AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046904.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046904.01.T01 MTR_4g116870 96.538 260 9 0 202 461 281 540 2.12e-175 516
MsG0880046904.01.T01 MTR_4g116870 99.471 189 1 0 1 189 1 189 4.73e-130 399
MsG0880046904.01.T01 MTR_4g116870 99.000 100 0 1 526 625 531 629 3.86e-56 202
MsG0880046904.01.T01 MTR_4g122270 59.716 211 85 0 233 443 480 690 2.75e-73 253
MsG0880046904.01.T01 MTR_7g109480 55.556 207 92 0 236 442 314 520 8.59e-71 243
MsG0880046904.01.T01 MTR_8g090000 55.238 210 94 0 233 442 326 535 1.73e-69 241
MsG0880046904.01.T01 MTR_2g437540 50.877 228 112 0 215 442 310 537 3.29e-69 240
MsG0880046904.01.T01 MTR_4g071090 35.680 412 178 6 219 625 394 723 3.28e-68 238
MsG0880046904.01.T01 MTR_4g096700 45.614 285 150 2 184 466 224 505 3.88e-67 234
MsG0880046904.01.T01 MTR_7g100680 48.372 215 106 3 232 442 329 542 1.43e-56 205
MsG0880046904.01.T01 MTR_2g009190 45.000 240 116 6 223 454 277 508 1.68e-50 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046904.01.T01 AT2G07690 91.165 249 22 0 202 450 277 525 2.23e-156 467
MsG0880046904.01.T01 AT2G07690 67.725 189 57 1 1 189 1 185 2.33e-76 258
MsG0880046904.01.T01 AT2G07690 63.025 119 37 4 510 625 509 623 4.10e-35 142
MsG0880046904.01.T01 AT2G07690 91.165 249 22 0 202 450 275 523 2.90e-156 467
MsG0880046904.01.T01 AT2G07690 66.667 189 57 2 1 189 1 183 4.70e-73 249
MsG0880046904.01.T01 AT2G07690 63.025 119 37 4 510 625 507 621 4.50e-35 141
MsG0880046904.01.T01 AT1G44900 58.768 211 87 0 233 443 480 690 4.74e-73 253
MsG0880046904.01.T01 AT1G44900 58.768 211 87 0 233 443 482 692 5.05e-73 253
MsG0880046904.01.T01 AT4G02060 55.238 210 94 0 233 442 309 518 1.42e-72 248
MsG0880046904.01.T01 AT4G02060 55.238 210 94 0 233 442 309 518 1.42e-72 248
MsG0880046904.01.T01 AT5G44635 46.538 260 125 1 223 468 318 577 5.63e-71 245
MsG0880046904.01.T01 AT5G44635 46.538 260 125 1 223 468 318 577 1.21e-70 245
MsG0880046904.01.T01 AT5G46280 47.510 261 132 2 184 442 220 477 2.83e-69 235
MsG0880046904.01.T01 AT5G46280 47.510 261 132 2 184 442 220 477 4.00e-69 236
MsG0880046904.01.T01 AT5G46280 47.510 261 132 2 184 442 220 477 1.97e-68 236
MsG0880046904.01.T01 AT5G46280 47.510 261 132 2 184 442 220 477 8.03e-68 236
MsG0880046904.01.T01 AT2G16440 52.174 207 99 0 236 442 421 627 2.22e-64 228
MsG0880046904.01.T01 AT3G09660 34.101 434 221 11 206 625 299 681 1.19e-62 221
MsG0880046904.01.T01 AT3G09660 33.641 434 223 10 206 625 299 681 2.55e-62 221
MsG0880046904.01.T01 AT3G09660 43.548 248 127 5 206 442 299 544 6.70e-55 200
MsG0880046904.01.T01 AT2G14050 42.292 253 128 5 211 454 266 509 1.98e-51 188
MsG0880046904.01.T01 AT2G14050 42.292 253 128 5 211 454 266 509 2.46e-51 188

Find 145 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATCAACGAGAAGATATT+TGG 0.123004 8:-79722105 None:intergenic
CCTATTGCTGTTTATACTTC+TGG 0.178036 8:+79724728 MsG0880046904.01.T01:CDS
AAGATTGCTCCGTCTATATT+TGG 0.214278 8:+79724124 MsG0880046904.01.T01:CDS
TCCAGCTGCCTTACAGTAAT+TGG 0.220836 8:-79726256 None:intergenic
TAGATCTCTGATTTGGGGTT+AGG 0.231546 8:-79721889 None:intergenic
TACAGACAACTATTCTTTCT+AGG 0.235658 8:+79725319 MsG0880046904.01.T01:CDS
TCAGATTCTTCTTACTTCTA+AGG 0.251667 8:+79722379 MsG0880046904.01.T01:CDS
AGTCAGTGGTTGACGTATTT+TGG 0.253987 8:+79725687 MsG0880046904.01.T01:CDS
AACTGCGGCGGCGCAGGTTT+TGG 0.265279 8:+79722292 MsG0880046904.01.T01:CDS
CAGTTAGACAGCCTTATATC+AGG 0.298824 8:+79723648 MsG0880046904.01.T01:CDS
TCGAAGCTTGTTAAAATTGC+TGG 0.301023 8:+79722916 MsG0880046904.01.T01:CDS
CAAATATCTTCTCGTTGATA+TGG 0.306777 8:+79722106 MsG0880046904.01.T01:CDS
GACTTACAGTGCTGCTATCT+TGG 0.313274 8:-79724790 None:intergenic
ACCTGTGACTTTGCAGTAGA+TGG 0.318792 8:-79724354 None:intergenic
GTTCCGTGTCGGCCAGGACT+TGG 0.330436 8:+79723021 MsG0880046904.01.T01:CDS
CCGTTTCCAAGGAAGAAAAT+TGG 0.334699 8:+79725786 MsG0880046904.01.T01:CDS
TTCCGTGTCGGCCAGGACTT+GGG 0.342804 8:+79723022 MsG0880046904.01.T01:CDS
ATTCCTACAACCCTGATATA+AGG 0.342845 8:-79723659 None:intergenic
CCAGAAGTATAAACAGCAAT+AGG 0.346443 8:-79724728 None:intergenic
AACGGTTGTTATTCCTGCTT+TGG 0.353473 8:-79725106 None:intergenic
ACGAAGGTTGCTGGAGATAC+TGG 0.362908 8:+79722326 MsG0880046904.01.T01:CDS
TGGCCATGATGATGTCAAAA+AGG 0.370780 8:+79724144 MsG0880046904.01.T01:CDS
CTGTTTCGATGAGATCGCTT+GGG 0.370900 8:+79722408 MsG0880046904.01.T01:CDS
AGATCTCTGATTTGGGGTTA+GGG 0.372955 8:-79721888 None:intergenic
AAATATAGACGGAGCAATCT+TGG 0.375907 8:-79724122 None:intergenic
GATATTTGGGATTGTGAAGA+AGG 0.376760 8:-79722091 None:intergenic
CGGAGTTTAGAAGGAAGATC+AGG 0.377014 8:-79722149 None:intergenic
GAGGATGGTGTGGTTGGAGA+TGG 0.382041 8:-79722003 None:intergenic
GCTGTTTATACTTCTGGAAA+AGG 0.386854 8:+79724734 MsG0880046904.01.T01:CDS
CTTACAATTCTTACATATCA+AGG 0.387938 8:-79722986 None:intergenic
GTAAGGGAAGACATTGTTAC+CGG 0.388939 8:-79722060 None:intergenic
AGTTTGAAGACGAAGGTTGC+TGG 0.391003 8:+79722317 MsG0880046904.01.T01:CDS
TCTGATTTGGGGTTAGGGTT+CGG 0.394369 8:-79721883 None:intergenic
CTGTTCCATGGCTTCATGAA+TGG 0.399516 8:-79725067 None:intergenic
GGAGCAGATCGGAGTTTAGA+AGG 0.399895 8:-79722158 None:intergenic
CCAGATGGGGTGAGATTAAG+AGG 0.400870 8:+79724303 MsG0880046904.01.T01:CDS
TGAAAACTATCGAAAACAAT+TGG 0.401608 8:-79725664 None:intergenic
CCTCTTAATCTCACCCCATC+TGG 0.406630 8:-79724303 None:intergenic
TGCTGGAGATACTGGTGATA+TGG 0.408690 8:+79722334 MsG0880046904.01.T01:CDS
TGAAGAAGGCTTTCTCTGTA+AGG 0.411268 8:-79722077 None:intergenic
CAGCCTTATATCAGGGTTGT+AGG 0.413282 8:+79723656 MsG0880046904.01.T01:CDS
TGTTATTCCTGCTTTGGCTA+TGG 0.413969 8:-79725100 None:intergenic
GATATCAATGTGTTACTTCT+CGG 0.414213 8:+79724327 MsG0880046904.01.T01:CDS
GATGGTGTGGTTGGAGATGG+TGG 0.418214 8:-79722000 None:intergenic
AGGCGGCAAGCAAATGAAAC+TGG 0.418931 8:+79726217 MsG0880046904.01.T01:CDS
ATATCAATGTGTTACTTCTC+GGG 0.421636 8:+79724328 MsG0880046904.01.T01:CDS
TTCATCCGTAACTTTGAAAC+CGG 0.423579 8:+79722041 MsG0880046904.01.T01:CDS
TAACAACCGTTCTTAATTCA+AGG 0.424580 8:+79725118 MsG0880046904.01.T01:CDS
ATATCAACGAGAAGATATTT+GGG 0.427630 8:-79722104 None:intergenic
TGGTTTACACACCTATCTTC+TGG 0.427654 8:-79724972 None:intergenic
AGCTAGTCATATCATCATAA+AGG 0.439189 8:+79725721 MsG0880046904.01.T01:CDS
GTGCAACGAGGGGCGAGAAC+AGG 0.440941 8:+79725759 MsG0880046904.01.T01:CDS
TGTTACCGGTTTCAAAGTTA+CGG 0.442414 8:-79722046 None:intergenic
GGATATAGTTTGCTGTTCCA+TGG 0.450556 8:-79725079 None:intergenic
CGAAGCTTGTTAAAATTGCT+GGG 0.450647 8:+79722917 MsG0880046904.01.T01:CDS
GTTTGAAACTGCGGCGGCGC+AGG 0.452541 8:+79722286 MsG0880046904.01.T01:intron
ACCAATTACTGTAAGGCAGC+TGG 0.457399 8:+79726255 MsG0880046904.01.T01:CDS
AACAACTGCTCCCCAAGTCC+TGG 0.461510 8:-79723033 None:intergenic
TCTGTTTCGATGAGATCGCT+TGG 0.471927 8:+79722407 MsG0880046904.01.T01:CDS
TCCTGCCGATATTCTTCCTC+TGG 0.474302 8:+79722178 MsG0880046904.01.T01:CDS
TGAAGGAGGAGCCATGGTCT+TGG 0.475981 8:+79724905 MsG0880046904.01.T01:CDS
CGCAGTGGGACCTCGAGACT+TGG 0.476032 8:-79723699 None:intergenic
GCAAGCAGCATTTGCCAGAT+GGG 0.480137 8:+79724289 MsG0880046904.01.T01:intron
ATAAGATGAGACCAGAAGAT+AGG 0.481347 8:+79724961 MsG0880046904.01.T01:CDS
AAGCAAGTTCCGTGTCGGCC+AGG 0.487155 8:+79723015 MsG0880046904.01.T01:CDS
CAGAATGTACGAACAAGATA+AGG 0.491874 8:+79725371 MsG0880046904.01.T01:CDS
CGTCGTCCCATGAGTGTGCT+TGG 0.492954 8:-79721956 None:intergenic
AATTACCAGAGGAAGAATAT+CGG 0.493469 8:-79722183 None:intergenic
TTCATGTGATCATGTTCCTC+AGG 0.495887 8:+79723061 MsG0880046904.01.T01:CDS
AGGGCGTTATGATGACCTTA+AGG 0.497343 8:+79725173 MsG0880046904.01.T01:CDS
TGCAAGCAGCATTTGCCAGA+TGG 0.508045 8:+79724288 MsG0880046904.01.T01:intron
GATATGTAAGAATTGTAAGA+AGG 0.509211 8:+79722990 MsG0880046904.01.T01:CDS
TGCCTCTTGATTTGTGTGTG+TGG 0.509928 8:+79725593 MsG0880046904.01.T01:CDS
TCCGTGTCGGCCAGGACTTG+GGG 0.510786 8:+79723023 MsG0880046904.01.T01:CDS
ATATGTAAGAATTGTAAGAA+GGG 0.510915 8:+79722991 MsG0880046904.01.T01:CDS
TCCATCTACTGCAAAGTCAC+AGG 0.516239 8:+79724353 MsG0880046904.01.T01:CDS
CACTCATGGGACGACGGCCG+TGG 0.521865 8:+79721963 MsG0880046904.01.T01:CDS
TCCAAATAAAAGACAGGCCA+TGG 0.522121 8:-79724167 None:intergenic
GTGGTTGGAGATGGTGGCAT+CGG 0.523372 8:-79721994 None:intergenic
CTGCAATACCAATTACTGTA+AGG 0.524353 8:+79726248 MsG0880046904.01.T01:CDS
TTTATTTGGAGGGTCGAGAA+AGG 0.525220 8:+79724180 MsG0880046904.01.T01:CDS
GGAAAAGGATCATCAGCTGC+TGG 0.525321 8:+79724749 MsG0880046904.01.T01:CDS
AATTGCTGCATCGAGGACTA+AGG 0.527556 8:+79722945 MsG0880046904.01.T01:CDS
ACAGCGACCAAGCACACTCA+TGG 0.529247 8:+79721949 MsG0880046904.01.T01:CDS
AGGAAGAAAATTGGCTGAAG+AGG 0.535236 8:+79725795 MsG0880046904.01.T01:CDS
GGTCATCATAACGCCCTGAT+GGG 0.536805 8:-79725167 None:intergenic
AGGTCATCATAACGCCCTGA+TGG 0.538183 8:-79725168 None:intergenic
GGCAGCTGGAAGCTATTGTA+AGG 0.539565 8:+79726269 MsG0880046904.01.T01:CDS
GGAGCCATGGTCTTGGCAGA+TGG 0.545202 8:+79724912 MsG0880046904.01.T01:CDS
ACTATATCCATAGCCAAAGC+AGG 0.554265 8:+79725093 MsG0880046904.01.T01:CDS
GATATGGAAGATGCTGCTCC+TGG 0.556873 8:+79722350 MsG0880046904.01.T01:CDS
TCTTCATTTGTAAACGCAGT+GGG 0.560112 8:-79723713 None:intergenic
AGTTAGACAGCCTTATATCA+GGG 0.561967 8:+79723649 MsG0880046904.01.T01:CDS
CGACCCTCCAAATAAAAGAC+AGG 0.564378 8:-79724173 None:intergenic
TGAATGCCACCCTCGTCTAT+CGG 0.564691 8:+79725922 MsG0880046904.01.T01:CDS
TCCCCAAGTCCTGGCCGACA+CGG 0.565031 8:-79723024 None:intergenic
ACCAGAGGAAGAATATCGGC+AGG 0.566555 8:-79722179 None:intergenic
TTATCTTGAAGGAGGAGCCA+TGG 0.566964 8:+79724899 MsG0880046904.01.T01:CDS
TTTGGTGAGTTTGAAGACGA+AGG 0.568540 8:+79722310 MsG0880046904.01.T01:CDS
ACAGGACAAGCTGCATTCAA+AGG 0.568869 8:-79725456 None:intergenic
GAACAGGACTCCCGTTTCCA+AGG 0.569413 8:+79725775 MsG0880046904.01.T01:CDS
AGGGTTGTAGGAATAGAAGA+TGG 0.573206 8:+79723668 MsG0880046904.01.T01:CDS
TTCATCAGCTAGTGCAACGA+GGG 0.574875 8:+79725748 MsG0880046904.01.T01:CDS
TGGCATCGGTTTCGCCGCCA+CGG 0.575788 8:-79721980 None:intergenic
TGTTTCGATGAGATCGCTTG+GGG 0.579790 8:+79722409 MsG0880046904.01.T01:CDS
GATTCTTCTTACTTCTAAGG+AGG 0.580034 8:+79722382 MsG0880046904.01.T01:CDS
GAAGAAGGCTTTCTCTGTAA+GGG 0.582506 8:-79722076 None:intergenic
TCATGGGACGACGGCCGTGG+CGG 0.583602 8:+79721966 MsG0880046904.01.T01:CDS
AGAAGAATCTGAACATCACC+AGG 0.592820 8:-79722368 None:intergenic
TAATTATGTGAATATCAGAC+AGG 0.597312 8:+79725970 MsG0880046904.01.T01:CDS
TGCCACACACACAAATCAAG+AGG 0.597667 8:-79725595 None:intergenic
ATGTAAAATATATTTATGCA+TGG 0.599614 8:-79725639 None:intergenic
AGCAAATGAAACTGGAGAAG+CGG 0.600677 8:+79726225 MsG0880046904.01.T01:CDS
CAAGCAGCATTTGCCAGATG+GGG 0.602806 8:+79724290 MsG0880046904.01.T01:intron
CAGCGACCAAGCACACTCAT+GGG 0.605684 8:+79721950 MsG0880046904.01.T01:CDS
AGAAGTCCTTGAATTAAGAA+CGG 0.607422 8:-79725124 None:intergenic
GGTTGCCATTCATGAAGCCA+TGG 0.607570 8:+79725062 MsG0880046904.01.T01:CDS
TTCTTCATTTGTAAACGCAG+TGG 0.608401 8:-79723714 None:intergenic
GTCATCATAACGCCCTGATG+GGG 0.610509 8:-79725166 None:intergenic
AAAATGTCAGGTTGGGACGA+AGG 0.611384 8:+79721915 MsG0880046904.01.T01:exon
TATGTAAGAATTGTAAGAAG+GGG 0.613683 8:+79722992 MsG0880046904.01.T01:CDS
GCCATGGTCTTGGCAGATGG+AGG 0.614872 8:+79724915 MsG0880046904.01.T01:CDS
ACCTCCATCTGCCAAGACCA+TGG 0.616041 8:-79724916 None:intergenic
GAATATCGGCAGGAGCAGAT+CGG 0.620076 8:-79722169 None:intergenic
AATGTTTCTCCAGACTGCAC+AGG 0.622699 8:+79725284 MsG0880046904.01.T01:intron
CACATGCTGAAAGCTGAGAA+CGG 0.632793 8:-79725415 None:intergenic
TCATCATGGCCAAATATAGA+CGG 0.635047 8:-79724133 None:intergenic
CAAGCACACTCATGGGACGA+CGG 0.635542 8:+79721957 MsG0880046904.01.T01:CDS
TCATCATAACGCCCTGATGG+GGG 0.637899 8:-79725165 None:intergenic
TATCGGAAGCTGCAGCAACA+AGG 0.639095 8:+79725939 MsG0880046904.01.T01:CDS
AGGGGAAGCAAGTTCCGTGT+CGG 0.645373 8:+79723010 MsG0880046904.01.T01:CDS
TTTGTAGTTTGAAACTGCGG+CGG 0.651828 8:+79722280 MsG0880046904.01.T01:intron
TATCAATGTGTTACTTCTCG+GGG 0.652386 8:+79724329 MsG0880046904.01.T01:CDS
GGAAATGAAGCCAAGTCTCG+AGG 0.655979 8:+79723689 MsG0880046904.01.T01:CDS
GCTGCAGCTTCCGATAGACG+AGG 0.659463 8:-79725932 None:intergenic
GGAGTTTAGAAGGAAGATCA+GGG 0.662361 8:-79722148 None:intergenic
ATGTCAGGTTGGGACGAAGG+AGG 0.674877 8:+79721918 MsG0880046904.01.T01:CDS
CTGCAGCTTCCGATAGACGA+GGG 0.675030 8:-79725931 None:intergenic
CTTGGATTACAGAGGCTGTG+AGG 0.684123 8:-79724772 None:intergenic
ATTCATCAGCTAGTGCAACG+AGG 0.690555 8:+79725747 MsG0880046904.01.T01:CDS
GCTGCTATCTTGGATTACAG+AGG 0.692274 8:-79724780 None:intergenic
GGATAACAATTGCTGCATCG+AGG 0.699806 8:+79722938 MsG0880046904.01.T01:CDS
TCATCAGCTAGTGCAACGAG+GGG 0.709012 8:+79725749 MsG0880046904.01.T01:CDS
CAGCTTCCGATAGACGAGGG+TGG 0.710744 8:-79725928 None:intergenic
GGAACATGATCACATGAACG+TGG 0.719167 8:-79723056 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAATTATTTTTAAACCT+AGG + Chr8:79723969-79723988 MsG0880046904.01.T01:intron 10.0%
!!! TGAAAAAATAATTACATTTT+TGG - Chr8:79724525-79724544 None:intergenic 10.0%
!! ATGTAAAATATATTTATGCA+TGG - Chr8:79725642-79725661 None:intergenic 15.0%
!!! ATTTTTAAACCAACTTTATT+AGG + Chr8:79723855-79723874 MsG0880046904.01.T01:intron 15.0%
!!! GTTATTTTCACAAATATTAT+TGG + Chr8:79722575-79722594 MsG0880046904.01.T01:intron 15.0%
!!! TAAAATTTTTTCACAAGAAA+AGG - Chr8:79726190-79726209 None:intergenic 15.0%
!!! TTTTCTTGTGAAAAAATTTT+AGG + Chr8:79726189-79726208 MsG0880046904.01.T01:intron 15.0%
!! AATCTAAGCATTATTATATG+TGG - Chr8:79724548-79724567 None:intergenic 20.0%
!! ATATGTAAGAATTGTAAGAA+GGG + Chr8:79722991-79723010 MsG0880046904.01.T01:CDS 20.0%
!! GAAAAAAAAAAAAAAGAGGA+GGG - Chr8:79725214-79725233 None:intergenic 20.0%
!! TATACATTTGATATGACAAA+AGG + Chr8:79723300-79723319 MsG0880046904.01.T01:intron 20.0%
!! TCATAAAAAAAACTGTAGAT+TGG - Chr8:79723560-79723579 None:intergenic 20.0%
!!! ATTTTTACAATTTAGCTTAG+CGG + Chr8:79724601-79724620 MsG0880046904.01.T01:intron 20.0%
!!! CTTATTTAATTTTGAGCATT+TGG + Chr8:79722797-79722816 MsG0880046904.01.T01:intron 20.0%
!!! GGTTTAAAAATTTAGTTTCA+CGG - Chr8:79723846-79723865 None:intergenic 20.0%
!!! GTTTAAAAATTTAGTTTCAC+GGG - Chr8:79723845-79723864 None:intergenic 20.0%
!!! TATCTTTTTATCATTTTCGT+AGG + Chr8:79722882-79722901 MsG0880046904.01.T01:intron 20.0%
!!! TGAAAAAATTTTAGGATATG+AGG + Chr8:79726197-79726216 MsG0880046904.01.T01:intron 20.0%
!!! TTTTTTTAGATCTCTGATTT+GGG - Chr8:79721898-79721917 None:intergenic 20.0%
!!! TTTTTTTTAGATCTCTGATT+TGG - Chr8:79721899-79721918 None:intergenic 20.0%
! AAATATCCAAACTTTCAACA+TGG + Chr8:79724240-79724259 MsG0880046904.01.T01:intron 25.0%
! AAATCAACAAATTCATCAAC+TGG - Chr8:79722230-79722249 None:intergenic 25.0%
! AGAGATCTAAAAAAAATGTC+AGG + Chr8:79721903-79721922 MsG0880046904.01.T01:exon 25.0%
! ATATCAACGAGAAGATATTT+GGG - Chr8:79722107-79722126 None:intergenic 25.0%
! ATCTAAAAAAAATGTCAGGT+TGG + Chr8:79721907-79721926 MsG0880046904.01.T01:exon 25.0%
! ATGACATCCAACAATAAAAA+AGG - Chr8:79726100-79726119 None:intergenic 25.0%
! CAGATATCAAATATCTCAAT+TGG - Chr8:79722489-79722508 None:intergenic 25.0%
! CGAGGAAAAAAAAAAAAAAG+AGG - Chr8:79725218-79725237 None:intergenic 25.0%
! CTTACAATTCTTACATATCA+AGG - Chr8:79722989-79723008 None:intergenic 25.0%
! CTTTGAGCTGTTATATAAAT+AGG + Chr8:79725879-79725898 MsG0880046904.01.T01:intron 25.0%
! GATATGTAAGAATTGTAAGA+AGG + Chr8:79722990-79723009 MsG0880046904.01.T01:CDS 25.0%
! GGAAAAAAAAAAAAAAGAGG+AGG - Chr8:79725215-79725234 None:intergenic 25.0%
! TAACTAAAGAACCATTCTAA+AGG - Chr8:79724457-79724476 None:intergenic 25.0%
! TAATTATGTGAATATCAGAC+AGG + Chr8:79725970-79725989 MsG0880046904.01.T01:CDS 25.0%
! TATGTAAGAATTGTAAGAAG+GGG + Chr8:79722992-79723011 MsG0880046904.01.T01:CDS 25.0%
! TCTAAAAAAAATGTCAGGTT+GGG + Chr8:79721908-79721927 MsG0880046904.01.T01:exon 25.0%
! TGAAAACTATCGAAAACAAT+TGG - Chr8:79725667-79725686 None:intergenic 25.0%
! TGTGTTTATGAAGTTGTTTA+GGG + Chr8:79722453-79722472 MsG0880046904.01.T01:intron 25.0%
! TTGTGTTTATGAAGTTGTTT+AGG + Chr8:79722452-79722471 MsG0880046904.01.T01:intron 25.0%
! TTTATTAGTTCAGCATTCAA+AGG - Chr8:79726139-79726158 None:intergenic 25.0%
! TTTCACTGTATCTTTATGTA+GGG + Chr8:79725041-79725060 MsG0880046904.01.T01:intron 25.0%
!! CTTTGGTAATTTATCATTGT+TGG + Chr8:79725007-79725026 MsG0880046904.01.T01:intron 25.0%
!! GGATGAATTCTTTGAATTTT+TGG - Chr8:79722028-79722047 None:intergenic 25.0%
!! TGAATACTCATGTATTTTGT+TGG + Chr8:79724217-79724236 MsG0880046904.01.T01:intron 25.0%
!! TGGAATCTATAGTATTTTTC+AGG + Chr8:79723470-79723489 MsG0880046904.01.T01:intron 25.0%
!! TTTTCACTGTATCTTTATGT+AGG + Chr8:79725040-79725059 MsG0880046904.01.T01:intron 25.0%
!!! AAAAATTTTAGGATATGAGG+CGG + Chr8:79726200-79726219 MsG0880046904.01.T01:intron 25.0%
!!! GTTTTTGCCTTTTTTATTGT+TGG + Chr8:79726090-79726109 MsG0880046904.01.T01:intron 25.0%
!!! GTTTTTTTTTTTTTGTAGCC+TGG + Chr8:79723177-79723196 MsG0880046904.01.T01:intron 25.0%
!!! TGAATTCTTTGAATTTTTGG+AGG - Chr8:79722025-79722044 None:intergenic 25.0%
!!! TTCTTTATTTTGCGTTTTTG+AGG + Chr8:79723133-79723152 MsG0880046904.01.T01:intron 25.0%
!!! TTTTTTAGATCTCTGATTTG+GGG - Chr8:79721897-79721916 None:intergenic 25.0%
!!! TTTTTTGTAGTTTGAAACTG+CGG + Chr8:79722277-79722296 MsG0880046904.01.T01:intron 25.0%
AACCATTTCTTGTTACTCTT+TGG + Chr8:79724990-79725009 MsG0880046904.01.T01:intron 30.0%
AACTGTAAAATGTAACTGTC+AGG - Chr8:79724683-79724702 None:intergenic 30.0%
AATTACCAGAGGAAGAATAT+CGG - Chr8:79722186-79722205 None:intergenic 30.0%
ACTTAATGCATTGTTTGCAT+TGG + Chr8:79724817-79724836 MsG0880046904.01.T01:intron 30.0%
AGAAGTCCTTGAATTAAGAA+CGG - Chr8:79725127-79725146 None:intergenic 30.0%
AGCTAGTCATATCATCATAA+AGG + Chr8:79725721-79725740 MsG0880046904.01.T01:CDS 30.0%
AGTTTAGAAGAAATTACCAG+AGG - Chr8:79722197-79722216 None:intergenic 30.0%
ATATATAGCAGTTGACCTTA+AGG - Chr8:79725191-79725210 None:intergenic 30.0%
ATTATTGAAACTCAAGTGCT+TGG + Chr8:79722674-79722693 MsG0880046904.01.T01:intron 30.0%
CAAATATCTTCTCGTTGATA+TGG + Chr8:79722106-79722125 MsG0880046904.01.T01:CDS 30.0%
CAAATGTATATTACTACCTC+CGG - Chr8:79723290-79723309 None:intergenic 30.0%
CACTGATAACCTAATAAAGT+TGG - Chr8:79723867-79723886 None:intergenic 30.0%
CAGCTAAAACGTGATATTAA+AGG - Chr8:79723796-79723815 None:intergenic 30.0%
CATATCAACGAGAAGATATT+TGG - Chr8:79722108-79722127 None:intergenic 30.0%
CTAAAACGTGATATTAAAGG+AGG - Chr8:79723793-79723812 None:intergenic 30.0%
GATGTCTCTTACATGATAAA+AGG + Chr8:79723155-79723174 MsG0880046904.01.T01:intron 30.0%
GCAAACAATGCATTAAGTAA+AGG - Chr8:79724815-79724834 None:intergenic 30.0%
TAAAAAAGGCAAAAACCGAT+CGG - Chr8:79726086-79726105 None:intergenic 30.0%
TAACAACCGTTCTTAATTCA+AGG + Chr8:79725118-79725137 MsG0880046904.01.T01:CDS 30.0%
TAACTAAAGAACCAGTCTAA+AGG - Chr8:79724397-79724416 None:intergenic 30.0%
TAATCATGACATCTTTATGC+TGG + Chr8:79723343-79723362 MsG0880046904.01.T01:intron 30.0%
TACAGACAACTATTCTTTCT+AGG + Chr8:79725319-79725338 MsG0880046904.01.T01:CDS 30.0%
TACCAAAGAGTAACAAGAAA+TGG - Chr8:79724995-79725014 None:intergenic 30.0%
TAGAACTGAGAAATCATAGA+CGG - Chr8:79723927-79723946 None:intergenic 30.0%
TATTGACATCAACTGTAGAT+TGG - Chr8:79723585-79723604 None:intergenic 30.0%
TCAAGAGATTGGTATATTTG+AGG + Chr8:79722844-79722863 MsG0880046904.01.T01:intron 30.0%
TCAGATTCTTCTTACTTCTA+AGG + Chr8:79722379-79722398 MsG0880046904.01.T01:CDS 30.0%
TTATTGAAACTCAAGTGCTT+GGG + Chr8:79722675-79722694 MsG0880046904.01.T01:intron 30.0%
TTGTCTTTCTTTCAAGAGAT+TGG + Chr8:79722833-79722852 MsG0880046904.01.T01:intron 30.0%
! AGCATAATCAACTTGTTTCA+TGG - Chr8:79722727-79722746 None:intergenic 30.0%
! CACACTTCAATTAAAAGTGT+CGG - Chr8:79722517-79722536 None:intergenic 30.0%
! TTTGCAATTTTCCTTTAGAC+TGG + Chr8:79724383-79724402 MsG0880046904.01.T01:intron 30.0%
!! ACTTTTAATTGAAGTGTGAC+CGG + Chr8:79722519-79722538 MsG0880046904.01.T01:intron 30.0%
!! ATATCAATGTGTTACTTCTC+GGG + Chr8:79724328-79724347 MsG0880046904.01.T01:CDS 30.0%
!! GATATCAATGTGTTACTTCT+CGG + Chr8:79724327-79724346 MsG0880046904.01.T01:CDS 30.0%
!! TGATATGCTTTTAAGAAACG+AGG - Chr8:79725236-79725255 None:intergenic 30.0%
!! TGTTGCATTTTCCTTTAGAA+TGG + Chr8:79724443-79724462 MsG0880046904.01.T01:intron 30.0%
!! TTAGTAGTTGATGATGATGT+TGG + Chr8:79726057-79726076 MsG0880046904.01.T01:intron 30.0%
!! TTCTTTGAATTTTTGGAGGA+TGG - Chr8:79722021-79722040 None:intergenic 30.0%
AAATATAGACGGAGCAATCT+TGG - Chr8:79724125-79724144 None:intergenic 35.0%
AAGATACCATTATTAGCACC+AGG - Chr8:79724041-79724060 None:intergenic 35.0%
AAGATTGCTCCGTCTATATT+TGG + Chr8:79724124-79724143 MsG0880046904.01.T01:CDS 35.0%
ATAAGATGAGACCAGAAGAT+AGG + Chr8:79724961-79724980 MsG0880046904.01.T01:CDS 35.0%
ATCAACATACTTGCTCTTGT+CGG - Chr8:79723240-79723259 None:intergenic 35.0%
ATTCCTACAACCCTGATATA+AGG - Chr8:79723662-79723681 None:intergenic 35.0%
CAGAATGTACGAACAAGATA+AGG + Chr8:79725371-79725390 MsG0880046904.01.T01:CDS 35.0%
CTAATAACCATATCGAGACT+AGG - Chr8:79726041-79726060 None:intergenic 35.0%
CTACGATGCGAATGAAATAA+TGG - Chr8:79724641-79724660 None:intergenic 35.0%
CTGCAATACCAATTACTGTA+AGG + Chr8:79726248-79726267 MsG0880046904.01.T01:CDS 35.0%
CTTGAAGTTGCAAGAAAATC+CGG + Chr8:79723268-79723287 MsG0880046904.01.T01:intron 35.0%
GATGAGGAATATGTAACAGT+AGG - Chr8:79724008-79724027 None:intergenic 35.0%
GTGAATGTTAACAGTGTTTG+TGG + Chr8:79723817-79723836 MsG0880046904.01.T01:intron 35.0%
TAGGAATGAAAATTCAGCCT+AGG - Chr8:79723989-79724008 None:intergenic 35.0%
TATTGAAACTCAAGTGCTTG+GGG + Chr8:79722676-79722695 MsG0880046904.01.T01:intron 35.0%
TCATCATGGCCAAATATAGA+CGG - Chr8:79724136-79724155 None:intergenic 35.0%
TCTTCATTTGTAAACGCAGT+GGG - Chr8:79723716-79723735 None:intergenic 35.0%
TGCTTTGCTTTATACCTTGT+TGG + Chr8:79723764-79723783 MsG0880046904.01.T01:intron 35.0%
TTCTTCATTTGTAAACGCAG+TGG - Chr8:79723717-79723736 None:intergenic 35.0%
TTGAACAAGATGTCGATCAA+CGG - Chr8:79723418-79723437 None:intergenic 35.0%
! AGACGGTATCTAGTATTGAA+AGG - Chr8:79723910-79723929 None:intergenic 35.0%
! AGTTAGACAGCCTTATATCA+GGG + Chr8:79723649-79723668 MsG0880046904.01.T01:CDS 35.0%
! CAAAGCAGTCAATTGATAGT+TGG - Chr8:79723751-79723770 None:intergenic 35.0%
! CAATTTTCTTCCTTGGAAAC+GGG - Chr8:79725788-79725807 None:intergenic 35.0%
! CCAATTTTCTTCCTTGGAAA+CGG - Chr8:79725789-79725808 None:intergenic 35.0%
! CCAGAAGTATAAACAGCAAT+AGG - Chr8:79724731-79724750 None:intergenic 35.0%
! GATATTTGGGATTGTGAAGA+AGG - Chr8:79722094-79722113 None:intergenic 35.0%
! GATTCTTCTTACTTCTAAGG+AGG + Chr8:79722382-79722401 MsG0880046904.01.T01:CDS 35.0%
! GCTGTTTATACTTCTGGAAA+AGG + Chr8:79724734-79724753 MsG0880046904.01.T01:CDS 35.0%
!! ACATTTTTGGATACCACAAG+TGG - Chr8:79724512-79724531 None:intergenic 35.0%
!! ACTTCAATTAAAAGTGTCGG+TGG - Chr8:79722514-79722533 None:intergenic 35.0%
!! CCTATTGCTGTTTATACTTC+TGG + Chr8:79724728-79724747 MsG0880046904.01.T01:CDS 35.0%
!! CGAAGCTTGTTAAAATTGCT+GGG + Chr8:79722917-79722936 MsG0880046904.01.T01:CDS 35.0%
!! GTGTTTTTATGCAGCAACAA+AGG + Chr8:79723617-79723636 MsG0880046904.01.T01:intron 35.0%
!! TATCAATGTGTTACTTCTCG+GGG + Chr8:79724329-79724348 MsG0880046904.01.T01:CDS 35.0%
!! TCGAAGCTTGTTAAAATTGC+TGG + Chr8:79722916-79722935 MsG0880046904.01.T01:CDS 35.0%
!! TGTTACCGGTTTCAAAGTTA+CGG - Chr8:79722049-79722068 None:intergenic 35.0%
!! TTAAAAACAAGTGCCACTTG+TGG + Chr8:79724496-79724515 MsG0880046904.01.T01:intron 35.0%
!! TTCATCCGTAACTTTGAAAC+CGG + Chr8:79722041-79722060 MsG0880046904.01.T01:CDS 35.0%
!!! ATCTTTATGCTGGCTTTTGA+AGG + Chr8:79723353-79723372 MsG0880046904.01.T01:intron 35.0%
!!! GTCTTTTGCTTATTTTGCAG+TGG + Chr8:79723099-79723118 MsG0880046904.01.T01:intron 35.0%
!!! TTCGATAGTTTTCAAGTCAG+TGG + Chr8:79725673-79725692 MsG0880046904.01.T01:CDS 35.0%
AACAATAAGCCACGGATCAA+TGG - Chr8:79723216-79723235 None:intergenic 40.0%
AACTCACGATGTAGAAGAGT+TGG - Chr8:79723499-79723518 None:intergenic 40.0%
AATACTATGAAGCCCACACA+TGG - Chr8:79722627-79722646 None:intergenic 40.0%
ACAATAAGCCACGGATCAAT+GGG - Chr8:79723215-79723234 None:intergenic 40.0%
ACGATTGTTAATCTTGAGCC+AGG - Chr8:79723450-79723469 None:intergenic 40.0%
ACGGATAGAAGCAAGTTTCT+AGG - Chr8:79723399-79723418 None:intergenic 40.0%
ACTATATCCATAGCCAAAGC+AGG + Chr8:79725093-79725112 MsG0880046904.01.T01:CDS 40.0%
AGAAGAATCTGAACATCACC+AGG - Chr8:79722371-79722390 None:intergenic 40.0%
AGCAAATGAAACTGGAGAAG+CGG + Chr8:79726225-79726244 MsG0880046904.01.T01:CDS 40.0%
AGGAAGAAAATTGGCTGAAG+AGG + Chr8:79725795-79725814 MsG0880046904.01.T01:CDS 40.0%
AGGGTTGTAGGAATAGAAGA+TGG + Chr8:79723668-79723687 MsG0880046904.01.T01:CDS 40.0%
ATGAAGTTGTTTAGGGAGCT+AGG + Chr8:79722460-79722479 MsG0880046904.01.T01:intron 40.0%
ATGTAACTGTCAGGCAATGT+TGG - Chr8:79724674-79724693 None:intergenic 40.0%
ATTCTCAATCAAGATACGCG+AGG - Chr8:79724843-79724862 None:intergenic 40.0%
CCGTTTCCAAGGAAGAAAAT+TGG + Chr8:79725786-79725805 MsG0880046904.01.T01:CDS 40.0%
GAAGAAGGCTTTCTCTGTAA+GGG - Chr8:79722079-79722098 None:intergenic 40.0%
GGAGTTTAGAAGGAAGATCA+GGG - Chr8:79722151-79722170 None:intergenic 40.0%
GGCTCAAGATTAACAATCGT+TGG + Chr8:79723450-79723469 MsG0880046904.01.T01:intron 40.0%
GTAAGGGAAGACATTGTTAC+CGG - Chr8:79722063-79722082 None:intergenic 40.0%
TCAACATACTTGCTCTTGTC+GGG - Chr8:79723239-79723258 None:intergenic 40.0%
TCCAAATAAAAGACAGGCCA+TGG - Chr8:79724170-79724189 None:intergenic 40.0%
TGAAGAAGGCTTTCTCTGTA+AGG - Chr8:79722080-79722099 None:intergenic 40.0%
TGAAGTTGTTTAGGGAGCTA+GGG + Chr8:79722461-79722480 MsG0880046904.01.T01:intron 40.0%
TGGTTTACACACCTATCTTC+TGG - Chr8:79724975-79724994 None:intergenic 40.0%
TGTAACTGTCAGGCAATGTT+GGG - Chr8:79724673-79724692 None:intergenic 40.0%
TGTTATTCCTGCTTTGGCTA+TGG - Chr8:79725103-79725122 None:intergenic 40.0%
TTCATGTGATCATGTTCCTC+AGG + Chr8:79723061-79723080 MsG0880046904.01.T01:CDS 40.0%
TTTATTTGGAGGGTCGAGAA+AGG + Chr8:79724180-79724199 MsG0880046904.01.T01:CDS 40.0%
TTTGGTGAGTTTGAAGACGA+AGG + Chr8:79722310-79722329 MsG0880046904.01.T01:CDS 40.0%
TTTGTCTTGTGTCCATGTGT+GGG + Chr8:79722612-79722631 MsG0880046904.01.T01:intron 40.0%
! AACGGTTGTTATTCCTGCTT+TGG - Chr8:79725109-79725128 None:intergenic 40.0%
! AGTCAGTGGTTGACGTATTT+TGG + Chr8:79725687-79725706 MsG0880046904.01.T01:CDS 40.0%
! ATGTTAGCCTAGTCTCGATA+TGG + Chr8:79726031-79726050 MsG0880046904.01.T01:intron 40.0%
! CAGTTAGACAGCCTTATATC+AGG + Chr8:79723648-79723667 MsG0880046904.01.T01:CDS 40.0%
! CGGATTTTCTTGCAACTTCA+AGG - Chr8:79723270-79723289 None:intergenic 40.0%
! CTTCAGCCAATTTTCTTCCT+TGG - Chr8:79725795-79725814 None:intergenic 40.0%
! GATGTTCCTGGTGCTAATAA+TGG + Chr8:79724032-79724051 MsG0880046904.01.T01:intron 40.0%
! TGATGATGTCAAAAAGGCCA+TGG + Chr8:79724150-79724169 MsG0880046904.01.T01:CDS 40.0%
! TGGCCATGATGATGTCAAAA+AGG + Chr8:79724144-79724163 MsG0880046904.01.T01:CDS 40.0%
! TGGCCTTTTTGACATCATCA+TGG - Chr8:79724150-79724169 None:intergenic 40.0%
! TTGACACAGCATTTTCTCAC+AGG - Chr8:79725477-79725496 None:intergenic 40.0%
! TTTGTAGTTTGAAACTGCGG+CGG + Chr8:79722280-79722299 MsG0880046904.01.T01:intron 40.0%
!! AGATCTCTGATTTGGGGTTA+GGG - Chr8:79721891-79721910 None:intergenic 40.0%
!! ATGGCCTGTCTTTTATTTGG+AGG + Chr8:79724169-79724188 MsG0880046904.01.T01:CDS 40.0%
!! GGATATAGTTTGCTGTTCCA+TGG - Chr8:79725082-79725101 None:intergenic 40.0%
!! TAGATCTCTGATTTGGGGTT+AGG - Chr8:79721892-79721911 None:intergenic 40.0%
!! TGAATTTTTGGAGGATGGTG+TGG - Chr8:79722016-79722035 None:intergenic 40.0%
!! TGGCCTGTCTTTTATTTGGA+GGG + Chr8:79724170-79724189 MsG0880046904.01.T01:CDS 40.0%
AATGTTTCTCCAGACTGCAC+AGG + Chr8:79725284-79725303 MsG0880046904.01.T01:intron 45.0%
AATTGCTGCATCGAGGACTA+AGG + Chr8:79722945-79722964 MsG0880046904.01.T01:CDS 45.0%
ACAGGACAAGCTGCATTCAA+AGG - Chr8:79725459-79725478 None:intergenic 45.0%
ACCAATTACTGTAAGGCAGC+TGG + Chr8:79726255-79726274 MsG0880046904.01.T01:CDS 45.0%
ACCAGGAACATCTACAGATG+AGG - Chr8:79724024-79724043 None:intergenic 45.0%
ACCTGTGACTTTGCAGTAGA+TGG - Chr8:79724357-79724376 None:intergenic 45.0%
AGTTTGAAGACGAAGGTTGC+TGG + Chr8:79722317-79722336 MsG0880046904.01.T01:CDS 45.0%
ATTAAAGGAGGCAGCCAACA+AGG - Chr8:79723781-79723800 None:intergenic 45.0%
ATTCATCAGCTAGTGCAACG+AGG + Chr8:79725747-79725766 MsG0880046904.01.T01:CDS 45.0%
CAACAACACGAACTAACCTG+AGG - Chr8:79723080-79723099 None:intergenic 45.0%
CAACATGGCTGCTGATCATA+TGG + Chr8:79724255-79724274 MsG0880046904.01.T01:intron 45.0%
CAATATTGTCCTGTGCAGTC+TGG - Chr8:79725296-79725315 None:intergenic 45.0%
CACATGCTGAAAGCTGAGAA+CGG - Chr8:79725418-79725437 None:intergenic 45.0%
CAGCAGCCATGTTGAAAGTT+TGG - Chr8:79724249-79724268 None:intergenic 45.0%
CGACCCTCCAAATAAAAGAC+AGG - Chr8:79724176-79724195 None:intergenic 45.0%
CGGAGTTTAGAAGGAAGATC+AGG - Chr8:79722152-79722171 None:intergenic 45.0%
CTGTTCCATGGCTTCATGAA+TGG - Chr8:79725070-79725089 None:intergenic 45.0%
CTGTTTCGATGAGATCGCTT+GGG + Chr8:79722408-79722427 MsG0880046904.01.T01:CDS 45.0%
CTTGTTCAAACTGTAGTGCC+TGG + Chr8:79723429-79723448 MsG0880046904.01.T01:intron 45.0%
CTTTGTCTTGTGTCCATGTG+TGG + Chr8:79722611-79722630 MsG0880046904.01.T01:intron 45.0%
GAAGTTGCAAGAAAATCCGG+AGG + Chr8:79723271-79723290 MsG0880046904.01.T01:intron 45.0%
GCTGCTATCTTGGATTACAG+AGG - Chr8:79724783-79724802 None:intergenic 45.0%
GGAACATGATCACATGAACG+TGG - Chr8:79723059-79723078 None:intergenic 45.0%
GGAATTGAGCTAGTTGCAAC+AGG + Chr8:79722763-79722782 MsG0880046904.01.T01:intron 45.0%
GGATAACAATTGCTGCATCG+AGG + Chr8:79722938-79722957 MsG0880046904.01.T01:CDS 45.0%
TCACGATGTAGAAGAGTTGG+AGG - Chr8:79723496-79723515 None:intergenic 45.0%
TCCAGCTGCCTTACAGTAAT+TGG - Chr8:79726259-79726278 None:intergenic 45.0%
TCCATCTACTGCAAAGTCAC+AGG + Chr8:79724353-79724372 MsG0880046904.01.T01:CDS 45.0%
TCCTCATCTGTAGATGTTCC+TGG + Chr8:79724020-79724039 MsG0880046904.01.T01:intron 45.0%
TCTGTTTCGATGAGATCGCT+TGG + Chr8:79722407-79722426 MsG0880046904.01.T01:CDS 45.0%
TGCCACACACACAAATCAAG+AGG - Chr8:79725598-79725617 None:intergenic 45.0%
TGCTGGAGATACTGGTGATA+TGG + Chr8:79722334-79722353 MsG0880046904.01.T01:CDS 45.0%
TGTTTCGATGAGATCGCTTG+GGG + Chr8:79722409-79722428 MsG0880046904.01.T01:CDS 45.0%
TTATCTTGAAGGAGGAGCCA+TGG + Chr8:79724899-79724918 MsG0880046904.01.T01:CDS 45.0%
TTCATCAGCTAGTGCAACGA+GGG + Chr8:79725748-79725767 MsG0880046904.01.T01:CDS 45.0%
TTGTCGGGAACAATAAGCCA+CGG - Chr8:79723224-79723243 None:intergenic 45.0%
! AGGGCGTTATGATGACCTTA+AGG + Chr8:79725173-79725192 MsG0880046904.01.T01:CDS 45.0%
! CAGCCTTATATCAGGGTTGT+AGG + Chr8:79723656-79723675 MsG0880046904.01.T01:CDS 45.0%
! GACTTACAGTGCTGCTATCT+TGG - Chr8:79724793-79724812 None:intergenic 45.0%
! GCCATGGCCTGTCTTTTATT+TGG + Chr8:79724166-79724185 MsG0880046904.01.T01:CDS 45.0%
! TGATGATGTTGGAGACCGAT+CGG + Chr8:79726068-79726087 MsG0880046904.01.T01:intron 45.0%
! TTTCTAGGAAGCTCTCCAGT+TGG - Chr8:79723384-79723403 None:intergenic 45.0%
!! AAAATGTCAGGTTGGGACGA+AGG + Chr8:79721915-79721934 MsG0880046904.01.T01:exon 45.0%
!! ATGCTGACTCTCGAATGCTT+AGG + Chr8:79722742-79722761 MsG0880046904.01.T01:intron 45.0%
!! CAGCGCGAGTTTTATCTTGA+AGG + Chr8:79724888-79724907 MsG0880046904.01.T01:intron 45.0%
!! CGCGAGTTTTATCTTGAAGG+AGG + Chr8:79724891-79724910 MsG0880046904.01.T01:CDS 45.0%
!! CTTTTGAAGGACGTTCCAAC+TGG + Chr8:79723366-79723385 MsG0880046904.01.T01:intron 45.0%
!! TCTGATTTGGGGTTAGGGTT+CGG - Chr8:79721886-79721905 None:intergenic 45.0%
!! TGCCTCTTGATTTGTGTGTG+TGG + Chr8:79725593-79725612 MsG0880046904.01.T01:CDS 45.0%
!! TTTTTGGAGGATGGTGTGGT+TGG - Chr8:79722012-79722031 None:intergenic 45.0%
AACCTTGTCCCATTGATCCG+TGG + Chr8:79723204-79723223 MsG0880046904.01.T01:intron 50.0%
AATGGGACAAGGTTCTCTCC+AGG - Chr8:79723198-79723217 None:intergenic 50.0%
ACCAGAGGAAGAATATCGGC+AGG - Chr8:79722182-79722201 None:intergenic 50.0%
ACGAAGGTTGCTGGAGATAC+TGG + Chr8:79722326-79722345 MsG0880046904.01.T01:CDS 50.0%
AGGCGGCAAGCAAATGAAAC+TGG + Chr8:79726217-79726236 MsG0880046904.01.T01:CDS 50.0%
AGGTCATCATAACGCCCTGA+TGG - Chr8:79725171-79725190 None:intergenic 50.0%
CAAGCAGCATTTGCCAGATG+GGG + Chr8:79724290-79724309 MsG0880046904.01.T01:intron 50.0%
CCAGATGGGGTGAGATTAAG+AGG + Chr8:79724303-79724322 MsG0880046904.01.T01:CDS 50.0%
CCTCTTAATCTCACCCCATC+TGG - Chr8:79724306-79724325 None:intergenic 50.0%
CTTGGATTACAGAGGCTGTG+AGG - Chr8:79724775-79724794 None:intergenic 50.0%
GAATATCGGCAGGAGCAGAT+CGG - Chr8:79722172-79722191 None:intergenic 50.0%
GATATGGAAGATGCTGCTCC+TGG + Chr8:79722350-79722369 MsG0880046904.01.T01:CDS 50.0%
GCAAGCAGCATTTGCCAGAT+GGG + Chr8:79724289-79724308 MsG0880046904.01.T01:intron 50.0%
GGAAAAGGATCATCAGCTGC+TGG + Chr8:79724749-79724768 MsG0880046904.01.T01:CDS 50.0%
GGAAATGAAGCCAAGTCTCG+AGG + Chr8:79723689-79723708 MsG0880046904.01.T01:CDS 50.0%
GGAGCAGATCGGAGTTTAGA+AGG - Chr8:79722161-79722180 None:intergenic 50.0%
GGCAGCTGGAAGCTATTGTA+AGG + Chr8:79726269-79726288 MsG0880046904.01.T01:CDS 50.0%
GGTCATCATAACGCCCTGAT+GGG - Chr8:79725170-79725189 None:intergenic 50.0%
GGTTGCCATTCATGAAGCCA+TGG + Chr8:79725062-79725081 MsG0880046904.01.T01:CDS 50.0%
GTCATCATAACGCCCTGATG+GGG - Chr8:79725169-79725188 None:intergenic 50.0%
TATCGGAAGCTGCAGCAACA+AGG + Chr8:79725939-79725958 MsG0880046904.01.T01:CDS 50.0%
TCACATGTGTCGTGTCAGAC+CGG - Chr8:79722541-79722560 None:intergenic 50.0%
TCATCAGCTAGTGCAACGAG+GGG + Chr8:79725749-79725768 MsG0880046904.01.T01:CDS 50.0%
TCATCATAACGCCCTGATGG+GGG - Chr8:79725168-79725187 None:intergenic 50.0%
TCCTGCCGATATTCTTCCTC+TGG + Chr8:79722178-79722197 MsG0880046904.01.T01:CDS 50.0%
TGAATGCCACCCTCGTCTAT+CGG + Chr8:79725922-79725941 MsG0880046904.01.T01:CDS 50.0%
TGCAAGCAGCATTTGCCAGA+TGG + Chr8:79724288-79724307 MsG0880046904.01.T01:intron 50.0%
! TCTGGCAAATGCTGCTTGCA+AGG - Chr8:79724288-79724307 None:intergenic 50.0%
AACAACTGCTCCCCAAGTCC+TGG - Chr8:79723036-79723055 None:intergenic 55.0%
ACAGCGACCAAGCACACTCA+TGG + Chr8:79721949-79721968 MsG0880046904.01.T01:CDS 55.0%
ACCTCCATCTGCCAAGACCA+TGG - Chr8:79724919-79724938 None:intergenic 55.0%
AGCCACGGATCAATGGGACA+AGG - Chr8:79723209-79723228 None:intergenic 55.0%
AGGGGAAGCAAGTTCCGTGT+CGG + Chr8:79723010-79723029 MsG0880046904.01.T01:CDS 55.0%
ATAACGCCCTGATGGGGGAT+TGG - Chr8:79725163-79725182 None:intergenic 55.0%
CAAGCACACTCATGGGACGA+CGG + Chr8:79721957-79721976 MsG0880046904.01.T01:CDS 55.0%
CAGCGACCAAGCACACTCAT+GGG + Chr8:79721950-79721969 MsG0880046904.01.T01:CDS 55.0%
CTGCAGCTTCCGATAGACGA+GGG - Chr8:79725934-79725953 None:intergenic 55.0%
GAACAGGACTCCCGTTTCCA+AGG + Chr8:79725775-79725794 MsG0880046904.01.T01:CDS 55.0%
GAGGATGGTGTGGTTGGAGA+TGG - Chr8:79722006-79722025 None:intergenic 55.0%
GATGGTGTGGTTGGAGATGG+TGG - Chr8:79722003-79722022 None:intergenic 55.0%
TGAAGGAGGAGCCATGGTCT+TGG + Chr8:79724905-79724924 MsG0880046904.01.T01:CDS 55.0%
! GTGGTTGGAGATGGTGGCAT+CGG - Chr8:79721997-79722016 None:intergenic 55.0%
!! ATGTCAGGTTGGGACGAAGG+AGG + Chr8:79721918-79721937 MsG0880046904.01.T01:CDS 55.0%
CAGCTTCCGATAGACGAGGG+TGG - Chr8:79725931-79725950 None:intergenic 60.0%
CGTCGTCCCATGAGTGTGCT+TGG - Chr8:79721959-79721978 None:intergenic 60.0%
CTGCTGCCAATCCCCCATCA+GGG + Chr8:79725154-79725173 MsG0880046904.01.T01:CDS 60.0%
GCTGCAGCTTCCGATAGACG+AGG - Chr8:79725935-79725954 None:intergenic 60.0%
! AAGCAAGTTCCGTGTCGGCC+AGG + Chr8:79723015-79723034 MsG0880046904.01.T01:CDS 60.0%
! GCCATGGTCTTGGCAGATGG+AGG + Chr8:79724915-79724934 MsG0880046904.01.T01:CDS 60.0%
! GGAGCCATGGTCTTGGCAGA+TGG + Chr8:79724912-79724931 MsG0880046904.01.T01:CDS 60.0%
! TTCCGTGTCGGCCAGGACTT+GGG + Chr8:79723022-79723041 MsG0880046904.01.T01:CDS 60.0%
CGCAGTGGGACCTCGAGACT+TGG - Chr8:79723702-79723721 None:intergenic 65.0%
GCTGCTGCCAATCCCCCATC+AGG + Chr8:79725153-79725172 MsG0880046904.01.T01:CDS 65.0%
GTGCAACGAGGGGCGAGAAC+AGG + Chr8:79725759-79725778 MsG0880046904.01.T01:CDS 65.0%
TCCCCAAGTCCTGGCCGACA+CGG - Chr8:79723027-79723046 None:intergenic 65.0%
! AACTGCGGCGGCGCAGGTTT+TGG + Chr8:79722292-79722311 MsG0880046904.01.T01:CDS 65.0%
! GTTCCGTGTCGGCCAGGACT+TGG + Chr8:79723021-79723040 MsG0880046904.01.T01:CDS 65.0%
! GTTTGAAACTGCGGCGGCGC+AGG + Chr8:79722286-79722305 MsG0880046904.01.T01:intron 65.0%
! TCCGTGTCGGCCAGGACTTG+GGG + Chr8:79723023-79723042 MsG0880046904.01.T01:CDS 65.0%
!! TGGCATCGGTTTCGCCGCCA+CGG - Chr8:79721983-79722002 None:intergenic 65.0%
CACTCATGGGACGACGGCCG+TGG + Chr8:79721963-79721982 MsG0880046904.01.T01:CDS 70.0%
TCATGGGACGACGGCCGTGG+CGG + Chr8:79721966-79721985 MsG0880046904.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 79721862 79726324 79721862 ID=MsG0880046904.01;Name=MsG0880046904.01
Chr8 mRNA 79721862 79726324 79721862 ID=MsG0880046904.01.T01;Parent=MsG0880046904.01;Name=MsG0880046904.01.T01;_AED=0.51;_eAED=0.51;_QI=56|0.83|0.76|1|0.91|0.84|13|0|625
Chr8 exon 79721862 79722199 79721862 ID=MsG0880046904.01.T01:exon:34457;Parent=MsG0880046904.01.T01
Chr8 exon 79722287 79722430 79722287 ID=MsG0880046904.01.T01:exon:34458;Parent=MsG0880046904.01.T01
Chr8 exon 79722904 79723082 79722904 ID=MsG0880046904.01.T01:exon:34459;Parent=MsG0880046904.01.T01
Chr8 exon 79723631 79723736 79723631 ID=MsG0880046904.01.T01:exon:34460;Parent=MsG0880046904.01.T01
Chr8 exon 79724067 79724201 79724067 ID=MsG0880046904.01.T01:exon:34461;Parent=MsG0880046904.01.T01
Chr8 exon 79724297 79724374 79724297 ID=MsG0880046904.01.T01:exon:34462;Parent=MsG0880046904.01.T01
Chr8 exon 79724701 79724805 79724701 ID=MsG0880046904.01.T01:exon:34463;Parent=MsG0880046904.01.T01
Chr8 exon 79724891 79724982 79724891 ID=MsG0880046904.01.T01:exon:34464;Parent=MsG0880046904.01.T01
Chr8 exon 79725062 79725194 79725062 ID=MsG0880046904.01.T01:exon:34465;Parent=MsG0880046904.01.T01
Chr8 exon 79725297 79725489 79725297 ID=MsG0880046904.01.T01:exon:34466;Parent=MsG0880046904.01.T01
Chr8 exon 79725591 79725816 79725591 ID=MsG0880046904.01.T01:exon:34467;Parent=MsG0880046904.01.T01
Chr8 exon 79725901 79725991 79725901 ID=MsG0880046904.01.T01:exon:34468;Parent=MsG0880046904.01.T01
Chr8 exon 79726211 79726324 79726211 ID=MsG0880046904.01.T01:exon:34469;Parent=MsG0880046904.01.T01
Chr8 five_prime_UTR 79721862 79721917 79721862 ID=MsG0880046904.01.T01:five_prime_utr;Parent=MsG0880046904.01.T01
Chr8 CDS 79721918 79722199 79721918 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79722287 79722430 79722287 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79722904 79723082 79722904 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79723631 79723736 79723631 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79724067 79724201 79724067 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79724297 79724374 79724297 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79724701 79724805 79724701 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79724891 79724982 79724891 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79725062 79725194 79725062 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79725297 79725489 79725297 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79725591 79725816 79725591 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79725901 79725991 79725901 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Chr8 CDS 79726211 79726324 79726211 ID=MsG0880046904.01.T01:cds;Parent=MsG0880046904.01.T01
Gene Sequence

>MsG0880046904.01.T01

ATGTCAGGTTGGGACGAAGGAGGCGTATACTACAGCGACCAAGCACACTCATGGGACGACGGCCGTGGCGGCGAAACCGATGCCACCATCTCCAACCACACCATCCTCCAAAAATTCAAAGAATTCATCCGTAACTTTGAAACCGGTAACAATGTCTTCCCTTACAGAGAAAGCCTTCTTCACAATCCCAAATATCTTCTCGTTGATATGGAAGATCTCGACTCTTTTGACCCTGATCTTCCTTCTAAACTCCGATCTGCTCCTGCCGATATTCTTCCTCTGTTTGAAACTGCGGCGGCGCAGGTTTTGGTGAGTTTGAAGACGAAGGTTGCTGGAGATACTGGTGATATGGAAGATGCTGCTCCTGGTGATGTTCAGATTCTTCTTACTTCTAAGGAGGATTCTGTTTCGATGAGATCGCTTGGGGCTCAATACATTTCGAAGCTTGTTAAAATTGCTGGGATAACAATTGCTGCATCGAGGACTAAGGCAAAAGCAACATATGTGACCTTGATATGTAAGAATTGTAAGAAGGGGAAGCAAGTTCCGTGTCGGCCAGGACTTGGGGAGCAGTTGTTCCACGTTCATGTGATCATGTTCCTCAGCAACAAAGGAGCAGTTGCAGTTAGACAGCCTTATATCAGGGTTGTAGGAATAGAAGATGGAAATGAAGCCAAGTCTCGAGGTCCCACTGCGTTTACAAATGAAGAAATTGAAGAGTTCAAAAAATTTGCAGCTGATCATGATGTATACAAAAATATATGCTCCAAGATTGCTCCGTCTATATTTGGCCATGATGATGTCAAAAAGGCCATGGCCTGTCTTTTATTTGGAGGGTCGAGAAAGCATTTGCCAGATGGGGTGAGATTAAGAGGTGATATCAATGTGTTACTTCTCGGGGATCCATCTACTGCAAAGTCACAGTTTCTCAAGTTTGTTGAAAAGACTGCACCTATTGCTGTTTATACTTCTGGAAAAGGATCATCAGCTGCTGGCCTCACAGCCTCTGTAATCCAAGATAGCAGCACTCGCGAGTTTTATCTTGAAGGAGGAGCCATGGTCTTGGCAGATGGAGGTGTTGTCTGCATTGATGAGTTTGATAAGATGAGACCAGAAGATAGGGTTGCCATTCATGAAGCCATGGAACAGCAAACTATATCCATAGCCAAAGCAGGAATAACAACCGTTCTTAATTCAAGGACTTCTGTTCTTGCTGCTGCCAATCCCCCATCAGGGCGTTATGATGACCTTAAGACTGCACAGGACAATATTGATTTACAGACAACTATTCTTTCTAGGTTTGATTTAATCTTCATAGTGAAAGACATCAGAATGTACGAACAAGATAAGGTAACTTCAACTGTTTTTTTCACCGTTCTCAGCTTTCAGCATGTGATACTGTTTTTTTTGCTTCCTTTGAATGCAGCTTGTCCTGTGAGAAAATGCTCTTGCCTCTTGATTTGTGTGTGTGGCATTGAAGAACTAGTTTTGCAGACCATGCATAAATATATTTTACATGTCCAATTGTTTTCGATAGTTTTCAAGTCAGTGGTTGACGTATTTTGGTTTACAGATATAGCTAGTCATATCATCATAAAGGTTCATTCATCAGCTAGTGCAACGAGGGGCGAGAACAGGACTCCCGTTTCCAAGGAAGAAAATTGGCTGAAGAGGTACTTGCAATATTGTCGAACTGAATGCCACCCTCGTCTATCGGAAGCTGCAGCAACAAGGCTGCAAAATAATTATGTGAATATCAGACAGGATATGAGGCGGCAAGCAAATGAAACTGGAGAAGCGGCTGCAATACCAATTACTGTAAGGCAGCTGGAAGCTATTGTAAGGTTGAGTGAGTCACTTGCAAAGATGAAACTGTAA

Protein sequence

>MsG0880046904.01.T01

MSGWDEGGVYYSDQAHSWDDGRGGETDATISNHTILQKFKEFIRNFETGNNVFPYRESLLHNPKYLLVDMEDLDSFDPDLPSKLRSAPADILPLFETAAAQVLVSLKTKVAGDTGDMEDAAPGDVQILLTSKEDSVSMRSLGAQYISKLVKIAGITIAASRTKAKATYVTLICKNCKKGKQVPCRPGLGEQLFHVHVIMFLSNKGAVAVRQPYIRVVGIEDGNEAKSRGPTAFTNEEIEEFKKFAADHDVYKNICSKIAPSIFGHDDVKKAMACLLFGGSRKHLPDGVRLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIQDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYEQDKVTSTVFFTVLSFQHVILFFLLPLNAACPVRKCSCLLICVCGIEELVLQTMHKYILHVQLFSIVFKSVVDVFWFTDIASHIIIKVHSSASATRGENRTPVSKEENWLKRYLQYCRTECHPRLSEAAATRLQNNYVNIRQDMRRQANETGEAAAIPITVRQLEAIVRLSESLAKMKL*