Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046906.01.T01 | XP_013458139.1 | 93.548 | 279 | 16 | 2 | 1 | 277 | 1 | 279 | 0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046906.01.T01 | Q4KLQ5 | 31.373 | 255 | 168 | 4 | 5 | 254 | 113 | 365 | 1.05E-28 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046906.01.T01 | A0A072V213 | 93.548 | 279 | 16 | 2 | 1 | 277 | 1 | 279 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048258.01 | MsG0880046906.01 | 0.807811 | 4.212606e-50 | 2.369223e-47 |
| MsG0080048289.01 | MsG0880046906.01 | 0.823491 | 1.345951e-53 | 1.160694e-50 |
| MsG0080048775.01 | MsG0880046906.01 | 0.837938 | 3.869023e-57 | 5.103858e-54 |
| MsG0080048781.01 | MsG0880046906.01 | 0.847969 | 8.258478e-60 | 1.492830e-56 |
| MsG0180001293.01 | MsG0880046906.01 | 0.877893 | 4.360735e-69 | 2.230409e-65 |
| MsG0180001719.01 | MsG0880046906.01 | 0.809127 | 2.206679e-50 | 1.284919e-47 |
| MsG0180002218.01 | MsG0880046906.01 | 0.826398 | 2.773715e-54 | 2.598266e-51 |
| MsG0180002397.01 | MsG0880046906.01 | 0.872644 | 2.714255e-67 | 1.144446e-63 |
| MsG0880044103.01 | MsG0880046906.01 | 0.858762 | 6.592939e-63 | 1.701237e-59 |
| MsG0880044437.01 | MsG0880046906.01 | 0.849474 | 3.158829e-60 | 5.994939e-57 |
| MsG0880044989.01 | MsG0880046906.01 | 0.801856 | 7.390142e-49 | 3.566920e-46 |
| MsG0880045356.01 | MsG0880046906.01 | 0.826226 | 3.047554e-54 | 2.840802e-51 |
| MsG0880045439.01 | MsG0880046906.01 | 0.891640 | 3.303935e-74 | 2.921384e-70 |
| MsG0880045584.01 | MsG0880046906.01 | 0.879322 | 1.370294e-69 | 7.397293e-66 |
| MsG0880045612.01 | MsG0880046906.01 | 0.892851 | 1.083896e-74 | 1.007758e-70 |
| MsG0880045647.01 | MsG0880046906.01 | 0.879977 | 8.015895e-70 | 4.438474e-66 |
| MsG0880046646.01 | MsG0880046906.01 | 0.808759 | 2.645293e-50 | 1.525201e-47 |
| MsG0880046904.01 | MsG0880046906.01 | 0.901764 | 1.925180e-78 | 2.639914e-74 |
| MsG0880046905.01 | MsG0880046906.01 | 0.851412 | 9.027072e-61 | 1.825738e-57 |
| MsG0880046906.01 | MsG0880047311.01 | 0.826415 | 2.747136e-54 | 2.574756e-51 |
| MsG0880046906.01 | MsG0880047640.01 | 0.838697 | 2.465653e-57 | 3.328763e-54 |
| MsG0880046906.01 | MsG0880047649.01 | 0.880240 | 6.459097e-70 | 3.611257e-66 |
| MsG0180003421.01 | MsG0880046906.01 | 0.819599 | 1.067140e-52 | 8.248849e-50 |
| MsG0180003658.01 | MsG0880046906.01 | 0.893506 | 5.898025e-75 | 5.633653e-71 |
| MsG0180003698.01 | MsG0880046906.01 | 0.847169 | 1.370700e-59 | 2.415550e-56 |
| MsG0180003796.01 | MsG0880046906.01 | 0.801265 | 9.767291e-49 | 4.644272e-46 |
| MsG0180003857.01 | MsG0880046906.01 | 0.900931 | 4.466759e-78 | 5.897506e-74 |
| MsG0180003905.01 | MsG0880046906.01 | 0.838316 | 3.090897e-57 | 4.124186e-54 |
| MsG0180004027.01 | MsG0880046906.01 | 0.803772 | 2.971514e-49 | 1.506136e-46 |
| MsG0180004120.01 | MsG0880046906.01 | 0.861521 | 9.679470e-64 | 2.746776e-60 |
| MsG0180004126.01 | MsG0880046906.01 | 0.871241 | 7.942535e-67 | 3.181036e-63 |
| MsG0180004184.01 | MsG0880046906.01 | 0.836715 | 7.956304e-57 | 1.011033e-53 |
| MsG0180004185.01 | MsG0880046906.01 | 0.881308 | 2.673400e-70 | 1.558291e-66 |
| MsG0180004299.01 | MsG0880046906.01 | 0.852895 | 3.417936e-61 | 7.250440e-58 |
| MsG0180004538.01 | MsG0880046906.01 | 0.875421 | 3.122551e-68 | 1.456864e-64 |
| MsG0180004583.01 | MsG0880046906.01 | 0.864553 | 1.119636e-64 | 3.529244e-61 |
| MsG0180004652.01 | MsG0880046906.01 | 0.829714 | 4.411052e-55 | 4.551478e-52 |
| MsG0180004828.01 | MsG0880046906.01 | 0.808954 | 2.402280e-50 | 1.392287e-47 |
| MsG0180004995.01 | MsG0880046906.01 | 0.813124 | 3.000179e-51 | 1.942403e-48 |
| MsG0180005048.01 | MsG0880046906.01 | 0.830141 | 3.469873e-55 | 3.624655e-52 |
| MsG0180005569.01 | MsG0880046906.01 | 0.817282 | 3.575109e-52 | 2.592385e-49 |
| MsG0180005655.01 | MsG0880046906.01 | 0.853699 | 2.011290e-61 | 4.383565e-58 |
| MsG0180006005.01 | MsG0880046906.01 | 0.806423 | 8.284514e-50 | 4.494877e-47 |
| MsG0180006133.01 | MsG0880046906.01 | 0.861754 | 8.215208e-64 | 2.348986e-60 |
| MsG0180006182.01 | MsG0880046906.01 | 0.808988 | 2.363239e-50 | 1.370887e-47 |
| MsG0280006398.01 | MsG0880046906.01 | 0.825181 | 5.392743e-54 | 4.879897e-51 |
| MsG0780040364.01 | MsG0880046906.01 | 0.872243 | 3.692952e-67 | 1.534269e-63 |
| MsG0780040620.01 | MsG0880046906.01 | 0.825314 | 5.015184e-54 | 4.555246e-51 |
| MsG0780040641.01 | MsG0880046906.01 | 0.870546 | 1.344619e-66 | 5.251447e-63 |
| MsG0780040671.01 | MsG0880046906.01 | 0.801476 | 8.842834e-49 | 4.227143e-46 |
| MsG0780040830.01 | MsG0880046906.01 | 0.825677 | 4.114456e-54 | 3.775877e-51 |
| MsG0780040899.01 | MsG0880046906.01 | 0.831112 | 2.008127e-55 | 2.158067e-52 |
| MsG0780040978.01 | MsG0880046906.01 | 0.849194 | 3.781608e-60 | 7.113798e-57 |
| MsG0780040990.01 | MsG0880046906.01 | 0.843415 | 1.420722e-58 | 2.221433e-55 |
| MsG0780041141.01 | MsG0880046906.01 | 0.840379 | 9.009511e-58 | 1.281036e-54 |
| MsG0780041142.01 | MsG0880046906.01 | 0.810229 | 1.278506e-50 | 7.664185e-48 |
| MsG0780041143.01 | MsG0880046906.01 | 0.815337 | 9.735108e-52 | 6.693340e-49 |
| MsG0780041219.01 | MsG0880046906.01 | 0.810209 | 1.291579e-50 | 7.738326e-48 |
| MsG0780041273.01 | MsG0880046906.01 | 0.802142 | 6.453961e-49 | 3.137702e-46 |
| MsG0780041340.01 | MsG0880046906.01 | 0.834379 | 3.100843e-56 | 3.673520e-53 |
| MsG0780041354.01 | MsG0880046906.01 | 0.818587 | 1.813852e-52 | 1.363275e-49 |
| MsG0780041359.01 | MsG0880046906.01 | 0.880057 | 7.509098e-70 | 4.170629e-66 |
| MsG0880041930.01 | MsG0880046906.01 | 0.862300 | 5.588889e-64 | 1.628742e-60 |
| MsG0880042833.01 | MsG0880046906.01 | 0.801733 | 7.834592e-49 | 3.769382e-46 |
| MsG0880043684.01 | MsG0880046906.01 | 0.850165 | 2.025502e-60 | 3.932448e-57 |
| MsG0880043714.01 | MsG0880046906.01 | 0.841245 | 5.342695e-58 | 7.802418e-55 |
| MsG0880043752.01 | MsG0880046906.01 | 0.836890 | 7.179070e-57 | 9.171238e-54 |
| MsG0280010579.01 | MsG0880046906.01 | 0.854577 | 1.122361e-61 | 2.518132e-58 |
| MsG0280011331.01 | MsG0880046906.01 | 0.840913 | 6.528351e-58 | 9.437476e-55 |
| MsG0380011846.01 | MsG0880046906.01 | 0.826930 | 2.070003e-54 | 1.969051e-51 |
| MsG0380012818.01 | MsG0880046906.01 | 0.820298 | 7.386180e-53 | 5.821560e-50 |
| MsG0380013041.01 | MsG0880046906.01 | 0.819205 | 1.312554e-52 | 1.003498e-49 |
| MsG0380013584.01 | MsG0880046906.01 | 0.836418 | 9.470240e-57 | 1.192761e-53 |
| MsG0380014542.01 | MsG0880046906.01 | 0.805012 | 1.639145e-49 | 8.577477e-47 |
| MsG0380014666.01 | MsG0880046906.01 | 0.860838 | 1.562439e-63 | 4.329917e-60 |
| MsG0380014751.01 | MsG0880046906.01 | 0.830657 | 2.595925e-55 | 2.752606e-52 |
| MsG0380014807.01 | MsG0880046906.01 | 0.864981 | 8.222398e-65 | 2.632011e-61 |
| MsG0680031006.01 | MsG0880046906.01 | 0.813772 | 2.161201e-51 | 1.424148e-48 |
| MsG0680031616.01 | MsG0880046906.01 | 0.835833 | 1.332958e-56 | 1.649393e-53 |
| MsG0680032772.01 | MsG0880046906.01 | 0.828369 | 9.342537e-55 | 9.267377e-52 |
| MsG0680033405.01 | MsG0880046906.01 | 0.827752 | 1.314879e-54 | 1.280993e-51 |
| MsG0680033696.01 | MsG0880046906.01 | 0.822220 | 2.662280e-53 | 2.214419e-50 |
| MsG0680034415.01 | MsG0880046906.01 | 0.810875 | 9.274086e-51 | 5.656113e-48 |
| MsG0680034764.01 | MsG0880046906.01 | 0.817876 | 2.627028e-52 | 1.936232e-49 |
| MsG0680035350.01 | MsG0880046906.01 | 0.848297 | 6.703130e-60 | 1.224617e-56 |
| MsG0480018526.01 | MsG0880046906.01 | 0.831343 | 1.762041e-55 | 1.906728e-52 |
| MsG0480018767.01 | MsG0880046906.01 | 0.832196 | 1.084831e-55 | 1.203844e-52 |
| MsG0480018785.01 | MsG0880046906.01 | 0.824700 | 7.002719e-54 | 6.250487e-51 |
| MsG0480020365.01 | MsG0880046906.01 | 0.827599 | 1.431551e-54 | 1.388317e-51 |
| MsG0480020398.01 | MsG0880046906.01 | 0.870168 | 1.789459e-66 | 6.893774e-63 |
| MsG0480020856.01 | MsG0880046906.01 | 0.852535 | 4.330238e-61 | 9.075931e-58 |
| MsG0480021100.01 | MsG0880046906.01 | 0.821906 | 3.147929e-53 | 2.595144e-50 |
| MsG0480021301.01 | MsG0880046906.01 | 0.848206 | 7.106526e-60 | 1.294260e-56 |
| MsG0480021773.01 | MsG0880046906.01 | 0.831629 | 1.498002e-55 | 1.634859e-52 |
| MsG0480021846.01 | MsG0880046906.01 | 0.804520 | 2.076660e-49 | 1.072953e-46 |
| MsG0480021902.01 | MsG0880046906.01 | 0.852295 | 5.070792e-61 | 1.054806e-57 |
| MsG0480022320.01 | MsG0880046906.01 | 0.826021 | 3.408604e-54 | 3.159026e-51 |
| MsG0480022559.01 | MsG0880046906.01 | 0.859718 | 3.406815e-63 | 9.084245e-60 |
| MsG0480022682.01 | MsG0880046906.01 | 0.800440 | 1.439835e-48 | 6.704619e-46 |
| MsG0480022784.01 | MsG0880046906.01 | 0.887334 | 1.563724e-72 | 1.157882e-68 |
| MsG0480022931.01 | MsG0880046906.01 | 0.801631 | 8.220504e-49 | 3.944893e-46 |
| MsG0480022991.01 | MsG0880046906.01 | 0.811500 | 6.785506e-51 | 4.207386e-48 |
| MsG0480022992.01 | MsG0880046906.01 | 0.820075 | 8.307762e-53 | 6.508294e-50 |
| MsG0480023003.01 | MsG0880046906.01 | 0.834126 | 3.588338e-56 | 4.218547e-53 |
| MsG0480023064.01 | MsG0880046906.01 | 0.813359 | 2.663420e-51 | 1.735681e-48 |
| MsG0480023296.01 | MsG0880046906.01 | 0.827408 | 1.590996e-54 | 1.534755e-51 |
| MsG0480023414.01 | MsG0880046906.01 | 0.854015 | 1.631099e-61 | 3.592643e-58 |
| MsG0480023424.01 | MsG0880046906.01 | 0.838435 | 2.881599e-57 | 3.859402e-54 |
| MsG0480023426.01 | MsG0880046906.01 | 0.834076 | 3.694311e-56 | 4.336525e-53 |
| MsG0480023484.01 | MsG0880046906.01 | 0.882159 | 1.316071e-70 | 7.928867e-67 |
| MsG0480023653.01 | MsG0880046906.01 | 0.842775 | 2.105037e-58 | 3.225249e-55 |
| MsG0480023672.01 | MsG0880046906.01 | 0.817235 | 3.663018e-52 | 2.652794e-49 |
| MsG0480023706.01 | MsG0880046906.01 | 0.918771 | 1.032463e-86 | 3.198728e-82 |
| MsG0480023944.01 | MsG0880046906.01 | 0.843459 | 1.383215e-58 | 2.165601e-55 |
| MsG0480024002.01 | MsG0880046906.01 | 0.813772 | 2.160793e-51 | 1.423890e-48 |
| MsG0580024657.01 | MsG0880046906.01 | 0.815126 | 1.084324e-51 | 7.411982e-49 |
| MsG0580024742.01 | MsG0880046906.01 | 0.814427 | 1.549333e-51 | 1.039307e-48 |
| MsG0580024787.01 | MsG0880046906.01 | 0.870027 | 1.988909e-66 | 7.623821e-63 |
| MsG0580024813.01 | MsG0880046906.01 | 0.841921 | 3.543917e-58 | 5.286265e-55 |
| MsG0580024954.01 | MsG0880046906.01 | 0.834523 | 2.853990e-56 | 3.395777e-53 |
| MsG0580025093.01 | MsG0880046906.01 | 0.831283 | 1.822680e-55 | 1.968695e-52 |
| MsG0580025177.01 | MsG0880046906.01 | 0.847832 | 9.011670e-60 | 1.621980e-56 |
| MsG0580025186.01 | MsG0880046906.01 | 0.848647 | 5.364509e-60 | 9.910946e-57 |
| MsG0580025504.01 | MsG0880046906.01 | 0.831998 | 1.214523e-55 | 1.340097e-52 |
| MsG0580025775.01 | MsG0880046906.01 | 0.800180 | 1.626231e-48 | 7.522662e-46 |
| MsG0380015219.01 | MsG0880046906.01 | 0.861642 | 8.886723e-64 | 2.531527e-60 |
| MsG0380015340.01 | MsG0880046906.01 | 0.829311 | 5.525272e-55 | 5.635156e-52 |
| MsG0380015371.01 | MsG0880046906.01 | 0.822159 | 2.749016e-53 | 2.282626e-50 |
| MsG0380015394.01 | MsG0880046906.01 | 0.862237 | 5.843351e-64 | 1.699358e-60 |
| MsG0380015871.01 | MsG0880046906.01 | 0.823763 | 1.162473e-53 | 1.010288e-50 |
| MsG0380015954.01 | MsG0880046906.01 | 0.855693 | 5.316359e-62 | 1.237865e-58 |
| MsG0380016027.01 | MsG0880046906.01 | 0.800125 | 1.668715e-48 | 7.708582e-46 |
| MsG0380016051.01 | MsG0880046906.01 | 0.842760 | 2.124347e-58 | 3.253177e-55 |
| MsG0380016091.01 | MsG0880046906.01 | 0.890118 | 1.315481e-73 | 1.091555e-69 |
| MsG0380016092.01 | MsG0880046906.01 | 0.844598 | 6.848527e-59 | 1.111219e-55 |
| MsG0380016217.01 | MsG0880046906.01 | 0.906479 | 1.419450e-80 | 2.408780e-76 |
| MsG0380016225.01 | MsG0880046906.01 | 0.865446 | 5.870603e-65 | 1.910629e-61 |
| MsG0380016722.01 | MsG0880046906.01 | 0.812565 | 3.978008e-51 | 2.537751e-48 |
| MsG0380016856.01 | MsG0880046906.01 | 0.850503 | 1.628068e-60 | 3.195469e-57 |
| MsG0380017128.01 | MsG0880046906.01 | 0.845588 | 3.699209e-59 | 6.193858e-56 |
| MsG0380017181.01 | MsG0880046906.01 | 0.826799 | 2.224758e-54 | 2.107996e-51 |
| MsG0380017331.01 | MsG0880046906.01 | 0.810877 | 9.265236e-51 | 5.651060e-48 |
| MsG0380017332.01 | MsG0880046906.01 | 0.868849 | 4.807514e-66 | 1.765302e-62 |
| MsG0380017361.01 | MsG0880046906.01 | 0.816677 | 4.888113e-52 | 3.486266e-49 |
| MsG0380017588.01 | MsG0880046906.01 | 0.841265 | 5.276440e-58 | 7.710911e-55 |
| MsG0380017605.01 | MsG0880046906.01 | 0.879000 | 1.781030e-69 | 9.498577e-66 |
| MsG0380017632.01 | MsG0880046906.01 | 0.820965 | 5.189339e-53 | 4.167057e-50 |
| MsG0480018228.01 | MsG0880046906.01 | 0.858281 | 9.174115e-63 | 2.329186e-59 |
| MsG0580026343.01 | MsG0880046906.01 | 0.809106 | 2.229095e-50 | 1.297247e-47 |
| MsG0580026446.01 | MsG0880046906.01 | 0.802385 | 5.752287e-49 | 2.814144e-46 |
| MsG0580028756.01 | MsG0880046906.01 | 0.830264 | 3.238418e-55 | 3.394895e-52 |
| MsG0580028923.01 | MsG0880046906.01 | 0.816923 | 4.304336e-52 | 3.090843e-49 |
| MsG0580028927.01 | MsG0880046906.01 | 0.844005 | 9.878430e-59 | 1.573414e-55 |
| MsG0580028955.01 | MsG0880046906.01 | 0.831137 | 1.979023e-55 | 2.128472e-52 |
| MsG0580029123.01 | MsG0880046906.01 | 0.800124 | 1.669373e-48 | 7.711454e-46 |
| MsG0580029197.01 | MsG0880046906.01 | 0.847972 | 8.243696e-60 | 1.490273e-56 |
| MsG0580029261.01 | MsG0880046906.01 | 0.816421 | 5.578767e-52 | 3.951057e-49 |
| MsG0580029591.01 | MsG0880046906.01 | 0.855839 | 4.820116e-62 | 1.127719e-58 |
| MsG0280006563.01 | MsG0880046906.01 | 0.844612 | 6.787105e-59 | 1.101736e-55 |
| MsG0280007003.01 | MsG0880046906.01 | 0.879504 | 1.180366e-69 | 6.415046e-66 |
| MsG0280007419.01 | MsG0880046906.01 | 0.840467 | 8.546627e-58 | 1.218494e-54 |
| MsG0280007667.01 | MsG0880046906.01 | 0.831610 | 1.514366e-55 | 1.651840e-52 |
| MsG0280009216.01 | MsG0880046906.01 | 0.817297 | 3.548287e-52 | 2.574002e-49 |
| MsG0280009866.01 | MsG0880046906.01 | 0.824930 | 6.181504e-54 | 5.553735e-51 |
| MsG0680035776.01 | MsG0880046906.01 | 0.861319 | 1.115578e-63 | 3.144079e-60 |
| MsG0780036534.01 | MsG0880046906.01 | 0.823412 | 1.404476e-53 | 1.208297e-50 |
| MsG0780037741.01 | MsG0880046906.01 | 0.821599 | 3.707156e-53 | 3.029410e-50 |
| MsG0780038393.01 | MsG0880046906.01 | 0.862815 | 3.880009e-64 | 1.151599e-60 |
| MsG0780038402.01 | MsG0880046906.01 | 0.826696 | 2.354190e-54 | 2.224061e-51 |
| MsG0780038445.01 | MsG0880046906.01 | 0.841451 | 4.714453e-58 | 6.930661e-55 |
| MsG0780038736.01 | MsG0880046906.01 | 0.857033 | 2.149514e-62 | 5.233222e-59 |
| MsG0780039861.01 | MsG0880046906.01 | 0.814597 | 1.420985e-51 | 9.575696e-49 |
| MsG0780040118.01 | MsG0880046906.01 | 0.806236 | 9.070982e-50 | 4.898501e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046906.01.T01 | MTR_4g116900 | 93.548 | 279 | 16 | 2 | 1 | 277 | 1 | 279 | 0.0 | 531 |
| MsG0880046906.01.T01 | MTR_4g116910 | 61.938 | 289 | 72 | 11 | 3 | 277 | 4 | 268 | 1.84e-109 | 325 |
| MsG0880046906.01.T01 | MTR_5g067190 | 75.556 | 45 | 10 | 1 | 222 | 266 | 2 | 45 | 1.36e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046906.01.T01 | AT1G80710 | 39.521 | 334 | 136 | 9 | 7 | 277 | 3 | 333 | 1.60e-59 | 199 |
Find 89 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACTTTCAGGTGCGGTTTC+TGG | -0.002108 | 8:-79743106 | MsG0880046906.01.T01:CDS |
| CCACATCAGGCTCCTATTTC+TGG | 0.092960 | 8:-79744390 | MsG0880046906.01.T01:CDS |
| AGAAGATAAAAGAGGAAATT+AGG | 0.129591 | 8:+79745116 | None:intergenic |
| TGAGTTGGAATCTTTGAATT+TGG | 0.175533 | 8:-79744562 | MsG0880046906.01.T01:CDS |
| GAAGATGGATTTCGACTTTC+AGG | 0.196405 | 8:-79743118 | MsG0880046906.01.T01:CDS |
| AACAATTGGGGTTTCAGTTT+TGG | 0.223709 | 8:+79744839 | None:intergenic |
| GGGAACAAATTCGGGGATAT+TGG | 0.240155 | 8:-79744453 | MsG0880046906.01.T01:CDS |
| GACTTTCAGGTGCGGTTTCT+GGG | 0.247904 | 8:-79743105 | MsG0880046906.01.T01:CDS |
| CGCATTTGGGTTATCCTTCC+AGG | 0.267384 | 8:+79744513 | None:intergenic |
| TAGCAGCGGGGAACAAATTC+GGG | 0.278266 | 8:-79744461 | MsG0880046906.01.T01:CDS |
| AAAAGAGGAAATTAGGGATT+TGG | 0.280553 | 8:+79745123 | None:intergenic |
| AAACAGTTAGCCTCATTCTT+TGG | 0.287246 | 8:+79743725 | None:intergenic |
| TGGAAGGGCAAAACCGCATT+TGG | 0.290371 | 8:+79744499 | None:intergenic |
| TGATGATGTTGTTCAAAATC+TGG | 0.296005 | 8:-79744727 | MsG0880046906.01.T01:CDS |
| GAAGATAAAAGAGGAAATTA+GGG | 0.311674 | 8:+79745117 | None:intergenic |
| GAATCAGAGCCTTTGGAATC+TGG | 0.340425 | 8:+79744783 | None:intergenic |
| GGAACAAATTCGGGGATATT+GGG | 0.342079 | 8:-79744452 | MsG0880046906.01.T01:CDS |
| CGATTTCACAGTATACGATT+TGG | 0.344728 | 8:+79744872 | None:intergenic |
| GTAGCAGCGGGGAACAAATT+CGG | 0.348233 | 8:-79744462 | MsG0880046906.01.T01:CDS |
| TGAAACAAGATCCCAGAAAT+AGG | 0.357504 | 8:+79744378 | None:intergenic |
| TTCTTCTGAAAATTCCTTGT+TGG | 0.359136 | 8:+79744626 | None:intergenic |
| CCCATGAAAGATGCTTATAA+AGG | 0.372891 | 8:-79744696 | MsG0880046906.01.T01:CDS |
| GCCTTTATAAGCATCTTTCA+TGG | 0.378659 | 8:+79744695 | None:intergenic |
| CTCACTATTCCAATTCAATT+CGG | 0.383067 | 8:-79745151 | MsG0880046906.01.T01:five_prime_UTR |
| TGATGGACTTATTCGATTGA+TGG | 0.384074 | 8:-79743813 | MsG0880046906.01.T01:CDS |
| AGTGTTAGAATCAGAGCCTT+TGG | 0.388291 | 8:+79744776 | None:intergenic |
| TAAGCATCTTTCATGGGAAT+AGG | 0.391292 | 8:+79744702 | None:intergenic |
| AATGGAGAGTTCGGTGGCTT+TGG | 0.393282 | 8:+79744997 | None:intergenic |
| AATTCGGGGATATTGGGTTC+TGG | 0.398791 | 8:-79744446 | MsG0880046906.01.T01:CDS |
| AGTGAGCGTCTGATAACAAT+TGG | 0.404783 | 8:+79744825 | None:intergenic |
| TGAGAAGGAAATATTTGATA+TGG | 0.409089 | 8:-79743786 | MsG0880046906.01.T01:CDS |
| AATTGAGTGTTCACTTGAGT+TGG | 0.413577 | 8:-79744577 | MsG0880046906.01.T01:CDS |
| CAAATCGTATACTGTGAAAT+CGG | 0.424791 | 8:-79744871 | MsG0880046906.01.T01:CDS |
| GGAAGGGCAAAACCGCATTT+GGG | 0.429167 | 8:+79744500 | None:intergenic |
| GAAAGTCGAAATCCATCTTC+CGG | 0.433669 | 8:+79743121 | None:intergenic |
| CACATCAGGCTCCTATTTCT+GGG | 0.434666 | 8:-79744389 | MsG0880046906.01.T01:CDS |
| GGAATCTTTGAATTTGGATC+CGG | 0.442264 | 8:-79744556 | MsG0880046906.01.T01:CDS |
| CCCTTCCAATGATGTTAAGA+TGG | 0.443994 | 8:-79744484 | MsG0880046906.01.T01:CDS |
| TGCTACCATCTTAACATCAT+TGG | 0.445194 | 8:+79744479 | None:intergenic |
| AATATCGCACGTGTTGTTCC+TGG | 0.445323 | 8:-79744531 | MsG0880046906.01.T01:CDS |
| GGAATCTGGTGGAATACCTC+TGG | 0.457148 | 8:+79744797 | None:intergenic |
| TATATACAGTGGAGTTAACT+TGG | 0.462698 | 8:-79743177 | MsG0880046906.01.T01:CDS |
| GTGAGCGTCTGATAACAATT+GGG | 0.470746 | 8:+79744826 | None:intergenic |
| TGTAGCCTGGACAACACTAT+TGG | 0.471622 | 8:-79743200 | MsG0880046906.01.T01:intron |
| GATATTGGGTTCTGGAATGT+TGG | 0.476414 | 8:-79744438 | MsG0880046906.01.T01:CDS |
| GGTCTGATTGTCATGATAAA+CGG | 0.477120 | 8:+79743142 | None:intergenic |
| TTATAAAGGCGATGATGATT+CGG | 0.486557 | 8:-79744682 | MsG0880046906.01.T01:CDS |
| AAAAGAATACTTGGGACGAA+TGG | 0.495955 | 8:+79744979 | None:intergenic |
| CCTTTATAAGCATCTTTCAT+GGG | 0.502905 | 8:+79744696 | None:intergenic |
| TCGATTGATGGATGCTGAGA+AGG | 0.505059 | 8:-79743801 | MsG0880046906.01.T01:CDS |
| AACTGTTTATATTTCGCTGA+GGG | 0.508414 | 8:-79743710 | MsG0880046906.01.T01:intron |
| CTTGGGACGAATGGAGAGTT+CGG | 0.508584 | 8:+79744988 | None:intergenic |
| CGGCCATCATTTCATTGTTG+CGG | 0.516632 | 8:+79745035 | None:intergenic |
| ATGACAATCAGACCGGAAGA+TGG | 0.524412 | 8:-79743133 | MsG0880046906.01.T01:CDS |
| ATATACCAATAGTGTTGTCC+AGG | 0.531302 | 8:+79743195 | None:intergenic |
| ATATACACAAGTTGTTATGA+TGG | 0.537768 | 8:-79743830 | MsG0880046906.01.T01:CDS |
| TCTTTCATTGAATCACTCGT+TGG | 0.538065 | 8:-79744654 | MsG0880046906.01.T01:CDS |
| TCGCCGCAACAATGAAATGA+TGG | 0.543191 | 8:-79745038 | MsG0880046906.01.T01:CDS |
| GATGATGTTGTTCAAAATCT+GGG | 0.544164 | 8:-79744726 | MsG0880046906.01.T01:CDS |
| GATGTTAAGATGGTAGCAGC+GGG | 0.546408 | 8:-79744474 | MsG0880046906.01.T01:CDS |
| ACCATCTTAACATCATTGGA+AGG | 0.559963 | 8:+79744483 | None:intergenic |
| CACAGTATACGATTTGGTAA+CGG | 0.567926 | 8:+79744878 | None:intergenic |
| CATTAAAGAGAAGATAAAAG+AGG | 0.572803 | 8:+79745108 | None:intergenic |
| TCAACCGCATTGCTTATCAA+AGG | 0.576135 | 8:-79744358 | MsG0880046906.01.T01:intron |
| GTTTATCATGACAATCAGAC+CGG | 0.602016 | 8:-79743140 | MsG0880046906.01.T01:CDS |
| TCGTACTCAGTGAGTTTCTG+AGG | 0.602589 | 8:+79745082 | None:intergenic |
| TCAGAGCCTTTGGAATCTGG+TGG | 0.611319 | 8:+79744786 | None:intergenic |
| CGAGTGATTCAATGAAAGAA+CGG | 0.613172 | 8:+79744658 | None:intergenic |
| ACTTTCAGGTGCGGTTTCTG+GGG | 0.613368 | 8:-79743104 | MsG0880046906.01.T01:CDS |
| TCTCTCACATCCAAAGAATG+AGG | 0.616628 | 8:-79743735 | MsG0880046906.01.T01:CDS |
| TGAGCGTCTGATAACAATTG+GGG | 0.620630 | 8:+79744827 | None:intergenic |
| AACACTATTGGTATATACAG+TGG | 0.628310 | 8:-79743188 | MsG0880046906.01.T01:CDS |
| TGATGTTAAGATGGTAGCAG+CGG | 0.630302 | 8:-79744475 | MsG0880046906.01.T01:CDS |
| ATACAGTGGAGTTAACTTGG+AGG | 0.630978 | 8:-79743174 | MsG0880046906.01.T01:CDS |
| CCATCTTAACATCATTGGAA+GGG | 0.641113 | 8:+79744484 | None:intergenic |
| TCGCACGTGTTGTTCCTGGA+AGG | 0.643299 | 8:-79744527 | MsG0880046906.01.T01:CDS |
| CCAGAAATAGGAGCCTGATG+TGG | 0.643342 | 8:+79744390 | None:intergenic |
| TAACTGTTTATATTTCGCTG+AGG | 0.645770 | 8:-79743711 | MsG0880046906.01.T01:CDS |
| AGCAGCGGGGAACAAATTCG+GGG | 0.651952 | 8:-79744460 | MsG0880046906.01.T01:CDS |
| GGGACGAATGGAGAGTTCGG+TGG | 0.653277 | 8:+79744991 | None:intergenic |
| TTTGGTGTGAACTTTGAGAG+CGG | 0.670301 | 8:+79745015 | None:intergenic |
| GGTATTCCACCAGATTCCAA+AGG | 0.670976 | 8:-79744792 | MsG0880046906.01.T01:CDS |
| CTGGAAGGATAACCCAAATG+CGG | 0.678427 | 8:-79744512 | MsG0880046906.01.T01:CDS |
| TGGATTTCGACTTTCAGGTG+CGG | 0.682017 | 8:-79743113 | MsG0880046906.01.T01:CDS |
| AGACGCTCACTTCGAACCAG+AGG | 0.684951 | 8:-79744813 | MsG0880046906.01.T01:CDS |
| ATATTTGATATGGTATACAA+CGG | 0.688848 | 8:-79743776 | MsG0880046906.01.T01:CDS |
| CAAACCTTTGATAAGCAATG+CGG | 0.698344 | 8:+79744354 | None:intergenic |
| ACTCGTTGGTATGTCCAACA+AGG | 0.708114 | 8:-79744640 | MsG0880046906.01.T01:CDS |
| ATGTTAAGATGGTAGCAGCG+GGG | 0.764345 | 8:-79744473 | MsG0880046906.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTATAATAATTTAGAAA+AGG | - | Chr8:79744104-79744123 | MsG0880046906.01.T01:intron | 10.0% |
| !! | GAATCACAAAAAAAAAAATT+TGG | + | Chr8:79744956-79744975 | None:intergenic | 15.0% |
| !!! | ATTGTAACTCATTTTAAATA+TGG | + | Chr8:79744861-79744880 | None:intergenic | 15.0% |
| !! | AAAGAAGAAAAAAGAATACT+TGG | + | Chr8:79743277-79743296 | None:intergenic | 20.0% |
| !! | AAGAAGAAAAAAGAATACTT+GGG | + | Chr8:79743276-79743295 | None:intergenic | 20.0% |
| !! | ATATTTGATATGGTATACAA+CGG | - | Chr8:79744468-79744487 | MsG0880046906.01.T01:CDS | 20.0% |
| !! | ATTCATAATTATAATGAGCT+TGG | - | Chr8:79744972-79744991 | MsG0880046906.01.T01:intron | 20.0% |
| !! | TGGTATTAAAAATGAAACAA+AGG | + | Chr8:79744830-79744849 | None:intergenic | 20.0% |
| !!! | AACATCATCAATTTTTTTGA+GGG | + | Chr8:79743507-79743526 | None:intergenic | 20.0% |
| !!! | AATTTTCAGAAGAACTTAAT+GGG | - | Chr8:79743627-79743646 | MsG0880046906.01.T01:intron | 20.0% |
| !!! | TTCATTTTTTTGAATTCACA+GGG | - | Chr8:79743343-79743362 | MsG0880046906.01.T01:intron | 20.0% |
| !!! | TTTCATTTTTTTGAATTCAC+AGG | - | Chr8:79743342-79743361 | MsG0880046906.01.T01:intron | 20.0% |
| !!! | TTTTATTGTTGTGAATTTGA+TGG | - | Chr8:79744998-79745017 | MsG0880046906.01.T01:CDS | 20.0% |
| ! | AGAAGATAAAAGAGGAAATT+AGG | + | Chr8:79743131-79743150 | None:intergenic | 25.0% |
| ! | ATATACACAAGTTGTTATGA+TGG | - | Chr8:79744414-79744433 | MsG0880046906.01.T01:CDS | 25.0% |
| ! | ATCAAATAACAATAAGTACC+AGG | + | Chr8:79744906-79744925 | None:intergenic | 25.0% |
| ! | CATTAAAGAGAAGATAAAAG+AGG | + | Chr8:79743139-79743158 | None:intergenic | 25.0% |
| ! | CTACTTACAAAAATACGTAA+GGG | + | Chr8:79744355-79744374 | None:intergenic | 25.0% |
| ! | GAAGATAAAAGAGGAAATTA+GGG | + | Chr8:79743130-79743149 | None:intergenic | 25.0% |
| ! | TGAGAAGGAAATATTTGATA+TGG | - | Chr8:79744458-79744477 | MsG0880046906.01.T01:CDS | 25.0% |
| !! | CTCTTTTATCTTCTCTTTAA+TGG | - | Chr8:79743137-79743156 | MsG0880046906.01.T01:CDS | 25.0% |
| !! | GAATTTTCAGAAGAACTTAA+TGG | - | Chr8:79743626-79743645 | MsG0880046906.01.T01:intron | 25.0% |
| !! | TTTTAAATATGGAGAGATAG+TGG | + | Chr8:79744850-79744869 | None:intergenic | 25.0% |
| !!! | CAACATCATCAATTTTTTTG+AGG | + | Chr8:79743508-79743527 | None:intergenic | 25.0% |
| AAAAGAGGAAATTAGGGATT+TGG | + | Chr8:79743124-79743143 | None:intergenic | 30.0% | |
| AACACTATTGGTATATACAG+TGG | - | Chr8:79745056-79745075 | MsG0880046906.01.T01:CDS | 30.0% | |
| AACTGTTTATATTTCGCTGA+GGG | - | Chr8:79744534-79744553 | MsG0880046906.01.T01:CDS | 30.0% | |
| CAAATCGTATACTGTGAAAT+CGG | - | Chr8:79743373-79743392 | MsG0880046906.01.T01:intron | 30.0% | |
| CCTTTATAAGCATCTTTCAT+GGG | + | Chr8:79743551-79743570 | None:intergenic | 30.0% | |
| CTCACTATTCCAATTCAATT+CGG | - | Chr8:79743093-79743112 | MsG0880046906.01.T01:CDS | 30.0% | |
| GATGATGTTGTTCAAAATCT+GGG | - | Chr8:79743518-79743537 | MsG0880046906.01.T01:intron | 30.0% | |
| GCTACTTACAAAAATACGTA+AGG | + | Chr8:79744356-79744375 | None:intergenic | 30.0% | |
| TAACTAACTGCTTCAGAAAT+CGG | + | Chr8:79743929-79743948 | None:intergenic | 30.0% | |
| TAACTGTTTATATTTCGCTG+AGG | - | Chr8:79744533-79744552 | MsG0880046906.01.T01:CDS | 30.0% | |
| TATATACAGTGGAGTTAACT+TGG | - | Chr8:79745067-79745086 | MsG0880046906.01.T01:CDS | 30.0% | |
| TTATAAAGGCGATGATGATT+CGG | - | Chr8:79743562-79743581 | MsG0880046906.01.T01:intron | 30.0% | |
| ! | TATGTTTGGATGAAGGTTTT+TGG | + | Chr8:79744141-79744160 | None:intergenic | 30.0% |
| ! | TGAGTTGGAATCTTTGAATT+TGG | - | Chr8:79743682-79743701 | MsG0880046906.01.T01:intron | 30.0% |
| ! | TGATGATGTTGTTCAAAATC+TGG | - | Chr8:79743517-79743536 | MsG0880046906.01.T01:intron | 30.0% |
| ! | TTCTTCTGAAAATTCCTTGT+TGG | + | Chr8:79743621-79743640 | None:intergenic | 30.0% |
| !! | TTGGTTTTTCCGAATTGAAT+TGG | + | Chr8:79743105-79743124 | None:intergenic | 30.0% |
| !!! | TTTTTTGTATCATCCACATC+AGG | - | Chr8:79743841-79743860 | MsG0880046906.01.T01:intron | 30.0% |
| AAAAGAATACTTGGGACGAA+TGG | + | Chr8:79743268-79743287 | None:intergenic | 35.0% | |
| AACTGGTAGCTACAATATGA+GGG | + | Chr8:79744661-79744680 | None:intergenic | 35.0% | |
| AATGGGATTTGCATGAAAGT+AGG | - | Chr8:79744606-79744625 | MsG0880046906.01.T01:CDS | 35.0% | |
| AATTGAGTGTTCACTTGAGT+TGG | - | Chr8:79743667-79743686 | MsG0880046906.01.T01:intron | 35.0% | |
| ACCATCTTAACATCATTGGA+AGG | + | Chr8:79743764-79743783 | None:intergenic | 35.0% | |
| ACTTTCATGCAAATCCCATT+GGG | + | Chr8:79744606-79744625 | None:intergenic | 35.0% | |
| ATATACCAATAGTGTTGTCC+AGG | + | Chr8:79745052-79745071 | None:intergenic | 35.0% | |
| CAAACCTTTGATAAGCAATG+CGG | + | Chr8:79743893-79743912 | None:intergenic | 35.0% | |
| CCATCTTAACATCATTGGAA+GGG | + | Chr8:79743763-79743782 | None:intergenic | 35.0% | |
| CCCATGAAAGATGCTTATAA+AGG | - | Chr8:79743548-79743567 | MsG0880046906.01.T01:intron | 35.0% | |
| CGAGTGATTCAATGAAAGAA+CGG | + | Chr8:79743589-79743608 | None:intergenic | 35.0% | |
| CGATTTCACAGTATACGATT+TGG | + | Chr8:79743375-79743394 | None:intergenic | 35.0% | |
| GCCTTTATAAGCATCTTTCA+TGG | + | Chr8:79743552-79743571 | None:intergenic | 35.0% | |
| GGAATCTTTGAATTTGGATC+CGG | - | Chr8:79743688-79743707 | MsG0880046906.01.T01:intron | 35.0% | |
| GGTCTGATTGTCATGATAAA+CGG | + | Chr8:79745105-79745124 | None:intergenic | 35.0% | |
| GTTTATCATGACAATCAGAC+CGG | - | Chr8:79745104-79745123 | MsG0880046906.01.T01:exon | 35.0% | |
| TAAGCATCTTTCATGGGAAT+AGG | + | Chr8:79743545-79743564 | None:intergenic | 35.0% | |
| TACTTTCATGCAAATCCCAT+TGG | + | Chr8:79744607-79744626 | None:intergenic | 35.0% | |
| TCTTTCATTGAATCACTCGT+TGG | - | Chr8:79743590-79743609 | MsG0880046906.01.T01:intron | 35.0% | |
| TGAAACAAGATCCCAGAAAT+AGG | + | Chr8:79743869-79743888 | None:intergenic | 35.0% | |
| TGCTACCATCTTAACATCAT+TGG | + | Chr8:79743768-79743787 | None:intergenic | 35.0% | |
| TTGAGGACATTTACTCACAA+AGG | - | Chr8:79744743-79744762 | MsG0880046906.01.T01:CDS | 35.0% | |
| TTTGTGAGTAAATGTCCTCA+AGG | + | Chr8:79744744-79744763 | None:intergenic | 35.0% | |
| ! | AAAATACGTAAGGGTGTGTT+TGG | + | Chr8:79744346-79744365 | None:intergenic | 35.0% |
| ! | AAACAGTTAGCCTCATTCTT+TGG | + | Chr8:79744522-79744541 | None:intergenic | 35.0% |
| ! | AACAATTGGGGTTTCAGTTT+TGG | + | Chr8:79743408-79743427 | None:intergenic | 35.0% |
| ! | ACAATTGGGGTTTCAGTTTT+GGG | + | Chr8:79743407-79743426 | None:intergenic | 35.0% |
| ! | TCAAAACGTAAGGGTATGTT+TGG | + | Chr8:79744155-79744174 | None:intergenic | 35.0% |
| ! | TGTGTTTGGATGAAGGTTTT+TGG | + | Chr8:79744332-79744351 | None:intergenic | 35.0% |
| !! | CACAGTATACGATTTGGTAA+CGG | + | Chr8:79743369-79743388 | None:intergenic | 35.0% |
| !! | TGATGGACTTATTCGATTGA+TGG | - | Chr8:79744431-79744450 | MsG0880046906.01.T01:CDS | 35.0% |
| ACTCAGTGCTTCAAAACGTA+AGG | + | Chr8:79744165-79744184 | None:intergenic | 40.0% | |
| AGTGAGCGTCTGATAACAAT+TGG | + | Chr8:79743422-79743441 | None:intergenic | 40.0% | |
| AGTGTTAGAATCAGAGCCTT+TGG | + | Chr8:79743471-79743490 | None:intergenic | 40.0% | |
| CCCTTCCAATGATGTTAAGA+TGG | - | Chr8:79743760-79743779 | MsG0880046906.01.T01:CDS | 40.0% | |
| CTCAGTGCTTCAAAACGTAA+GGG | + | Chr8:79744164-79744183 | None:intergenic | 40.0% | |
| GAAAGTCGAAATCCATCTTC+CGG | + | Chr8:79745126-79745145 | None:intergenic | 40.0% | |
| GAACTGGTAGCTACAATATG+AGG | + | Chr8:79744662-79744681 | None:intergenic | 40.0% | |
| GAAGCAGTTAGTTATCTTCG+TGG | - | Chr8:79743935-79743954 | MsG0880046906.01.T01:intron | 40.0% | |
| GCATCCAGAAGGAGAAAAAT+AGG | + | Chr8:79744782-79744801 | None:intergenic | 40.0% | |
| GGAACAAATTCGGGGATATT+GGG | - | Chr8:79743792-79743811 | MsG0880046906.01.T01:CDS | 40.0% | |
| GTGAGCGTCTGATAACAATT+GGG | + | Chr8:79743421-79743440 | None:intergenic | 40.0% | |
| TCAACCGCATTGCTTATCAA+AGG | - | Chr8:79743886-79743905 | MsG0880046906.01.T01:intron | 40.0% | |
| TCGTGGATAGTATGTTTGCA+TGG | - | Chr8:79743952-79743971 | MsG0880046906.01.T01:intron | 40.0% | |
| TCTCTCACATCCAAAGAATG+AGG | - | Chr8:79744509-79744528 | MsG0880046906.01.T01:CDS | 40.0% | |
| TGAGCGTCTGATAACAATTG+GGG | + | Chr8:79743420-79743439 | None:intergenic | 40.0% | |
| TGATGTTAAGATGGTAGCAG+CGG | - | Chr8:79743769-79743788 | MsG0880046906.01.T01:CDS | 40.0% | |
| TGTGAATATGCTTACTCGTG+TGG | - | Chr8:79744880-79744899 | MsG0880046906.01.T01:CDS | 40.0% | |
| TGTTATCTCTTGATGTAGCC+TGG | - | Chr8:79745031-79745050 | MsG0880046906.01.T01:CDS | 40.0% | |
| TTATATTTCGCTGAGGGTTC+CGG | - | Chr8:79744540-79744559 | MsG0880046906.01.T01:CDS | 40.0% | |
| ! | ACAACACGTGCGATATTTTC+CGG | + | Chr8:79743710-79743729 | None:intergenic | 40.0% |
| ! | ACCTGGGATTTGAGATCTAT+TGG | - | Chr8:79744701-79744720 | MsG0880046906.01.T01:CDS | 40.0% |
| ! | ATACAGTGGAGTTAACTTGG+AGG | - | Chr8:79745070-79745089 | MsG0880046906.01.T01:CDS | 40.0% |
| ! | CCTGGGATTTGAGATCTATT+GGG | - | Chr8:79744702-79744721 | MsG0880046906.01.T01:CDS | 40.0% |
| ! | CTGGGATTTGAGATCTATTG+GGG | - | Chr8:79744703-79744722 | MsG0880046906.01.T01:CDS | 40.0% |
| ! | GAAGATGGATTTCGACTTTC+AGG | - | Chr8:79745126-79745145 | MsG0880046906.01.T01:five_prime_UTR | 40.0% |
| ! | GTAAGGGTATGTTTGGATGA+AGG | + | Chr8:79744148-79744167 | None:intergenic | 40.0% |
| ! | TCTGTTTGGGATAACAGGAT+AGG | - | Chr8:79744569-79744588 | MsG0880046906.01.T01:CDS | 40.0% |
| ! | TGGGATTTGAGATCTATTGG+GGG | - | Chr8:79744704-79744723 | MsG0880046906.01.T01:CDS | 40.0% |
| ! | TTTGGTGTGAACTTTGAGAG+CGG | + | Chr8:79743232-79743251 | None:intergenic | 40.0% |
| !! | AGGAAAGTGTTCATCCCAAT+GGG | - | Chr8:79744589-79744608 | MsG0880046906.01.T01:CDS | 40.0% |
| !! | GATATTGGGTTCTGGAATGT+TGG | - | Chr8:79743806-79743825 | MsG0880046906.01.T01:CDS | 40.0% |
| !! | TAGGAAAGTGTTCATCCCAA+TGG | - | Chr8:79744588-79744607 | MsG0880046906.01.T01:CDS | 40.0% |
| !! | TCAGCCTATTTTTCTCCTTC+TGG | - | Chr8:79744775-79744794 | MsG0880046906.01.T01:CDS | 40.0% |
| AAAGGCCTCATACCTTGTAG+TGG | + | Chr8:79744812-79744831 | None:intergenic | 45.0% | |
| AATTCGGGGATATTGGGTTC+TGG | - | Chr8:79743798-79743817 | MsG0880046906.01.T01:CDS | 45.0% | |
| ACTCGTTGGTATGTCCAACA+AGG | - | Chr8:79743604-79743623 | MsG0880046906.01.T01:intron | 45.0% | |
| ATGACAATCAGACCGGAAGA+TGG | - | Chr8:79745111-79745130 | MsG0880046906.01.T01:five_prime_UTR | 45.0% | |
| ATGTTAAGATGGTAGCAGCG+GGG | - | Chr8:79743771-79743790 | MsG0880046906.01.T01:CDS | 45.0% | |
| CCCAATAGATCTCAAATCCC+AGG | + | Chr8:79744705-79744724 | None:intergenic | 45.0% | |
| CGGCCATCATTTCATTGTTG+CGG | + | Chr8:79743212-79743231 | None:intergenic | 45.0% | |
| CTACAATATGAGGGCTTTGC+GGG | + | Chr8:79744652-79744671 | None:intergenic | 45.0% | |
| CTGGAAGGATAACCCAAATG+CGG | - | Chr8:79743732-79743751 | MsG0880046906.01.T01:CDS | 45.0% | |
| GATGTTAAGATGGTAGCAGC+GGG | - | Chr8:79743770-79743789 | MsG0880046906.01.T01:CDS | 45.0% | |
| GCTACAATATGAGGGCTTTG+CGG | + | Chr8:79744653-79744672 | None:intergenic | 45.0% | |
| GGGAACAAATTCGGGGATAT+TGG | - | Chr8:79743791-79743810 | MsG0880046906.01.T01:CDS | 45.0% | |
| GGTATTCCACCAGATTCCAA+AGG | - | Chr8:79743452-79743471 | MsG0880046906.01.T01:intron | 45.0% | |
| TATATTTCGCTGAGGGTTCC+GGG | - | Chr8:79744541-79744560 | MsG0880046906.01.T01:CDS | 45.0% | |
| TCGCCGCAACAATGAAATGA+TGG | - | Chr8:79743206-79743225 | MsG0880046906.01.T01:intron | 45.0% | |
| TCGTACTCAGTGAGTTTCTG+AGG | + | Chr8:79743165-79743184 | None:intergenic | 45.0% | |
| TGATGGAACTGCATGTACCT+GGG | - | Chr8:79744685-79744704 | MsG0880046906.01.T01:CDS | 45.0% | |
| TGTAGCCTGGACAACACTAT+TGG | - | Chr8:79745044-79745063 | MsG0880046906.01.T01:CDS | 45.0% | |
| ! | AATATCGCACGTGTTGTTCC+TGG | - | Chr8:79743713-79743732 | MsG0880046906.01.T01:CDS | 45.0% |
| ! | CACATCAGGCTCCTATTTCT+GGG | - | Chr8:79743855-79743874 | MsG0880046906.01.T01:intron | 45.0% |
| ! | GGGATTTGAGATCTATTGGG+GGG | - | Chr8:79744705-79744724 | MsG0880046906.01.T01:CDS | 45.0% |
| ! | GTAAGGGTGTGTTTGGATGA+AGG | + | Chr8:79744339-79744358 | None:intergenic | 45.0% |
| ! | GTCTCTCTGTTTGGGATAAC+AGG | - | Chr8:79744564-79744583 | MsG0880046906.01.T01:CDS | 45.0% |
| ! | TCGATTGATGGATGCTGAGA+AGG | - | Chr8:79744443-79744462 | MsG0880046906.01.T01:CDS | 45.0% |
| ! | TGGATTTCGACTTTCAGGTG+CGG | - | Chr8:79745131-79745150 | MsG0880046906.01.T01:five_prime_UTR | 45.0% |
| !! | GAATCAGAGCCTTTGGAATC+TGG | + | Chr8:79743464-79743483 | None:intergenic | 45.0% |
| !! | TTTCTATAATTAATTTAAAA+AGG | - | Chr8:79744295-79744314 | MsG0880046906.01.T01:intron | 5.0% |
| ATATGCTTACTCGTGTGGCC+TGG | - | Chr8:79744885-79744904 | MsG0880046906.01.T01:intron | 50.0% | |
| ATATTTCGCTGAGGGTTCCG+GGG | - | Chr8:79744542-79744561 | MsG0880046906.01.T01:CDS | 50.0% | |
| CCACATCAGGCTCCTATTTC+TGG | - | Chr8:79743854-79743873 | MsG0880046906.01.T01:intron | 50.0% | |
| CCAGAAATAGGAGCCTGATG+TGG | + | Chr8:79743857-79743876 | None:intergenic | 50.0% | |
| CCTCATACCTTGTAGTGGCA+AGG | + | Chr8:79744807-79744826 | None:intergenic | 50.0% | |
| CCTTGCCACTACAAGGTATG+AGG | - | Chr8:79744804-79744823 | MsG0880046906.01.T01:CDS | 50.0% | |
| CTGATGGAACTGCATGTACC+TGG | - | Chr8:79744684-79744703 | MsG0880046906.01.T01:CDS | 50.0% | |
| CTTGGGACGAATGGAGAGTT+CGG | + | Chr8:79743259-79743278 | None:intergenic | 50.0% | |
| GGAAGGGCAAAACCGCATTT+GGG | + | Chr8:79743747-79743766 | None:intergenic | 50.0% | |
| GGAATCTGGTGGAATACCTC+TGG | + | Chr8:79743450-79743469 | None:intergenic | 50.0% | |
| GGTACATGCAGTTCCATCAG+AGG | + | Chr8:79744684-79744703 | None:intergenic | 50.0% | |
| GTAGCAGCGGGGAACAAATT+CGG | - | Chr8:79743782-79743801 | MsG0880046906.01.T01:CDS | 50.0% | |
| GTAGCTACCAGTTCCTCTGA+TGG | - | Chr8:79744668-79744687 | MsG0880046906.01.T01:CDS | 50.0% | |
| TAGCAGCGGGGAACAAATTC+GGG | - | Chr8:79743783-79743802 | MsG0880046906.01.T01:CDS | 50.0% | |
| TATCCCAAACAGAGAGACCC+CGG | + | Chr8:79744562-79744581 | None:intergenic | 50.0% | |
| TGCAGTTCCATCAGAGGAAC+TGG | + | Chr8:79744678-79744697 | None:intergenic | 50.0% | |
| TGGAAGGGCAAAACCGCATT+TGG | + | Chr8:79743748-79743767 | None:intergenic | 50.0% | |
| ! | AATGGAGAGTTCGGTGGCTT+TGG | + | Chr8:79743250-79743269 | None:intergenic | 50.0% |
| ! | ACTTTCAGGTGCGGTTTCTG+GGG | - | Chr8:79745140-79745159 | MsG0880046906.01.T01:five_prime_UTR | 50.0% |
| ! | CGCATTTGGGTTATCCTTCC+AGG | + | Chr8:79743734-79743753 | None:intergenic | 50.0% |
| ! | GACTTTCAGGTGCGGTTTCT+GGG | - | Chr8:79745139-79745158 | MsG0880046906.01.T01:five_prime_UTR | 50.0% |
| !! | TCAGAGCCTTTGGAATCTGG+TGG | + | Chr8:79743461-79743480 | None:intergenic | 50.0% |
| AGACGCTCACTTCGAACCAG+AGG | - | Chr8:79743431-79743450 | MsG0880046906.01.T01:intron | 55.0% | |
| AGCAGCGGGGAACAAATTCG+GGG | - | Chr8:79743784-79743803 | MsG0880046906.01.T01:CDS | 55.0% | |
| GATGCAGCCTTGCCACTACA+AGG | - | Chr8:79744797-79744816 | MsG0880046906.01.T01:CDS | 55.0% | |
| GTCCTCAAGGCTGTGTGCTT+AGG | + | Chr8:79744731-79744750 | None:intergenic | 55.0% | |
| GTTCCGGGGTCTCTCTGTTT+GGG | - | Chr8:79744556-79744575 | MsG0880046906.01.T01:CDS | 55.0% | |
| ! | CGACTTTCAGGTGCGGTTTC+TGG | - | Chr8:79745138-79745157 | MsG0880046906.01.T01:five_prime_UTR | 55.0% |
| ! | TCGCACGTGTTGTTCCTGGA+AGG | - | Chr8:79743717-79743736 | MsG0880046906.01.T01:CDS | 55.0% |
| GGCCTAAGCACACAGCCTTG+AGG | - | Chr8:79744726-79744745 | MsG0880046906.01.T01:CDS | 60.0% | |
| GGGACGAATGGAGAGTTCGG+TGG | + | Chr8:79743256-79743275 | None:intergenic | 60.0% | |
| GGTTCCGGGGTCTCTCTGTT+TGG | - | Chr8:79744555-79744574 | MsG0880046906.01.T01:CDS | 60.0% | |
| GTGGCAAGGCTGCATCCAGA+AGG | + | Chr8:79744793-79744812 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 79743087 | 79745179 | 79743087 | ID=MsG0880046906.01;Name=MsG0880046906.01 |
| Chr8 | mRNA | 79743087 | 79745179 | 79743087 | ID=MsG0880046906.01.T01;Parent=MsG0880046906.01;Name=MsG0880046906.01.T01;_AED=0.46;_eAED=0.47;_QI=69|0.66|0.5|1|0.66|0.75|4|0|312 |
| Chr8 | exon | 79743087 | 79743217 | 79743087 | ID=MsG0880046906.01.T01:exon:10105;Parent=MsG0880046906.01.T01 |
| Chr8 | exon | 79743711 | 79743852 | 79743711 | ID=MsG0880046906.01.T01:exon:10104;Parent=MsG0880046906.01.T01 |
| Chr8 | exon | 79744359 | 79744902 | 79744359 | ID=MsG0880046906.01.T01:exon:10103;Parent=MsG0880046906.01.T01 |
| Chr8 | exon | 79744989 | 79745179 | 79744989 | ID=MsG0880046906.01.T01:exon:10102;Parent=MsG0880046906.01.T01 |
| Chr8 | five_prime_UTR | 79745111 | 79745179 | 79745111 | ID=MsG0880046906.01.T01:five_prime_utr;Parent=MsG0880046906.01.T01 |
| Chr8 | CDS | 79744989 | 79745110 | 79744989 | ID=MsG0880046906.01.T01:cds;Parent=MsG0880046906.01.T01 |
| Chr8 | CDS | 79744359 | 79744902 | 79744359 | ID=MsG0880046906.01.T01:cds;Parent=MsG0880046906.01.T01 |
| Chr8 | CDS | 79743711 | 79743852 | 79743711 | ID=MsG0880046906.01.T01:cds;Parent=MsG0880046906.01.T01 |
| Chr8 | CDS | 79743087 | 79743217 | 79743087 | ID=MsG0880046906.01.T01:cds;Parent=MsG0880046906.01.T01 |
| Gene Sequence |
| Protein sequence |
