AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008456.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008456.01.T01 MTR_2g043370 88.362 232 15 2 1 220 1 232 1.96e-131 370
MsG0280008456.01.T01 MTR_7g076600 37.662 231 118 5 16 220 30 260 2.41e-44 150
MsG0280008456.01.T01 MTR_1g047620 35.152 165 86 3 16 177 30 176 3.39e-32 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 136 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAATGATGTCCTATAAAA+AGG 0.169383 2:+32205500 MsG0280008456.01.T01:three_prime_UTR
GTCAACTGTGTCAAGTATTA+TGG 0.196349 2:+32205006 MsG0280008456.01.T01:three_prime_UTR
TCTACAAGGACCTATATTTA+AGG 0.204598 2:-32204423 None:intergenic
ACCAAATGCTATTGTTTATA+AGG 0.204733 2:+32201814 MsG0280008456.01.T01:CDS
TGAAATAATTAGAGATAATT+TGG 0.209160 2:+32205449 MsG0280008456.01.T01:three_prime_UTR
GAGGCTCAACTTGCACTTCT+AGG 0.227274 2:-32205942 None:intergenic
CTTATACTAGCTTGGGGAAT+TGG 0.229181 2:+32201713 MsG0280008456.01.T01:CDS
ACTTACGCCTATATTTCTTT+AGG 0.237510 2:-32206109 None:intergenic
GGGTACTTGCAATCCCTTTC+CGG 0.247628 2:+32203295 MsG0280008456.01.T01:intron
TACCTTAGAGAAGGGTTTAT+TGG 0.262362 2:+32201580 MsG0280008456.01.T01:CDS
CTTACGCCTATATTTCTTTA+GGG 0.272754 2:-32206108 None:intergenic
GACGCGATAGCGAAAACTTA+TGG 0.274965 2:+32204166 MsG0280008456.01.T01:three_prime_UTR
CCGGTACCGTTTCCATGTTT+TGG 0.290443 2:+32202695 MsG0280008456.01.T01:CDS
GTGCTACTATTACTTCATTA+TGG 0.297463 2:+32205912 MsG0280008456.01.T01:three_prime_UTR
TTAGAAGGTTTATACTTAGA+AGG 0.299806 2:+32201762 MsG0280008456.01.T01:CDS
TCTCATTTCTCATGTTTGAT+AGG 0.309735 2:-32203540 None:intergenic
TTTCTATCGTAATAGTTATT+GGG 0.324651 2:+32205413 MsG0280008456.01.T01:three_prime_UTR
TATGGGGTCGCTTCTGTAAC+TGG 0.325492 2:+32204184 MsG0280008456.01.T01:three_prime_UTR
AATACCTTCTTGAAAGCATT+AGG 0.326852 2:-32203397 None:intergenic
TTGAAAATGTTGGAGTTAGA+AGG 0.334068 2:+32203335 MsG0280008456.01.T01:CDS
AGTGTCGTTTGTTGTTCATT+AGG 0.345153 2:+32204558 MsG0280008456.01.T01:three_prime_UTR
TGCAGCATCGTTTCAAGAAA+TGG 0.345990 2:+32201637 MsG0280008456.01.T01:CDS
TGCTTTATGTACCAGTTAGA+AGG 0.346663 2:+32201747 MsG0280008456.01.T01:CDS
ATGCATTGGCATGCATAATA+AGG 0.349299 2:+32204984 MsG0280008456.01.T01:three_prime_UTR
TCGCTTCTGTAACTGGATAT+TGG 0.351347 2:+32204191 MsG0280008456.01.T01:three_prime_UTR
TTCCTCTGATATAGATATAA+TGG 0.357802 2:-32205866 None:intergenic
AAACAATAGCATTTGGTGTA+AGG 0.358216 2:-32201808 None:intergenic
TTATACTAGCTTGGGGAATT+GGG 0.370901 2:+32201714 MsG0280008456.01.T01:CDS
CATCATCCCTAAAGAAATAT+AGG 0.372037 2:+32206102 MsG0280008456.01.T01:three_prime_UTR
AAAGAAATAATTTATGTACT+TGG 0.375040 2:+32205473 MsG0280008456.01.T01:three_prime_UTR
ACGCGATAGCGAAAACTTAT+GGG 0.377106 2:+32204167 MsG0280008456.01.T01:three_prime_UTR
TTCCAATAAACCCTTCTCTA+AGG 0.377454 2:-32201582 None:intergenic
CACTGTTACTTATACTAGCT+TGG 0.384549 2:+32201705 MsG0280008456.01.T01:CDS
TTACATCCGTCCTTAAATAT+AGG 0.385509 2:+32204413 MsG0280008456.01.T01:three_prime_UTR
ACTGTTACTTATACTAGCTT+GGG 0.388683 2:+32201706 MsG0280008456.01.T01:CDS
CAGTGACGATGTTAAAATCT+TGG 0.391514 2:+32203363 MsG0280008456.01.T01:CDS
ACCTTATAAACAATAGCATT+TGG 0.403086 2:-32201815 None:intergenic
AAATTATTTATATTAACAAT+AGG 0.406078 2:-32206310 None:intergenic
AAAGTATCCATTGTACAGTT+TGG 0.406355 2:-32201679 None:intergenic
TATCTTGACATAGCTTGTAT+TGG 0.420112 2:+32206227 MsG0280008456.01.T01:three_prime_UTR
AAATGCGGTCAAAGTAAGTT+AGG 0.422925 2:-32204831 None:intergenic
AAATAGCAGTCGTCCTACTA+AGG 0.426407 2:-32204746 None:intergenic
GTAGCACTAATAATATTTGT+TGG 0.429027 2:-32205896 None:intergenic
TGCAGTATTGAGCATTTGTT+GGG 0.434149 2:+32206063 MsG0280008456.01.T01:three_prime_UTR
TCTCTTAGAATTGAAAATGT+TGG 0.435318 2:+32203325 MsG0280008456.01.T01:CDS
CTAAGTATAAACCTTCTAAC+TGG 0.436790 2:-32201758 None:intergenic
CAGGAGTGAGACGGGGAGAA+AGG 0.441459 2:+32205117 MsG0280008456.01.T01:three_prime_UTR
TAGTTGCTGCTACTATAGTT+TGG 0.444814 2:+32206186 MsG0280008456.01.T01:three_prime_UTR
AGCAGCCGTGACATCTGTTA+TGG 0.451116 2:+32205279 MsG0280008456.01.T01:three_prime_UTR
AATGACTGCAGGAGTGAGAC+GGG 0.452063 2:+32205109 MsG0280008456.01.T01:three_prime_UTR
TCAAATGGGTCATCTATTGC+GGG 0.455970 2:-32204792 None:intergenic
TGAAATTTAATCTCACATCT+AGG 0.461784 2:-32205704 None:intergenic
CAATCTATAGTTTCCGTCGT+TGG 0.466680 2:-32204291 None:intergenic
GGAAGTTGGAAGCTCTGTTA+AGG 0.468716 2:+32203858 MsG0280008456.01.T01:CDS
AGAAAGTAAACGCTGCATAT+AGG 0.471749 2:+32203882 MsG0280008456.01.T01:CDS
GAAACAAACAGACCCTTAGT+AGG 0.479007 2:+32204733 MsG0280008456.01.T01:three_prime_UTR
ATGCAGGGAGTGGTGGAATA+TGG 0.483075 2:+32205834 MsG0280008456.01.T01:three_prime_UTR
AGGCTCAACTTGCACTTCTA+GGG 0.484341 2:-32205941 None:intergenic
AGTGACGATGTTAAAATCTT+GGG 0.484992 2:+32203364 MsG0280008456.01.T01:CDS
ACAAACTAACAATGAATAGC+TGG 0.486862 2:-32205976 None:intergenic
GCTACTATAGTTTGGTTGCA+TGG 0.487776 2:+32206194 MsG0280008456.01.T01:three_prime_UTR
ATGCAGTATTGAGCATTTGT+TGG 0.489553 2:+32206062 MsG0280008456.01.T01:three_prime_UTR
TAGAAGGTTTATACTTAGAA+GGG 0.489956 2:+32201763 MsG0280008456.01.T01:CDS
TTGCAGAAGCTGGAGGAAGT+TGG 0.490194 2:+32203844 MsG0280008456.01.T01:CDS
TCAACTGTGTCAAGTATTAT+GGG 0.495726 2:+32205007 MsG0280008456.01.T01:three_prime_UTR
TTAAGCTCAAAGTTATGCAT+TGG 0.497252 2:+32204970 MsG0280008456.01.T01:three_prime_UTR
AAGAGAATATACACCGGAAA+GGG 0.497920 2:-32203308 None:intergenic
TTAAAACACTGCAGAAAAGT+AGG 0.500855 2:-32204351 None:intergenic
ACAAGCTATGCCAGTATGAC+AGG 0.501229 2:-32206272 None:intergenic
TACTGGCATAGCTTGTGCCT+TGG 0.508482 2:+32206279 MsG0280008456.01.T01:three_prime_UTR
TTAAATTTCATGCTAAGAGA+AGG 0.514991 2:+32205717 MsG0280008456.01.T01:three_prime_UTR
TTCAAATGGGTCATCTATTG+CGG 0.517979 2:-32204793 None:intergenic
CCAAGGGCCGCTCTGCTACA+CGG 0.518175 2:+32205344 MsG0280008456.01.T01:three_prime_UTR
GGAGGAGCACACTAATGATC+AGG 0.518463 2:-32205755 None:intergenic
TCAACACATGATGCAGGGAG+TGG 0.520994 2:+32205824 MsG0280008456.01.T01:three_prime_UTR
GTCATCTATTGCGGGACGGA+GGG 0.523057 2:-32204784 None:intergenic
TCTGCTACTATTGCAGAAGC+TGG 0.525441 2:+32203834 MsG0280008456.01.T01:CDS
TATCTATTATTTAGTCTACA+AGG 0.531082 2:-32204437 None:intergenic
ATGGAACCAGTATAAAATGA+TGG 0.535823 2:-32205612 None:intergenic
TCATATCTCAATGACTTGGA+TGG 0.539115 2:-32203793 None:intergenic
CCAAAACATGGAAACGGTAC+CGG 0.543194 2:-32202695 None:intergenic
GAAAAGCTATTTGAGAGATA+CGG 0.543462 2:-32204588 None:intergenic
CCGTGTAGCAGAGCGGCCCT+TGG 0.546490 2:-32205344 None:intergenic
GGAAATAGATACCTTAGAGA+AGG 0.551779 2:+32201571 MsG0280008456.01.T01:CDS
GGTTTATTGGAAGAGAATGA+AGG 0.552785 2:+32201593 MsG0280008456.01.T01:CDS
GAAATAGATACCTTAGAGAA+GGG 0.553643 2:+32201572 MsG0280008456.01.T01:CDS
AAATCCTAATGCTTTCAAGA+AGG 0.556507 2:+32203393 MsG0280008456.01.T01:CDS
AACAACAATGGAAGAAGTAG+TGG 0.557647 2:+32201550 None:intergenic
TTATGCAGCACTCCAAAACA+TGG 0.560395 2:-32202707 None:intergenic
AAAATTGAATACTTCTCGGA+TGG 0.563300 2:-32203590 None:intergenic
TGCGTGTCATATAGCTGCCA+AGG 0.568089 2:+32205327 MsG0280008456.01.T01:three_prime_UTR
AATAGCAGTCGTCCTACTAA+GGG 0.571071 2:-32204745 None:intergenic
AAATGACTGCAGGAGTGAGA+CGG 0.571659 2:+32205108 MsG0280008456.01.T01:three_prime_UTR
CAGAAGTAAACAAACCCTCA+TGG 0.574735 2:-32205631 None:intergenic
TCTAGCTCAGGTCACAAGGC+CGG 0.575112 2:+32202676 MsG0280008456.01.T01:intron
AGAATCATATCTCAATGACT+TGG 0.577202 2:-32203797 None:intergenic
ACACATGATGCAGGGAGTGG+TGG 0.579590 2:+32205827 MsG0280008456.01.T01:three_prime_UTR
AGAGGAGCAGTTTAGTGTAG+TGG 0.581223 2:-32205302 None:intergenic
GGTCATCTATTGCGGGACGG+AGG 0.581492 2:-32204785 None:intergenic
AGCACTCCAAAACATGGAAA+CGG 0.586314 2:-32202701 None:intergenic
TATATCTAGCTCAGGTCACA+AGG 0.589332 2:+32202672 MsG0280008456.01.T01:intron
TAAGAGAATATACACCGGAA+AGG 0.589665 2:-32203309 None:intergenic
TTGCACGCTATTGACAACAC+TGG 0.595561 2:+32205370 MsG0280008456.01.T01:three_prime_UTR
GCATTCTGTGGCTGATGTCG+TGG 0.596159 2:+32202748 MsG0280008456.01.T01:CDS
GGTCGTATGTATAGAAACAA+AGG 0.599831 2:+32205544 MsG0280008456.01.T01:three_prime_UTR
GTCAAGTATTATGGGACGGA+GGG 0.602555 2:+32205015 MsG0280008456.01.T01:three_prime_UTR
AACCATTATATCTATATCAG+AGG 0.607245 2:+32205864 MsG0280008456.01.T01:three_prime_UTR
ACGACGGAAACTATAGATTG+AGG 0.608280 2:+32204294 MsG0280008456.01.T01:three_prime_UTR
AGCGCAACAATCTCCAACGA+CGG 0.618624 2:+32204278 MsG0280008456.01.T01:three_prime_UTR
TCAAGTACCAAACTGTACAA+TGG 0.623355 2:+32201672 MsG0280008456.01.T01:CDS
GCTGATGTCGTGGTTGAACA+AGG 0.624287 2:+32202758 MsG0280008456.01.T01:CDS
AGCTATATGACACGCACTAG+AGG 0.626884 2:-32205320 None:intergenic
AACAATAGGTAGAGAGACCA+AGG 0.630223 2:-32206296 None:intergenic
CAGTATTGAGCATTTGTTGG+GGG 0.630862 2:+32206065 MsG0280008456.01.T01:three_prime_UTR
GCATGTCTTATTGCATTCTG+TGG 0.631218 2:+32202736 MsG0280008456.01.T01:CDS
ATATGATTCTACTCATTCTG+AGG 0.633241 2:+32203810 MsG0280008456.01.T01:CDS
GCTACTATTGCAGAAGCTGG+AGG 0.634604 2:+32203837 MsG0280008456.01.T01:CDS
CTGTTACTTATACTAGCTTG+GGG 0.636131 2:+32201707 MsG0280008456.01.T01:CDS
AGTGGCCATAACAGATGTCA+CGG 0.640385 2:-32205284 None:intergenic
GCGTGTCATATAGCTGCCAA+GGG 0.642291 2:+32205328 MsG0280008456.01.T01:three_prime_UTR
ATAGCTGGATATATTGCAAG+AGG 0.645765 2:-32205961 None:intergenic
CTGTGTCAAGTATTATGGGA+CGG 0.647165 2:+32205011 MsG0280008456.01.T01:three_prime_UTR
CAAGGACCTATATTTAAGGA+CGG 0.647203 2:-32204419 None:intergenic
TAAAACTCAACAATTAGCTG+TGG 0.647384 2:+32205065 MsG0280008456.01.T01:three_prime_UTR
CGCGATAGCGAAAACTTATG+GGG 0.660800 2:+32204168 MsG0280008456.01.T01:three_prime_UTR
TGTCACGGCTGCTATTAGCA+TGG 0.661720 2:-32205269 None:intergenic
ATGGGTCATCTATTGCGGGA+CGG 0.661743 2:-32204788 None:intergenic
AAGCTATTTGAGAGATACGG+AGG 0.663047 2:-32204585 None:intergenic
CGTATGTATAGAAACAAAGG+TGG 0.669599 2:+32205547 MsG0280008456.01.T01:three_prime_UTR
TGTCAAGTATTATGGGACGG+AGG 0.671463 2:+32205014 MsG0280008456.01.T01:three_prime_UTR
AGCTGTGGTTGACCAGTGAG+AGG 0.677426 2:+32205080 MsG0280008456.01.T01:three_prime_UTR
GCAGTATTGAGCATTTGTTG+GGG 0.680195 2:+32206064 MsG0280008456.01.T01:three_prime_UTR
AATTCTAAGAGAATATACAC+CGG 0.691127 2:-32203314 None:intergenic
ATGACTGCAGGAGTGAGACG+GGG 0.697484 2:+32205110 MsG0280008456.01.T01:three_prime_UTR
GCAATAACCGTGTAGCAGAG+CGG 0.703090 2:-32205351 None:intergenic
GCTGTGGTTGACCAGTGAGA+GGG 0.713495 2:+32205081 MsG0280008456.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTGAAAAAAATAAAAAAA+GGG - Chr2:32202830-32202849 None:intergenic 10.0%
!! CTTAAAAAAAATAAAAATAC+AGG - Chr2:32205786-32205805 None:intergenic 10.0%
!! TACTTGAAAAAAATAAAAAA+AGG - Chr2:32202831-32202850 None:intergenic 10.0%
!! AAAGAAATAATTTATGTACT+TGG + Chr2:32205473-32205492 MsG0280008456.01.T01:three_prime_UTR 15.0%
!! AATACATTAATATGTATAAG+AGG + Chr2:32201991-32202010 MsG0280008456.01.T01:intron 15.0%
!! CATAATTATATAATTACATG+AGG - Chr2:32202909-32202928 None:intergenic 15.0%
!! CTCATGTAATTATATAATTA+TGG + Chr2:32202907-32202926 MsG0280008456.01.T01:intron 15.0%
!! GATATAATTAATCATATACT+AGG - Chr2:32202949-32202968 None:intergenic 15.0%
!! GTATATTATTACTGAATATT+GGG + Chr2:32202308-32202327 MsG0280008456.01.T01:intron 15.0%
!! TATAAATTGAAACAAATAGT+AGG - Chr2:32201858-32201877 None:intergenic 15.0%
!! TGAAATAATTAGAGATAATT+TGG + Chr2:32205449-32205468 MsG0280008456.01.T01:three_prime_UTR 15.0%
!!! ATAAACTATGAATTTGTTAT+TGG + Chr2:32202170-32202189 MsG0280008456.01.T01:intron 15.0%
!!! CATTTGAATTTAACTTTTAA+GGG + Chr2:32205213-32205232 MsG0280008456.01.T01:three_prime_UTR 15.0%
!!! TTAAGGAAAAATTGATTTTA+TGG + Chr2:32206039-32206058 MsG0280008456.01.T01:three_prime_UTR 15.0%
!!! TTTTGTGAAAAAAACATTTT+TGG - Chr2:32204623-32204642 None:intergenic 15.0%
!!! TTTTTTAGTTTTTTTCTGTT+GGG + Chr2:32201879-32201898 MsG0280008456.01.T01:intron 15.0%
!!! TTTTTTTAGTTTTTTTCTGT+TGG + Chr2:32201878-32201897 MsG0280008456.01.T01:intron 15.0%
!! AAAATGATGTCCTATAAAAA+GGG + Chr2:32205501-32205520 MsG0280008456.01.T01:three_prime_UTR 20.0%
!! AAGTAAACGACTTATATTAT+TGG - Chr2:32203652-32203671 None:intergenic 20.0%
!! ACTACAACTTGATTAAAAAA+TGG - Chr2:32204379-32204398 None:intergenic 20.0%
!! ATAATTTATCAAGAAAGTGA+AGG - Chr2:32202100-32202119 None:intergenic 20.0%
!! ATGTATTATATTTGCATGTA+TGG + Chr2:32202621-32202640 MsG0280008456.01.T01:intron 20.0%
!! GGTATATTATTACTGAATAT+TGG + Chr2:32202307-32202326 MsG0280008456.01.T01:intron 20.0%
!! TAAAATGATGTCCTATAAAA+AGG + Chr2:32205500-32205519 MsG0280008456.01.T01:three_prime_UTR 20.0%
!! TAGAAATTAAACTACAAAAC+CGG - Chr2:32203248-32203267 None:intergenic 20.0%
!! TATCTATTATTTAGTCTACA+AGG - Chr2:32204440-32204459 None:intergenic 20.0%
!! TGTATATTAGTAGAAAAATG+CGG - Chr2:32204849-32204868 None:intergenic 20.0%
!! TTAAAACAAACAAAAATGCA+AGG - Chr2:32206023-32206042 None:intergenic 20.0%
!! TTTCTATCGTAATAGTTATT+GGG + Chr2:32205413-32205432 MsG0280008456.01.T01:three_prime_UTR 20.0%
!!! AAAATTGCACATTTTCAAAT+GGG - Chr2:32204809-32204828 None:intergenic 20.0%
!!! AAATTCAAATGCTTTTTACT+AGG - Chr2:32205204-32205223 None:intergenic 20.0%
!!! AATCATTTTAAGTCATTATG+AGG + Chr2:32205244-32205263 MsG0280008456.01.T01:three_prime_UTR 20.0%
!!! AGAAATCATGGTTTTAAATT+AGG - Chr2:32203175-32203194 None:intergenic 20.0%
!!! AGTGACATTAAAACTTTTAA+GGG + Chr2:32202432-32202451 MsG0280008456.01.T01:intron 20.0%
!!! ATGCTATTTACAATAGTTAT+GGG + Chr2:32202976-32202995 MsG0280008456.01.T01:intron 20.0%
!!! CAATTTTTTCCTCTATATTT+TGG + Chr2:32203606-32203625 MsG0280008456.01.T01:intron 20.0%
!!! CTATATTAACATCTTTTACT+AGG - Chr2:32202257-32202276 None:intergenic 20.0%
!!! GAAATCATGGTTTTAAATTA+GGG - Chr2:32203174-32203193 None:intergenic 20.0%
!!! GCATTTGAATTTAACTTTTA+AGG + Chr2:32205212-32205231 MsG0280008456.01.T01:three_prime_UTR 20.0%
!!! TATGCTATTTACAATAGTTA+TGG + Chr2:32202975-32202994 MsG0280008456.01.T01:intron 20.0%
!!! TGAATTTTTGTTGTTGAAAT+TGG + Chr2:32201946-32201965 MsG0280008456.01.T01:intron 20.0%
!!! TTAAAAGTTTTAATGTCACT+CGG - Chr2:32202432-32202451 None:intergenic 20.0%
!!! TTAGTTTCATAAAACGTTTT+AGG - Chr2:32204065-32204084 None:intergenic 20.0%
!!! TTGCATTTTTGTTTGTTTTA+AGG + Chr2:32206022-32206041 MsG0280008456.01.T01:three_prime_UTR 20.0%
!!! TTTTCTATCGTAATAGTTAT+TGG + Chr2:32205412-32205431 MsG0280008456.01.T01:three_prime_UTR 20.0%
! AAAATAAAAATACAGGCAAC+AGG - Chr2:32205779-32205798 None:intergenic 25.0%
! AACCATTATATCTATATCAG+AGG + Chr2:32205864-32205883 MsG0280008456.01.T01:three_prime_UTR 25.0%
! AAGAAAATCACAATTTGATC+AGG - Chr2:32203431-32203450 None:intergenic 25.0%
! AATCAATATCCTTTCTATTG+TGG + Chr2:32203129-32203148 MsG0280008456.01.T01:intron 25.0%
! ACCAAATGCTATTGTTTATA+AGG + Chr2:32201814-32201833 MsG0280008456.01.T01:CDS 25.0%
! ACCTTATAAACAATAGCATT+TGG - Chr2:32201818-32201837 None:intergenic 25.0%
! ATTAATGATACTTGCTCATA+GGG + Chr2:32203275-32203294 MsG0280008456.01.T01:intron 25.0%
! ATTATATAATTACATGAGGC+TGG - Chr2:32202905-32202924 None:intergenic 25.0%
! CTGAAAAAGTAATTCTATGA+TGG - Chr2:32206161-32206180 None:intergenic 25.0%
! GGAAAAAATTGAATACTTCT+CGG - Chr2:32203597-32203616 None:intergenic 25.0%
! GTAGCACTAATAATATTTGT+TGG - Chr2:32205899-32205918 None:intergenic 25.0%
! TAATGAGATACTAGAAATCA+TGG - Chr2:32203187-32203206 None:intergenic 25.0%
! TAGAAGGTTTATACTTAGAA+GGG + Chr2:32201763-32201782 MsG0280008456.01.T01:CDS 25.0%
! TAGTTTCATGCTATAAGATT+TGG + Chr2:32202852-32202871 MsG0280008456.01.T01:intron 25.0%
! TCTCTTAGAATTGAAAATGT+TGG + Chr2:32203325-32203344 MsG0280008456.01.T01:CDS 25.0%
! TGAAATTTAATCTCACATCT+AGG - Chr2:32205707-32205726 None:intergenic 25.0%
! TTAAATTTCATGCTAAGAGA+AGG + Chr2:32205717-32205736 MsG0280008456.01.T01:three_prime_UTR 25.0%
! TTAGAAGGTTTATACTTAGA+AGG + Chr2:32201762-32201781 MsG0280008456.01.T01:CDS 25.0%
! TTCCTCTGATATAGATATAA+TGG - Chr2:32205869-32205888 None:intergenic 25.0%
! TTTACTAGGATTTAAACATG+AGG - Chr2:32202243-32202262 None:intergenic 25.0%
!! AATTCTAAGAGAATATACAC+CGG - Chr2:32203317-32203336 None:intergenic 25.0%
!! AGCAAAAGAATAGATTTTGA+GGG + Chr2:32204531-32204550 MsG0280008456.01.T01:three_prime_UTR 25.0%
!! CAAAATTGCACATTTTCAAA+TGG - Chr2:32204810-32204829 None:intergenic 25.0%
!! GAGTGACATTAAAACTTTTA+AGG + Chr2:32202431-32202450 MsG0280008456.01.T01:intron 25.0%
!! GGATATTGGATATTTTCATT+TGG + Chr2:32204205-32204224 MsG0280008456.01.T01:three_prime_UTR 25.0%
!! TGCTATTTACAATAGTTATG+GGG + Chr2:32202977-32202996 MsG0280008456.01.T01:intron 25.0%
!! TTAACACCATCATTTTATAC+TGG + Chr2:32205606-32205625 MsG0280008456.01.T01:three_prime_UTR 25.0%
!! TTCACTTTAGACATGATTTT+GGG + Chr2:32202562-32202581 MsG0280008456.01.T01:intron 25.0%
!!! ATATTTCTGTCCCTTTTTAT+AGG - Chr2:32205514-32205533 None:intergenic 25.0%
!!! CATCATAGAATTACTTTTTC+AGG + Chr2:32206159-32206178 MsG0280008456.01.T01:three_prime_UTR 25.0%
!!! CATTTTAGTTGTGTTTGTTT+GGG - Chr2:32204662-32204681 None:intergenic 25.0%
!!! GACAGAAATATTTTTGAAGA+GGG + Chr2:32205523-32205542 MsG0280008456.01.T01:three_prime_UTR 25.0%
!!! TAAAAGTTTTAATGTCACTC+GGG - Chr2:32202431-32202450 None:intergenic 25.0%
!!! TCATTTTAGTTGTGTTTGTT+TGG - Chr2:32204663-32204682 None:intergenic 25.0%
!!! TTGTTCTTTTGAAATAGCAA+AGG - Chr2:32206337-32206356 None:intergenic 25.0%
AAAATTGAATACTTCTCGGA+TGG - Chr2:32203593-32203612 None:intergenic 30.0%
AAATCCTAATGCTTTCAAGA+AGG + Chr2:32203393-32203412 MsG0280008456.01.T01:CDS 30.0%
AAGAAATAGTCTTTGTCACT+GGG - Chr2:32202382-32202401 None:intergenic 30.0%
ACAAACTAACAATGAATAGC+TGG - Chr2:32205979-32205998 None:intergenic 30.0%
ACTTACGCCTATATTTCTTT+AGG - Chr2:32206112-32206131 None:intergenic 30.0%
AGAATCATATCTCAATGACT+TGG - Chr2:32203800-32203819 None:intergenic 30.0%
AGAATTGAATAAAAAGAGCG+AGG + Chr2:32204109-32204128 MsG0280008456.01.T01:three_prime_UTR 30.0%
AGTGAACGATGTATCATAAA+AGG - Chr2:32202548-32202567 None:intergenic 30.0%
AGTGACGATGTTAAAATCTT+GGG + Chr2:32203364-32203383 MsG0280008456.01.T01:CDS 30.0%
AGTTATTGGGTATGAAAAAG+AGG + Chr2:32205426-32205445 MsG0280008456.01.T01:three_prime_UTR 30.0%
ATACCTGGTCTATATTCAAA+AGG + Chr2:32202516-32202535 MsG0280008456.01.T01:intron 30.0%
ATATGATTCTACTCATTCTG+AGG + Chr2:32203810-32203829 MsG0280008456.01.T01:CDS 30.0%
ATGGAACCAGTATAAAATGA+TGG - Chr2:32205615-32205634 None:intergenic 30.0%
ATTATATAATTATGGCCCTC+TGG + Chr2:32202915-32202934 MsG0280008456.01.T01:intron 30.0%
CAAAAGAGACCAAAATATAG+AGG - Chr2:32203618-32203637 None:intergenic 30.0%
CATCATCCCTAAAGAAATAT+AGG + Chr2:32206102-32206121 MsG0280008456.01.T01:three_prime_UTR 30.0%
CATTAATTGTACCTGTTCAT+AGG + Chr2:32203202-32203221 MsG0280008456.01.T01:intron 30.0%
CTAAGTATAAACCTTCTAAC+TGG - Chr2:32201761-32201780 None:intergenic 30.0%
CTTACGCCTATATTTCTTTA+GGG - Chr2:32206111-32206130 None:intergenic 30.0%
GAAAAGCTATTTGAGAGATA+CGG - Chr2:32204591-32204610 None:intergenic 30.0%
GAAATAGATACCTTAGAGAA+GGG + Chr2:32201572-32201591 MsG0280008456.01.T01:CDS 30.0%
GATTAATGATACTTGCTCAT+AGG + Chr2:32203274-32203293 MsG0280008456.01.T01:intron 30.0%
TAAAACTCAACAATTAGCTG+TGG + Chr2:32205065-32205084 MsG0280008456.01.T01:three_prime_UTR 30.0%
TATAAGTCGTTTACTTATCC+CGG + Chr2:32203656-32203675 MsG0280008456.01.T01:intron 30.0%
TCAACTGTGTCAAGTATTAT+GGG + Chr2:32205007-32205026 MsG0280008456.01.T01:three_prime_UTR 30.0%
TCTACAAGGACCTATATTTA+AGG - Chr2:32204426-32204445 None:intergenic 30.0%
TCTCATTTCTCATGTTTGAT+AGG - Chr2:32203543-32203562 None:intergenic 30.0%
TGTCTAAATTGTGGTTTCAA+TGG + Chr2:32203095-32203114 MsG0280008456.01.T01:intron 30.0%
TTAAAACACTGCAGAAAAGT+AGG - Chr2:32204354-32204373 None:intergenic 30.0%
TTAAGCTCAAAGTTATGCAT+TGG + Chr2:32204970-32204989 MsG0280008456.01.T01:three_prime_UTR 30.0%
TTACATCCGTCCTTAAATAT+AGG + Chr2:32204413-32204432 MsG0280008456.01.T01:three_prime_UTR 30.0%
TTGAAAATGTTGGAGTTAGA+AGG + Chr2:32203335-32203354 MsG0280008456.01.T01:CDS 30.0%
! AAAGTATCCATTGTACAGTT+TGG - Chr2:32201682-32201701 None:intergenic 30.0%
! AATACATACCACCTTTGTTT+CGG - Chr2:32205558-32205577 None:intergenic 30.0%
! ACTGTTACTTATACTAGCTT+GGG + Chr2:32201706-32201725 MsG0280008456.01.T01:CDS 30.0%
! CAGCAAAAGAATAGATTTTG+AGG + Chr2:32204530-32204549 MsG0280008456.01.T01:three_prime_UTR 30.0%
! GAATGAGTTGAGAAGTTAAA+GGG + Chr2:32202217-32202236 MsG0280008456.01.T01:intron 30.0%
! GTGCTACTATTACTTCATTA+TGG + Chr2:32205912-32205931 MsG0280008456.01.T01:three_prime_UTR 30.0%
! GTGCTATGTTGTAATTTTTG+TGG + Chr2:32206249-32206268 MsG0280008456.01.T01:three_prime_UTR 30.0%
! GTTCACTTTAGACATGATTT+TGG + Chr2:32202561-32202580 MsG0280008456.01.T01:intron 30.0%
! TATCTTGACATAGCTTGTAT+TGG + Chr2:32206227-32206246 MsG0280008456.01.T01:three_prime_UTR 30.0%
! TGAATGAGTTGAGAAGTTAA+AGG + Chr2:32202216-32202235 MsG0280008456.01.T01:intron 30.0%
! TTACCTTTTGAATATAGACC+AGG - Chr2:32202522-32202541 None:intergenic 30.0%
! TTCTGTGTTCTTTAAGCTTT+TGG + Chr2:32202800-32202819 MsG0280008456.01.T01:intron 30.0%
! TTTCATTTTCCTACATGTTG+CGG - Chr2:32203068-32203087 None:intergenic 30.0%
! TTTTCTGTTGGGAATATTAC+TGG + Chr2:32201890-32201909 MsG0280008456.01.T01:intron 30.0%
!! AAACAATAGCATTTGGTGTA+AGG - Chr2:32201811-32201830 None:intergenic 30.0%
!! AAGATTTTAACATCGTCACT+GGG - Chr2:32203364-32203383 None:intergenic 30.0%
!! AATACCTTCTTGAAAGCATT+AGG - Chr2:32203400-32203419 None:intergenic 30.0%
!! ATGAATTTGTTATTGGAGCT+GGG + Chr2:32202177-32202196 MsG0280008456.01.T01:intron 30.0%
!! CTGTCTTGTTTGTAATCAAA+GGG - Chr2:32202341-32202360 None:intergenic 30.0%
!! GGACAGAAATATTTTTGAAG+AGG + Chr2:32205522-32205541 MsG0280008456.01.T01:three_prime_UTR 30.0%
!! TATGAATTTGTTATTGGAGC+TGG + Chr2:32202176-32202195 MsG0280008456.01.T01:intron 30.0%
!! TGTCTTGTTTGTAATCAAAG+GGG - Chr2:32202340-32202359 None:intergenic 30.0%
!!! AAACTTCTTTTTTCTTTGCC+TGG + Chr2:32203492-32203511 MsG0280008456.01.T01:intron 30.0%
!!! ATTTTATACTGGTTCCATGA+GGG + Chr2:32205617-32205636 MsG0280008456.01.T01:three_prime_UTR 30.0%
!!! CATAGAATTACTTTTTCAGG+TGG + Chr2:32206162-32206181 MsG0280008456.01.T01:three_prime_UTR 30.0%
AAACCACAATTTAGACAGCA+AGG - Chr2:32203092-32203111 None:intergenic 35.0%
AAATGCGGTCAAAGTAAGTT+AGG - Chr2:32204834-32204853 None:intergenic 35.0%
AAGAGAATATACACCGGAAA+GGG - Chr2:32203311-32203330 None:intergenic 35.0%
AATAAAAAGAGCGAGGTTCT+AGG + Chr2:32204116-32204135 MsG0280008456.01.T01:three_prime_UTR 35.0%
AGAAAGTAAACGCTGCATAT+AGG + Chr2:32203882-32203901 MsG0280008456.01.T01:CDS 35.0%
AGGCTGGAAGAATAAAAGTA+AGG - Chr2:32202889-32202908 None:intergenic 35.0%
ATAAAAATACAGGCAACAGG+AGG - Chr2:32205776-32205795 None:intergenic 35.0%
ATACTAGGAATTACAACCAG+AGG - Chr2:32202934-32202953 None:intergenic 35.0%
ATAGCTGGATATATTGCAAG+AGG - Chr2:32205964-32205983 None:intergenic 35.0%
ATAGTAACATTTAGCGTTCG+TGG + Chr2:32202273-32202292 MsG0280008456.01.T01:intron 35.0%
ATCAAGAAAGTGAAGGCAAA+CGG - Chr2:32202093-32202112 None:intergenic 35.0%
CAAAACCAATCCTCTTCAAT+AGG - Chr2:32202036-32202055 None:intergenic 35.0%
CAAGGACCTATATTTAAGGA+CGG - Chr2:32204422-32204441 None:intergenic 35.0%
CAGTGACGATGTTAAAATCT+TGG + Chr2:32203363-32203382 MsG0280008456.01.T01:CDS 35.0%
CATTGTTTAAATTGCGACTG+TGG + Chr2:32203013-32203032 MsG0280008456.01.T01:intron 35.0%
GAAGAAATAGTCTTTGTCAC+TGG - Chr2:32202383-32202402 None:intergenic 35.0%
GGAAATAGATACCTTAGAGA+AGG + Chr2:32201571-32201590 MsG0280008456.01.T01:CDS 35.0%
GGTTTATTGGAAGAGAATGA+AGG + Chr2:32201593-32201612 MsG0280008456.01.T01:CDS 35.0%
GTCAACTGTGTCAAGTATTA+TGG + Chr2:32205006-32205025 MsG0280008456.01.T01:three_prime_UTR 35.0%
TAACAGCCTAAAAAGAAACC+AGG - Chr2:32203513-32203532 None:intergenic 35.0%
TAAGAGAATATACACCGGAA+AGG - Chr2:32203312-32203331 None:intergenic 35.0%
TACATGTTGCGGCAATATAA+AGG - Chr2:32203057-32203076 None:intergenic 35.0%
TACCTTAGAGAAGGGTTTAT+TGG + Chr2:32201580-32201599 MsG0280008456.01.T01:CDS 35.0%
TACTAGGAATTACAACCAGA+GGG - Chr2:32202933-32202952 None:intergenic 35.0%
TAGTTGCTGCTACTATAGTT+TGG + Chr2:32206186-32206205 MsG0280008456.01.T01:three_prime_UTR 35.0%
TCAAGTACCAAACTGTACAA+TGG + Chr2:32201672-32201691 MsG0280008456.01.T01:CDS 35.0%
TGCTTTATGTACCAGTTAGA+AGG + Chr2:32201747-32201766 MsG0280008456.01.T01:CDS 35.0%
TGTTGGGAATATTACTGGTA+TGG + Chr2:32201895-32201914 MsG0280008456.01.T01:intron 35.0%
TTAACTGCTGTTGTTCATGT+TGG + Chr2:32203717-32203736 MsG0280008456.01.T01:intron 35.0%
TTCAAATGGGTCATCTATTG+CGG - Chr2:32204796-32204815 None:intergenic 35.0%
TTCCAATAAACCCTTCTCTA+AGG - Chr2:32201585-32201604 None:intergenic 35.0%
TTTATATTGCCGCAACATGT+AGG + Chr2:32203056-32203075 MsG0280008456.01.T01:intron 35.0%
TTTCTATTGTGGCTGCAATT+GGG + Chr2:32203140-32203159 MsG0280008456.01.T01:intron 35.0%
TTTGACAGCATCTTGTCATT+TGG - Chr2:32202405-32202424 None:intergenic 35.0%
! AATCCTTGCTGTCTAAATTG+TGG + Chr2:32203086-32203105 MsG0280008456.01.T01:intron 35.0%
! ACTTTAGACATGATTTTGGG+TGG + Chr2:32202565-32202584 MsG0280008456.01.T01:intron 35.0%
! ATCTGTGTTATATCTAGCTC+AGG + Chr2:32202664-32202683 MsG0280008456.01.T01:intron 35.0%
! ATGCAGTATTGAGCATTTGT+TGG + Chr2:32206062-32206081 MsG0280008456.01.T01:three_prime_UTR 35.0%
! ATGCATTGGCATGCATAATA+AGG + Chr2:32204984-32205003 MsG0280008456.01.T01:three_prime_UTR 35.0%
! CACTGTTACTTATACTAGCT+TGG + Chr2:32201705-32201724 MsG0280008456.01.T01:CDS 35.0%
! CTGTTACTTATACTAGCTTG+GGG + Chr2:32201707-32201726 MsG0280008456.01.T01:CDS 35.0%
! TCATATCTCAATGACTTGGA+TGG - Chr2:32203796-32203815 None:intergenic 35.0%
! TCTTTGCCTGGTTTCTTTTT+AGG + Chr2:32203504-32203523 MsG0280008456.01.T01:intron 35.0%
! TGCAGTATTGAGCATTTGTT+GGG + Chr2:32206063-32206082 MsG0280008456.01.T01:three_prime_UTR 35.0%
! TTATACTAGCTTGGGGAATT+GGG + Chr2:32201714-32201733 MsG0280008456.01.T01:CDS 35.0%
! TTTTCATTTGGCTAAGCATC+AGG + Chr2:32204217-32204236 MsG0280008456.01.T01:three_prime_UTR 35.0%
!! AGTGTCGTTTGTTGTTCATT+AGG + Chr2:32204558-32204577 MsG0280008456.01.T01:three_prime_UTR 35.0%
!! CAAGATTTTAACATCGTCAC+TGG - Chr2:32203365-32203384 None:intergenic 35.0%
!! CTATCTCACTAAAGCGTTTT+TGG - Chr2:32204505-32204524 None:intergenic 35.0%
!! GCTGTCTTGTTTGTAATCAA+AGG - Chr2:32202342-32202361 None:intergenic 35.0%
!!! AAGTCATTGTTGTTTTCTGG+AGG + Chr2:32206128-32206147 MsG0280008456.01.T01:three_prime_UTR 35.0%
!!! AGAGGATTTGTTTTGTCTTC+TGG + Chr2:32202009-32202028 MsG0280008456.01.T01:intron 35.0%
!!! CATTTTATACTGGTTCCATG+AGG + Chr2:32205616-32205635 MsG0280008456.01.T01:three_prime_UTR 35.0%
!!! CGTAAGTCATTGTTGTTTTC+TGG + Chr2:32206125-32206144 MsG0280008456.01.T01:three_prime_UTR 35.0%
!!! GAGGATTTGTTTTGTCTTCT+GGG + Chr2:32202010-32202029 MsG0280008456.01.T01:intron 35.0%
AAATAGCAGTCGTCCTACTA+AGG - Chr2:32204749-32204768 None:intergenic 40.0%
AAATAGTCTTTGTCACTGGG+AGG - Chr2:32202379-32202398 None:intergenic 40.0%
AACAATAGGTAGAGAGACCA+AGG - Chr2:32206299-32206318 None:intergenic 40.0%
AAGCTATTTGAGAGATACGG+AGG - Chr2:32204588-32204607 None:intergenic 40.0%
AATAGCAGTCGTCCTACTAA+GGG - Chr2:32204748-32204767 None:intergenic 40.0%
ACGACGGAAACTATAGATTG+AGG + Chr2:32204294-32204313 MsG0280008456.01.T01:three_prime_UTR 40.0%
ACGCGATAGCGAAAACTTAT+GGG + Chr2:32204167-32204186 MsG0280008456.01.T01:three_prime_UTR 40.0%
AGCACTCCAAAACATGGAAA+CGG - Chr2:32202704-32202723 None:intergenic 40.0%
CAATCTATAGTTTCCGTCGT+TGG - Chr2:32204294-32204313 None:intergenic 40.0%
CAATTGCAGCCACAATAGAA+AGG - Chr2:32203141-32203160 None:intergenic 40.0%
CAGAAGTAAACAAACCCTCA+TGG - Chr2:32205634-32205653 None:intergenic 40.0%
CTGTGTCAAGTATTATGGGA+CGG + Chr2:32205011-32205030 MsG0280008456.01.T01:three_prime_UTR 40.0%
CTTTCTATTGTGGCTGCAAT+TGG + Chr2:32203139-32203158 MsG0280008456.01.T01:intron 40.0%
GAAACAAACAGACCCTTAGT+AGG + Chr2:32204733-32204752 MsG0280008456.01.T01:three_prime_UTR 40.0%
GCTACTATAGTTTGGTTGCA+TGG + Chr2:32206194-32206213 MsG0280008456.01.T01:three_prime_UTR 40.0%
GTGAGTAGTATCCTATGAAC+AGG - Chr2:32203216-32203235 None:intergenic 40.0%
TACTACTCACAAAGTTGCAC+CGG + Chr2:32203226-32203245 MsG0280008456.01.T01:intron 40.0%
TCAAATGGGTCATCTATTGC+GGG - Chr2:32204795-32204814 None:intergenic 40.0%
TCGCTTCTGTAACTGGATAT+TGG + Chr2:32204191-32204210 MsG0280008456.01.T01:three_prime_UTR 40.0%
TGCAGCATCGTTTCAAGAAA+TGG + Chr2:32201637-32201656 MsG0280008456.01.T01:CDS 40.0%
TTAAATTGCGACTGTGGTTG+CGG + Chr2:32203019-32203038 MsG0280008456.01.T01:intron 40.0%
TTATGCAGCACTCCAAAACA+TGG - Chr2:32202710-32202729 None:intergenic 40.0%
TTCTATTGTGGCTGCAATTG+GGG + Chr2:32203141-32203160 MsG0280008456.01.T01:intron 40.0%
! ATTTTTGTGGCCTGTCATAC+TGG + Chr2:32206262-32206281 MsG0280008456.01.T01:three_prime_UTR 40.0%
! CAGTATTGAGCATTTGTTGG+GGG + Chr2:32206065-32206084 MsG0280008456.01.T01:three_prime_UTR 40.0%
! CTTATACTAGCTTGGGGAAT+TGG + Chr2:32201713-32201732 MsG0280008456.01.T01:CDS 40.0%
! GCAGTATTGAGCATTTGTTG+GGG + Chr2:32206064-32206083 MsG0280008456.01.T01:three_prime_UTR 40.0%
! GCATGTCTTATTGCATTCTG+TGG + Chr2:32202736-32202755 MsG0280008456.01.T01:CDS 40.0%
! GCTTTTCAACACATGATGCA+GGG + Chr2:32205819-32205838 MsG0280008456.01.T01:three_prime_UTR 40.0%
! TATATCTAGCTCAGGTCACA+AGG + Chr2:32202672-32202691 MsG0280008456.01.T01:intron 40.0%
! TGCTTTTCAACACATGATGC+AGG + Chr2:32205818-32205837 MsG0280008456.01.T01:three_prime_UTR 40.0%
! TGGTCTCTTTTGCTTCTAAG+TGG + Chr2:32203626-32203645 MsG0280008456.01.T01:intron 40.0%
!! ATTTTAACATCGTCACTGGG+TGG - Chr2:32203361-32203380 None:intergenic 40.0%
!!! CACTAAAGCGTTTTTGGAGT+TGG - Chr2:32204499-32204518 None:intergenic 40.0%
AAATGACTGCAGGAGTGAGA+CGG + Chr2:32205108-32205127 MsG0280008456.01.T01:three_prime_UTR 45.0%
ACAAACAAGACAGCACTTCG+AGG + Chr2:32202348-32202367 MsG0280008456.01.T01:intron 45.0%
ACAAGCTATGCCAGTATGAC+AGG - Chr2:32206275-32206294 None:intergenic 45.0%
ACCCTCAACTTGAGATTTCC+GGG - Chr2:32203677-32203696 None:intergenic 45.0%
AGAGGAGCAGTTTAGTGTAG+TGG - Chr2:32205305-32205324 None:intergenic 45.0%
AGAGGGTGAAAAATGACTGC+AGG + Chr2:32205098-32205117 MsG0280008456.01.T01:three_prime_UTR 45.0%
AGCTATATGACACGCACTAG+AGG - Chr2:32205323-32205342 None:intergenic 45.0%
AGGCTCAACTTGCACTTCTA+GGG - Chr2:32205944-32205963 None:intergenic 45.0%
AGTGGCCATAACAGATGTCA+CGG - Chr2:32205287-32205306 None:intergenic 45.0%
CAAACAAGACAGCACTTCGA+GGG + Chr2:32202349-32202368 MsG0280008456.01.T01:intron 45.0%
CACCCTCAACTTGAGATTTC+CGG - Chr2:32203678-32203697 None:intergenic 45.0%
CCAAAACATGGAAACGGTAC+CGG - Chr2:32202698-32202717 None:intergenic 45.0%
CGCGATAGCGAAAACTTATG+GGG + Chr2:32204168-32204187 MsG0280008456.01.T01:three_prime_UTR 45.0%
GACGCGATAGCGAAAACTTA+TGG + Chr2:32204166-32204185 MsG0280008456.01.T01:three_prime_UTR 45.0%
GGAAGTTGGAAGCTCTGTTA+AGG + Chr2:32203858-32203877 MsG0280008456.01.T01:CDS 45.0%
GTCAAGTATTATGGGACGGA+GGG + Chr2:32205015-32205034 MsG0280008456.01.T01:three_prime_UTR 45.0%
TCTGCTACTATTGCAGAAGC+TGG + Chr2:32203834-32203853 MsG0280008456.01.T01:CDS 45.0%
TGTCAAGTATTATGGGACGG+AGG + Chr2:32205014-32205033 MsG0280008456.01.T01:three_prime_UTR 45.0%
TTGCACGCTATTGACAACAC+TGG + Chr2:32205370-32205389 MsG0280008456.01.T01:three_prime_UTR 45.0%
! AGCATTTGTTGGGGGATAAC+AGG + Chr2:32206073-32206092 MsG0280008456.01.T01:three_prime_UTR 45.0%
! ATCCCGGAAATCTCAAGTTG+AGG + Chr2:32203672-32203691 MsG0280008456.01.T01:intron 45.0%
! GTTGCTCATGTGGTTCTATC+TGG + Chr2:32202461-32202480 MsG0280008456.01.T01:intron 45.0%
!! TCCCGGAAATCTCAAGTTGA+GGG + Chr2:32203673-32203692 MsG0280008456.01.T01:intron 45.0%
!!! AGGGAGTTTTGTTGCTCATG+TGG + Chr2:32202451-32202470 MsG0280008456.01.T01:intron 45.0%
!!! GTCATTTTTCACCCTCTCAC+TGG - Chr2:32205095-32205114 None:intergenic 45.0%
!! AAATTATTTATATTAACAAT+AGG - Chr2:32206313-32206332 None:intergenic 5.0%
AATGACTGCAGGAGTGAGAC+GGG + Chr2:32205109-32205128 MsG0280008456.01.T01:three_prime_UTR 50.0%
AGCAGCCGTGACATCTGTTA+TGG + Chr2:32205279-32205298 MsG0280008456.01.T01:three_prime_UTR 50.0%
AGCGCAACAATCTCCAACGA+CGG + Chr2:32204278-32204297 MsG0280008456.01.T01:three_prime_UTR 50.0%
ATGGGTCATCTATTGCGGGA+CGG - Chr2:32204791-32204810 None:intergenic 50.0%
CTGGGCCTATTGAAGAGGAT+TGG + Chr2:32202028-32202047 MsG0280008456.01.T01:intron 50.0%
GAGGCTCAACTTGCACTTCT+AGG - Chr2:32205945-32205964 None:intergenic 50.0%
GCAATAACCGTGTAGCAGAG+CGG - Chr2:32205354-32205373 None:intergenic 50.0%
GCGTGTCATATAGCTGCCAA+GGG + Chr2:32205328-32205347 MsG0280008456.01.T01:three_prime_UTR 50.0%
GCGTTCGTGGTAGAACAAAC+TGG + Chr2:32202286-32202305 MsG0280008456.01.T01:intron 50.0%
GCTACTATTGCAGAAGCTGG+AGG + Chr2:32203837-32203856 MsG0280008456.01.T01:CDS 50.0%
GCTGATGTCGTGGTTGAACA+AGG + Chr2:32202758-32202777 MsG0280008456.01.T01:CDS 50.0%
GGGTACTTGCAATCCCTTTC+CGG + Chr2:32203295-32203314 MsG0280008456.01.T01:intron 50.0%
GTCTTCTGGGCCTATTGAAG+AGG + Chr2:32202023-32202042 MsG0280008456.01.T01:intron 50.0%
TATGGGGTCGCTTCTGTAAC+TGG + Chr2:32204184-32204203 MsG0280008456.01.T01:three_prime_UTR 50.0%
TCAACACATGATGCAGGGAG+TGG + Chr2:32205824-32205843 MsG0280008456.01.T01:three_prime_UTR 50.0%
TGCGTGTCATATAGCTGCCA+AGG + Chr2:32205327-32205346 MsG0280008456.01.T01:three_prime_UTR 50.0%
TGTCACGGCTGCTATTAGCA+TGG - Chr2:32205272-32205291 None:intergenic 50.0%
TTGCAGAAGCTGGAGGAAGT+TGG + Chr2:32203844-32203863 MsG0280008456.01.T01:CDS 50.0%
TTGTGGTTTCAATGGCGTCG+CGG + Chr2:32203103-32203122 MsG0280008456.01.T01:intron 50.0%
! ATGCAGGGAGTGGTGGAATA+TGG + Chr2:32205834-32205853 MsG0280008456.01.T01:three_prime_UTR 50.0%
! CCGGTACCGTTTCCATGTTT+TGG + Chr2:32202695-32202714 MsG0280008456.01.T01:CDS 50.0%
! GGAGGAGCACACTAATGATC+AGG - Chr2:32205758-32205777 None:intergenic 50.0%
! TACTGGCATAGCTTGTGCCT+TGG + Chr2:32206279-32206298 MsG0280008456.01.T01:three_prime_UTR 50.0%
ACACATGATGCAGGGAGTGG+TGG + Chr2:32205827-32205846 MsG0280008456.01.T01:three_prime_UTR 55.0%
AGCTGTGGTTGACCAGTGAG+AGG + Chr2:32205080-32205099 MsG0280008456.01.T01:three_prime_UTR 55.0%
ATGACTGCAGGAGTGAGACG+GGG + Chr2:32205110-32205129 MsG0280008456.01.T01:three_prime_UTR 55.0%
CAAACGGACAACAAGCTGCG+CGG - Chr2:32202077-32202096 None:intergenic 55.0%
CTAGTTGCGCGCAAGATACC+TGG + Chr2:32202501-32202520 MsG0280008456.01.T01:intron 55.0%
GCATTCTGTGGCTGATGTCG+TGG + Chr2:32202748-32202767 MsG0280008456.01.T01:CDS 55.0%
GCTGTGGTTGACCAGTGAGA+GGG + Chr2:32205081-32205100 MsG0280008456.01.T01:three_prime_UTR 55.0%
GTCATCTATTGCGGGACGGA+GGG - Chr2:32204787-32204806 None:intergenic 55.0%
! TCTAGCTCAGGTCACAAGGC+CGG + Chr2:32202676-32202695 MsG0280008456.01.T01:intron 55.0%
CAGGAGTGAGACGGGGAGAA+AGG + Chr2:32205117-32205136 MsG0280008456.01.T01:three_prime_UTR 60.0%
GCTGCGCGGCTAACACTTTC+TGG - Chr2:32202063-32202082 None:intergenic 60.0%
GGTCATCTATTGCGGGACGG+AGG - Chr2:32204788-32204807 None:intergenic 60.0%
CCAAGGGCCGCTCTGCTACA+CGG + Chr2:32205344-32205363 MsG0280008456.01.T01:three_prime_UTR 65.0%
CCGTGTAGCAGAGCGGCCCT+TGG - Chr2:32205347-32205366 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 32201557 32206394 32201557 ID=MsG0280008456.01;Name=MsG0280008456.01
Chr2 mRNA 32201557 32206394 32201557 ID=MsG0280008456.01.T01;Parent=MsG0280008456.01;Name=MsG0280008456.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|5|2491|227
Chr2 exon 32201557 32201835 32201557 ID=MsG0280008456.01.T01:exon:22564;Parent=MsG0280008456.01.T01
Chr2 exon 32202686 32202779 32202686 ID=MsG0280008456.01.T01:exon:22565;Parent=MsG0280008456.01.T01
Chr2 exon 32203296 32203414 32203296 ID=MsG0280008456.01.T01:exon:22566;Parent=MsG0280008456.01.T01
Chr2 exon 32203526 32203600 32203526 ID=MsG0280008456.01.T01:exon:22567;Parent=MsG0280008456.01.T01
Chr2 exon 32203787 32206394 32203787 ID=MsG0280008456.01.T01:exon:22568;Parent=MsG0280008456.01.T01
Chr2 CDS 32201557 32201835 32201557 ID=MsG0280008456.01.T01:cds;Parent=MsG0280008456.01.T01
Chr2 CDS 32202686 32202779 32202686 ID=MsG0280008456.01.T01:cds;Parent=MsG0280008456.01.T01
Chr2 CDS 32203296 32203414 32203296 ID=MsG0280008456.01.T01:cds;Parent=MsG0280008456.01.T01
Chr2 CDS 32203526 32203600 32203526 ID=MsG0280008456.01.T01:cds;Parent=MsG0280008456.01.T01
Chr2 CDS 32203787 32203903 32203787 ID=MsG0280008456.01.T01:cds;Parent=MsG0280008456.01.T01
Chr2 three_prime_UTR 32203904 32206394 32203904 ID=MsG0280008456.01.T01:three_prime_utr;Parent=MsG0280008456.01.T01
Gene Sequence

>MsG0280008456.01.T01

ATGGAAGAAGTAGTGGAAATAGATACCTTAGAGAAGGGTTTATTGGAAGAGAATGAAGGAAACGAAGAAGAAGTGTTATATGCAGCATCGTTTCAAGAAATGGAGAAGAATTTCATCAAGTACCAAACTGTACAATGGATACTTTACTCACTGTTACTTATACTAGCTTGGGGAATTGGGTTACTCATGTTGCTTTATGTACCAGTTAGAAGGTTTATACTTAGAAGGGATATTCGTTCTAGAAGTCTTTACCTTACACCAAATGCTATTGTTTATAAGGTCACAAGGCCGGTACCGTTTCCATGTTTTGGAGTGCTGCATAAAGAGAAGCATGTCTTATTGCATTCTGTGGCTGATGTCGTGGTTGAACAAGGGTACTTGCAATCCCTTTCCGGTGTATATTCTCTTAGAATTGAAAATGTTGGAGTTAGAAGGCCACCCAGTGACGATGTTAAAATCTTGGGAATTGCAAATCCTAATGCTTTCAAGAAGGCTGTTATGATGCACCTATCAAACATGAGAAATGAGATTGTTTCAAGACATGTGTCTACATTAGCCATCCGAGAAATGTCTCCATCCAAGTCATTGAGATATGATTCTACTCATTCTGAGGATCTGCTACTATTGCAGAAGCTGGAGGAAGTTGGAAGCTCTGTTAAGGTAGAAAGTAAACGCTGCATATAG
Protein sequence

>MsG0280008456.01.T01

MEEVVEIDTLEKGLLEENEGNEEEVLYAASFQEMEKNFIKYQTVQWILYSLLLILAWGIGLLMLLYVPVRRFILRRDIRSRSLYLTPNAIVYKVTRPVPFPCFGVLHKEKHVLLHSVADVVVEQGYLQSLSGVYSLRIENVGVRRPPSDDVKILGIANPNAFKKAVMMHLSNMRNEIVSRHVSTLAIREMSPSKSLRYDSTHSEDLLLLQKLEEVGSSVKVESKRCI*