AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025832.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025832.01.T01 MTR_5g035080 95.405 370 17 0 38 407 64 433 0.0 749
MsG0580025832.01.T01 MTR_5g035150 71.978 364 93 4 41 398 75 435 0.0 538
MsG0580025832.01.T01 MTR_8g104970 64.010 389 136 3 8 395 81 466 0.0 526
MsG0580025832.01.T01 MTR_3g109840 67.507 357 113 3 40 396 64 417 1.32e-180 509
MsG0580025832.01.T01 MTR_5g035090 65.840 363 115 4 40 398 74 431 9.77e-177 500
MsG0580025832.01.T01 MTR_5g035070 66.043 374 118 4 38 407 76 444 2.64e-174 494
MsG0580025832.01.T01 MTR_7g033230 64.426 357 125 2 41 396 256 611 3.35e-172 495
MsG0580025832.01.T01 MTR_7g033230 64.426 357 125 2 41 396 326 681 5.31e-171 494
MsG0580025832.01.T01 MTR_5g035140 68.702 262 80 2 136 396 7 267 1.16e-136 392
MsG0580025832.01.T01 MTR_8g099300 42.458 358 190 8 45 394 70 419 2.66e-96 295
MsG0580025832.01.T01 MTR_6g016880 40.113 354 194 9 49 395 78 420 2.18e-92 285
MsG0580025832.01.T01 MTR_8g027900 40.793 353 194 7 49 394 211 555 1.70e-91 286
MsG0580025832.01.T01 MTR_7g019120 38.136 354 201 9 49 395 79 421 2.30e-84 264
MsG0580025832.01.T01 MTR_6g016875 39.516 372 200 11 35 395 52 409 3.61e-83 261
MsG0580025832.01.T01 MTR_6g007777 37.465 355 204 9 49 396 116 459 3.54e-79 252
MsG0580025832.01.T01 MTR_2g016060 37.119 361 195 13 52 396 58 402 4.38e-75 239
MsG0580025832.01.T01 MTR_1g076690 35.278 360 211 10 49 396 223 572 5.56e-68 226
MsG0580025832.01.T01 MTR_6g061710 34.626 361 212 11 49 396 167 516 1.53e-64 215
MsG0580025832.01.T01 MTR_7g094750 32.976 373 196 17 49 396 91 434 8.54e-52 180
MsG0580025832.01.T01 MTR_0136s0010 33.787 367 200 14 49 396 170 512 4.73e-50 177
MsG0580025832.01.T01 MTR_2g022560 33.058 363 212 10 49 398 97 441 7.80e-50 174
MsG0580025832.01.T01 MTR_7g093450 33.333 378 207 14 49 405 248 601 5.24e-48 172
MsG0580025832.01.T01 MTR_5g035120 66.990 103 34 0 37 139 63 165 9.13e-46 155
MsG0580025832.01.T01 MTR_8g069790 30.390 385 215 14 35 397 166 519 5.70e-45 163
MsG0580025832.01.T01 MTR_8g093530 31.389 360 200 14 49 394 90 416 2.31e-44 159
MsG0580025832.01.T01 MTR_4g016940 30.053 376 221 13 38 394 75 427 4.28e-44 159
MsG0580025832.01.T01 MTR_4g126950 31.680 363 206 13 49 394 109 446 6.21e-44 159
MsG0580025832.01.T01 MTR_1g058380 30.730 397 221 18 25 396 30 397 9.23e-44 157
MsG0580025832.01.T01 MTR_5g059400 30.513 390 213 17 45 405 168 528 1.89e-43 159
MsG0580025832.01.T01 MTR_1g116130 30.513 390 213 17 45 405 168 528 1.89e-43 159
MsG0580025832.01.T01 MTR_5g033800 30.105 382 224 14 32 396 130 485 3.71e-43 157
MsG0580025832.01.T01 MTR_3g464570 31.233 365 209 11 45 394 39 376 1.70e-42 153
MsG0580025832.01.T01 MTR_4g125060 28.883 367 213 10 49 394 132 471 1.29e-41 153
MsG0580025832.01.T01 MTR_4g125060 28.883 367 213 10 49 394 171 510 2.24e-41 153
MsG0580025832.01.T01 MTR_4g125060 28.883 367 213 10 49 394 200 539 2.79e-41 153
MsG0580025832.01.T01 MTR_5g071350 28.767 365 218 10 45 390 54 395 3.09e-41 150
MsG0580025832.01.T01 MTR_7g109550 30.362 359 203 12 49 391 137 464 4.33e-41 151
MsG0580025832.01.T01 MTR_8g463790 29.412 374 211 13 46 396 68 411 1.13e-40 149
MsG0580025832.01.T01 MTR_3g070900 28.809 361 223 13 46 390 103 445 1.85e-39 147
MsG0580025832.01.T01 MTR_8g093870 28.191 376 204 14 49 394 133 472 1.92e-39 147
MsG0580025832.01.T01 MTR_4g121560 29.111 371 215 12 45 394 110 453 1.21e-38 145
MsG0580025832.01.T01 MTR_2g091175 31.549 355 188 15 49 390 50 362 2.08e-38 142
MsG0580025832.01.T01 MTR_3g090120 30.026 383 213 16 35 398 117 463 1.00e-37 142
MsG0580025832.01.T01 MTR_1g050448 28.451 355 213 10 49 394 53 375 1.17e-37 140
MsG0580025832.01.T01 MTR_7g068920 28.906 384 215 17 38 394 69 421 1.19e-37 141
MsG0580025832.01.T01 MTR_3g049330 30.000 350 203 11 49 390 31 346 2.41e-36 136
MsG0580025832.01.T01 MTR_3g021090 30.769 351 197 15 49 390 31 344 2.75e-36 137
MsG0580025832.01.T01 MTR_3g035830 30.337 356 192 15 49 390 31 344 4.10e-36 135
MsG0580025832.01.T01 MTR_3g021060 30.484 351 198 15 49 390 46 359 3.44e-35 133
MsG0580025832.01.T01 MTR_4g014440 29.050 358 222 15 49 390 62 403 8.19e-35 133
MsG0580025832.01.T01 MTR_7g094750 33.984 256 129 10 49 283 91 327 1.33e-34 131
MsG0580025832.01.T01 MTR_4g079700 30.899 356 197 15 49 394 47 363 1.72e-34 131
MsG0580025832.01.T01 MTR_7g070060 28.415 366 214 16 49 390 64 405 1.94e-34 132
MsG0580025832.01.T01 MTR_2g073510 30.028 353 208 14 49 394 33 353 5.41e-33 127
MsG0580025832.01.T01 MTR_5g034810 29.888 358 207 12 41 390 27 348 7.38e-33 127
MsG0580025832.01.T01 MTR_5g083260 27.500 360 229 13 46 391 80 421 5.11e-32 126
MsG0580025832.01.T01 MTR_3g071650 27.446 368 213 16 49 391 89 427 5.61e-32 126
MsG0580025832.01.T01 MTR_6g016240 27.551 392 214 17 37 394 61 416 1.12e-31 125
MsG0580025832.01.T01 MTR_2g073500 28.219 365 201 15 46 394 26 345 2.39e-31 122
MsG0580025832.01.T01 MTR_4g088030 26.761 355 206 11 49 390 33 346 6.77e-31 121
MsG0580025832.01.T01 MTR_2g015720 28.919 370 214 15 35 394 28 358 1.50e-30 120
MsG0580025832.01.T01 MTR_4g087730 28.732 355 215 11 41 390 37 358 2.93e-30 120
MsG0580025832.01.T01 MTR_5g082880 26.503 366 222 13 49 390 165 507 4.68e-30 121
MsG0580025832.01.T01 MTR_4g014430 26.790 377 219 16 43 394 102 446 6.49e-30 120
MsG0580025832.01.T01 MTR_7g019140 50.000 92 46 0 49 140 79 170 5.86e-29 111
MsG0580025832.01.T01 MTR_5g033800 32.683 205 122 5 35 225 132 334 1.60e-28 115
MsG0580025832.01.T01 MTR_1g112210 25.916 382 211 14 32 390 46 378 8.07e-28 113
MsG0580025832.01.T01 MTR_4g092830 26.064 376 217 12 49 394 48 392 1.40e-26 110
MsG0580025832.01.T01 MTR_1g112210 25.594 379 203 14 32 390 46 365 4.16e-26 108
MsG0580025832.01.T01 MTR_7g070060 36.090 133 79 2 49 175 64 196 6.47e-24 101
MsG0580025832.01.T01 MTR_3g464570 28.378 296 170 11 114 394 4 272 2.32e-21 93.6
MsG0580025832.01.T01 MTR_1g111010 44.898 98 52 2 42 137 25 122 2.19e-20 92.0
MsG0580025832.01.T01 MTR_7g117160 34.194 155 67 5 239 393 70 189 8.88e-19 84.0
MsG0580025832.01.T01 MTR_0929s0010 55.102 49 22 0 49 97 79 127 2.03e-13 67.4
MsG0580025832.01.T01 MTR_7g019130 31.818 132 78 6 163 289 1 125 2.15e-12 64.7
MsG0580025832.01.T01 MTR_4g102570 34.109 129 70 4 161 283 2 121 2.92e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025832.01.T01 AT1G70230 51.801 361 151 8 42 397 72 414 4.66e-132 385
MsG0580025832.01.T01 AT4G23790 42.105 361 192 10 44 394 74 427 5.84e-94 289
MsG0580025832.01.T01 AT1G01430 41.620 358 188 10 49 394 99 447 1.14e-93 289
MsG0580025832.01.T01 AT4G01080 42.000 350 185 9 49 392 91 428 1.94e-92 285
MsG0580025832.01.T01 AT4G11090 42.061 359 193 9 44 394 74 425 1.56e-90 280
MsG0580025832.01.T01 AT5G15890 40.503 358 189 10 45 395 183 523 6.99e-89 279
MsG0580025832.01.T01 AT3G02440 38.997 359 201 8 49 400 135 482 1.63e-87 274
MsG0580025832.01.T01 AT3G02440 38.997 359 201 8 49 400 127 474 1.90e-87 273
MsG0580025832.01.T01 AT3G28150 37.465 355 203 9 49 396 70 412 1.39e-82 259
MsG0580025832.01.T01 AT5G15900 37.017 362 207 11 49 401 67 416 2.77e-80 253
MsG0580025832.01.T01 AT5G15900 37.017 362 207 11 49 401 86 435 6.01e-80 253
MsG0580025832.01.T01 AT4G25360 33.880 366 216 9 46 396 172 526 1.19e-63 213
MsG0580025832.01.T01 AT4G25360 33.880 366 216 9 46 396 172 526 1.19e-63 213
MsG0580025832.01.T01 AT5G51640 32.432 407 211 14 32 405 123 498 1.23e-62 210
MsG0580025832.01.T01 AT5G19160 33.243 370 221 10 49 405 99 455 5.08e-55 189
MsG0580025832.01.T01 AT3G06080 30.997 371 207 12 49 396 103 447 1.32e-48 172
MsG0580025832.01.T01 AT5G06700 30.660 424 226 17 2 404 229 605 1.36e-48 174
MsG0580025832.01.T01 AT5G64020 30.831 373 210 12 49 394 57 408 9.20e-48 168
MsG0580025832.01.T01 AT3G11570 31.933 357 197 13 65 402 98 427 1.01e-46 166
MsG0580025832.01.T01 AT3G12060 31.565 377 211 15 49 404 196 546 3.27e-46 167
MsG0580025832.01.T01 AT2G30010 31.421 366 216 13 44 394 51 396 7.74e-46 162
MsG0580025832.01.T01 AT2G30010 31.421 366 216 13 44 394 94 439 1.55e-45 163
MsG0580025832.01.T01 AT1G48880 33.516 364 195 15 44 394 110 439 5.71e-45 161
MsG0580025832.01.T01 AT5G58600 30.252 357 216 10 49 394 66 400 7.01e-43 155
MsG0580025832.01.T01 AT2G14530 30.423 378 198 15 49 394 62 406 1.28e-42 154
MsG0580025832.01.T01 AT5G06230 31.536 371 202 13 49 394 21 364 1.47e-42 153
MsG0580025832.01.T01 AT5G06230 31.536 371 202 13 49 394 62 405 4.19e-42 153
MsG0580025832.01.T01 AT5G20680 28.198 383 207 11 43 394 112 457 4.44e-42 154
MsG0580025832.01.T01 AT3G62390 29.551 379 218 16 36 396 127 474 5.83e-42 154
MsG0580025832.01.T01 AT5G20680 28.084 381 210 10 43 394 188 533 9.64e-42 154
MsG0580025832.01.T01 AT5G20680 28.084 381 210 10 43 394 206 551 1.17e-41 154
MsG0580025832.01.T01 AT5G20680 28.084 381 210 10 43 394 206 551 1.17e-41 154
MsG0580025832.01.T01 AT5G20680 28.084 381 210 10 43 394 206 551 1.17e-41 154
MsG0580025832.01.T01 AT5G20680 28.084 381 210 10 43 394 206 551 1.17e-41 154
MsG0580025832.01.T01 AT5G49340 27.869 366 220 10 49 394 100 441 4.21e-41 151
MsG0580025832.01.T01 AT5G20590 31.044 364 208 14 49 394 141 479 5.92e-41 151
MsG0580025832.01.T01 AT5G01360 28.418 373 236 13 33 391 20 375 7.46e-40 146
MsG0580025832.01.T01 AT2G40160 29.592 392 227 18 26 390 50 419 1.14e-39 147
MsG0580025832.01.T01 AT2G40160 29.592 392 227 18 26 390 50 419 1.22e-39 147
MsG0580025832.01.T01 AT5G01360 28.418 373 236 13 33 391 76 431 2.73e-39 146
MsG0580025832.01.T01 AT2G42570 30.518 367 201 15 41 394 39 364 3.10e-39 144
MsG0580025832.01.T01 AT2G37720 28.982 383 202 11 44 394 138 482 6.30e-39 146
MsG0580025832.01.T01 AT2G40150 29.006 362 221 14 49 390 71 416 1.13e-38 144
MsG0580025832.01.T01 AT1G60790 27.321 377 230 14 40 395 181 534 1.15e-38 146
MsG0580025832.01.T01 AT3G55990 29.178 377 231 16 32 390 121 479 1.42e-38 145
MsG0580025832.01.T01 AT1G73140 28.307 378 221 15 38 394 57 405 1.98e-38 143
MsG0580025832.01.T01 AT5G19160 35.223 247 138 7 49 283 99 335 1.06e-36 137
MsG0580025832.01.T01 AT2G31110 29.972 357 192 16 49 390 45 358 3.73e-36 136
MsG0580025832.01.T01 AT2G30900 28.895 353 206 13 49 390 43 361 4.05e-35 133
MsG0580025832.01.T01 AT2G38320 29.006 362 217 16 49 390 59 400 6.27e-35 134
MsG0580025832.01.T01 AT3G11030 27.717 368 219 15 49 394 106 448 9.23e-35 134
MsG0580025832.01.T01 AT3G14850 30.641 359 198 15 49 394 34 354 6.73e-34 130
MsG0580025832.01.T01 AT2G40320 27.322 366 222 14 46 391 78 419 1.32e-33 130
MsG0580025832.01.T01 AT1G29050 28.184 369 217 15 36 394 48 378 1.68e-33 129
MsG0580025832.01.T01 AT5G64470 27.297 370 217 15 48 394 54 394 2.86e-32 126
MsG0580025832.01.T01 AT1G78710 29.650 371 213 15 34 394 24 356 6.24e-32 124
MsG0580025832.01.T01 AT3G54260 27.374 358 206 13 49 390 51 370 3.06e-31 123
MsG0580025832.01.T01 AT5G64470 26.862 376 217 16 48 394 54 400 3.47e-31 123
MsG0580025832.01.T01 AT3G06080 31.325 249 145 6 49 283 103 339 6.30e-31 121
MsG0580025832.01.T01 AT2G34070 27.298 359 208 15 49 394 65 383 2.22e-30 120
MsG0580025832.01.T01 AT3G62390 29.389 262 155 8 36 283 127 372 1.08e-29 119
MsG0580025832.01.T01 AT2G40160 30.000 240 156 8 49 282 77 310 5.47e-29 115
MsG0580025832.01.T01 AT2G38320 28.834 326 203 14 79 390 7 317 1.60e-28 114
MsG0580025832.01.T01 AT5G01620 26.776 366 230 11 45 394 106 449 2.42e-28 116
MsG0580025832.01.T01 AT5G01620 26.776 366 230 11 45 394 106 449 2.42e-28 116
MsG0580025832.01.T01 AT5G01620 26.776 366 230 11 45 394 114 457 3.17e-28 115
MsG0580025832.01.T01 AT5G58600 32.353 238 143 7 49 282 66 289 1.49e-27 111
MsG0580025832.01.T01 AT5G06230 31.621 253 145 7 49 283 62 304 3.53e-27 110
MsG0580025832.01.T01 AT5G20590 34.715 193 109 6 49 225 141 332 4.92e-27 111
MsG0580025832.01.T01 AT2G30900 36.628 172 92 6 49 213 43 204 6.47e-24 100
MsG0580025832.01.T01 AT2G31110 31.053 190 112 5 39 220 35 213 1.66e-23 99.4
MsG0580025832.01.T01 AT1G78710 36.842 171 101 5 34 200 17 184 1.38e-22 97.4
MsG0580025832.01.T01 AT5G64470 26.389 288 171 12 48 312 54 323 1.00e-19 89.7
MsG0580025832.01.T01 AT5G64470 26.882 279 163 12 48 303 54 314 7.43e-19 87.0

Find 104 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCTTAAAGCCTTTCTTAA+TGG 0.091385 5:-24857003 None:intergenic
TTCCATTAAGAAAGGCTTTA+AGG 0.121836 5:+24857001 MsG0580025832.01.T01:CDS
GCCACCAATGTGAACCTTTA+TGG 0.250930 5:-24856702 None:intergenic
TGCTTAAATTGTTCCGGTTT+CGG 0.254274 5:+24856949 MsG0580025832.01.T01:CDS
CAAACTACCTTTACTATAGA+TGG 0.262429 5:+24856521 MsG0580025832.01.T01:CDS
CCTTTATGGTGGACCGGTTT+AGG 0.263456 5:-24856688 None:intergenic
CACCAACAAATGTGCCATTA+TGG 0.283857 5:-24857570 None:intergenic
GGTCTTAATTACACTGATAT+TGG 0.285156 5:+24856970 MsG0580025832.01.T01:CDS
GTGACTACTTCAATGGAAAA+TGG 0.286087 5:+24856407 MsG0580025832.01.T01:CDS
GGAAAGGGTGAGAAGGAAAT+TGG 0.307402 5:+24857159 MsG0580025832.01.T01:CDS
TACAAAGAAGAGACTCAAAT+TGG 0.314351 5:-24856645 None:intergenic
TCTCTTAAGGATATGATATC+AGG 0.316716 5:+24851971 MsG0580025832.01.T01:CDS
TGTGTTCATTGGTGTTTGCC+TGG 0.324131 5:+24857381 MsG0580025832.01.T01:CDS
CTTGGAAGATTGCACTCATT+TGG 0.324777 5:-24856547 None:intergenic
TCTAGACAAGGAAAATGTTT+GGG 0.327479 5:+24857619 MsG0580025832.01.T01:three_prime_UTR
TTCCATAATGGCACATTTGT+TGG 0.341005 5:+24857568 MsG0580025832.01.T01:three_prime_UTR
TTCTAGACAAGGAAAATGTT+TGG 0.354572 5:+24857618 MsG0580025832.01.T01:three_prime_UTR
GACTTGATTGTGTTATCGTT+TGG 0.361764 5:+24856871 MsG0580025832.01.T01:CDS
AAATGGATTCATGACAATAA+AGG 0.362706 5:+24856424 MsG0580025832.01.T01:CDS
TGTTCAAAGACTGAACCTTA+TGG 0.369816 5:+24857138 MsG0580025832.01.T01:CDS
TTAGGATGCTTAAATTGTTC+CGG 0.372597 5:+24856943 MsG0580025832.01.T01:CDS
TCTCTGATCTTCTTCCATAA+TGG 0.379762 5:+24857556 MsG0580025832.01.T01:three_prime_UTR
AGATGATGAAGAAGTGGGAT+TGG 0.380315 5:+24857436 MsG0580025832.01.T01:CDS
TCATCACCTTGCACAAGAAA+TGG 0.391236 5:-24856766 None:intergenic
CCTAAACCGGTCCACCATAA+AGG 0.397698 5:+24856688 MsG0580025832.01.T01:CDS
AGGGATTAGATTTGAGGTAA+TGG 0.398286 5:+24857257 MsG0580025832.01.T01:CDS
AAATGGAAAGTGAGATTAGA+AGG 0.401729 5:+24857184 MsG0580025832.01.T01:CDS
CCTTCGGTTTATTATGAGAA+TGG 0.405122 5:+24856913 MsG0580025832.01.T01:CDS
AAAGTTTAATATCTACATAT+TGG 0.408158 5:-24857660 None:intergenic
TTGGTTTATTAATGTTCCTT+CGG 0.408464 5:+24856897 MsG0580025832.01.T01:CDS
TGCATGGGTGGTTAAGTTGG+TGG 0.411274 5:+24852039 MsG0580025832.01.T01:CDS
TCCTTCTCACCCTTTCCATA+AGG 0.413581 5:-24857153 None:intergenic
GAAGAAAAGAGTTTCTCTTA+AGG 0.415660 5:+24851958 MsG0580025832.01.T01:CDS
GGTTTATTATGAGAATGGTT+TGG 0.433915 5:+24856918 MsG0580025832.01.T01:CDS
ATATCAGGTATTTGTGTTGA+GGG 0.434581 5:+24851986 MsG0580025832.01.T01:CDS
TAGTAAAGGTAGTTTGAATC+AGG 0.434714 5:-24856514 None:intergenic
TGCAAAATGATTGTGTTCAT+TGG 0.437679 5:+24857370 MsG0580025832.01.T01:CDS
AACTGTTTCAAAACCTAAAC+CGG 0.442193 5:+24856675 MsG0580025832.01.T01:CDS
ATTTGGAGGGATTAGATTTG+AGG 0.443087 5:+24857251 MsG0580025832.01.T01:CDS
AGTGTAATTAAGACCGAAAC+CGG 0.443307 5:-24856962 None:intergenic
TTGTGTTATCGTTTGGCAAT+TGG 0.445306 5:+24856878 MsG0580025832.01.T01:CDS
GTTGCTAAAGGGAATGGAAT+TGG 0.445312 5:+24857054 MsG0580025832.01.T01:CDS
CATCCATGTGACTACTTCAA+TGG 0.447132 5:+24856400 MsG0580025832.01.T01:CDS
ACACCGTTAGCGAACGGAAA+AGG 0.447241 5:-24857336 None:intergenic
AAATGTATTGTATTAAAACT+TGG 0.452232 5:-24856805 None:intergenic
AAGGATTGAGATTGAAGAAG+TGG 0.457929 5:+24857203 MsG0580025832.01.T01:CDS
AATAAAGGTCCTTTATATAG+TGG 0.460409 5:+24856439 MsG0580025832.01.T01:CDS
TAAGCTCCTGGATGACCATC+TGG 0.467024 5:-24857306 None:intergenic
GGTAATGGATGTAACTGAAT+TGG 0.467735 5:+24857272 MsG0580025832.01.T01:CDS
ATGTCTCACTCTTCACTCCT+TGG 0.471169 5:-24857468 None:intergenic
GATGAAGAAGTGGGATTGGA+AGG 0.471664 5:+24857440 MsG0580025832.01.T01:CDS
TTGAGAGGAAAGTTGCTAAA+GGG 0.472700 5:+24857043 MsG0580025832.01.T01:CDS
TTGAGACCAGATGGTCATCC+AGG 0.475196 5:+24857300 MsG0580025832.01.T01:CDS
ATGCAACATTATCCGTGTAT+TGG 0.475380 5:+24856740 MsG0580025832.01.T01:CDS
GGTGATGAAAGATCAAAATC+CGG 0.476546 5:+24856781 MsG0580025832.01.T01:CDS
ATTTGCATGGGTGGTTAAGT+TGG 0.477606 5:+24852036 MsG0580025832.01.T01:CDS
ATCTCATTCCAAGTATCTAT+AGG 0.478611 5:-24857405 None:intergenic
GTGTTCATTGGTGTTTGCCT+GGG 0.480611 5:+24857382 MsG0580025832.01.T01:CDS
CTTAGTTGGAGAAAAGTGTC+AGG 0.481705 5:-24856577 None:intergenic
TGCCTGGGCCTATAGATACT+TGG 0.482132 5:+24857397 MsG0580025832.01.T01:CDS
CATGTTGTTCCACTATATAA+AGG 0.487924 5:-24856448 None:intergenic
ATGGGTGGTTAAGTTGGTGG+AGG 0.491132 5:+24852042 MsG0580025832.01.T01:CDS
ACCATAAAGGTTCACATTGG+TGG 0.496277 5:+24856701 MsG0580025832.01.T01:CDS
TCTAGAGATGATGAAGAAGT+GGG 0.498464 5:+24857431 MsG0580025832.01.T01:CDS
AAAGGATTCATATAAGCTCC+TGG 0.500215 5:-24857318 None:intergenic
TTGGTTTCCATCTATAGTAA+AGG 0.502522 5:-24856528 None:intergenic
TATTGTATTAAAACTTGGCC+CGG 0.503179 5:-24856800 None:intergenic
TGTGAACCTTTATGGTGGAC+CGG 0.509927 5:-24856694 None:intergenic
TTTGGGGTTTGAAAGCAACT+TGG 0.510275 5:+24857636 MsG0580025832.01.T01:three_prime_UTR
TAATAAATTAACAAGCTAAG+AGG 0.510694 5:-24857492 None:intergenic
TTCTAGAGATGATGAAGAAG+TGG 0.512711 5:+24857430 MsG0580025832.01.T01:CDS
AAGACTGAACCTTATGGAAA+GGG 0.515408 5:+24857144 MsG0580025832.01.T01:CDS
CATAATGGCACATTTGTTGG+TGG 0.515551 5:+24857571 MsG0580025832.01.T01:three_prime_UTR
GATATCAGGTATTTGTGTTG+AGG 0.517103 5:+24851985 MsG0580025832.01.T01:CDS
AGGAAAGTTGCTAAAGGGAA+TGG 0.518826 5:+24857048 MsG0580025832.01.T01:CDS
TGGTCGCCATTTCTTGTGCA+AGG 0.526450 5:+24856760 MsG0580025832.01.T01:CDS
ATTGAGAGGAAAGTTGCTAA+AGG 0.529202 5:+24857042 MsG0580025832.01.T01:CDS
AAAGTGTCAGGTTCAAACCT+TGG 0.538655 5:-24856565 None:intergenic
CAAATGAGTGCAATCTTCCA+AGG 0.538693 5:+24856548 MsG0580025832.01.T01:CDS
GGTATTTGTGTTGAGGGAGA+TGG 0.542033 5:+24851992 MsG0580025832.01.T01:CDS
GTGATGAAAGATCAAAATCC+GGG 0.544715 5:+24856782 MsG0580025832.01.T01:CDS
AAAGACTGAACCTTATGGAA+AGG 0.548583 5:+24857143 MsG0580025832.01.T01:CDS
GTTTGAATCAGGTCTTCCAT+TGG 0.554246 5:-24856503 None:intergenic
ATAATGGCACATTTGTTGGT+GGG 0.555933 5:+24857572 MsG0580025832.01.T01:three_prime_UTR
GATGGTGATTGGGATAAGGC+TGG 0.558637 5:+24857111 MsG0580025832.01.T01:CDS
GGACAAAATTGTATCACCAA+TGG 0.563168 5:+24856487 MsG0580025832.01.T01:CDS
TTCCAAGTATCTATAGGCCC+AGG 0.563711 5:-24857399 None:intergenic
TTTGTGTTGAGGGAGATGGT+TGG 0.565246 5:+24851996 MsG0580025832.01.T01:CDS
ACATGTGGAACAATCAAAGA+AGG 0.566099 5:+24856466 MsG0580025832.01.T01:CDS
ATGAAGAAGTGGGATTGGAA+GGG 0.584115 5:+24857441 MsG0580025832.01.T01:CDS
ACCTTATGGAAAGGGTGAGA+AGG 0.593453 5:+24857152 MsG0580025832.01.T01:CDS
TTATATAGTGGAACAACATG+TGG 0.594064 5:+24856451 MsG0580025832.01.T01:CDS
CTAGACAAGGAAAATGTTTG+GGG 0.599938 5:+24857620 MsG0580025832.01.T01:three_prime_UTR
CAATCACCATCAAAATGAGA+AGG 0.607997 5:-24857099 None:intergenic
AAGAAATGGCGACCAATACA+CGG 0.614637 5:-24856752 None:intergenic
TTTCCATTGAAGTAGTCACA+TGG 0.617272 5:-24856403 None:intergenic
TTCGGAACACCGTTAGCGAA+CGG 0.617341 5:-24857342 None:intergenic
GTCTTAATAGCATAATTGAG+AGG 0.633582 5:+24857028 MsG0580025832.01.T01:CDS
TTGGCATTGTTGAGACCAGA+TGG 0.642859 5:+24857291 MsG0580025832.01.T01:CDS
GGGATTGGAAGGGACAGCCA+AGG 0.651431 5:+24857451 MsG0580025832.01.T01:CDS
CCATTCTCATAATAAACCGA+AGG 0.655142 5:-24856913 None:intergenic
ACCAATGTGAACCTTTATGG+TGG 0.671348 5:-24856699 None:intergenic
TCCACCATAAAGGTTCACAT+TGG 0.672090 5:+24856698 MsG0580025832.01.T01:CDS
AAATTGGCGAAGGATATGGA+TGG 0.672881 5:+24856844 MsG0580025832.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATTAATTTAATTATT+TGG + Chr5:24852812-24852831 MsG0580025832.01.T01:intron 0.0%
!! AAAATCAAAATACAAATATT+TGG - Chr5:24854329-24854348 None:intergenic 10.0%
!! ATAAAAAAAAAAGTTAAGAT+TGG - Chr5:24854777-24854796 None:intergenic 10.0%
!! ATGATATGAAAATTTATATT+TGG + Chr5:24855041-24855060 MsG0580025832.01.T01:intron 10.0%
!! TTTAAATAAATCTAATCAAA+GGG - Chr5:24856291-24856310 None:intergenic 10.0%
!!! AAAGATAATTTATTTTGAAA+AGG + Chr5:24852291-24852310 MsG0580025832.01.T01:intron 10.0%
!!! AAATAAAGTTTAGATTTTAT+GGG + Chr5:24853716-24853735 MsG0580025832.01.T01:intron 10.0%
!!! AAATATAAATTTTCATATCA+TGG - Chr5:24855042-24855061 None:intergenic 10.0%
!!! AAATCAGTTTTTAATTTTTA+TGG - Chr5:24857720-24857739 None:intergenic 10.0%
!!! AAGATAATTTATTTTGAAAA+GGG + Chr5:24852292-24852311 MsG0580025832.01.T01:intron 10.0%
!!! CAAATTAGTAAATATTTTTT+TGG + Chr5:24855811-24855830 MsG0580025832.01.T01:intron 10.0%
!!! TAATAAACATAATCTTTTTA+TGG - Chr5:24857529-24857548 None:intergenic 10.0%
!!! TTTTCAAAATAAATTATCTT+TGG - Chr5:24852292-24852311 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTTATCAT+AGG - Chr5:24853420-24853439 None:intergenic 10.0%
!! AAAAAAATCGAATATTTCAA+TGG + Chr5:24853433-24853452 MsG0580025832.01.T01:intron 15.0%
!! AAAACAAATATAGAAAACAA+TGG - Chr5:24854380-24854399 None:intergenic 15.0%
!! AAAGAATAAAGTACAATATA+TGG - Chr5:24855117-24855136 None:intergenic 15.0%
!! AAAGTTTAATATCTACATAT+TGG - Chr5:24857663-24857682 None:intergenic 15.0%
!! AAATGTATTGTATTAAAACT+TGG - Chr5:24856808-24856827 None:intergenic 15.0%
!! AAGAAAAAACATAATTTCAT+TGG + Chr5:24852605-24852624 MsG0580025832.01.T01:intron 15.0%
!! AAGTAAATAGTTATTTATCA+AGG + Chr5:24852555-24852574 MsG0580025832.01.T01:intron 15.0%
!! AGTAACTTAAGAAAAATTAT+TGG - Chr5:24854487-24854506 None:intergenic 15.0%
!! ATAGAAAAAAAATAAAGTGT+AGG - Chr5:24853250-24853269 None:intergenic 15.0%
!! GTTTAAATAAATCTAATCAA+AGG - Chr5:24856292-24856311 None:intergenic 15.0%
!! TATAAATAAAGAAGAACAAT+GGG - Chr5:24855465-24855484 None:intergenic 15.0%
!! TCTAATTTATGATTTAATTG+AGG - Chr5:24854965-24854984 None:intergenic 15.0%
!! TGAAATAAAATTTAAACTAG+AGG - Chr5:24855072-24855091 None:intergenic 15.0%
!! TTAAATAAATCTAATCAAAG+GGG - Chr5:24856290-24856309 None:intergenic 15.0%
!!! AAACATTTTCAATGAAATAT+TGG - Chr5:24853853-24853872 None:intergenic 15.0%
!!! AAGTTTTAATACAATACATT+TGG + Chr5:24856807-24856826 MsG0580025832.01.T01:CDS 15.0%
!!! GAAATAAAGTTTAGATTTTA+TGG + Chr5:24853715-24853734 MsG0580025832.01.T01:intron 15.0%
!!! TAAAATTTTTAGTTTGATCA+TGG + Chr5:24854247-24854266 MsG0580025832.01.T01:intron 15.0%
!!! TTTAAAGCATTGTAATTTTA+TGG + Chr5:24854179-24854198 MsG0580025832.01.T01:intron 15.0%
!!! TTTTTGTTTTGTTTTATCAT+AGG - Chr5:24853538-24853557 None:intergenic 15.0%
!! AAGAAAGAAACAATCAATAA+TGG - Chr5:24854618-24854637 None:intergenic 20.0%
!! AATATATCTTTCGATAAATC+TGG - Chr5:24856004-24856023 None:intergenic 20.0%
!! AATTGAATTTGAAGAAAGAT+TGG - Chr5:24853495-24853514 None:intergenic 20.0%
!! ACAAAAATCGAATATTTCAA+TGG + Chr5:24853551-24853570 MsG0580025832.01.T01:intron 20.0%
!! ATTAAGTGAAGATTGTTTAA+TGG + Chr5:24853904-24853923 MsG0580025832.01.T01:intron 20.0%
!! CCAACAAAAAATTATTTCAA+TGG + Chr5:24853664-24853683 MsG0580025832.01.T01:intron 20.0%
!! GAGAAAAAATTTATTTGCAT+GGG + Chr5:24852024-24852043 MsG0580025832.01.T01:CDS 20.0%
!! GTATAAATAAAGAAGAACAA+TGG - Chr5:24855466-24855485 None:intergenic 20.0%
!! TAATAAATTAACAAGCTAAG+AGG - Chr5:24857495-24857514 None:intergenic 20.0%
!! TAATGACACATAAATGTTAT+GGG + Chr5:24852452-24852471 MsG0580025832.01.T01:intron 20.0%
!! TAATTAAATGAGGTAATCAT+TGG + Chr5:24855785-24855804 MsG0580025832.01.T01:intron 20.0%
!! TCAAAATAAATTATCTTTGG+TGG - Chr5:24852289-24852308 None:intergenic 20.0%
!! TTTATAGAGGAAAAATGATT+AGG + Chr5:24855661-24855680 MsG0580025832.01.T01:intron 20.0%
!!! AATTTAATTATTTGGTGTAC+CGG + Chr5:24852820-24852839 MsG0580025832.01.T01:intron 20.0%
!!! CCATTGAAATAATTTTTTGT+TGG - Chr5:24853667-24853686 None:intergenic 20.0%
!!! TTAAAAGTGTAAAGAGTTTT+CGG - Chr5:24856197-24856216 None:intergenic 20.0%
!!! TTTAGGTAGATATTTCATTT+TGG + Chr5:24852409-24852428 MsG0580025832.01.T01:intron 20.0%
!!! TTTTAACTCATTTTGTCTAT+CGG + Chr5:24856037-24856056 MsG0580025832.01.T01:intron 20.0%
!!! TTTTTACCATTAGATTAAAG+AGG + Chr5:24853201-24853220 MsG0580025832.01.T01:intron 20.0%
!!! TTTTTATGTTCCATTAAGAA+AGG + Chr5:24856993-24857012 MsG0580025832.01.T01:CDS 20.0%
!!! TTTTTTTGTTTTATCATAGG+TGG - Chr5:24853417-24853436 None:intergenic 20.0%
! AAAAAATTTATTTGCATGGG+TGG + Chr5:24852027-24852046 MsG0580025832.01.T01:CDS 25.0%
! AAAAAGAAGAGAATAGAAAG+TGG - Chr5:24853781-24853800 None:intergenic 25.0%
! AAAACAAAGGAAAAACTCAT+TGG - Chr5:24854541-24854560 None:intergenic 25.0%
! AAACAATCAATAATGGTGTA+GGG - Chr5:24854611-24854630 None:intergenic 25.0%
! AAAGAGAAATCCATGAATTA+AGG - Chr5:24854718-24854737 None:intergenic 25.0%
! AAGAAAAAAGCAAATGCATT+TGG + Chr5:24857234-24857253 MsG0580025832.01.T01:CDS 25.0%
! AATAAAGGTCCTTTATATAG+TGG + Chr5:24856439-24856458 MsG0580025832.01.T01:CDS 25.0%
! AATACACCTCTTTAATCTAA+TGG - Chr5:24853210-24853229 None:intergenic 25.0%
! AGATTGTATATCAACTCATA+AGG - Chr5:24852164-24852183 None:intergenic 25.0%
! AGTAAAAGATGAAGTGTATA+TGG - Chr5:24855426-24855445 None:intergenic 25.0%
! ATAACATTTGGCAAATTCTA+TGG - Chr5:24853079-24853098 None:intergenic 25.0%
! ATTCACACTTGAAAATGATT+AGG + Chr5:24855633-24855652 MsG0580025832.01.T01:intron 25.0%
! CGAGAAAAAATTTATTTGCA+TGG + Chr5:24852023-24852042 MsG0580025832.01.T01:CDS 25.0%
! GAACTGAACAATAAAATAGT+GGG + Chr5:24855688-24855707 MsG0580025832.01.T01:intron 25.0%
! GATAAATTATCGATCATTCT+AGG + Chr5:24852532-24852551 MsG0580025832.01.T01:intron 25.0%
! GTAATGACACATAAATGTTA+TGG + Chr5:24852451-24852470 MsG0580025832.01.T01:intron 25.0%
! TACAATTAAATCAGATGCAA+TGG + Chr5:24853307-24853326 MsG0580025832.01.T01:intron 25.0%
! TATCGAAAGATATATTTCGA+TGG + Chr5:24856008-24856027 MsG0580025832.01.T01:intron 25.0%
! TGAACTGAACAATAAAATAG+TGG + Chr5:24855687-24855706 MsG0580025832.01.T01:intron 25.0%
! TTCAAATGACCTTAAACAAA+GGG - Chr5:24852203-24852222 None:intergenic 25.0%
! TTCAACTACTCTAATTAACA+TGG - Chr5:24855729-24855748 None:intergenic 25.0%
! TTGAAGGATGAAATTAAACA+TGG + Chr5:24853933-24853952 MsG0580025832.01.T01:intron 25.0%
! TTGGTTTATTAATGTTCCTT+CGG + Chr5:24856897-24856916 MsG0580025832.01.T01:CDS 25.0%
! TTTAATGAGTGTGTCTTATA+AGG + Chr5:24856212-24856231 MsG0580025832.01.T01:intron 25.0%
! TTTACAAATCACCACAATTA+AGG + Chr5:24855901-24855920 MsG0580025832.01.T01:intron 25.0%
! TTTCAAATGACCTTAAACAA+AGG - Chr5:24852204-24852223 None:intergenic 25.0%
!! AAATGGATTCATGACAATAA+AGG + Chr5:24856424-24856443 MsG0580025832.01.T01:CDS 25.0%
!! AACAAACACATATCTTTTGT+TGG + Chr5:24856604-24856623 MsG0580025832.01.T01:CDS 25.0%
!! AATTTATTAAGCAAGAGTAC+CGG - Chr5:24852512-24852531 None:intergenic 25.0%
!! ATATGTTGACAGTTCAATTT+TGG - Chr5:24853346-24853365 None:intergenic 25.0%
!! ATCGACTTCTAGAAAAATTT+AGG + Chr5:24852392-24852411 MsG0580025832.01.T01:intron 25.0%
!! CAAAATGAAAAGTACATCAA+AGG + Chr5:24855368-24855387 MsG0580025832.01.T01:intron 25.0%
!! TAAGGTCATTTGAAACAATT+TGG + Chr5:24852209-24852228 MsG0580025832.01.T01:intron 25.0%
!! TTAGATTTTATGGGTTTTAC+TGG + Chr5:24853725-24853744 MsG0580025832.01.T01:intron 25.0%
!!! ATTGGTTTGAATACTTTAAG+TGG - Chr5:24854523-24854542 None:intergenic 25.0%
!!! CACAAATTTCTTGATGATTT+TGG - Chr5:24854877-24854896 None:intergenic 25.0%
!!! GTAGATATTTCATTTTGGTT+AGG + Chr5:24852414-24852433 MsG0580025832.01.T01:intron 25.0%
!!! TGATTAGGTGTTTTTTATAG+AGG + Chr5:24855648-24855667 MsG0580025832.01.T01:intron 25.0%
!!! TTGTATATCAGAGGTTTTAA+AGG - Chr5:24856244-24856263 None:intergenic 25.0%
!!! TTGTTTTGTTTTATCATAGG+TGG - Chr5:24853535-24853554 None:intergenic 25.0%
!!! TTTACTTCACGCAAATTTTT+TGG + Chr5:24855247-24855266 MsG0580025832.01.T01:intron 25.0%
AAAAAAGCAAATGCATTTGG+AGG + Chr5:24857237-24857256 MsG0580025832.01.T01:CDS 30.0%
AAAAAGCAAATGCATTTGGA+GGG + Chr5:24857238-24857257 MsG0580025832.01.T01:CDS 30.0%
AAACCTCTGATATACAATCA+TGG + Chr5:24856247-24856266 MsG0580025832.01.T01:intron 30.0%
AAATGGAAAGTGAGATTAGA+AGG + Chr5:24857184-24857203 MsG0580025832.01.T01:CDS 30.0%
AAATGTTATGGGAACTTCTA+CGG + Chr5:24852463-24852482 MsG0580025832.01.T01:intron 30.0%
AACCATCTACAAAATTGTCA+CGG + Chr5:24856119-24856138 MsG0580025832.01.T01:intron 30.0%
AACCTCTGATATACAATCAT+GGG + Chr5:24856248-24856267 MsG0580025832.01.T01:intron 30.0%
AACTGCATGACAATAACATT+CGG - Chr5:24852880-24852899 None:intergenic 30.0%
AACTGCATGACAATAACATT+TGG - Chr5:24852880-24852899 None:intergenic 30.0%
AACTGTTTCAAAACCTAAAC+CGG + Chr5:24856675-24856694 MsG0580025832.01.T01:CDS 30.0%
AAGGATGAAATTAAACATGG+TGG + Chr5:24853936-24853955 MsG0580025832.01.T01:intron 30.0%
ATAACATTCGGCAAATTCTA+TGG - Chr5:24852868-24852887 None:intergenic 30.0%
ATATCAGGTATTTGTGTTGA+GGG + Chr5:24851986-24852005 MsG0580025832.01.T01:CDS 30.0%
ATCTCATTCCAAGTATCTAT+AGG - Chr5:24857408-24857427 None:intergenic 30.0%
ATGAAGTGTATATGGAAGAA+GGG - Chr5:24855418-24855437 None:intergenic 30.0%
ATTAACATACCTGCATAATG+TGG - Chr5:24855552-24855571 None:intergenic 30.0%
ATTGTCTAACATTTCGTTAC+AGG + Chr5:24852078-24852097 MsG0580025832.01.T01:intron 30.0%
ATTTAATTGAGGAAACTCAC+CGG - Chr5:24854954-24854973 None:intergenic 30.0%
CAAACTACCTTTACTATAGA+TGG + Chr5:24856521-24856540 MsG0580025832.01.T01:CDS 30.0%
CAACATATGCTTTATGTACA+TGG + Chr5:24853358-24853377 MsG0580025832.01.T01:intron 30.0%
CAATGAAACTAATTGAGTGT+TGG - Chr5:24853386-24853405 None:intergenic 30.0%
CATGTTGTTCCACTATATAA+AGG - Chr5:24856451-24856470 None:intergenic 30.0%
CATTTCGTTACAGGATAATA+TGG + Chr5:24852087-24852106 MsG0580025832.01.T01:intron 30.0%
GAAACAATCAATAATGGTGT+AGG - Chr5:24854612-24854631 None:intergenic 30.0%
GAAGAAAAGAGTTTCTCTTA+AGG + Chr5:24851958-24851977 MsG0580025832.01.T01:CDS 30.0%
GAATTTGAAGAAAGATTGGT+GGG - Chr5:24853491-24853510 None:intergenic 30.0%
GACTGCTTCTTTAACAAAAA+TGG - Chr5:24854300-24854319 None:intergenic 30.0%
GATGTTAGCAAGTTTAACAA+AGG - Chr5:24854743-24854762 None:intergenic 30.0%
GGTCTTAATTACACTGATAT+TGG + Chr5:24856970-24856989 MsG0580025832.01.T01:CDS 30.0%
GGTTTATTATGAGAATGGTT+TGG + Chr5:24856918-24856937 MsG0580025832.01.T01:CDS 30.0%
GTAAAAATTCAACTTTCCCA+TGG + Chr5:24854071-24854090 MsG0580025832.01.T01:intron 30.0%
GTCTTAATAGCATAATTGAG+AGG + Chr5:24857028-24857047 MsG0580025832.01.T01:CDS 30.0%
TACAAAGAAGAGACTCAAAT+TGG - Chr5:24856648-24856667 None:intergenic 30.0%
TAGTAAAGGTAGTTTGAATC+AGG - Chr5:24856517-24856536 None:intergenic 30.0%
TATCGGAATATATGTTTCGA+TGG + Chr5:24856054-24856073 MsG0580025832.01.T01:intron 30.0%
TATTGTATTAAAACTTGGCC+CGG - Chr5:24856803-24856822 None:intergenic 30.0%
TCAAATGACCTTAAACAAAG+GGG - Chr5:24852202-24852221 None:intergenic 30.0%
TCTAGACAAGGAAAATGTTT+GGG + Chr5:24857619-24857638 MsG0580025832.01.T01:three_prime_UTR 30.0%
TCTCTTAAGGATATGATATC+AGG + Chr5:24851971-24851990 MsG0580025832.01.T01:CDS 30.0%
TCTCTTGTATCCTTAATTCA+TGG + Chr5:24854705-24854724 MsG0580025832.01.T01:intron 30.0%
TGAAGATTGTTTAATGGCAA+AGG + Chr5:24853910-24853929 MsG0580025832.01.T01:intron 30.0%
TGAATTAAGGATACAAGAGA+TGG - Chr5:24854705-24854724 None:intergenic 30.0%
TGAATTTGAAGAAAGATTGG+TGG - Chr5:24853492-24853511 None:intergenic 30.0%
TGAGAAGGAAATTGGAAAAA+TGG + Chr5:24857167-24857186 MsG0580025832.01.T01:CDS 30.0%
TGCAAAATGATTGTGTTCAT+TGG + Chr5:24857370-24857389 MsG0580025832.01.T01:CDS 30.0%
TGCACACTTATCTATATTTG+AGG - Chr5:24855158-24855177 None:intergenic 30.0%
TGGTAGAAGAAAGAAAACAA+AGG - Chr5:24854554-24854573 None:intergenic 30.0%
TTAAACACTTATAGTGAGAC+AGG + Chr5:24855868-24855887 MsG0580025832.01.T01:intron 30.0%
TTAGGATGCTTAAATTGTTC+CGG + Chr5:24856943-24856962 MsG0580025832.01.T01:CDS 30.0%
TTCCATTAAGAAAGGCTTTA+AGG + Chr5:24857001-24857020 MsG0580025832.01.T01:CDS 30.0%
TTCGTAACAAAAGAAAGTGA+AGG + Chr5:24852913-24852932 MsG0580025832.01.T01:intron 30.0%
TTCTACCAAAAAAACCAATG+AGG + Chr5:24854566-24854585 MsG0580025832.01.T01:intron 30.0%
TTCTAGACAAGGAAAATGTT+TGG + Chr5:24857618-24857637 MsG0580025832.01.T01:three_prime_UTR 30.0%
TTGGTTTCCATCTATAGTAA+AGG - Chr5:24856531-24856550 None:intergenic 30.0%
TTGTAAAATTCCAGATCTAG+AGG - Chr5:24853292-24853311 None:intergenic 30.0%
! CAATCATTTTGCACATACTT+CGG - Chr5:24857363-24857382 None:intergenic 30.0%
! GAGATTTTGTAAGAGACAAA+GGG - Chr5:24855494-24855513 None:intergenic 30.0%
! GTACATGAAATCTTTAGCTT+TGG - Chr5:24854278-24854297 None:intergenic 30.0%
! TGAGATTTTGTAAGAGACAA+AGG - Chr5:24855495-24855514 None:intergenic 30.0%
! TTATATAGTGGAACAACATG+TGG + Chr5:24856451-24856470 MsG0580025832.01.T01:CDS 30.0%
! TTTTATGGTGTTCGTTAATC+AGG + Chr5:24854194-24854213 MsG0580025832.01.T01:intron 30.0%
! TTTTCACCTTCTCATTTTGA+TGG + Chr5:24857093-24857112 MsG0580025832.01.T01:CDS 30.0%
! TTTTCTTTCCAGAAGAACAA+TGG + Chr5:24853825-24853844 MsG0580025832.01.T01:intron 30.0%
!! ATTTTGGAGAAAAGGAGTTT+TGG - Chr5:24854861-24854880 None:intergenic 30.0%
!! TCTTGATGATTTTGGAGAAA+AGG - Chr5:24854869-24854888 None:intergenic 30.0%
!! TCTTTTGTGATTGTTCTAAG+TGG - Chr5:24855297-24855316 None:intergenic 30.0%
!!! TATGAGAATGGTTTGGTTTT+AGG + Chr5:24856925-24856944 MsG0580025832.01.T01:CDS 30.0%
!!! TGTGTTTGTTTTTGCTTAGT+TGG - Chr5:24856594-24856613 None:intergenic 30.0%
!!! TTCTCATTTTGATGGTGATT+GGG + Chr5:24857101-24857120 MsG0580025832.01.T01:CDS 30.0%
!!! TTGGTTTTAGTTTCTAGACA+AGG + Chr5:24857607-24857626 MsG0580025832.01.T01:three_prime_UTR 30.0%
AAAATTCAACTTTCCCATGG+TGG + Chr5:24854074-24854093 MsG0580025832.01.T01:intron 35.0%
AAAGACTGAACCTTATGGAA+AGG + Chr5:24857143-24857162 MsG0580025832.01.T01:CDS 35.0%
AAAGGATTCATATAAGCTCC+TGG - Chr5:24857321-24857340 None:intergenic 35.0%
AAATTCAACTTTCCCATGGT+GGG + Chr5:24854075-24854094 MsG0580025832.01.T01:intron 35.0%
AAGACTGAACCTTATGGAAA+GGG + Chr5:24857144-24857163 MsG0580025832.01.T01:CDS 35.0%
AAGGATTGAGATTGAAGAAG+TGG + Chr5:24857203-24857222 MsG0580025832.01.T01:CDS 35.0%
ACATGTGGAACAATCAAAGA+AGG + Chr5:24856466-24856485 MsG0580025832.01.T01:CDS 35.0%
ACCCAAATATTTGAGTGTAC+CGG - Chr5:24852842-24852861 None:intergenic 35.0%
ACCGGTACACTCAAATATTT+GGG + Chr5:24852838-24852857 MsG0580025832.01.T01:intron 35.0%
AGCAGAAAACAAAGTAGGAA+AGG + Chr5:24855326-24855345 MsG0580025832.01.T01:intron 35.0%
AGCATATATGTGAGGTAATG+AGG - Chr5:24854676-24854695 None:intergenic 35.0%
AGTGTAATTAAGACCGAAAC+CGG - Chr5:24856965-24856984 None:intergenic 35.0%
ATCTTTGGTGGAAAGATAGA+TGG - Chr5:24852277-24852296 None:intergenic 35.0%
ATGCAACATTATCCGTGTAT+TGG + Chr5:24856740-24856759 MsG0580025832.01.T01:CDS 35.0%
ATTGAGAGGAAAGTTGCTAA+AGG + Chr5:24857042-24857061 MsG0580025832.01.T01:CDS 35.0%
ATTTGGAGGGATTAGATTTG+AGG + Chr5:24857251-24857270 MsG0580025832.01.T01:CDS 35.0%
CAATCACCATCAAAATGAGA+AGG - Chr5:24857102-24857121 None:intergenic 35.0%
CATATATGTGAGGTAATGAG+GGG - Chr5:24854674-24854693 None:intergenic 35.0%
CCATTCTCATAATAAACCGA+AGG - Chr5:24856916-24856935 None:intergenic 35.0%
CCTTCGGTTTATTATGAGAA+TGG + Chr5:24856913-24856932 MsG0580025832.01.T01:CDS 35.0%
CTAGACAAGGAAAATGTTTG+GGG + Chr5:24857620-24857639 MsG0580025832.01.T01:three_prime_UTR 35.0%
CTATGAGCAGAAAACAAAGT+AGG + Chr5:24855321-24855340 MsG0580025832.01.T01:intron 35.0%
GACTTGATTGTGTTATCGTT+TGG + Chr5:24856871-24856890 MsG0580025832.01.T01:CDS 35.0%
GAGTAGTTGAAAGTAGTAGT+TGG + Chr5:24855738-24855757 MsG0580025832.01.T01:intron 35.0%
GATATCAGGTATTTGTGTTG+AGG + Chr5:24851985-24852004 MsG0580025832.01.T01:CDS 35.0%
GATGAAATTAAACATGGTGG+TGG + Chr5:24853939-24853958 MsG0580025832.01.T01:intron 35.0%
GATGAAGTGTATATGGAAGA+AGG - Chr5:24855419-24855438 None:intergenic 35.0%
GCAATCTAATGACATGCATT+TGG + Chr5:24852948-24852967 MsG0580025832.01.T01:intron 35.0%
GCATATATGTGAGGTAATGA+GGG - Chr5:24854675-24854694 None:intergenic 35.0%
GGACAAAATTGTATCACCAA+TGG + Chr5:24856487-24856506 MsG0580025832.01.T01:CDS 35.0%
GGTAGAAAGAGAAATTGAAG+TGG + Chr5:24853997-24854016 MsG0580025832.01.T01:intron 35.0%
GGTGATGAAAGATCAAAATC+CGG + Chr5:24856781-24856800 MsG0580025832.01.T01:CDS 35.0%
GTAAAAATCCAACTTTCCCA+TGG - Chr5:24853188-24853207 None:intergenic 35.0%
GTAACAAAAGAAAGTGAAGG+AGG + Chr5:24852916-24852935 MsG0580025832.01.T01:intron 35.0%
GTCCTTAAAGCCTTTCTTAA+TGG - Chr5:24857006-24857025 None:intergenic 35.0%
GTGACTACTTCAATGGAAAA+TGG + Chr5:24856407-24856426 MsG0580025832.01.T01:CDS 35.0%
GTGATGAAAGATCAAAATCC+GGG + Chr5:24856782-24856801 MsG0580025832.01.T01:CDS 35.0%
TACCGGTACACTCAAATATT+TGG + Chr5:24852837-24852856 MsG0580025832.01.T01:intron 35.0%
TACGGTACACCTCATAAATT+GGG + Chr5:24852481-24852500 MsG0580025832.01.T01:intron 35.0%
TATTGGATCCATTGTTCTTC+TGG - Chr5:24853836-24853855 None:intergenic 35.0%
TCTAGAGATGATGAAGAAGT+GGG + Chr5:24857431-24857450 MsG0580025832.01.T01:CDS 35.0%
TCTCTGATCTTCTTCCATAA+TGG + Chr5:24857556-24857575 MsG0580025832.01.T01:three_prime_UTR 35.0%
TGCTTAAATTGTTCCGGTTT+CGG + Chr5:24856949-24856968 MsG0580025832.01.T01:CDS 35.0%
TGTTCAAAGACTGAACCTTA+TGG + Chr5:24857138-24857157 MsG0580025832.01.T01:CDS 35.0%
TGTTTAATGGCAAAGGTTGA+AGG + Chr5:24853917-24853936 MsG0580025832.01.T01:intron 35.0%
TTCCACGTATTGCTTAAAAC+AGG - Chr5:24856089-24856108 None:intergenic 35.0%
TTCCATAATGGCACATTTGT+TGG + Chr5:24857568-24857587 MsG0580025832.01.T01:three_prime_UTR 35.0%
TTGAGAGGAAAGTTGCTAAA+GGG + Chr5:24857043-24857062 MsG0580025832.01.T01:CDS 35.0%
TTGTGTTATCGTTTGGCAAT+TGG + Chr5:24856878-24856897 MsG0580025832.01.T01:CDS 35.0%
TTTCCATTGAAGTAGTCACA+TGG - Chr5:24856406-24856425 None:intergenic 35.0%
TTTGTAGATGGTTGCTCTTT+AGG - Chr5:24856112-24856131 None:intergenic 35.0%
! AACCGTGACAATTTTGTAGA+TGG - Chr5:24856124-24856143 None:intergenic 35.0%
! AGGGATTAGATTTGAGGTAA+TGG + Chr5:24857257-24857276 MsG0580025832.01.T01:CDS 35.0%
! ATAATGGCACATTTGTTGGT+GGG + Chr5:24857572-24857591 MsG0580025832.01.T01:three_prime_UTR 35.0%
! ATCACCACAATTAAGGCATT+TGG + Chr5:24855908-24855927 MsG0580025832.01.T01:intron 35.0%
! ATTGAAGAAAGTGTGACACA+AGG - Chr5:24855010-24855029 None:intergenic 35.0%
! CCAAGATCATGTTGATTAAC+CGG + Chr5:24854932-24854951 MsG0580025832.01.T01:intron 35.0%
! GGAAAGGAAGCACAAAAAAA+TGG + Chr5:24855342-24855361 MsG0580025832.01.T01:intron 35.0%
! GTGTTCTGAGTTAGATCTAA+TGG + Chr5:24854049-24854068 MsG0580025832.01.T01:intron 35.0%
! TAGAATGGTTCTGTTCTTGA+GGG + Chr5:24853963-24853982 MsG0580025832.01.T01:intron 35.0%
! TATGGGTTTTACTGGAGTTT+AGG + Chr5:24853733-24853752 MsG0580025832.01.T01:intron 35.0%
! TGTCACGGTTTAGATGTTTT+GGG + Chr5:24856134-24856153 MsG0580025832.01.T01:intron 35.0%
! TTAGAATGGTTCTGTTCTTG+AGG + Chr5:24853962-24853981 MsG0580025832.01.T01:intron 35.0%
! TTCTAGAGATGATGAAGAAG+TGG + Chr5:24857430-24857449 MsG0580025832.01.T01:CDS 35.0%
! TTGTCACGGTTTAGATGTTT+TGG + Chr5:24856133-24856152 MsG0580025832.01.T01:intron 35.0%
! TTTAGGAGGAGTTGTTGTTA+TGG + Chr5:24853750-24853769 MsG0580025832.01.T01:intron 35.0%
!! GGTAATGGATGTAACTGAAT+TGG + Chr5:24857272-24857291 MsG0580025832.01.T01:CDS 35.0%
!! TTCCTGTTTTAAGCAATACG+TGG + Chr5:24856084-24856103 MsG0580025832.01.T01:intron 35.0%
!! TTTTATTTCGTCGACGCTTT+TGG + Chr5:24852718-24852737 MsG0580025832.01.T01:intron 35.0%
!!! AGTGACCTCATTGGTTTTTT+TGG - Chr5:24854574-24854593 None:intergenic 35.0%
!!! CTTCACGCAAATTTTTTGGA+AGG + Chr5:24855251-24855270 MsG0580025832.01.T01:intron 35.0%
!!! CTTCTCATTTTGATGGTGAT+TGG + Chr5:24857100-24857119 MsG0580025832.01.T01:CDS 35.0%
!!! TTTTGATGGTGATTGGGATA+AGG + Chr5:24857107-24857126 MsG0580025832.01.T01:CDS 35.0%
AAAATCCAACTTTCCCATGG+TGG - Chr5:24853185-24853204 None:intergenic 40.0%
AAATCCAACTTTCCCATGGT+GGG - Chr5:24853184-24853203 None:intergenic 40.0%
AAATTGGCGAAGGATATGGA+TGG + Chr5:24856844-24856863 MsG0580025832.01.T01:CDS 40.0%
AACATACCTGCATAATGTGG+AGG - Chr5:24855549-24855568 None:intergenic 40.0%
AAGAAATGGCGACCAATACA+CGG - Chr5:24856755-24856774 None:intergenic 40.0%
ACAAAAGAAAGTGAAGGAGG+TGG + Chr5:24853130-24853149 MsG0580025832.01.T01:intron 40.0%
ACCAATGTGAACCTTTATGG+TGG - Chr5:24856702-24856721 None:intergenic 40.0%
ACCATAAAGGTTCACATTGG+TGG + Chr5:24856701-24856720 MsG0580025832.01.T01:CDS 40.0%
ACGGTACACCTCATAAATTG+GGG + Chr5:24852482-24852501 MsG0580025832.01.T01:intron 40.0%
AGATGATGAAGAAGTGGGAT+TGG + Chr5:24857436-24857455 MsG0580025832.01.T01:CDS 40.0%
AGGAAAGTTGCTAAAGGGAA+TGG + Chr5:24857048-24857067 MsG0580025832.01.T01:CDS 40.0%
AGTGCTTCATAGCAATATGG+AGG - Chr5:24855981-24856000 None:intergenic 40.0%
ATGAAGAAGTGGGATTGGAA+GGG + Chr5:24857441-24857460 MsG0580025832.01.T01:CDS 40.0%
ATGGAAGAAGGGTCTTAGAA+AGG - Chr5:24855407-24855426 None:intergenic 40.0%
ATTTGCATGGGTGGTTAAGT+TGG + Chr5:24852036-24852055 MsG0580025832.01.T01:CDS 40.0%
CAAATGAGTGCAATCTTCCA+AGG + Chr5:24856548-24856567 MsG0580025832.01.T01:CDS 40.0%
CACCCATGATTGTATATCAG+AGG - Chr5:24856253-24856272 None:intergenic 40.0%
CATCCATGTGACTACTTCAA+TGG + Chr5:24856400-24856419 MsG0580025832.01.T01:CDS 40.0%
CATGAAACACATTCCTTCAC+TGG - Chr5:24852929-24852948 None:intergenic 40.0%
CCGGTTAATCAACATGATCT+TGG - Chr5:24854935-24854954 None:intergenic 40.0%
CGAAAAATTGGCGAAGGATA+TGG + Chr5:24856840-24856859 MsG0580025832.01.T01:CDS 40.0%
CGTTAACGAAAAATTGGCGA+AGG + Chr5:24856834-24856853 MsG0580025832.01.T01:CDS 40.0%
CTACGGTACACCTCATAAAT+TGG + Chr5:24852480-24852499 MsG0580025832.01.T01:intron 40.0%
CTCAGAACACAGATTTACCA+TGG - Chr5:24854039-24854058 None:intergenic 40.0%
CTTGGAAGATTGCACTCATT+TGG - Chr5:24856550-24856569 None:intergenic 40.0%
GAGACCAAATGCCTTAATTG+TGG - Chr5:24855915-24855934 None:intergenic 40.0%
GAGTATAACCCAAGAAACCT+AGG + Chr5:24854983-24855002 MsG0580025832.01.T01:intron 40.0%
GATTTGATACTGACAGACCA+TGG + Chr5:24854019-24854038 MsG0580025832.01.T01:intron 40.0%
GGAGTCAAAGCATATATGTG+AGG - Chr5:24854684-24854703 None:intergenic 40.0%
GGATCGCGTTAACGAAAAAT+TGG + Chr5:24856828-24856847 MsG0580025832.01.T01:CDS 40.0%
GTCATGCAGTTCGATAAGTT+TGG + Chr5:24852889-24852908 MsG0580025832.01.T01:intron 40.0%
GTGCTTCATAGCAATATGGA+GGG - Chr5:24855980-24855999 None:intergenic 40.0%
GTTCATGATCCTAAGTGCTT+GGG - Chr5:24854833-24854852 None:intergenic 40.0%
GTTGCTAAAGGGAATGGAAT+TGG + Chr5:24857054-24857073 MsG0580025832.01.T01:CDS 40.0%
GTTTCTTCATCCTCTAGATC+TGG + Chr5:24853279-24853298 MsG0580025832.01.T01:intron 40.0%
GTTTGAATCAGGTCTTCCAT+TGG - Chr5:24856506-24856525 None:intergenic 40.0%
TCATCACCTTGCACAAGAAA+TGG - Chr5:24856769-24856788 None:intergenic 40.0%
TCCACCATAAAGGTTCACAT+TGG + Chr5:24856698-24856717 MsG0580025832.01.T01:CDS 40.0%
TGGAAGAAGGGTCTTAGAAA+GGG - Chr5:24855406-24855425 None:intergenic 40.0%
TGTTCATGATCCTAAGTGCT+TGG - Chr5:24854834-24854853 None:intergenic 40.0%
! AAAGTGTCAGGTTCAAACCT+TGG - Chr5:24856568-24856587 None:intergenic 40.0%
! AACATGATCTTGGTGTGTTG+AGG - Chr5:24854925-24854944 None:intergenic 40.0%
! AATCCTTTTCCGTTCGCTAA+CGG + Chr5:24857333-24857352 MsG0580025832.01.T01:CDS 40.0%
! CACCAACAAATGTGCCATTA+TGG - Chr5:24857573-24857592 None:intergenic 40.0%
! CATAATGGCACATTTGTTGG+TGG + Chr5:24857571-24857590 MsG0580025832.01.T01:three_prime_UTR 40.0%
! GAAAGACTCCCCTTTGTTTA+AGG + Chr5:24852191-24852210 MsG0580025832.01.T01:intron 40.0%
! GTTCAATTTTGGATCGTTGC+AGG - Chr5:24853335-24853354 None:intergenic 40.0%
! TGGAGTGCTTCATAGCAATA+TGG - Chr5:24855984-24856003 None:intergenic 40.0%
! TTTGGGGTTTGAAAGCAACT+TGG + Chr5:24857636-24857655 MsG0580025832.01.T01:three_prime_UTR 40.0%
!! AAACATGGTGGTGGTTAGAA+TGG + Chr5:24853948-24853967 MsG0580025832.01.T01:intron 40.0%
!! CTTAGTTGGAGAAAAGTGTC+AGG - Chr5:24856580-24856599 None:intergenic 40.0%
!!! TGGTGGGAGACTTTTGTTTT+TGG + Chr5:24857588-24857607 MsG0580025832.01.T01:three_prime_UTR 40.0%
AAAGTGTGACACAAGGACCT+AGG - Chr5:24855003-24855022 None:intergenic 45.0%
AACCATGATCCCAAGCACTT+AGG + Chr5:24854821-24854840 MsG0580025832.01.T01:intron 45.0%
ACACAAGGACCTAGGTTTCT+TGG - Chr5:24854995-24855014 None:intergenic 45.0%
ACCTTATGGAAAGGGTGAGA+AGG + Chr5:24857152-24857171 MsG0580025832.01.T01:CDS 45.0%
AGAGAGTGAAGTGACCTCAT+TGG - Chr5:24854583-24854602 None:intergenic 45.0%
ATACCTGCATAATGTGGAGG+TGG - Chr5:24855546-24855565 None:intergenic 45.0%
ATCCTAAGTGCTTGGGATCA+TGG - Chr5:24854826-24854845 None:intergenic 45.0%
ATGTCTCACTCTTCACTCCT+TGG - Chr5:24857471-24857490 None:intergenic 45.0%
CACAAGGACCTAGGTTTCTT+GGG - Chr5:24854994-24855013 None:intergenic 45.0%
CCTCATAAATTGGGGTGTAC+CGG + Chr5:24852490-24852509 MsG0580025832.01.T01:intron 45.0%
GAAACACATTCCTTCACTGG+TGG - Chr5:24854129-24854148 None:intergenic 45.0%
GATGAAGAAGTGGGATTGGA+AGG + Chr5:24857440-24857459 MsG0580025832.01.T01:CDS 45.0%
GCCACCAATGTGAACCTTTA+TGG - Chr5:24856705-24856724 None:intergenic 45.0%
GGAAAGGGTGAGAAGGAAAT+TGG + Chr5:24857159-24857178 MsG0580025832.01.T01:CDS 45.0%
GGTATTTGTGTTGAGGGAGA+TGG + Chr5:24851992-24852011 MsG0580025832.01.T01:CDS 45.0%
TCCTTCTCACCCTTTCCATA+AGG - Chr5:24857156-24857175 None:intergenic 45.0%
TCGGTGTAACTAAACTCCGA+GGG - Chr5:24856178-24856197 None:intergenic 45.0%
TTCCAAGTATCTATAGGCCC+AGG - Chr5:24857402-24857421 None:intergenic 45.0%
TTGGCATTGTTGAGACCAGA+TGG + Chr5:24857291-24857310 MsG0580025832.01.T01:CDS 45.0%
TTTGTGTTGAGGGAGATGGT+TGG + Chr5:24851996-24852015 MsG0580025832.01.T01:CDS 45.0%
! AATGGTTCTGTTCTTGAGGG+TGG + Chr5:24853966-24853985 MsG0580025832.01.T01:intron 45.0%
! ATGATCTTGGTGTGTTGAGG+AGG - Chr5:24854922-24854941 None:intergenic 45.0%
! GGGTTTTACTGGAGTTTAGG+AGG + Chr5:24853736-24853755 MsG0580025832.01.T01:intron 45.0%
! GTGTTCATTGGTGTTTGCCT+GGG + Chr5:24857382-24857401 MsG0580025832.01.T01:CDS 45.0%
! TGATCTTGGTGTGTTGAGGA+GGG - Chr5:24854921-24854940 None:intergenic 45.0%
! TGTGTTCATTGGTGTTTGCC+TGG + Chr5:24857381-24857400 MsG0580025832.01.T01:CDS 45.0%
! TTCGGTGTAACTAAACTCCG+AGG - Chr5:24856179-24856198 None:intergenic 45.0%
! TTTTCCCACCATGGGAAAGT+TGG + Chr5:24853177-24853196 MsG0580025832.01.T01:intron 45.0%
!! ACGGTTTAGATGTTTTGGGC+CGG + Chr5:24856138-24856157 MsG0580025832.01.T01:intron 45.0%
!! AGATGTTTTGGGCCGGTTAA+TGG + Chr5:24856145-24856164 MsG0580025832.01.T01:intron 45.0%
!! TGTGAACCTTTATGGTGGAC+CGG - Chr5:24856697-24856716 None:intergenic 45.0%
!!! AGGGAAGTATTTTCCCACCA+TGG + Chr5:24853168-24853187 MsG0580025832.01.T01:intron 45.0%
!!! AGGGAAGTATTTTCCCACCA+TGG - Chr5:24853187-24853168 None:intergenic 45.0%
!!! GGGAAGTATTTTCCCACCAT+GGG + Chr5:24853169-24853188 MsG0580025832.01.T01:intron 45.0%
!!! GGGAAGTATTTTCCCACCAT+GGG - Chr5:24853188-24853169 None:intergenic 45.0%
!! TATATATATTTAATTAAATG+AGG + Chr5:24855775-24855794 MsG0580025832.01.T01:intron 5.0%
!!! TTTAATTTTTATAATTATCA+AGG + Chr5:24852750-24852769 MsG0580025832.01.T01:intron 5.0%
ACACCGTTAGCGAACGGAAA+AGG - Chr5:24857339-24857358 None:intergenic 50.0%
ACCTTAAACGCCACCAGTGA+AGG + Chr5:24854116-24854135 MsG0580025832.01.T01:intron 50.0%
AGTGAAGGAGGTGGCGTTTA+AGG + Chr5:24853139-24853158 MsG0580025832.01.T01:intron 50.0%
ATGTGGAGGTGGAGAAGTAG+TGG - Chr5:24855535-24855554 None:intergenic 50.0%
CCGGTACACCCCAATTTATG+AGG - Chr5:24852493-24852512 None:intergenic 50.0%
CCTAAACCGGTCCACCATAA+AGG + Chr5:24856688-24856707 MsG0580025832.01.T01:CDS 50.0%
GATGGTGATTGGGATAAGGC+TGG + Chr5:24857111-24857130 MsG0580025832.01.T01:CDS 50.0%
TAAGCTCCTGGATGACCATC+TGG - Chr5:24857309-24857328 None:intergenic 50.0%
TCTCCACCTCCACATTATGC+AGG + Chr5:24855540-24855559 MsG0580025832.01.T01:intron 50.0%
TGCCTGGGCCTATAGATACT+TGG + Chr5:24857397-24857416 MsG0580025832.01.T01:CDS 50.0%
TGGTCGCCATTTCTTGTGCA+AGG + Chr5:24856760-24856779 MsG0580025832.01.T01:CDS 50.0%
TTCGGAACACCGTTAGCGAA+CGG - Chr5:24857345-24857364 None:intergenic 50.0%
TTGAGACCAGATGGTCATCC+AGG + Chr5:24857300-24857319 MsG0580025832.01.T01:CDS 50.0%
! AAGGAGGTGGCGTTTAAGGT+GGG + Chr5:24853143-24853162 MsG0580025832.01.T01:intron 50.0%
! GTGGCGTTTAAGGTGGGAAA+GGG + Chr5:24853149-24853168 MsG0580025832.01.T01:intron 50.0%
! GTGGCGTTTAAGGTGGGAAA+GGG - Chr5:24853168-24853149 None:intergenic 50.0%
! TCACTGGTGGCGTTTAAGGT+GGG - Chr5:24854116-24854135 None:intergenic 50.0%
! TCCTTCACTGGTGGCGTTTA+AGG - Chr5:24854120-24854139 None:intergenic 50.0%
! TTCACTGGTGGCGTTTAAGG+TGG - Chr5:24854117-24854136 None:intergenic 50.0%
!! ATGGGTGGTTAAGTTGGTGG+AGG + Chr5:24852042-24852061 MsG0580025832.01.T01:CDS 50.0%
!! CCTTTATGGTGGACCGGTTT+AGG - Chr5:24856691-24856710 None:intergenic 50.0%
!! TGCATGGGTGGTTAAGTTGG+TGG + Chr5:24852039-24852058 MsG0580025832.01.T01:CDS 50.0%
AACTAAACTCCGAGGGCCGA+GGG - Chr5:24856171-24856190 None:intergenic 55.0%
CTGTTCTTGAGGGTGGAGAG+AGG + Chr5:24853973-24853992 MsG0580025832.01.T01:intron 55.0%
GAAGGAGGTGGCGTTTAAGG+TGG + Chr5:24853142-24853161 MsG0580025832.01.T01:intron 55.0%
GAGGTGGAGAAGTAGTGGCA+TGG - Chr5:24855530-24855549 None:intergenic 55.0%
GTGTTGAGGAGGGAGGATTC+AGG - Chr5:24854911-24854930 None:intergenic 55.0%
TAACTAAACTCCGAGGGCCG+AGG - Chr5:24856172-24856191 None:intergenic 55.0%
TTCTTGAGGGTGGAGAGAGG+AGG + Chr5:24853976-24853995 MsG0580025832.01.T01:intron 55.0%
! GGTGGCGTTTAAGGTGGGAA+AGG + Chr5:24853148-24853167 MsG0580025832.01.T01:intron 55.0%
! GGTGGCGTTTAAGGTGGGAA+AGG - Chr5:24853167-24853148 None:intergenic 55.0%
! TCTTGGTGTGTTGAGGAGGG+AGG - Chr5:24854918-24854937 None:intergenic 55.0%
GGGATTGGAAGGGACAGCCA+AGG + Chr5:24857451-24857470 MsG0580025832.01.T01:CDS 60.0%
TTGGGCCGGTTAATGGCCCT+CGG + Chr5:24856152-24856171 MsG0580025832.01.T01:intron 60.0%
GAGGGCCGAGGGCCATTAAC+CGG - Chr5:24856160-24856179 None:intergenic 65.0%
GGTTAATGGCCCTCGGCCCT+CGG + Chr5:24856159-24856178 MsG0580025832.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 24851956 24857753 24851956 ID=MsG0580025832.01;Name=MsG0580025832.01
Chr5 mRNA 24851956 24857753 24851956 ID=MsG0580025832.01.T01;Parent=MsG0580025832.01;Name=MsG0580025832.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0.5|1|1|1|2|268|407
Chr5 exon 24851956 24852067 24851956 ID=MsG0580025832.01.T01:exon:4940;Parent=MsG0580025832.01.T01
Chr5 exon 24856374 24857753 24856374 ID=MsG0580025832.01.T01:exon:4941;Parent=MsG0580025832.01.T01
Chr5 CDS 24851956 24852067 24851956 ID=MsG0580025832.01.T01:cds;Parent=MsG0580025832.01.T01
Chr5 CDS 24856374 24857485 24856374 ID=MsG0580025832.01.T01:cds;Parent=MsG0580025832.01.T01
Chr5 three_prime_UTR 24857486 24857753 24857486 ID=MsG0580025832.01.T01:three_prime_utr;Parent=MsG0580025832.01.T01
Gene Sequence

>MsG0580025832.01.T01

ATGAAGAAAAGAGTTTCTCTTAAGGATATGATATCAGGTATTTGTGTTGAGGGAGATGGTTGGAGTTCGAGAAAAAATTTATTTGCATGGGTGGTTAAGTTGGTGGAGGAGTTAAATGACAAACACAAAATTGATGAGCATCCATGTGACTACTTCAATGGAAAATGGATTCATGACAATAAAGGTCCTTTATATAGTGGAACAACATGTGGAACAATCAAAGAAGGACAAAATTGTATCACCAATGGAAGACCTGATTCAAACTACCTTTACTATAGATGGAAACCAAATGAGTGCAATCTTCCAAGGTTTGAACCTGACACTTTTCTCCAACTAAGCAAAAACAAACACATATCTTTTGTTGGTGATTCTTTAGCTAGAAACCAATTTGAGTCTCTTCTTTGTATGTTAGCAACTGTTTCAAAACCTAAACCGGTCCACCATAAAGGTTCACATTGGTGGCATTTTTCTTCTCATAATGCAACATTATCCGTGTATTGGTCGCCATTTCTTGTGCAAGGTGATGAAAGATCAAAATCCGGGCCAAGTTTTAATACAATACATTTGGATCGCGTTAACGAAAAATTGGCGAAGGATATGGATGGAATCGACTTGATTGTGTTATCGTTTGGCAATTGGTTTATTAATGTTCCTTCGGTTTATTATGAGAATGGTTTGGTTTTAGGATGCTTAAATTGTTCCGGTTTCGGTCTTAATTACACTGATATTGGTTTTTATGTTCCATTAAGAAAGGCTTTAAGGACTTGTCTTAATAGCATAATTGAGAGGAAAGTTGCTAAAGGGAATGGAATTGGTGTAATTGTGAAAACTTTTTCACCTTCTCATTTTGATGGTGATTGGGATAAGGCTGGTACATGTTCAAAGACTGAACCTTATGGAAAGGGTGAGAAGGAAATTGGAAAAATGGAAAGTGAGATTAGAAGGATTGAGATTGAAGAAGTGGAAAATGCTAAGAAAAAAGCAAATGCATTTGGAGGGATTAGATTTGAGGTAATGGATGTAACTGAATTGGCATTGTTGAGACCAGATGGTCATCCAGGAGCTTATATGAATCCTTTTCCGTTCGCTAACGGTGTTCCGAAGTATGTGCAAAATGATTGTGTTCATTGGTGTTTGCCTGGGCCTATAGATACTTGGAATGAGATTTTTCTAGAGATGATGAAGAAGTGGGATTGGAAGGGACAGCCAAGGAGTGAAGAGTGA

Protein sequence

>MsG0580025832.01.T01

MKKRVSLKDMISGICVEGDGWSSRKNLFAWVVKLVEELNDKHKIDEHPCDYFNGKWIHDNKGPLYSGTTCGTIKEGQNCITNGRPDSNYLYYRWKPNECNLPRFEPDTFLQLSKNKHISFVGDSLARNQFESLLCMLATVSKPKPVHHKGSHWWHFSSHNATLSVYWSPFLVQGDERSKSGPSFNTIHLDRVNEKLAKDMDGIDLIVLSFGNWFINVPSVYYENGLVLGCLNCSGFGLNYTDIGFYVPLRKALRTCLNSIIERKVAKGNGIGVIVKTFSPSHFDGDWDKAGTCSKTEPYGKGEKEIGKMESEIRRIEIEEVENAKKKANAFGGIRFEVMDVTELALLRPDGHPGAYMNPFPFANGVPKYVQNDCVHWCLPGPIDTWNEIFLEMMKKWDWKGQPRSEE*