTGGC+GGG | + | Chr3:79044760-79044779 | MsG0380016091.01.T01:CDS | 35.0% | |
| AGTCTTAAATCAACACCACA+AGG | - | Chr3:79043766-79043785 | None:intergenic | 35.0% | |
| CAAAGATAAATACGGTCATG+AGG | + | Chr3:79043549-79043568 | MsG0380016091.01.T01:CDS | 35.0% | |
| TGCATTTGCAATTATGGTTG+TGG | + | Chr3:79044048-79044067 | MsG0380016091.01.T01:intron | 35.0% | |
| ! | CCAATTTAAAGCCAGATCTA+TGG | - | Chr3:79043854-79043873 | None:intergenic | 35.0% |
| ! | CTTATATGACTTTTGCTGCA+AGG | + | Chr3:79044450-79044469 | MsG0380016091.01.T01:CDS | 35.0% |
| !! | CCATAGATCTGGCTTTAAAT+TGG | + | Chr3:79043851-79043870 | MsG0380016091.01.T01:intron | 35.0% |
| !! | GTGGTGTTGATTTAAGACTT+TGG | + | Chr3:79043767-79043786 | MsG0380016091.01.T01:intron | 35.0% |
| AATTGAACCCGAGACCTTAT+GGG | - | Chr3:79043802-79043821 | None:intergenic | 40.0% | |
| ACAAACTGAACTAATTGGCG+GGG | + | Chr3:79044761-79044780 | MsG0380016091.01.T01:CDS | 40.0% | |
| ACGGGATTAAATTTCCCTGT+TGG | + | Chr3:79043503-79043522 | MsG0380016091.01.T01:CDS | 40.0% | |
| AGGGAAATTTAATCCCGTCA+TGG | - | Chr3:79043501-79043520 | None:intergenic | 40.0% | |
| ATGTTACTATGTCAGTGACG+TGG | + | Chr3:79044221-79044240 | MsG0380016091.01.T01:intron | 40.0% | |
| ATTGGACTCCTCGGATTAAT+CGG | + | Chr3:79043895-79043914 | MsG0380016091.01.T01:intron | 40.0% | |
| CGGGATTAAATTTCCCTGTT+GGG | + | Chr3:79043504-79043523 | MsG0380016091.01.T01:CDS | 40.0% | |
| CTTCTTTACCTTGAGGAAGA+CGG | + | Chr3:79044731-79044750 | MsG0380016091.01.T01:CDS | 40.0% | |
| CTTGACCATTCACATAGTGA+TGG | - | Chr3:79044812-79044831 | None:intergenic | 40.0% | |
| GATACAACTGGTACCACTAA+AGG | + | Chr3:79044095-79044114 | MsG0380016091.01.T01:intron | 40.0% | |
| GGACTTAATACGACGAAGAA+GGG | - | Chr3:79043272-79043291 | None:intergenic | 40.0% | |
| GGATGTTATTGGTATAGACG+AGG | + | Chr3:79044411-79044430 | MsG0380016091.01.T01:CDS | 40.0% | |
| GGGAAATTTAATCCCGTCAT+GGG | - | Chr3:79043500-79043519 | None:intergenic | 40.0% | |
| GTCTTCGGATCTCAAAAAGT+TGG | + | Chr3:79044858-79044877 | MsG0380016091.01.T01:CDS | 40.0% | |
| TGGAAGTGATTCCCTTATTG+AGG | + | Chr3:79044878-79044897 | MsG0380016091.01.T01:CDS | 40.0% | |
| TGGATGCAGTTGGATGTTAT+TGG | + | Chr3:79044400-79044419 | MsG0380016091.01.T01:CDS | 40.0% | |
| TTCTTTACCTTGAGGAAGAC+GGG | + | Chr3:79044732-79044751 | MsG0380016091.01.T01:CDS | 40.0% | |
| TTTAAATTGGGCTCCACAAG+TGG | + | Chr3:79043864-79043883 | MsG0380016091.01.T01:intron | 40.0% | |
| ! | ATTCCTTCCGGTGTCAATTT+CGG | + | Chr3:79043819-79043838 | MsG0380016091.01.T01:intron | 40.0% |
| ! | TGTGAATGGTCAAGTTGTTG+TGG | + | Chr3:79044818-79044837 | MsG0380016091.01.T01:CDS | 40.0% |
| !!! | ATGGTGTGTTTTGGTTCTTC+AGG | + | Chr3:79044619-79044638 | MsG0380016091.01.T01:intron | 40.0% |
| AAATCTGGCAATGCCCAACA+GGG | - | Chr3:79043520-79043539 | None:intergenic | 45.0% | |
| ACAGCTCGTTGTGAACTATG+CGG | + | Chr3:79044699-79044718 | MsG0380016091.01.T01:CDS | 45.0% | |
| ACCTCAAGTAATCACCATCC+AGG | - | Chr3:79044513-79044532 | None:intergenic | 45.0% | |
| ACTATGTCAGTGACGTGGTT+GGG | + | Chr3:79044226-79044245 | MsG0380016091.01.T01:intron | 45.0% | |
| ATTGAACCCGAGACCTTATG+GGG | - | Chr3:79043801-79043820 | None:intergenic | 45.0% | |
| CGGACTTAATACGACGAAGA+AGG | - | Chr3:79043273-79043292 | None:intergenic | 45.0% | |
| CGTCTTCCTCAAGGTAAAGA+AGG | - | Chr3:79044733-79044752 | None:intergenic | 45.0% | |
| GAATTGAACCCGAGACCTTA+TGG | - | Chr3:79043803-79043822 | None:intergenic | 45.0% | |
| GACCATTCACATAGTGATGG+CGG | - | Chr3:79044809-79044828 | None:intergenic | 45.0% | |
| GGTAAAATTGTCGTCGTTGC+AGG | + | Chr3:79044487-79044506 | MsG0380016091.01.T01:CDS | 45.0% | |
| GTACCTGCCGTTATCAACTT+CGG | - | Chr3:79043293-79043312 | None:intergenic | 45.0% | |
| TACTATGTCAGTGACGTGGT+TGG | + | Chr3:79044225-79044244 | MsG0380016091.01.T01:intron | 45.0% | |
| TCTCACTCTCACTCATCATC+CGG | + | Chr3:79043199-79043218 | MsG0380016091.01.T01:CDS | 45.0% | |
| TGGTTCTTCAGGAGAAGCTT+TGG | + | Chr3:79044630-79044649 | MsG0380016091.01.T01:intron | 45.0% | |
| ! | GCTGTCAAGAAGTGTGTCTT+CGG | + | Chr3:79044843-79044862 | MsG0380016091.01.T01:CDS | 45.0% |
| ! | TTTGGAGTGTGATCCCCATA+AGG | + | Chr3:79043785-79043804 | MsG0380016091.01.T01:intron | 45.0% |
| !! | GTCGTTTTGCCAGCAAACAT+GGG | - | Chr3:79043247-79043266 | None:intergenic | 45.0% |
| !!! | AGACGAGGCTCAGTTTTTTG+AGG | + | Chr3:79044426-79044445 | MsG0380016091.01.T01:CDS | 45.0% |
| !!! | TGTCGTTTTGCCAGCAAACA+TGG | - | Chr3:79043248-79043267 | None:intergenic | 45.0% |
| AACGCGCCTTCTTTACCTTG+AGG | + | Chr3:79044724-79044743 | MsG0380016091.01.T01:CDS | 50.0% | |
| AACTGGGGCTGCCTCAATAA+GGG | - | Chr3:79044892-79044911 | None:intergenic | 50.0% | |
| AATTGGGCTCCACAAGTGGA+CGG | + | Chr3:79043868-79043887 | MsG0380016091.01.T01:intron | 50.0% | |
| ACATGGGACCCACAAAGAGA+TGG | - | Chr3:79043231-79043250 | None:intergenic | 50.0% | |
| ACCACAAGGTCAACCCAAGT+GGG | - | Chr3:79043752-79043771 | None:intergenic | 50.0% | |
| ACTCTGTTGTGACCCATGAC+GGG | + | Chr3:79043485-79043504 | MsG0380016091.01.T01:CDS | 50.0% | |
| CAAATCTGGCAATGCCCAAC+AGG | - | Chr3:79043521-79043540 | None:intergenic | 50.0% | |
| CACAAAGAGATGGATCTCGC+CGG | - | Chr3:79043221-79043240 | None:intergenic | 50.0% | |
| CAGCTCGTTGTGAACTATGC+GGG | + | Chr3:79044700-79044719 | MsG0380016091.01.T01:CDS | 50.0% | |
| CCAATCTAACCGTCCACTTG+TGG | - | Chr3:79043880-79043899 | None:intergenic | 50.0% | |
| CCACAAGTGGACGGTTAGAT+TGG | + | Chr3:79043877-79043896 | MsG0380016091.01.T01:intron | 50.0% | |
| CCTAAGGACCGATTAATCCG+AGG | - | Chr3:79043906-79043925 | None:intergenic | 50.0% | |
| CCTCGGATTAATCGGTCCTT+AGG | + | Chr3:79043903-79043922 | MsG0380016091.01.T01:intron | 50.0% | |
| CGGTCATGAGGCCTATCAAA+AGG | + | Chr3:79043561-79043580 | MsG0380016091.01.T01:CDS | 50.0% | |
| CTATGTCAGTGACGTGGTTG+GGG | + | Chr3:79044227-79044246 | MsG0380016091.01.T01:intron | 50.0% | |
| GACGGTTAGATTGGACTCCT+CGG | + | Chr3:79043886-79043905 | MsG0380016091.01.T01:intron | 50.0% | |
| GACTCTGTTGTGACCCATGA+CGG | + | Chr3:79043484-79043503 | MsG0380016091.01.T01:CDS | 50.0% | |
| GCCTGGATGGTGATTACTTG+AGG | + | Chr3:79044509-79044528 | MsG0380016091.01.T01:CDS | 50.0% | |
| GGCGAGATCCATCTCTTTGT+GGG | + | Chr3:79043220-79043239 | MsG0380016091.01.T01:CDS | 50.0% | |
| GGTTCAAGGTAACCCCACTT+GGG | + | Chr3:79043736-79043755 | MsG0380016091.01.T01:intron | 50.0% | |
| GTCTCGGGTTCAATTCCTTC+CGG | + | Chr3:79043807-79043826 | MsG0380016091.01.T01:intron | 50.0% | |
| GTGTGATCCCCATAAGGTCT+CGG | + | Chr3:79043791-79043810 | MsG0380016091.01.T01:intron | 50.0% | |
| TAGCCCACCGAAATTGACAC+CGG | - | Chr3:79043829-79043848 | None:intergenic | 50.0% | |
| TGCAAGGCTGCTGATGAAGA+TGG | + | Chr3:79044466-79044485 | MsG0380016091.01.T01:CDS | 50.0% | |
| TGCCGCCATCACTATGTGAA+TGG | + | Chr3:79044804-79044823 | MsG0380016091.01.T01:CDS | 50.0% | |
| TGGTTCAAGGTAACCCCACT+TGG | + | Chr3:79043735-79043754 | MsG0380016091.01.T01:intron | 50.0% | |
| TGTGATCCCCATAAGGTCTC+GGG | + | Chr3:79043792-79043811 | MsG0380016091.01.T01:intron | 50.0% | |
| TTTCTCTCCCGTCTTCCTCA+AGG | - | Chr3:79044742-79044761 | None:intergenic | 50.0% | |
| TTTGTGGGTCCCATGTTTGC+TGG | + | Chr3:79043235-79043254 | MsG0380016091.01.T01:CDS | 50.0% | |
| ! | CGGGGCTGATTTATACATGC+CGG | + | Chr3:79044779-79044798 | MsG0380016091.01.T01:CDS | 50.0% |
| ! | CTTCCGGTGTCAATTTCGGT+GGG | + | Chr3:79043823-79043842 | MsG0380016091.01.T01:intron | 50.0% |
| !! | ACATAGTGATGGCGGCAAAC+CGG | - | Chr3:79044801-79044820 | None:intergenic | 50.0% |
| !! | AGTCCGAAGTTGATAACGGC+AGG | + | Chr3:79043287-79043306 | MsG0380016091.01.T01:CDS | 50.0% |
| !! | ATGGCTTCTTCCTTTGGGGT+TGG | + | Chr3:79043172-79043191 | MsG0380016091.01.T01:CDS | 50.0% |
| AATTGTCGTCGTTGCAGGCC+TGG | + | Chr3:79044492-79044511 | MsG0380016091.01.T01:CDS | 55.0% | |
| CAACTGGGGCTGCCTCAATA+AGG | - | Chr3:79044893-79044912 | None:intergenic | 55.0% | |
| CACCACAAGGTCAACCCAAG+TGG | - | Chr3:79043753-79043772 | None:intergenic | 55.0% | |
| CCACAAGGTCAACCCAAGTG+GGG | - | Chr3:79043751-79043770 | None:intergenic | 55.0% | |
| CCACCGAAATTGACACCGGA+AGG | - | Chr3:79043825-79043844 | None:intergenic | 55.0% | |
| CGGCGAGATCCATCTCTTTG+TGG | + | Chr3:79043219-79043238 | MsG0380016091.01.T01:CDS | 55.0% | |
| GTGAGAAGAGCCAACCCCAA+AGG | - | Chr3:79043185-79043204 | None:intergenic | 55.0% | |
| ! | CCTTCCGGTGTCAATTTCGG+TGG | + | Chr3:79043822-79043841 | MsG0380016091.01.T01:intron | 55.0% |
| !! | GGTGGGCTAGTCCATAGATC+TGG | + | Chr3:79043840-79043859 | MsG0380016091.01.T01:intron | 55.0% |
| !! | CCCCACTTGGGTTGACCTTG+TGG | + | Chr3:79043748-79043767 | MsG0380016091.01.T01:intron | 60.0% |
| GTCGTCGTTGCAGGCCTGGA+TGG | + | Chr3:79044496-79044515 | MsG0380016091.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 79043172 | 79044917 | 79043172 | ID=MsG0380016091.01;Name=MsG0380016091.01 |
| Chr3 | mRNA | 79043172 | 79044917 | 79043172 | ID=MsG0380016091.01.T01;Parent=MsG0380016091.01;Name=MsG0380016091.01.T01;_AED=0.35;_eAED=0.42;_QI=0|0|0|1|0.5|0.6|5|0|279 |
| Chr3 | exon | 79043172 | 79043308 | 79043172 | ID=MsG0380016091.01.T01:exon:17746;Parent=MsG0380016091.01.T01 |
| Chr3 | exon | 79043438 | 79043644 | 79043438 | ID=MsG0380016091.01.T01:exon:17747;Parent=MsG0380016091.01.T01 |
| Chr3 | exon | 79044236 | 79044284 | 79044236 | ID=MsG0380016091.01.T01:exon:17748;Parent=MsG0380016091.01.T01 |
| Chr3 | exon | 79044361 | 79044530 | 79044361 | ID=MsG0380016091.01.T01:exon:17749;Parent=MsG0380016091.01.T01 |
| Chr3 | exon | 79044641 | 79044917 | 79044641 | ID=MsG0380016091.01.T01:exon:17750;Parent=MsG0380016091.01.T01 |
| Chr3 | CDS | 79043172 | 79043308 | 79043172 | ID=MsG0380016091.01.T01:cds;Parent=MsG0380016091.01.T01 |
| Chr3 | CDS | 79043438 | 79043644 | 79043438 | ID=MsG0380016091.01.T01:cds;Parent=MsG0380016091.01.T01 |
| Chr3 | CDS | 79044236 | 79044284 | 79044236 | ID=MsG0380016091.01.T01:cds;Parent=MsG0380016091.01.T01 |
| Chr3 | CDS | 79044361 | 79044530 | 79044361 | ID=MsG0380016091.01.T01:cds;Parent=MsG0380016091.01.T01 |
| Chr3 | CDS | 79044641 | 79044917 | 79044641 | ID=MsG0380016091.01.T01:cds;Parent=MsG0380016091.01.T01 |
| Gene Sequence |
| Protein sequence |
