AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024158.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024158.01.T01 MTR_5g006530 64.386 497 61 8 114 528 316 778 0.0 538
MsG0580024158.01.T01 MTR_5g006530 58.824 102 26 2 1 96 1 92 6.50e-23 103
MsG0580024158.01.T01 MTR_5g006530 64.386 497 61 8 114 528 92 554 0.0 538
MsG0580024158.01.T01 MTR_1g012020 28.536 403 206 13 198 525 450 845 5.21e-27 116
MsG0580024158.01.T01 MTR_1g103230 40.741 135 55 2 244 353 450 584 1.60e-21 98.6
MsG0580024158.01.T01 MTR_2g049305 37.815 119 70 2 189 304 28 145 2.25e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024158.01.T01 AT4G14770 41.826 471 170 16 115 525 225 651 4.80e-71 239
MsG0580024158.01.T01 AT4G14770 41.826 471 170 16 115 525 226 652 5.72e-71 239
MsG0580024158.01.T01 AT4G14770 41.826 471 170 16 115 525 245 671 8.65e-71 239
MsG0580024158.01.T01 AT3G22780 39.662 474 172 24 119 524 264 691 1.62e-62 217
MsG0580024158.01.T01 AT3G22760 39.177 462 180 22 115 527 76 485 8.53e-57 197
MsG0580024158.01.T01 AT3G22760 38.829 461 183 21 115 527 199 608 1.89e-55 196
MsG0580024158.01.T01 AT3G04850 50.847 118 33 3 239 331 460 577 2.02e-26 114

Find 118 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCACTGGTTCTGGATATT+TGG 0.157115 5:-1431394 MsG0580024158.01.T01:CDS
TCACCACCACGGAGAATTTC+TGG 0.214113 5:+1431294 None:intergenic
GATTGAGACCAAAGAGAATT+TGG 0.224349 5:+1431351 None:intergenic
TATCTTCTAACCCCAGTTTC+AGG 0.233911 5:+1432148 None:intergenic
CAACACCTTTACGGCTTTCC+AGG 0.273435 5:-1431569 MsG0580024158.01.T01:CDS
GCTGACTCTGTGCCTGAAAC+TGG 0.291755 5:-1432160 MsG0580024158.01.T01:CDS
TCAATCAATAATGGGACTAA+TGG 0.291824 5:+1431495 None:intergenic
TAGCTGACAAACAAAACATT+TGG 0.292259 5:+1431538 None:intergenic
GAACTAAGATCAATCAATAA+TGG 0.304902 5:+1431486 None:intergenic
GTTACAACCCTCACTGGTTC+TGG 0.305204 5:-1431402 MsG0580024158.01.T01:CDS
AGCAGATTAACTGGCTTTAT+AGG 0.305785 5:+1434715 None:intergenic
TTGCGAAACCAAATTCTCTT+TGG 0.309179 5:-1431359 MsG0580024158.01.T01:CDS
TGTACAGGTTCTGCTTCTAT+AGG 0.312813 5:-1431708 MsG0580024158.01.T01:intron
TCTTTAGCCTTTGATTCTTC+CGG 0.320531 5:+1434467 None:intergenic
TTTGAAGAACAGTATCTTCA+TGG 0.328335 5:+1432241 None:intergenic
ATTTCTGGCATTTCATCATC+TGG 0.343435 5:+1431309 None:intergenic
GTACAGGTTCTGCTTCTATA+GGG 0.354552 5:-1431707 MsG0580024158.01.T01:intron
CCCTTCACATCTGCAGCTAA+TGG 0.355774 5:+1431863 None:intergenic
CTGGGGTCTCAACACCTTTA+CGG 0.372102 5:-1431578 MsG0580024158.01.T01:CDS
AATATCATCTGAAAGAGAAT+TGG 0.381101 5:-1433059 MsG0580024158.01.T01:CDS
CTCTTCGCCTAACTGTGAAA+TGG 0.395894 5:-1431220 MsG0580024158.01.T01:CDS
AGCTGACAAACAAAACATTT+GGG 0.398685 5:+1431539 None:intergenic
GTTGAGACCCCAGCAGAATC+AGG 0.402631 5:+1431588 None:intergenic
AGTAATGTGAGCAGATTAAC+TGG 0.406760 5:+1434706 None:intergenic
TGGCTTTCCCTTTGATGAAA+AGG 0.412518 5:+1431437 None:intergenic
AACTAAGATCAATCAATAAT+GGG 0.415349 5:+1431487 None:intergenic
CTGTCACACACCGTGGCATT+CGG 0.418651 5:-1433404 MsG0580024158.01.T01:CDS
TTGATCTTAGTTCTTGCAAC+AGG 0.423040 5:-1431476 MsG0580024158.01.T01:CDS
TAGAGAGAGTGGTGTTGATC+TGG 0.424346 5:+1435649 None:intergenic
AATTCAGCCTCAACTGAATC+TGG 0.427053 5:+1434301 None:intergenic
CAATCAATAATGGGACTAAT+GGG 0.428574 5:+1431496 None:intergenic
GGCTTTCCCTTTGATGAAAA+GGG 0.433636 5:+1431438 None:intergenic
TTGTTGATATAGTTGAATAC+TGG 0.434917 5:+1434745 None:intergenic
CATCCCTCAATTTCTCCGAC+TGG 0.435335 5:+1432831 None:intergenic
TCTTCGCCTAACTGTGAAAT+GGG 0.439819 5:-1431219 MsG0580024158.01.T01:CDS
GAGGCTGAATTGCATCTTCA+AGG 0.440542 5:-1434289 MsG0580024158.01.T01:CDS
TCAGTAGCCATGTAAGCTAT+AGG 0.446368 5:+1432992 None:intergenic
TCTGCTTCTATAGGGATAGA+AGG 0.452212 5:-1431699 MsG0580024158.01.T01:CDS
AATTGGACCCATCCGACAAT+GGG 0.452280 5:-1433042 MsG0580024158.01.T01:CDS
GAAGGGTGCAAGAACGCATT+TGG 0.452291 5:-1431846 MsG0580024158.01.T01:CDS
GTGTTGATCTGGTTCCTCTC+TGG 0.453836 5:+1435660 None:intergenic
GAAGATCATCCTGATTCTGC+TGG 0.460122 5:-1431597 MsG0580024158.01.T01:CDS
CTGACTCTGTGCCTGAAACT+GGG 0.462110 5:-1432159 MsG0580024158.01.T01:CDS
AGAGCCAGTCGGAGAAATTG+AGG 0.468017 5:-1432835 MsG0580024158.01.T01:CDS
CATAGAACCTTGTTCCTGTC+AGG 0.475825 5:-1432283 MsG0580024158.01.T01:CDS
CTTCATCTCCAAATGGCAAA+AGG 0.482506 5:-1431245 MsG0580024158.01.T01:CDS
TAGCCATGTAAGCTATAGGC+TGG 0.482786 5:+1432996 None:intergenic
CCCTTTGATGAAAAGGGCAT+CGG 0.485976 5:+1431444 None:intergenic
CTCCTAGTCGCAGAGGTGGC+AGG 0.487950 5:-1431191 MsG0580024158.01.T01:CDS
CACCACTCTCTCTAAGTTCG+AGG 0.493672 5:-1435640 MsG0580024158.01.T01:intron
ATCAAAACTTCATCTCCAAA+TGG 0.504677 5:-1431252 MsG0580024158.01.T01:CDS
TAGCCTTTGATTCTTCCGGC+TGG 0.510192 5:+1434471 None:intergenic
AGAACAGTATCTTCATGGAT+AGG 0.511164 5:+1432246 None:intergenic
CAAGAACGCATTTGGTAGAA+AGG 0.511592 5:-1431838 MsG0580024158.01.T01:CDS
TTTGTTGAAGCATTCCTGAC+AGG 0.514321 5:+1432269 None:intergenic
TCCCCAGCCTATAGCTTACA+TGG 0.518437 5:-1432999 MsG0580024158.01.T01:CDS
GGCTGAACCCCATTGTCGGA+TGG 0.521823 5:+1433034 None:intergenic
GACGATCCCATTTCACAGTT+AGG 0.526872 5:+1431213 None:intergenic
TGCGATCTTCCTTCGCACAC+TGG 0.531010 5:+1433356 None:intergenic
AAGATCATCCTGATTCTGCT+GGG 0.531460 5:-1431596 MsG0580024158.01.T01:CDS
AGGGTTGTAACAAAAGATCT+TGG 0.531631 5:+1431414 None:intergenic
AAACATTTGGGTATCAAACC+TGG 0.541431 5:+1431551 None:intergenic
GCTGAACCCCATTGTCGGAT+GGG 0.544431 5:+1433035 None:intergenic
AGTAGGCTGAACCCCATTGT+CGG 0.545258 5:+1433030 None:intergenic
TAGGAATCTAGATTCCTTGA+GGG 0.545296 5:+1434619 None:intergenic
AACGCATTTGGTAGAAAGGA+TGG 0.546612 5:-1431834 MsG0580024158.01.T01:intron
GCGCTGTCTTGACTTTGAGA+TGG 0.547351 5:-1433379 MsG0580024158.01.T01:CDS
AGCCATGTAAGCTATAGGCT+GGG 0.550019 5:+1432997 None:intergenic
GCCTCATGTCACCTCCCTCA+AGG 0.551599 5:-1434633 MsG0580024158.01.T01:CDS
TAAGGGTGATGTGTGAGAGA+AGG 0.557637 5:+1431138 None:intergenic
GCCATGTAAGCTATAGGCTG+GGG 0.557913 5:+1432998 None:intergenic
GAATTGGACCCATCCGACAA+TGG 0.560509 5:-1433043 MsG0580024158.01.T01:CDS
TCCATTAGCTGCAGATGTGA+AGG 0.563119 5:-1431864 MsG0580024158.01.T01:CDS
TGACTCTGTGCCTGAAACTG+GGG 0.566690 5:-1432158 MsG0580024158.01.T01:CDS
GAGCCAGTCGGAGAAATTGA+GGG 0.568531 5:-1432834 MsG0580024158.01.T01:CDS
GTTGTAACAAAAGATCTTGG+TGG 0.570269 5:+1431417 None:intergenic
TCAAACCTGGAAAGCCGTAA+AGG 0.570767 5:+1431564 None:intergenic
TAACCAGCCGGAAGAATCAA+AGG 0.570940 5:-1434474 MsG0580024158.01.T01:CDS
CTCGAGTTTATTACCTGCGT+AGG 0.579058 5:+1434600 None:intergenic
TGAGGCGACGCGAAAACAGA+CGG 0.581467 5:+1434650 None:intergenic
TCCTTGAGGGAGGTGACATG+AGG 0.583987 5:+1434632 None:intergenic
GACTTTAGAGCAAATGCAAG+AGG 0.586731 5:+1432192 None:intergenic
AGACTGTGGTGTACTAGAGT+TGG 0.586929 5:+1433317 None:intergenic
AGAAACTAGTGACAAGGGTG+TGG 0.586951 5:-1431658 MsG0580024158.01.T01:CDS
TCACACACCGTGGCATTCGG+AGG 0.587057 5:-1433401 MsG0580024158.01.T01:CDS
AAGCATTCCTGACAGGAACA+AGG 0.596059 5:+1432276 None:intergenic
AACTAGTGACAAGGGTGTGG+AGG 0.596480 5:-1431655 MsG0580024158.01.T01:CDS
GACCTCGAACTTAGAGAGAG+TGG 0.597735 5:+1435638 None:intergenic
GAATTCATTATTTCAGACTG+TGG 0.599589 5:+1433303 None:intergenic
TTGAGATGGCCAGTGTGCGA+AGG 0.607118 5:-1433365 MsG0580024158.01.T01:CDS
AGGAATCTAGATTCCTACGC+AGG 0.613226 5:-1434613 MsG0580024158.01.T01:CDS
CAAATATCCAGAACCAGTGA+GGG 0.617109 5:+1431395 None:intergenic
TCGTCTCCTAGTCGCAGAGG+TGG 0.618263 5:-1431195 MsG0580024158.01.T01:CDS
CCATTAGCTGCAGATGTGAA+GGG 0.621617 5:-1431863 MsG0580024158.01.T01:CDS
AGATCATCCTGATTCTGCTG+GGG 0.627174 5:-1431595 MsG0580024158.01.T01:CDS
CCAAATATCCAGAACCAGTG+AGG 0.627791 5:+1431394 None:intergenic
TTCCTGCCACCTCTGCGACT+AGG 0.628203 5:+1431189 None:intergenic
GGCTGGGGACAATCTTCAGT+AGG 0.630869 5:+1433013 None:intergenic
GTAGGAATCTAGATTCCTTG+AGG 0.640124 5:+1434618 None:intergenic
AGAAACAGAAACTAGTGACA+AGG 0.642503 5:-1431664 MsG0580024158.01.T01:CDS
CAGGCACAGAGTCAGCACTT+CGG 0.643193 5:+1432167 None:intergenic
ACTTTAGAGCAAATGCAAGA+GGG 0.646644 5:+1432193 None:intergenic
TTTATCTAGACATAACCAGC+CGG 0.647804 5:-1434486 MsG0580024158.01.T01:intron
GAAACAGAAACTAGTGACAA+GGG 0.650767 5:-1431663 MsG0580024158.01.T01:CDS
TGTGTGAGAGAAGGAAACGA+TGG 0.651131 5:+1431147 None:intergenic
GAATCTAGATTCCTTGAGGG+AGG 0.652274 5:+1434622 None:intergenic
TTGTGTACCAGATTCAGTTG+AGG 0.661668 5:-1434308 MsG0580024158.01.T01:CDS
GACAGCGCCTCCGAATGCCA+CGG 0.667054 5:+1433394 None:intergenic
CTTGTTTCTGTCACACACCG+TGG 0.670686 5:-1433411 MsG0580024158.01.T01:CDS
AGGCGTAAGTCAGAGCCAGT+CGG 0.672763 5:-1432846 MsG0580024158.01.T01:CDS
GGATCGTCTCCTAGTCGCAG+AGG 0.678306 5:-1431198 MsG0580024158.01.T01:CDS
TATGAATATCAATATCAACA+TGG 0.695637 5:-1435688 MsG0580024158.01.T01:CDS
ATTGGACCCATCCGACAATG+GGG 0.707831 5:-1433041 MsG0580024158.01.T01:CDS
GGCGACGCGAAAACAGACGG+AGG 0.713947 5:+1434653 None:intergenic
ATGCCAGAAATTCTCCGTGG+TGG 0.726252 5:-1431297 MsG0580024158.01.T01:CDS
TAGGAGAGCTATCACCACCA+CGG 0.736061 5:+1431283 None:intergenic
TCAACATGGATACACCAGAG+AGG 0.777370 5:-1435674 MsG0580024158.01.T01:CDS
GAAATGCCAGAAATTCTCCG+TGG 0.824692 5:-1431300 MsG0580024158.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATATTAAGTAAATAAAAT+GGG + Chr5:1432035-1432054 None:intergenic 10.0%
!! AAATGAAAAATGAAAAATAG+AGG + Chr5:1431301-1431320 None:intergenic 15.0%
!! AATGAAAAATGAAAAATAGA+GGG + Chr5:1431300-1431319 None:intergenic 15.0%
!! AGTATGCTTTATAATATAAT+AGG + Chr5:1433135-1433154 None:intergenic 15.0%
!! ATAACTGAAAAAGAATAATA+TGG + Chr5:1434492-1434511 None:intergenic 15.0%
!! GGTATATTAAGTAAATAAAA+TGG + Chr5:1432036-1432055 None:intergenic 15.0%
!! GTATGCTTTATAATATAATA+GGG + Chr5:1433134-1433153 None:intergenic 15.0%
!! GTCTAGATAAATAAATAAAT+TGG + Chr5:1432329-1432348 None:intergenic 15.0%
!! GTTATAATATGAATTACTTA+TGG - Chr5:1434906-1434925 MsG0580024158.01.T01:intron 15.0%
!! AAATAAATTGTACTCAAATG+AGG - Chr5:1432395-1432414 MsG0580024158.01.T01:intron 20.0%
!! AACTAAGATCAATCAATAAT+GGG + Chr5:1435340-1435359 None:intergenic 20.0%
!! AAGAAAAATTGAAGAAGAAA+AGG + Chr5:1431252-1431271 None:intergenic 20.0%
!! AATAAATTGTACTCAAATGA+GGG - Chr5:1432396-1432415 MsG0580024158.01.T01:intron 20.0%
!! AATTAACATATTAGCAGAAT+TGG + Chr5:1432615-1432634 None:intergenic 20.0%
!! ACAAAAATTGATAAAAGGAA+TGG + Chr5:1435099-1435118 None:intergenic 20.0%
!! AGAAAAATTGAAGAAGAAAA+GGG + Chr5:1431251-1431270 None:intergenic 20.0%
!! ATAAAAAGAAATCAATGAGA+TGG + Chr5:1433932-1433951 None:intergenic 20.0%
!! ATTAACATATTAGCAGAATT+GGG + Chr5:1432614-1432633 None:intergenic 20.0%
!! GAAAAATTAAAAGATACCAA+AGG + Chr5:1431564-1431583 None:intergenic 20.0%
!! GATCAATTAAACATAGAAAA+TGG + Chr5:1434222-1434241 None:intergenic 20.0%
!! TAATTTATGTGTGTATATGT+AGG - Chr5:1431993-1432012 MsG0580024158.01.T01:intron 20.0%
!! TATCCAAAATTAAAGGAAAA+GGG + Chr5:1431588-1431607 None:intergenic 20.0%
!! TATTATACTTATACTAAGCT+TGG - Chr5:1433949-1433968 MsG0580024158.01.T01:intron 20.0%
!!! AAATTGGTAATCATTAGAAA+TGG + Chr5:1432313-1432332 None:intergenic 20.0%
!!! CATAACTTATTTAGTTTTCA+AGG + Chr5:1434152-1434171 None:intergenic 20.0%
!!! TAAGACAAATTTAAAGCTAA+TGG + Chr5:1435067-1435086 None:intergenic 20.0%
!!! TGTTTAATTGATCCTTTTTA+CGG - Chr5:1434229-1434248 MsG0580024158.01.T01:intron 20.0%
!!! TTCTTCGTTTTAGAAATTTT+TGG - Chr5:1431421-1431440 MsG0580024158.01.T01:CDS 20.0%
! AAACGAAAAACAGATGAAAA+AGG + Chr5:1434083-1434102 None:intergenic 25.0%
! AACAGTGTATCCAAAATTAA+AGG + Chr5:1431595-1431614 None:intergenic 25.0%
! AACGAAAAACAGATGAAAAA+GGG + Chr5:1434082-1434101 None:intergenic 25.0%
! AAGGAAATTAATCAAGTGAT+TGG + Chr5:1434417-1434436 None:intergenic 25.0%
! AATATCATCTGAAAGAGAAT+TGG - Chr5:1433765-1433784 MsG0580024158.01.T01:intron 25.0%
! AGCATTCACAATATTTCTTT+AGG + Chr5:1434842-1434861 None:intergenic 25.0%
! AGGAAATTAATCAAGTGATT+GGG + Chr5:1434416-1434435 None:intergenic 25.0%
! ATAAATTGTACTCAAATGAG+GGG - Chr5:1432397-1432416 MsG0580024158.01.T01:intron 25.0%
! ATCCAAAATTAAAGGAAAAG+GGG + Chr5:1431587-1431606 None:intergenic 25.0%
! CATATTATAACTGAAACTTG+AGG + Chr5:1434897-1434916 None:intergenic 25.0%
! CCTGTACAAAAATTGATAAA+AGG + Chr5:1435104-1435123 None:intergenic 25.0%
! GAACTAAGATCAATCAATAA+TGG + Chr5:1435341-1435360 None:intergenic 25.0%
! GAAGAAGCAATTAACATAAA+AGG + Chr5:1431367-1431386 None:intergenic 25.0%
! GTATCCAAAATTAAAGGAAA+AGG + Chr5:1431589-1431608 None:intergenic 25.0%
! GTCATTTAAATTCTACAGAA+TGG + Chr5:1434179-1434198 None:intergenic 25.0%
! TAATGAAACACATGCAAAAA+CGG + Chr5:1431275-1431294 None:intergenic 25.0%
! TCACTTGATTAATTTCCTTA+AGG - Chr5:1434418-1434437 MsG0580024158.01.T01:intron 25.0%
! TTGTTGATATAGTTGAATAC+TGG + Chr5:1432082-1432101 None:intergenic 25.0%
!! ACACTGCATTTTATTGTTTT+GGG - Chr5:1431692-1431711 MsG0580024158.01.T01:CDS 25.0%
!! CAAATTGAAAATTTGACTTC+TGG - Chr5:1433661-1433680 MsG0580024158.01.T01:intron 25.0%
!! CCTTTTATCAATTTTTGTAC+AGG - Chr5:1435101-1435120 MsG0580024158.01.T01:intron 25.0%
!! GTTTAATTGATCCTTTTTAC+GGG - Chr5:1434230-1434249 MsG0580024158.01.T01:intron 25.0%
!! TACACTGCATTTTATTGTTT+TGG - Chr5:1431691-1431710 MsG0580024158.01.T01:CDS 25.0%
!! TATGGTAGTTTTCTTTTGAA+GGG - Chr5:1434924-1434943 MsG0580024158.01.T01:intron 25.0%
!! TTATGGTAGTTTTCTTTTGA+AGG - Chr5:1434923-1434942 MsG0580024158.01.T01:intron 25.0%
!!! ACACTGCATTTTTTGTTTTT+GGG - Chr5:1431785-1431804 MsG0580024158.01.T01:intron 25.0%
!!! ACACTTACATTTTTTTCCTT+TGG - Chr5:1431545-1431564 MsG0580024158.01.T01:CDS 25.0%
!!! GTTAATTGATTTTGCTCTTT+AGG - Chr5:1431721-1431740 MsG0580024158.01.T01:intron 25.0%
!!! TACACTGCATTTTTTGTTTT+TGG - Chr5:1431784-1431803 MsG0580024158.01.T01:intron 25.0%
!!! TATGGCATTTTGTTTCTTTT+GGG - Chr5:1433292-1433311 MsG0580024158.01.T01:CDS 25.0%
!!! TTCATCTGTTTTTCGTTTTT+GGG - Chr5:1434085-1434104 MsG0580024158.01.T01:intron 25.0%
!!! TTTCATCTGTTTTTCGTTTT+TGG - Chr5:1434084-1434103 MsG0580024158.01.T01:intron 25.0%
AACTTGAGGTAAACATGATA+TGG + Chr5:1434883-1434902 None:intergenic 30.0%
AAGTGTGTTGTAATGTTGTA+TGG - Chr5:1433274-1433293 MsG0580024158.01.T01:CDS 30.0%
AATCCTGCATACATAACAAA+GGG + Chr5:1432057-1432076 None:intergenic 30.0%
ACTTAAAATCACTAAATCCG+AGG + Chr5:1431665-1431684 None:intergenic 30.0%
AGCTGACAAACAAAACATTT+GGG + Chr5:1435288-1435307 None:intergenic 30.0%
ATCAAAACTTCATCTCCAAA+TGG - Chr5:1435572-1435591 MsG0580024158.01.T01:intron 30.0%
ATGAGATCAGAAGATTTACA+TGG - Chr5:1432730-1432749 MsG0580024158.01.T01:intron 30.0%
ATTGAAGAAGAAAAGGGAAA+AGG + Chr5:1431245-1431264 None:intergenic 30.0%
CAAATGAGAAAATGGATAAG+AGG - Chr5:1432873-1432892 MsG0580024158.01.T01:intron 30.0%
CTTAAAATCACTAAATCCGA+GGG + Chr5:1431664-1431683 None:intergenic 30.0%
CTTCTTATCATCTTACTCAA+TGG - Chr5:1431383-1431402 MsG0580024158.01.T01:CDS 30.0%
GAAATATTGTGAATGCTATC+AGG - Chr5:1434845-1434864 MsG0580024158.01.T01:intron 30.0%
GAATTCATTATTTCAGACTG+TGG + Chr5:1433524-1433543 None:intergenic 30.0%
GTTCTGTTACAATCATTTCT+AGG - Chr5:1432975-1432994 MsG0580024158.01.T01:CDS 30.0%
TAGCTGACAAACAAAACATT+TGG + Chr5:1435289-1435308 None:intergenic 30.0%
TCATGGAAAAACACAATTAC+AGG + Chr5:1433015-1433034 None:intergenic 30.0%
TCCAAAATTAAAGGAAAAGG+GGG + Chr5:1431586-1431605 None:intergenic 30.0%
TGGCAATTCAAATGAGAAAA+TGG - Chr5:1432865-1432884 MsG0580024158.01.T01:intron 30.0%
TTGAAGAAGAAAAGGGAAAA+GGG + Chr5:1431244-1431263 None:intergenic 30.0%
TTTGAAGAACAGTATCTTCA+TGG + Chr5:1434586-1434605 None:intergenic 30.0%
! AAGATTTACATGGTTGATTC+AGG - Chr5:1432740-1432759 MsG0580024158.01.T01:intron 30.0%
! AATTGAAGCAGAAGCTTTTA+AGG - Chr5:1432631-1432650 MsG0580024158.01.T01:intron 30.0%
! ATTGAAGCAGAAGCTTTTAA+GGG - Chr5:1432632-1432651 MsG0580024158.01.T01:intron 30.0%
! CAATCAATAATGGGACTAAT+GGG + Chr5:1435331-1435350 None:intergenic 30.0%
! CCAAACAGAAGCATAATTTA+GGG + Chr5:1433254-1433273 None:intergenic 30.0%
! CTTCACTTACCTTTCTTTTT+GGG + Chr5:1433877-1433896 None:intergenic 30.0%
! GTTTTTGCTTAATTAACCCT+CGG - Chr5:1431645-1431664 MsG0580024158.01.T01:CDS 30.0%
! TCAATCAATAATGGGACTAA+TGG + Chr5:1435332-1435351 None:intergenic 30.0%
! TCCAAACAGAAGCATAATTT+AGG + Chr5:1433255-1433274 None:intergenic 30.0%
! TTCACTTACCTTTCTTTTTG+GGG + Chr5:1433876-1433895 None:intergenic 30.0%
!! AATTGATTTTGCTCTTGAGT+AGG - Chr5:1431817-1431836 MsG0580024158.01.T01:intron 30.0%
!! ATGGCATTTTGTTTCTTTTG+GGG - Chr5:1433293-1433312 MsG0580024158.01.T01:CDS 30.0%
!! CACTGCATTTTATTGTTTTG+GGG - Chr5:1431693-1431712 MsG0580024158.01.T01:CDS 30.0%
!! GTATGGCATTTTGTTTCTTT+TGG - Chr5:1433291-1433310 MsG0580024158.01.T01:CDS 30.0%
!!! CACTGCATTTTTTGTTTTTG+GGG - Chr5:1431786-1431805 MsG0580024158.01.T01:intron 30.0%
!!! TCATTTATTTTGCGACTTCT+AGG - Chr5:1431315-1431334 MsG0580024158.01.T01:CDS 30.0%
AAACATTTGGGTATCAAACC+TGG + Chr5:1435276-1435295 None:intergenic 35.0%
AAATCTTCTGATCTCATTCC+TGG + Chr5:1432727-1432746 None:intergenic 35.0%
AACCTGGCTGAAAAAAACTT+TGG + Chr5:1434364-1434383 None:intergenic 35.0%
AGAAACAGAAACTAGTGACA+AGG - Chr5:1435160-1435179 MsG0580024158.01.T01:intron 35.0%
AGAACAGTATCTTCATGGAT+AGG + Chr5:1434581-1434600 None:intergenic 35.0%
AGGGTTGTAACAAAAGATCT+TGG + Chr5:1435413-1435432 None:intergenic 35.0%
AGTAATGTGAGCAGATTAAC+TGG + Chr5:1432121-1432140 None:intergenic 35.0%
ATAATATGCAGCCCGTAAAA+AGG + Chr5:1434244-1434263 None:intergenic 35.0%
ATGTAGTTGTATGTTTCCCT+GGG - Chr5:1432944-1432963 MsG0580024158.01.T01:intron 35.0%
CAATGCTGCATATAACCTTA+AGG + Chr5:1434436-1434455 None:intergenic 35.0%
CCCTAAATTATGCTTCTGTT+TGG - Chr5:1433251-1433270 MsG0580024158.01.T01:intron 35.0%
CTTTGATTAACAGAGAGAAG+AGG + Chr5:1431759-1431778 None:intergenic 35.0%
GAAACAGAAACTAGTGACAA+GGG - Chr5:1435161-1435180 MsG0580024158.01.T01:intron 35.0%
GAATCCTGCATACATAACAA+AGG + Chr5:1432058-1432077 None:intergenic 35.0%
GAGAAAATGGATAAGAGGTA+AGG - Chr5:1432878-1432897 MsG0580024158.01.T01:intron 35.0%
GAGGTAAACATGATATGGTA+AGG + Chr5:1434878-1434897 None:intergenic 35.0%
GATTGAGACCAAAGAGAATT+TGG + Chr5:1435476-1435495 None:intergenic 35.0%
GCTAGGACAAGAAAAACTAA+TGG + Chr5:1434275-1434294 None:intergenic 35.0%
GGTTAATTTCAGTACCAGTA+TGG + Chr5:1434471-1434490 None:intergenic 35.0%
GTTGTAACAAAAGATCTTGG+TGG + Chr5:1435410-1435429 None:intergenic 35.0%
TAGGAATCTAGATTCCTTGA+GGG + Chr5:1432208-1432227 None:intergenic 35.0%
TATACTAAGCTTGGATATGC+AGG - Chr5:1433958-1433977 MsG0580024158.01.T01:intron 35.0%
TTGCGAAACCAAATTCTCTT+TGG - Chr5:1435465-1435484 MsG0580024158.01.T01:intron 35.0%
TTTATCTAGACATAACCAGC+CGG - Chr5:1432338-1432357 MsG0580024158.01.T01:intron 35.0%
TTTCCATGAGTTTATCCCAA+AGG - Chr5:1433026-1433045 MsG0580024158.01.T01:CDS 35.0%
TTTGCCTTTGTGATCCTTTA+CGG + Chr5:1433641-1433660 None:intergenic 35.0%
! ACTGTGATTTGTAGTCAATC+AGG - Chr5:1433209-1433228 MsG0580024158.01.T01:intron 35.0%
! ATACCCTTTGTTATGTATGC+AGG - Chr5:1432051-1432070 MsG0580024158.01.T01:intron 35.0%
! CTGTGATTTGTAGTCAATCA+GGG - Chr5:1433210-1433229 MsG0580024158.01.T01:intron 35.0%
! GCTTCACTTACCTTTCTTTT+TGG + Chr5:1433878-1433897 None:intergenic 35.0%
! TCTTTAGCCTTTGATTCTTC+CGG + Chr5:1432360-1432379 None:intergenic 35.0%
! TTGATCTTAGTTCTTGCAAC+AGG - Chr5:1435348-1435367 MsG0580024158.01.T01:intron 35.0%
!! ACTTTAGAGCAAATGCAAGA+GGG + Chr5:1434634-1434653 None:intergenic 35.0%
!! AGCAGATTAACTGGCTTTAT+AGG + Chr5:1432112-1432131 None:intergenic 35.0%
!! ATTTCTGGCATTTCATCATC+TGG + Chr5:1435518-1435537 None:intergenic 35.0%
!! GGAATTTTCAAGCATAAAGC+AGG + Chr5:1433911-1433930 None:intergenic 35.0%
!! TCCCCCTTTTCCTTTAATTT+TGG - Chr5:1431582-1431601 MsG0580024158.01.T01:CDS 35.0%
!!! TTTCAGCCAGGTTTTTTTAC+CGG - Chr5:1434371-1434390 MsG0580024158.01.T01:intron 35.0%
AACAGAACTCTCTAAACCCA+GGG + Chr5:1432963-1432982 None:intergenic 40.0%
AACGCATTTGGTAGAAAGGA+TGG - Chr5:1434990-1435009 MsG0580024158.01.T01:intron 40.0%
AAGAAGAAAAGGGAAAAGGG+AGG + Chr5:1431241-1431260 None:intergenic 40.0%
AAGATCATCCTGATTCTGCT+GGG - Chr5:1435228-1435247 MsG0580024158.01.T01:intron 40.0%
AATTCAGCCTCAACTGAATC+TGG + Chr5:1432526-1432545 None:intergenic 40.0%
ACAAAATCGCTGAGTCGTAT+AGG + Chr5:1432683-1432702 None:intergenic 40.0%
AGAAGAAAAGGGAAAAGGGA+GGG + Chr5:1431240-1431259 None:intergenic 40.0%
AGAGTAGCAATGATGTAGAG+TGG + Chr5:1433703-1433722 None:intergenic 40.0%
ATGCATGATTACAGAGAGAG+AGG + Chr5:1431856-1431875 None:intergenic 40.0%
CAAATATCCAGAACCAGTGA+GGG + Chr5:1435432-1435451 None:intergenic 40.0%
CAAGAACGCATTTGGTAGAA+AGG - Chr5:1434986-1435005 MsG0580024158.01.T01:intron 40.0%
CATGTAGTTGTATGTTTCCC+TGG - Chr5:1432943-1432962 MsG0580024158.01.T01:intron 40.0%
CTCAAGTGGTTAATGAACTC+CGG + Chr5:1434393-1434412 None:intergenic 40.0%
CTGGTACAATTGTTGTAGCA+GGG + Chr5:1432708-1432727 None:intergenic 40.0%
CTTCATCTCCAAATGGCAAA+AGG - Chr5:1435579-1435598 MsG0580024158.01.T01:intron 40.0%
GGACCTAGTAATCCAAACTT+TGG - Chr5:1434316-1434335 MsG0580024158.01.T01:CDS 40.0%
GGCAATGATAGTATGAGTAC+AGG - Chr5:1433060-1433079 MsG0580024158.01.T01:CDS 40.0%
GGCTTTCCCTTTGATGAAAA+GGG + Chr5:1435389-1435408 None:intergenic 40.0%
GTAGGAATCTAGATTCCTTG+AGG + Chr5:1432209-1432228 None:intergenic 40.0%
GTGAAAGTTCAGACTGTGAT+TGG - Chr5:1432578-1432597 MsG0580024158.01.T01:intron 40.0%
TAACAGAACTCTCTAAACCC+AGG + Chr5:1432964-1432983 None:intergenic 40.0%
TACCATGGTCTGCAATGTAA+GGG + Chr5:1435024-1435043 None:intergenic 40.0%
TATCTTCTAACCCCAGTTTC+AGG + Chr5:1434679-1434698 None:intergenic 40.0%
TCAGTAGCCATGTAAGCTAT+AGG + Chr5:1433835-1433854 None:intergenic 40.0%
TCTTCGCCTAACTGTGAAAT+GGG - Chr5:1435605-1435624 MsG0580024158.01.T01:intron 40.0%
TGAACTCCGGTAAAAAAACC+TGG + Chr5:1434380-1434399 None:intergenic 40.0%
TGACTTGAAGATGACCATAC+TGG - Chr5:1434454-1434473 MsG0580024158.01.T01:CDS 40.0%
TGCCTAGAAATCATGCCTTT+GGG + Chr5:1433044-1433063 None:intergenic 40.0%
TGGCCAAAGTTTGGATTACT+AGG + Chr5:1434322-1434341 None:intergenic 40.0%
TGGCTTTCCCTTTGATGAAA+AGG + Chr5:1435390-1435409 None:intergenic 40.0%
TGGTACAATTGTTGTAGCAG+GGG + Chr5:1432707-1432726 None:intergenic 40.0%
TTAAAGCTAATGGCCCTGAT+TGG + Chr5:1435057-1435076 None:intergenic 40.0%
TTCAAGTGTAAACCGATACC+CGG + Chr5:1433607-1433626 None:intergenic 40.0%
TTGCCTAGAAATCATGCCTT+TGG + Chr5:1433045-1433064 None:intergenic 40.0%
TTGTGTACCAGATTCAGTTG+AGG - Chr5:1432516-1432535 MsG0580024158.01.T01:intron 40.0%
! AGAGTACAAGACTGGTTGAA+GGG + Chr5:1434118-1434137 None:intergenic 40.0%
! ATCCCAAAGGCATGATTTCT+AGG - Chr5:1433039-1433058 MsG0580024158.01.T01:CDS 40.0%
! ATCGGATGATGTCATTTCTC+AGG - Chr5:1432489-1432508 MsG0580024158.01.T01:intron 40.0%
! GAAGAGATCCTTTTGCCATT+TGG + Chr5:1435590-1435609 None:intergenic 40.0%
! GAATTTGCGTACGTTTTGCA+GGG + Chr5:1433568-1433587 None:intergenic 40.0%
! GATACAAGAGAGTACAAGAC+TGG + Chr5:1434126-1434145 None:intergenic 40.0%
! GATGATGTCATTTCTCAGGA+AGG - Chr5:1432493-1432512 MsG0580024158.01.T01:intron 40.0%
! GTGCTGAGCAACTGATTTAT+CGG - Chr5:1432471-1432490 MsG0580024158.01.T01:intron 40.0%
! TATTGTGAGTGTTTTGCTGC+TGG - Chr5:1434509-1434528 MsG0580024158.01.T01:intron 40.0%
! TCTTTTGTTACAACCCTCAC+TGG - Chr5:1435416-1435435 MsG0580024158.01.T01:intron 40.0%
! TGCAGTTGCATCCTCTTTTA+TGG + Chr5:1434806-1434825 None:intergenic 40.0%
! TTTGTTGAAGCATTCCTGAC+AGG + Chr5:1434558-1434577 None:intergenic 40.0%
!! ATGCCTTTGGGATAAACTCA+TGG + Chr5:1433032-1433051 None:intergenic 40.0%
!! GAAGTTTTGATGCATGCGAT+AGG + Chr5:1435563-1435582 None:intergenic 40.0%
!! GACTTTAGAGCAAATGCAAG+AGG + Chr5:1434635-1434654 None:intergenic 40.0%
!! GGTAGTTTTCTTTTGAAGGG+TGG - Chr5:1434927-1434946 MsG0580024158.01.T01:intron 40.0%
!! TTTCTTTTGAAGGGTGGTGT+TGG - Chr5:1434933-1434952 MsG0580024158.01.T01:intron 40.0%
!! TTTTTCTTGTCCTAGCCTTC+CGG - Chr5:1434279-1434298 MsG0580024158.01.T01:intron 40.0%
!!! CTGAAGCTGGAGTTTTGTTT+GGG + Chr5:1434779-1434798 None:intergenic 40.0%
AACTTTCACCCTTGCGATGA+CGG + Chr5:1432567-1432586 None:intergenic 45.0%
AAGCATTCCTGACAGGAACA+AGG + Chr5:1434551-1434570 None:intergenic 45.0%
AATGATGTAGAGTGGTCAGG+TGG + Chr5:1433695-1433714 None:intergenic 45.0%
AATTGGACCCATCCGACAAT+GGG - Chr5:1433782-1433801 MsG0580024158.01.T01:intron 45.0%
ACGAGAGATGCTGATGTTCT+TGG + Chr5:1433733-1433752 None:intergenic 45.0%
AGAAACTAGTGACAAGGGTG+TGG - Chr5:1435166-1435185 MsG0580024158.01.T01:intron 45.0%
AGACTGTGGTGTACTAGAGT+TGG + Chr5:1433510-1433529 None:intergenic 45.0%
AGATCATCCTGATTCTGCTG+GGG - Chr5:1435229-1435248 MsG0580024158.01.T01:intron 45.0%
AGCAATGATGTAGAGTGGTC+AGG + Chr5:1433698-1433717 None:intergenic 45.0%
AGCACTTTCATGCAATTCCC+TGG + Chr5:1432456-1432475 None:intergenic 45.0%
AGCCATGTAAGCTATAGGCT+GGG + Chr5:1433830-1433849 None:intergenic 45.0%
AGGAATCTAGATTCCTACGC+AGG - Chr5:1432211-1432230 MsG0580024158.01.T01:CDS 45.0%
ATCAAGTGATTGGGCTCAAG+TGG + Chr5:1434407-1434426 None:intergenic 45.0%
ATGATGTAGAGTGGTCAGGT+GGG + Chr5:1433694-1433713 None:intergenic 45.0%
CAGAACAGCCCCAAAAAGAA+AGG - Chr5:1433865-1433884 MsG0580024158.01.T01:intron 45.0%
CATAGAACCTTGTTCCTGTC+AGG - Chr5:1434541-1434560 MsG0580024158.01.T01:intron 45.0%
CCAAATATCCAGAACCAGTG+AGG + Chr5:1435433-1435452 None:intergenic 45.0%
CCATTAGCTGCAGATGTGAA+GGG - Chr5:1434961-1434980 MsG0580024158.01.T01:intron 45.0%
CCTGCTACAACAATTGTACC+AGG - Chr5:1432706-1432725 MsG0580024158.01.T01:intron 45.0%
CCTGGTACAATTGTTGTAGC+AGG + Chr5:1432709-1432728 None:intergenic 45.0%
CTACCATGGTCTGCAATGTA+AGG + Chr5:1435025-1435044 None:intergenic 45.0%
CTCGAGTTTATTACCTGCGT+AGG + Chr5:1432227-1432246 None:intergenic 45.0%
CTCTTCGCCTAACTGTGAAA+TGG - Chr5:1435604-1435623 MsG0580024158.01.T01:intron 45.0%
CTTGTCTCTTGGCCAAAGTT+TGG + Chr5:1434331-1434350 None:intergenic 45.0%
GAAATGCCAGAAATTCTCCG+TGG - Chr5:1435524-1435543 MsG0580024158.01.T01:intron 45.0%
GAAGATCATCCTGATTCTGC+TGG - Chr5:1435227-1435246 MsG0580024158.01.T01:intron 45.0%
GAATCTAGATTCCTTGAGGG+AGG + Chr5:1432205-1432224 None:intergenic 45.0%
GACGATCCCATTTCACAGTT+AGG + Chr5:1435614-1435633 None:intergenic 45.0%
GAGGCTGAATTGCATCTTCA+AGG - Chr5:1432535-1432554 MsG0580024158.01.T01:intron 45.0%
GCCAAGAGACAAGTAAAGTC+TGG - Chr5:1434338-1434357 MsG0580024158.01.T01:intron 45.0%
GCCAGACTTTACTTGTCTCT+TGG + Chr5:1434342-1434361 None:intergenic 45.0%
GCTAATGGTTCTTCGATGAC+TGG - Chr5:1432845-1432864 MsG0580024158.01.T01:CDS 45.0%
GCTACCGTAAAGGATCACAA+AGG - Chr5:1433634-1433653 MsG0580024158.01.T01:intron 45.0%
GCTTTCGCGTCTTAATTCCA+GGG - Chr5:1432436-1432455 MsG0580024158.01.T01:intron 45.0%
GGTACAATTGTTGTAGCAGG+GGG + Chr5:1432706-1432725 None:intergenic 45.0%
GGTCTGATGCAGAAATCATC+AGG - Chr5:1432653-1432672 MsG0580024158.01.T01:intron 45.0%
TAACCAGCCGGAAGAATCAA+AGG - Chr5:1432350-1432369 MsG0580024158.01.T01:intron 45.0%
TAAGGGTGATGTGTGAGAGA+AGG + Chr5:1435689-1435708 None:intergenic 45.0%
TAGCCATGTAAGCTATAGGC+TGG + Chr5:1433831-1433850 None:intergenic 45.0%
TCAAACCTGGAAAGCCGTAA+AGG + Chr5:1435263-1435282 None:intergenic 45.0%
TCAACATGGATACACCAGAG+AGG - Chr5:1431150-1431169 MsG0580024158.01.T01:CDS 45.0%
TCCATTAGCTGCAGATGTGA+AGG - Chr5:1434960-1434979 MsG0580024158.01.T01:intron 45.0%
TCTCTCACACATCACCCTTA+GGG - Chr5:1435689-1435708 MsG0580024158.01.T01:CDS 45.0%
TGCACAGGACATCTTGCTAA+TGG - Chr5:1432830-1432849 MsG0580024158.01.T01:CDS 45.0%
TGTGTGAGAGAAGGAAACGA+TGG + Chr5:1435680-1435699 None:intergenic 45.0%
TTAGCAAGATGTCCTGTGCA+CGG + Chr5:1432830-1432849 None:intergenic 45.0%
TTCCCTTACATTGCAGACCA+TGG - Chr5:1435019-1435038 MsG0580024158.01.T01:intron 45.0%
TTCGCAAAGATGCATGTTGC+CGG - Chr5:1433585-1433604 MsG0580024158.01.T01:intron 45.0%
TTCTCTCACACATCACCCTT+AGG - Chr5:1435688-1435707 MsG0580024158.01.T01:CDS 45.0%
! CCCTTTGATGAAAAGGGCAT+CGG + Chr5:1435383-1435402 None:intergenic 45.0%
! CCGATGCCCTTTTCATCAAA+GGG - Chr5:1435380-1435399 MsG0580024158.01.T01:intron 45.0%
! CGAATTTGCGTACGTTTTGC+AGG + Chr5:1433569-1433588 None:intergenic 45.0%
! GAAAATGGTCGCAAAGTGCT+TGG + Chr5:1434207-1434226 None:intergenic 45.0%
! GAATGCACTTGCTACCGTAA+AGG - Chr5:1433624-1433643 MsG0580024158.01.T01:intron 45.0%
! GAATTAAGACGCGAAAGCGT+AGG + Chr5:1432434-1432453 None:intergenic 45.0%
! GAGAGTACAAGACTGGTTGA+AGG + Chr5:1434119-1434138 None:intergenic 45.0%
! TACGTTTTGCAGGGAGCAAT+TGG + Chr5:1433559-1433578 None:intergenic 45.0%
! TCCGATGCCCTTTTCATCAA+AGG - Chr5:1435379-1435398 MsG0580024158.01.T01:intron 45.0%
! TGGTTTCGCAAGCTTTTGAC+TGG + Chr5:1435456-1435475 None:intergenic 45.0%
!! CCTCACTGGTTCTGGATATT+TGG - Chr5:1435430-1435449 MsG0580024158.01.T01:intron 45.0%
!! TAGAGAGAGTGGTGTTGATC+TGG + Chr5:1431178-1431197 None:intergenic 45.0%
!!! GCTGAAGCTGGAGTTTTGTT+TGG + Chr5:1434780-1434799 None:intergenic 45.0%
!!! GGCCAAAGTTTTTTTCAGCC+AGG - Chr5:1434359-1434378 MsG0580024158.01.T01:intron 45.0%
!! GTAAAAAAAAAAAAAAAAAA+AGG + Chr5:1432256-1432275 None:intergenic 5.0%
AGAGCCAGTCGGAGAAATTG+AGG - Chr5:1433989-1434008 MsG0580024158.01.T01:intron 50.0%
AGATGCATGTTGCCGGGTAT+CGG - Chr5:1433592-1433611 MsG0580024158.01.T01:intron 50.0%
AGTAGGCTGAACCCCATTGT+CGG + Chr5:1433797-1433816 None:intergenic 50.0%
ATGCCAGAAATTCTCCGTGG+TGG - Chr5:1435527-1435546 MsG0580024158.01.T01:intron 50.0%
ATTGGACCCATCCGACAATG+GGG - Chr5:1433783-1433802 MsG0580024158.01.T01:intron 50.0%
ATTGGCGTTCCAAGCTACCA+TGG + Chr5:1435039-1435058 None:intergenic 50.0%
CAACACCTTTACGGCTTTCC+AGG - Chr5:1435255-1435274 MsG0580024158.01.T01:intron 50.0%
CACCACTCTCTCTAAGTTCG+AGG - Chr5:1431184-1431203 MsG0580024158.01.T01:CDS 50.0%
CATCCCTCAATTTCTCCGAC+TGG + Chr5:1433996-1434015 None:intergenic 50.0%
CATTGCAGACCATGGTAGCT+TGG - Chr5:1435027-1435046 MsG0580024158.01.T01:intron 50.0%
CCCTTCACATCTGCAGCTAA+TGG + Chr5:1434964-1434983 None:intergenic 50.0%
CCTTCCGGTTCTCAAAGGAA+GGG - Chr5:1434294-1434313 MsG0580024158.01.T01:CDS 50.0%
CGCTTTCGCGTCTTAATTCC+AGG - Chr5:1432435-1432454 MsG0580024158.01.T01:intron 50.0%
CTCTCACACATCACCCTTAG+GGG - Chr5:1435690-1435709 MsG0580024158.01.T01:CDS 50.0%
CTGACTCTGTGCCTGAAACT+GGG - Chr5:1434665-1434684 MsG0580024158.01.T01:CDS 50.0%
CTGGGGTCTCAACACCTTTA+CGG - Chr5:1435246-1435265 MsG0580024158.01.T01:intron 50.0%
CTTCCGGTTCTCAAAGGAAG+GGG - Chr5:1434295-1434314 MsG0580024158.01.T01:CDS 50.0%
GAATTGGACCCATCCGACAA+TGG - Chr5:1433781-1433800 MsG0580024158.01.T01:intron 50.0%
GACCTCGAACTTAGAGAGAG+TGG + Chr5:1431189-1431208 None:intergenic 50.0%
GAGCCAGTCGGAGAAATTGA+GGG - Chr5:1433990-1434009 MsG0580024158.01.T01:intron 50.0%
GCCATGTAAGCTATAGGCTG+GGG + Chr5:1433829-1433848 None:intergenic 50.0%
GCTTCAGCACGCCATAAAAG+AGG - Chr5:1434792-1434811 MsG0580024158.01.T01:intron 50.0%
GTAGCTTGGAACGCCAATCA+GGG - Chr5:1435041-1435060 MsG0580024158.01.T01:intron 50.0%
TAGCCTTTGATTCTTCCGGC+TGG + Chr5:1432356-1432375 None:intergenic 50.0%
TAGGAGAGCTATCACCACCA+CGG + Chr5:1435544-1435563 None:intergenic 50.0%
TCACCACCACGGAGAATTTC+TGG + Chr5:1435533-1435552 None:intergenic 50.0%
TCCCCAGCCTATAGCTTACA+TGG - Chr5:1433825-1433844 MsG0580024158.01.T01:intron 50.0%
TCGCAAAGATGCATGTTGCC+GGG - Chr5:1433586-1433605 MsG0580024158.01.T01:intron 50.0%
TGACTCTGTGCCTGAAACTG+GGG - Chr5:1434666-1434685 MsG0580024158.01.T01:CDS 50.0%
! AACTAGTGACAAGGGTGTGG+AGG - Chr5:1435169-1435188 MsG0580024158.01.T01:intron 50.0%
! CTTTTATGGCGTGCTGAAGC+TGG + Chr5:1434792-1434811 None:intergenic 50.0%
! GAAGGGTGCAAGAACGCATT+TGG - Chr5:1434978-1434997 MsG0580024158.01.T01:intron 50.0%
! GCGCTGTCTTGACTTTGAGA+TGG - Chr5:1433445-1433464 MsG0580024158.01.T01:intron 50.0%
! GTGTTGATCTGGTTCCTCTC+TGG + Chr5:1431167-1431186 None:intergenic 50.0%
!! CTTGTTTCTGTCACACACCG+TGG - Chr5:1433413-1433432 MsG0580024158.01.T01:CDS 50.0%
!! GTTACAACCCTCACTGGTTC+TGG - Chr5:1435422-1435441 MsG0580024158.01.T01:intron 50.0%
AGGCGTAAGTCAGAGCCAGT+CGG - Chr5:1433978-1433997 MsG0580024158.01.T01:intron 55.0%
CAGGCACAGAGTCAGCACTT+CGG + Chr5:1434660-1434679 None:intergenic 55.0%
CTGTCACACACCGTGGCATT+CGG - Chr5:1433420-1433439 MsG0580024158.01.T01:intron 55.0%
GCCTTCCGGTTCTCAAAGGA+AGG - Chr5:1434293-1434312 MsG0580024158.01.T01:CDS 55.0%
GCTGAACCCCATTGTCGGAT+GGG + Chr5:1433792-1433811 None:intergenic 55.0%
GGCTGGGGACAATCTTCAGT+AGG + Chr5:1433814-1433833 None:intergenic 55.0%
GGTAGCTTGGAACGCCAATC+AGG - Chr5:1435040-1435059 MsG0580024158.01.T01:intron 55.0%
GTTGAGACCCCAGCAGAATC+AGG + Chr5:1435239-1435258 None:intergenic 55.0%
TCCTTGAGGGAGGTGACATG+AGG + Chr5:1432195-1432214 None:intergenic 55.0%
TGAGGCGACGCGAAAACAGA+CGG + Chr5:1432177-1432196 None:intergenic 55.0%
TGCGATCTTCCTTCGCACAC+TGG + Chr5:1433471-1433490 None:intergenic 55.0%
TTCCGAGCTAGTAGCCGCAA+CGG - Chr5:1432797-1432816 MsG0580024158.01.T01:CDS 55.0%
TTGAGATGGCCAGTGTGCGA+AGG - Chr5:1433459-1433478 MsG0580024158.01.T01:intron 55.0%
! CCCTTCCTTTGAGAACCGGA+AGG + Chr5:1434297-1434316 None:intergenic 55.0%
! CCTAGCCTTCCGGTTCTCAA+AGG - Chr5:1434289-1434308 MsG0580024158.01.T01:CDS 55.0%
! CCTTTGAGAACCGGAAGGCT+AGG + Chr5:1434292-1434311 None:intergenic 55.0%
! GCTGACTCTGTGCCTGAAAC+TGG - Chr5:1434664-1434683 MsG0580024158.01.T01:CDS 55.0%
! GGTCCCCTTCCTTTGAGAAC+CGG + Chr5:1434301-1434320 None:intergenic 55.0%
!! AGGACTAGTCCGTCATCGCA+AGG - Chr5:1432555-1432574 MsG0580024158.01.T01:intron 55.0%
!! GGACTAGTCCGTCATCGCAA+GGG - Chr5:1432556-1432575 MsG0580024158.01.T01:intron 55.0%
AACGGACACTGACCGTGCAC+AGG - Chr5:1432815-1432834 MsG0580024158.01.T01:CDS 60.0%
GCCTCATGTCACCTCCCTCA+AGG - Chr5:1432191-1432210 MsG0580024158.01.T01:CDS 60.0%
GGATCGTCTCCTAGTCGCAG+AGG - Chr5:1435626-1435645 MsG0580024158.01.T01:intron 60.0%
GGCTGAACCCCATTGTCGGA+TGG + Chr5:1433793-1433812 None:intergenic 60.0%
GTCCGTTGCGGCTACTAGCT+CGG + Chr5:1432802-1432821 None:intergenic 60.0%
TCACACACCGTGGCATTCGG+AGG - Chr5:1433423-1433442 MsG0580024158.01.T01:intron 60.0%
TCGTCTCCTAGTCGCAGAGG+TGG - Chr5:1435629-1435648 MsG0580024158.01.T01:intron 60.0%
TGCACGGTCAGTGTCCGTTG+CGG + Chr5:1432814-1432833 None:intergenic 60.0%
TTCCTGCCACCTCTGCGACT+AGG + Chr5:1435638-1435657 None:intergenic 60.0%
CTCCTAGTCGCAGAGGTGGC+AGG - Chr5:1435633-1435652 MsG0580024158.01.T01:intron 65.0%
GACAGCGCCTCCGAATGCCA+CGG + Chr5:1433433-1433452 None:intergenic 65.0%
GGCGACGCGAAAACAGACGG+AGG + Chr5:1432174-1432193 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 1431137 1435709 1431137 ID=MsG0580024158.01;Name=MsG0580024158.01
Chr5 mRNA 1431137 1435709 1431137 ID=MsG0580024158.01.T01;Parent=MsG0580024158.01;Name=MsG0580024158.01.T01;_AED=0.34;_eAED=0.41;_QI=0|0.22|0.1|1|0.77|0.8|10|0|528
Chr5 exon 1435641 1435709 1435641 ID=MsG0580024158.01.T01:exon:472;Parent=MsG0580024158.01.T01
Chr5 exon 1434601 1434773 1434601 ID=MsG0580024158.01.T01:exon:471;Parent=MsG0580024158.01.T01
Chr5 exon 1434454 1434499 1434454 ID=MsG0580024158.01.T01:exon:470;Parent=MsG0580024158.01.T01
Chr5 exon 1434285 1434335 1434285 ID=MsG0580024158.01.T01:exon:469;Parent=MsG0580024158.01.T01
Chr5 exon 1433271 1433433 1433271 ID=MsG0580024158.01.T01:exon:468;Parent=MsG0580024158.01.T01
Chr5 exon 1432960 1433103 1432960 ID=MsG0580024158.01.T01:exon:467;Parent=MsG0580024158.01.T01
Chr5 exon 1432782 1432866 1432782 ID=MsG0580024158.01.T01:exon:466;Parent=MsG0580024158.01.T01
Chr5 exon 1432137 1432338 1432137 ID=MsG0580024158.01.T01:exon:465;Parent=MsG0580024158.01.T01
Chr5 exon 1431835 1431901 1431835 ID=MsG0580024158.01.T01:exon:464;Parent=MsG0580024158.01.T01
Chr5 exon 1431137 1431723 1431137 ID=MsG0580024158.01.T01:exon:463;Parent=MsG0580024158.01.T01
Chr5 CDS 1435641 1435709 1435641 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1434601 1434773 1434601 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1434454 1434499 1434454 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1434285 1434335 1434285 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1433271 1433433 1433271 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1432960 1433103 1432960 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1432782 1432866 1432782 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1432137 1432338 1432137 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1431835 1431901 1431835 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Chr5 CDS 1431137 1431723 1431137 ID=MsG0580024158.01.T01:cds;Parent=MsG0580024158.01.T01
Gene Sequence

>MsG0580024158.01.T01

ATGAATATCAATATCAACATGGATACACCAGAGAGGAACCAGATCAACACCACTCTCTCTAAGTTCGAGGATTCACCAGTATTCAACTATATCAACAATTTATCTCCTATAAAGCCAGTTAATCTGCTCACATTACTCAGACTTTCAATTCACTTAGCTTTTCATCGCCTCCGTCTGTTTTCGCGTCGCCTCATGTCACCTCCCTCAAGGAATCTAGATTCCTACGCAGGTAATAAACTCGAACATAACCAGCCGGAAGAATCAAAGGCTAAAGATTCATCTGAAGATGAAGGTTGTGTACCAGATTCAGTTGAGGCTGAATTGCATCTTCAAGGACTACTTGTTTCTGTCACACACCGTGGCATTCGGAGGCGCTGTCTTGACTTTGAGATGGCCAGTGTGCGAAGGAAGATCGCAGATGATAATTCAAACACCAACTCTAGTACACCACAGTCTGAAATAATGAATTCTGTTAATGAAAACCAATTGCTCCCTGCAAAACCATCTCTCGTCGTATCTGTATCAATATCATCTGAAAGAGAATTGGACCCATCCGACAATGGGGTTCAGCCTACTGAAGATTGTCCCCAGCCTATAGCTTACATGGCTACTGAAGATTTCAATCAGAACAGCCCCAAAAAGAAAGGCGTAAGTCAGAGCCAGTCGGAGAAATTGAGGGATGCAAACGTTGTAATTGCAAGAAATCAAAATGCTTCAAAATGCTTGAAGCTTTATTGTGAGTGTTTTGCTGCTGGTGTCTACTGCATAGAACCTTGTTCCTGTCAGGAATGCTTCAACAAACCTATCCATGAAGATACTGTTCTTCAAACTCGCAAGCAAATTGAATCTCGCAACCCTCTTGCATTTGCTCTAAAGTCATCCGAAGTGCTGACTCTGTGCCTGAAACTGGGGTTAGAAGATAAATCAAATTTAGGTGGTGTTGGTTGCTCCATTAGCTGCAGATGTGAAGGGTGCAAGAACGCATTTGGTAGAAAGGATGGTTCTGCTTCTATAGGGATAGAAGGTGAGACAGAAGAAGAAACAGAAACTAGTGACAAGGGTGTGGAGGAAAAAGCTATTCAAAAAACTGAAATTCAGAATATCGAAGATCATCCTGATTCTGCTGGGGTCTCAACACCTTTACGGCTTTCCAGGTTTGATACCCAAATGTTTTGTTTGTCAGCTAAAGATTGCAAATTTGACGTCCCATTAGTCCCATTATTGATTGATCTTAGTTCTTGCAACAGGTCATTGCTTCCGATGCCCTTTTCATCAAAGGGAAAGCCACCAAGATCTTTTGTTACAACCCTCACTGGTTCTGGATATTTGGCCAGTCAAAAGCTTGCGAAACCAAATTCTCTTTGGTCTCAATCTAAGACTTTTCAGACTGTTCCAGATGATGAAATGCCAGAAATTCTCCGTGGTGGTGATAGCTCTCCTATCGCATGCATCAAAACTTCATCTCCAAATGGCAAAAGGATCTCTTCGCCTAACTGTGAAATGGGATCGTCTCCTAGTCGCAGAGGTGGCAGGAAGTTGATATTACAATCTATTCCATCGTTTCCTTCTCTCACACATCACCCTTAG

Protein sequence

>MsG0580024158.01.T01

MNININMDTPERNQINTTLSKFEDSPVFNYINNLSPIKPVNLLTLLRLSIHLAFHRLRLFSRRLMSPPSRNLDSYAGNKLEHNQPEESKAKDSSEDEGCVPDSVEAELHLQGLLVSVTHRGIRRRCLDFEMASVRRKIADDNSNTNSSTPQSEIMNSVNENQLLPAKPSLVVSVSISSERELDPSDNGVQPTEDCPQPIAYMATEDFNQNSPKKKGVSQSQSEKLRDANVVIARNQNASKCLKLYCECFAAGVYCIEPCSCQECFNKPIHEDTVLQTRKQIESRNPLAFALKSSEVLTLCLKLGLEDKSNLGGVGCSISCRCEGCKNAFGRKDGSASIGIEGETEEETETSDKGVEEKAIQKTEIQNIEDHPDSAGVSTPLRLSRFDTQMFCLSAKDCKFDVPLVPLLIDLSSCNRSLLPMPFSSKGKPPRSFVTTLTGSGYLASQKLAKPNSLWSQSKTFQTVPDDEMPEILRGGDSSPIACIKTSSPNGKRISSPNCEMGSSPSRRGGRKLILQSIPSFPSLTHHP*