Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044572.01.T01 | XP_013445584.1 | 93.267 | 505 | 34 | 0 | 26 | 530 | 712 | 1216 | 0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044572.01.T01 | A0A072U1C5 | 93.267 | 505 | 34 | 0 | 26 | 530 | 712 | 1216 | 0.0 | 932 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000097.01 | MsG0880044572.01 | -0.802389 | 5.742073e-49 | 2.809402e-46 |
| MsG0180000116.01 | MsG0880044572.01 | 0.802409 | 5.686720e-49 | 2.783698e-46 |
| MsG0180000470.01 | MsG0880044572.01 | 0.817126 | 3.876008e-52 | 2.798639e-49 |
| MsG0180001063.01 | MsG0880044572.01 | 0.829008 | 6.546183e-55 | 6.615110e-52 |
| MsG0180001971.01 | MsG0880044572.01 | 0.807392 | 5.169121e-50 | 2.875758e-47 |
| MsG0880043941.01 | MsG0880044572.01 | 0.811456 | 6.939427e-51 | 4.297667e-48 |
| MsG0880044572.01 | MsG0880044573.01 | 0.882910 | 7.009435e-71 | 4.349761e-67 |
| MsG0880044572.01 | MsG0880044574.01 | 0.804823 | 1.795205e-49 | 9.349128e-47 |
| MsG0180004085.01 | MsG0880044572.01 | 0.850108 | 2.101682e-60 | 4.072493e-57 |
| MsG0180004926.01 | MsG0880044572.01 | 0.806238 | 9.063365e-50 | 4.894547e-47 |
| MsG0180005050.01 | MsG0880044572.01 | 0.800342 | 1.507726e-48 | 7.003460e-46 |
| MsG0180005185.01 | MsG0880044572.01 | 0.801958 | 7.044067e-49 | 3.408451e-46 |
| MsG0180005457.01 | MsG0880044572.01 | 0.826476 | 2.657471e-54 | 2.494759e-51 |
| MsG0180006054.01 | MsG0880044572.01 | 0.835119 | 2.020279e-56 | 2.446740e-53 |
| MsG0780040576.01 | MsG0880044572.01 | -0.864178 | 1.465972e-64 | 4.560781e-61 |
| MsG0780041201.01 | MsG0880044572.01 | 0.801507 | 8.715322e-49 | 4.169396e-46 |
| MsG0880042031.01 | MsG0880044572.01 | 0.833518 | 5.093462e-56 | 5.880103e-53 |
| MsG0880042161.01 | MsG0880044572.01 | 0.825828 | 3.787736e-54 | 3.491126e-51 |
| MsG0880042247.01 | MsG0880044572.01 | 0.821599 | 3.705916e-53 | 3.028444e-50 |
| MsG0880042434.01 | MsG0880044572.01 | 0.807718 | 4.408280e-50 | 2.473302e-47 |
| MsG0880043214.01 | MsG0880044572.01 | 0.825478 | 4.587086e-54 | 4.185628e-51 |
| MsG0280011376.01 | MsG0880044572.01 | 0.803998 | 2.666899e-49 | 1.359685e-46 |
| MsG0380011895.01 | MsG0880044572.01 | 0.811442 | 6.987417e-51 | 4.325874e-48 |
| MsG0380012085.01 | MsG0880044572.01 | 0.822619 | 2.150638e-53 | 1.809559e-50 |
| MsG0380012091.01 | MsG0880044572.01 | 0.804376 | 2.225183e-49 | 1.145505e-46 |
| MsG0380012365.01 | MsG0880044572.01 | 0.807142 | 5.840545e-50 | 3.228045e-47 |
| MsG0380012702.01 | MsG0880044572.01 | 0.817377 | 3.404200e-52 | 2.475061e-49 |
| MsG0380014251.01 | MsG0880044572.01 | 0.810205 | 1.293853e-50 | 7.751293e-48 |
| MsG0380014727.01 | MsG0880044572.01 | 0.817580 | 3.063953e-52 | 2.239961e-49 |
| MsG0680030995.01 | MsG0880044572.01 | 0.801958 | 7.044067e-49 | 3.408451e-46 |
| MsG0680031042.01 | MsG0880044572.01 | 0.820284 | 7.440949e-53 | 5.862464e-50 |
| MsG0680031377.01 | MsG0880044572.01 | -0.814379 | 1.587877e-51 | 1.063767e-48 |
| MsG0680031379.01 | MsG0880044572.01 | 0.804572 | 2.025935e-49 | 1.048176e-46 |
| MsG0680032058.01 | MsG0880044572.01 | 0.842768 | 2.113901e-58 | 3.238042e-55 |
| MsG0680033602.01 | MsG0880044572.01 | 0.803367 | 3.606726e-49 | 1.809071e-46 |
| MsG0680033639.01 | MsG0880044572.01 | 0.836131 | 1.120239e-56 | 1.398809e-53 |
| MsG0680035005.01 | MsG0880044572.01 | 0.814755 | 1.310770e-51 | 8.870483e-49 |
| MsG0480019335.01 | MsG0880044572.01 | 0.810284 | 1.244167e-50 | 7.469069e-48 |
| MsG0480020322.01 | MsG0880044572.01 | 0.832909 | 7.224454e-56 | 8.188831e-53 |
| MsG0480020323.01 | MsG0880044572.01 | 0.852153 | 5.563071e-61 | 1.151966e-57 |
| MsG0480021948.01 | MsG0880044572.01 | 0.804975 | 1.668877e-49 | 8.725061e-47 |
| MsG0480022068.01 | MsG0880044572.01 | 0.839157 | 1.874483e-57 | 2.566152e-54 |
| MsG0480022145.01 | MsG0880044572.01 | 0.815960 | 7.072360e-52 | 4.946232e-49 |
| MsG0480022361.01 | MsG0880044572.01 | 0.819725 | 9.987479e-53 | 7.747615e-50 |
| MsG0480022615.01 | MsG0880044572.01 | -0.815698 | 8.089365e-52 | 5.617228e-49 |
| MsG0480023045.01 | MsG0880044572.01 | 0.829157 | 6.021341e-55 | 6.112270e-52 |
| MsG0480023248.01 | MsG0880044572.01 | 0.834558 | 2.795584e-56 | 3.329808e-53 |
| MsG0480023251.01 | MsG0880044572.01 | 0.862734 | 4.107752e-64 | 1.215574e-60 |
| MsG0480023670.01 | MsG0880044572.01 | 0.822214 | 2.670221e-53 | 2.220690e-50 |
| MsG0480023937.01 | MsG0880044572.01 | 0.816587 | 5.121888e-52 | 3.644028e-49 |
| MsG0580024363.01 | MsG0880044572.01 | -0.826054 | 3.347494e-54 | 3.105274e-51 |
| MsG0580025758.01 | MsG0880044572.01 | 0.806227 | 9.113360e-50 | 4.920155e-47 |
| MsG0580025832.01 | MsG0880044572.01 | 0.808647 | 2.795043e-50 | 1.606793e-47 |
| MsG0580026032.01 | MsG0880044572.01 | 0.815564 | 8.664930e-52 | 5.994842e-49 |
| MsG0380016182.01 | MsG0880044572.01 | 0.814471 | 1.514658e-51 | 1.017294e-48 |
| MsG0380016285.01 | MsG0880044572.01 | 0.820889 | 5.402785e-53 | 4.329031e-50 |
| MsG0380016391.01 | MsG0880044572.01 | 0.803215 | 3.877576e-49 | 1.937406e-46 |
| MsG0380017048.01 | MsG0880044572.01 | 0.830128 | 3.495503e-55 | 3.649926e-52 |
| MsG0380017220.01 | MsG0880044572.01 | 0.861762 | 8.170028e-64 | 2.336745e-60 |
| MsG0380017551.01 | MsG0880044572.01 | -0.818395 | 2.004393e-52 | 1.498694e-49 |
| MsG0480018236.01 | MsG0880044572.01 | 0.835208 | 1.918007e-56 | 2.329466e-53 |
| MsG0480018318.01 | MsG0880044572.01 | 0.837614 | 4.685209e-57 | 6.119397e-54 |
| MsG0580026304.01 | MsG0880044572.01 | 0.825977 | 3.491282e-54 | 3.231686e-51 |
| MsG0580029285.01 | MsG0880044572.01 | 0.817355 | 3.442143e-52 | 2.501033e-49 |
| MsG0580029554.01 | MsG0880044572.01 | 0.820115 | 8.135549e-53 | 6.380912e-50 |
| MsG0280006588.01 | MsG0880044572.01 | 0.819250 | 1.282018e-52 | 9.813923e-50 |
| MsG0280006770.01 | MsG0880044572.01 | 0.814160 | 1.774316e-51 | 1.181595e-48 |
| MsG0280007072.01 | MsG0880044572.01 | 0.813592 | 2.367028e-51 | 1.552305e-48 |
| MsG0280007864.01 | MsG0880044572.01 | -0.847246 | 1.305447e-59 | 2.306230e-56 |
| MsG0280008112.01 | MsG0880044572.01 | 0.827495 | 1.515704e-54 | 1.465716e-51 |
| MsG0280008113.01 | MsG0880044572.01 | 0.809793 | 1.587510e-50 | 9.409189e-48 |
| MsG0280008456.01 | MsG0880044572.01 | 0.806645 | 7.437436e-50 | 4.057996e-47 |
| MsG0280008894.01 | MsG0880044572.01 | 0.845939 | 2.969808e-59 | 5.030190e-56 |
| MsG0280009551.01 | MsG0880044572.01 | 0.818006 | 2.455081e-52 | 1.815969e-49 |
| MsG0280009754.01 | MsG0880044572.01 | 0.808583 | 2.883395e-50 | 1.654885e-47 |
| MsG0280010443.01 | MsG0880044572.01 | 0.805369 | 1.379776e-49 | 7.286876e-47 |
| MsG0780036128.01 | MsG0880044572.01 | 0.831028 | 2.105101e-55 | 2.256712e-52 |
| MsG0780038827.01 | MsG0880044572.01 | 0.801009 | 1.102159e-48 | 5.207219e-46 |
| MsG0780038833.01 | MsG0880044572.01 | 0.809289 | 2.036975e-50 | 1.191244e-47 |
| MsG0780039573.01 | MsG0880044572.01 | 0.814990 | 1.162328e-51 | 7.916329e-49 |
| MsG0780039867.01 | MsG0880044572.01 | -0.805332 | 1.404836e-49 | 7.412030e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044572.01.T01 | MTR_8g464870 | 93.267 | 505 | 34 | 0 | 26 | 530 | 712 | 1216 | 0.0 | 932 |
| MsG0880044572.01.T01 | MTR_3g055230 | 50.192 | 522 | 234 | 9 | 26 | 530 | 717 | 1229 | 3.02e-153 | 470 |
| MsG0880044572.01.T01 | MTR_3g055230 | 49.621 | 528 | 240 | 9 | 26 | 536 | 717 | 1235 | 4.61e-153 | 470 |
| MsG0880044572.01.T01 | MTR_3g055230 | 50.192 | 522 | 234 | 9 | 26 | 530 | 717 | 1229 | 1.48e-152 | 470 |
| MsG0880044572.01.T01 | MTR_3g055210 | 47.358 | 511 | 211 | 6 | 27 | 530 | 705 | 1164 | 1.94e-136 | 424 |
| MsG0880044572.01.T01 | MTR_3g053200 | 45.946 | 518 | 261 | 7 | 27 | 529 | 706 | 1219 | 1.68e-131 | 415 |
| MsG0880044572.01.T01 | MTR_3g053180 | 47.489 | 438 | 212 | 7 | 27 | 451 | 706 | 1138 | 1.60e-116 | 371 |
| MsG0880044572.01.T01 | MTR_3g053180 | 46.222 | 450 | 212 | 7 | 27 | 451 | 706 | 1150 | 1.20e-114 | 366 |
| MsG0880044572.01.T01 | MTR_3g055230 | 51.133 | 309 | 140 | 3 | 26 | 331 | 717 | 1017 | 3.74e-89 | 296 |
| MsG0880044572.01.T01 | MTR_5g092190 | 31.159 | 552 | 307 | 19 | 30 | 522 | 721 | 1258 | 1.90e-51 | 190 |
| MsG0880044572.01.T01 | MTR_5g085400 | 28.305 | 537 | 287 | 15 | 72 | 522 | 985 | 1509 | 5.84e-40 | 156 |
| MsG0880044572.01.T01 | MTR_5g085400 | 24.818 | 548 | 314 | 15 | 32 | 521 | 695 | 1202 | 1.55e-28 | 121 |
| MsG0880044572.01.T01 | MTR_1g031830 | 24.800 | 625 | 341 | 18 | 22 | 522 | 751 | 1370 | 3.12e-38 | 151 |
| MsG0880044572.01.T01 | MTR_3g062320 | 28.312 | 551 | 322 | 15 | 32 | 522 | 693 | 1230 | 4.70e-35 | 141 |
| MsG0880044572.01.T01 | MTR_3g464810 | 26.962 | 497 | 319 | 15 | 32 | 521 | 695 | 1154 | 5.65e-30 | 125 |
| MsG0880044572.01.T01 | MTR_3g464810 | 27.070 | 314 | 192 | 10 | 220 | 522 | 1012 | 1299 | 1.88e-17 | 87.0 |
| MsG0880044572.01.T01 | MTR_3g062090 | 26.884 | 398 | 223 | 12 | 149 | 522 | 1048 | 1401 | 2.59e-27 | 117 |
| MsG0880044572.01.T01 | MTR_3g062090 | 27.273 | 484 | 286 | 14 | 2 | 444 | 668 | 1126 | 5.55e-27 | 116 |
| MsG0880044572.01.T01 | MTR_3g062090 | 26.884 | 398 | 223 | 12 | 149 | 522 | 1048 | 1401 | 5.39e-27 | 116 |
| MsG0880044572.01.T01 | MTR_3g062090 | 26.875 | 480 | 285 | 13 | 2 | 440 | 668 | 1122 | 1.55e-26 | 115 |
| MsG0880044572.01.T01 | MTR_3g062420 | 25.355 | 422 | 225 | 14 | 145 | 522 | 1053 | 1428 | 1.11e-26 | 115 |
| MsG0880044572.01.T01 | MTR_3g062420 | 25.285 | 526 | 310 | 16 | 32 | 521 | 710 | 1188 | 1.14e-22 | 103 |
| MsG0880044572.01.T01 | MTR_3g464950 | 25.180 | 556 | 330 | 19 | 32 | 522 | 695 | 1229 | 1.54e-25 | 112 |
| MsG0880044572.01.T01 | MTR_3g464840 | 26.493 | 536 | 341 | 17 | 16 | 521 | 676 | 1188 | 1.97e-25 | 112 |
| MsG0880044572.01.T01 | MTR_3g464840 | 24.084 | 382 | 205 | 11 | 149 | 521 | 1027 | 1332 | 6.26e-20 | 94.7 |
| MsG0880044572.01.T01 | MTR_3g464870 | 26.030 | 461 | 293 | 13 | 25 | 466 | 693 | 1124 | 1.06e-24 | 109 |
| MsG0880044572.01.T01 | MTR_3g464870 | 25.306 | 490 | 305 | 18 | 78 | 522 | 866 | 1339 | 9.86e-19 | 90.9 |
| MsG0880044572.01.T01 | MTR_3g063010 | 26.087 | 414 | 222 | 14 | 149 | 522 | 1044 | 1413 | 1.07e-24 | 109 |
| MsG0880044572.01.T01 | MTR_3g063010 | 25.223 | 448 | 260 | 13 | 35 | 442 | 710 | 1122 | 3.82e-20 | 95.5 |
| MsG0880044572.01.T01 | MTR_3g464870 | 26.030 | 461 | 293 | 13 | 25 | 466 | 693 | 1124 | 1.18e-24 | 109 |
| MsG0880044572.01.T01 | MTR_3g464870 | 25.306 | 490 | 305 | 18 | 78 | 522 | 866 | 1339 | 6.91e-19 | 91.3 |
| MsG0880044572.01.T01 | MTR_3g451150 | 30.588 | 425 | 246 | 16 | 32 | 440 | 711 | 1102 | 1.60e-24 | 109 |
| MsG0880044572.01.T01 | MTR_3g451150 | 24.651 | 430 | 217 | 13 | 145 | 522 | 1025 | 1399 | 5.12e-21 | 98.2 |
| MsG0880044572.01.T01 | MTR_3g452250 | 30.189 | 424 | 249 | 16 | 32 | 440 | 711 | 1102 | 5.69e-24 | 107 |
| MsG0880044572.01.T01 | MTR_3g452250 | 24.651 | 430 | 217 | 13 | 145 | 522 | 1025 | 1399 | 5.12e-21 | 98.2 |
| MsG0880044572.01.T01 | MTR_3g464920 | 26.190 | 462 | 280 | 15 | 25 | 461 | 693 | 1118 | 1.35e-23 | 106 |
| MsG0880044572.01.T01 | MTR_3g062140 | 27.387 | 398 | 216 | 13 | 149 | 522 | 1001 | 1349 | 1.80e-23 | 105 |
| MsG0880044572.01.T01 | MTR_3g062140 | 26.620 | 432 | 246 | 14 | 35 | 442 | 693 | 1077 | 8.21e-16 | 81.6 |
| MsG0880044572.01.T01 | MTR_3g062970 | 26.386 | 451 | 265 | 14 | 32 | 442 | 708 | 1131 | 2.32e-22 | 102 |
| MsG0880044572.01.T01 | MTR_3g466580 | 31.102 | 254 | 166 | 5 | 16 | 268 | 687 | 932 | 4.12e-22 | 101 |
| MsG0880044572.01.T01 | MTR_3g461460 | 52.525 | 99 | 42 | 2 | 387 | 480 | 1 | 99 | 7.52e-22 | 91.7 |
| MsG0880044572.01.T01 | MTR_0854s0010 | 30.357 | 280 | 168 | 7 | 30 | 302 | 170 | 429 | 1.14e-21 | 99.0 |
| MsG0880044572.01.T01 | MTR_3g467640 | 35.897 | 234 | 136 | 5 | 32 | 261 | 553 | 776 | 1.66e-21 | 99.4 |
| MsG0880044572.01.T01 | MTR_3g062220 | 33.086 | 269 | 168 | 6 | 2 | 263 | 657 | 920 | 1.70e-21 | 99.4 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 745 | 1128 | 8.37e-21 | 97.4 |
| MsG0880044572.01.T01 | MTR_3g435040 | 26.531 | 441 | 269 | 14 | 35 | 442 | 403 | 821 | 1.62e-19 | 93.2 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 745 | 1128 | 1.27e-20 | 97.1 |
| MsG0880044572.01.T01 | MTR_3g435040 | 26.697 | 442 | 267 | 15 | 35 | 442 | 403 | 821 | 2.76e-19 | 92.8 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 743 | 1126 | 1.41e-20 | 96.7 |
| MsG0880044572.01.T01 | MTR_3g435040 | 27.273 | 440 | 265 | 16 | 35 | 442 | 403 | 819 | 2.05e-19 | 93.2 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 745 | 1128 | 1.43e-20 | 96.7 |
| MsG0880044572.01.T01 | MTR_3g435040 | 26.697 | 442 | 267 | 15 | 35 | 442 | 403 | 821 | 2.70e-19 | 92.8 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 960 | 1343 | 1.61e-20 | 96.7 |
| MsG0880044572.01.T01 | MTR_3g435040 | 26.697 | 442 | 267 | 15 | 35 | 442 | 618 | 1036 | 2.60e-19 | 92.8 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 743 | 1126 | 1.63e-20 | 96.7 |
| MsG0880044572.01.T01 | MTR_3g435040 | 27.273 | 440 | 265 | 16 | 35 | 442 | 403 | 819 | 1.74e-19 | 93.2 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.293 | 427 | 223 | 15 | 149 | 522 | 960 | 1343 | 1.67e-20 | 96.7 |
| MsG0880044572.01.T01 | MTR_3g435040 | 26.697 | 442 | 267 | 15 | 35 | 442 | 618 | 1036 | 2.76e-19 | 92.8 |
| MsG0880044572.01.T01 | MTR_3g062980 | 27.389 | 314 | 179 | 8 | 215 | 522 | 58 | 328 | 5.09e-20 | 94.4 |
| MsG0880044572.01.T01 | MTR_3g062980 | 30.233 | 172 | 110 | 4 | 351 | 518 | 44 | 209 | 3.37e-14 | 75.9 |
| MsG0880044572.01.T01 | MTR_3g062990 | 31.773 | 299 | 174 | 8 | 6 | 300 | 703 | 975 | 6.29e-20 | 94.4 |
| MsG0880044572.01.T01 | MTR_3g062340 | 32.841 | 271 | 162 | 7 | 35 | 302 | 714 | 967 | 1.20e-19 | 94.0 |
| MsG0880044572.01.T01 | MTR_3g062340 | 32.704 | 159 | 96 | 4 | 370 | 522 | 1177 | 1330 | 1.35e-16 | 84.3 |
| MsG0880044572.01.T01 | MTR_3g062340 | 30.973 | 113 | 76 | 1 | 360 | 472 | 1111 | 1221 | 4.06e-13 | 73.2 |
| MsG0880044572.01.T01 | MTR_3g435040 | 27.149 | 442 | 267 | 16 | 35 | 444 | 403 | 821 | 1.46e-19 | 93.6 |
| MsG0880044572.01.T01 | MTR_3g435040 | 25.134 | 374 | 189 | 13 | 149 | 469 | 743 | 1078 | 1.25e-17 | 87.4 |
| MsG0880044572.01.T01 | MTR_3g062180 | 36.145 | 166 | 97 | 4 | 357 | 522 | 75 | 231 | 1.48e-19 | 92.8 |
| MsG0880044572.01.T01 | MTR_3g467660 | 33.333 | 168 | 102 | 4 | 360 | 522 | 125 | 287 | 3.29e-19 | 89.0 |
| MsG0880044572.01.T01 | MTR_3g466710 | 30.290 | 241 | 157 | 4 | 35 | 270 | 702 | 936 | 1.18e-18 | 90.5 |
| MsG0880044572.01.T01 | MTR_3g466750 | 27.014 | 422 | 215 | 16 | 147 | 521 | 1044 | 1419 | 1.50e-18 | 90.5 |
| MsG0880044572.01.T01 | MTR_3g466750 | 24.765 | 533 | 312 | 14 | 32 | 522 | 695 | 1180 | 3.99e-15 | 79.3 |
| MsG0880044572.01.T01 | MTR_3g048607 | 29.181 | 281 | 173 | 7 | 29 | 300 | 749 | 1012 | 1.90e-18 | 89.7 |
| MsG0880044572.01.T01 | MTR_7g026240 | 35.915 | 142 | 82 | 2 | 360 | 494 | 22 | 161 | 1.91e-18 | 87.0 |
| MsG0880044572.01.T01 | MTR_0067s0070 | 29.688 | 256 | 152 | 7 | 32 | 275 | 704 | 943 | 2.60e-18 | 89.4 |
| MsG0880044572.01.T01 | MTR_0257s0040 | 31.288 | 163 | 105 | 4 | 360 | 522 | 7 | 162 | 3.12e-18 | 83.2 |
| MsG0880044572.01.T01 | MTR_3g062010 | 29.712 | 313 | 175 | 12 | 32 | 307 | 704 | 1008 | 2.88e-17 | 86.3 |
| MsG0880044572.01.T01 | MTR_3g062230 | 24.574 | 411 | 215 | 12 | 162 | 522 | 7 | 372 | 3.09e-17 | 85.5 |
| MsG0880044572.01.T01 | MTR_3g048593 | 30.601 | 183 | 111 | 5 | 362 | 535 | 44 | 219 | 3.39e-16 | 80.1 |
| MsG0880044572.01.T01 | MTR_6g463150 | 24.262 | 474 | 287 | 16 | 95 | 542 | 1333 | 1760 | 3.97e-15 | 79.3 |
| MsG0880044572.01.T01 | MTR_3g466530 | 27.517 | 298 | 178 | 9 | 213 | 488 | 33 | 314 | 4.52e-15 | 79.0 |
| MsG0880044572.01.T01 | MTR_7g026250 | 29.832 | 238 | 141 | 6 | 32 | 266 | 682 | 896 | 4.81e-15 | 79.0 |
| MsG0880044572.01.T01 | MTR_3g048690 | 27.378 | 431 | 271 | 14 | 22 | 442 | 631 | 1029 | 6.94e-15 | 78.6 |
| MsG0880044572.01.T01 | MTR_3g464820 | 29.936 | 157 | 97 | 4 | 370 | 522 | 17 | 164 | 8.61e-15 | 73.2 |
| MsG0880044572.01.T01 | MTR_3g031750 | 27.794 | 349 | 207 | 8 | 93 | 411 | 721 | 1054 | 4.01e-14 | 76.3 |
| MsG0880044572.01.T01 | MTR_3g467340 | 26.761 | 284 | 185 | 6 | 23 | 300 | 693 | 959 | 4.34e-14 | 75.9 |
| MsG0880044572.01.T01 | MTR_3g062050 | 32.558 | 172 | 105 | 4 | 360 | 525 | 191 | 357 | 1.38e-13 | 72.8 |
| MsG0880044572.01.T01 | MTR_3g062020 | 29.218 | 243 | 145 | 6 | 30 | 269 | 554 | 772 | 2.59e-13 | 73.2 |
| MsG0880044572.01.T01 | MTR_3g436180 | 30.667 | 150 | 92 | 3 | 351 | 488 | 62 | 211 | 3.80e-13 | 71.2 |
| MsG0880044572.01.T01 | MTR_2g071860 | 22.862 | 538 | 313 | 14 | 5 | 466 | 264 | 775 | 2.26e-12 | 70.5 |
| MsG0880044572.01.T01 | MTR_1g036750 | 22.676 | 441 | 277 | 13 | 100 | 520 | 1316 | 1712 | 5.26e-12 | 69.7 |
| MsG0880044572.01.T01 | MTR_0006s0160 | 22.737 | 475 | 293 | 15 | 95 | 542 | 404 | 831 | 1.58e-11 | 67.8 |
| MsG0880044572.01.T01 | MTR_8g028500 | 23.077 | 377 | 211 | 13 | 210 | 518 | 1354 | 1719 | 3.36e-11 | 67.0 |
| MsG0880044572.01.T01 | MTR_4g027125 | 31.933 | 238 | 147 | 7 | 32 | 261 | 130 | 360 | 3.95e-11 | 65.9 |
| MsG0880044572.01.T01 | MTR_4g027255 | 31.933 | 238 | 147 | 7 | 32 | 261 | 425 | 655 | 4.06e-11 | 66.2 |
| MsG0880044572.01.T01 | MTR_3g055220 | 47.887 | 71 | 29 | 1 | 398 | 468 | 2 | 64 | 4.35e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 68 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATCAACGATGTTGAAAT+TGG | 0.179267 | 8:-44841182 | MsG0880044572.01.T01:CDS |
| TCCAAGTTTGAGAGAAATTC+AGG | 0.252004 | 8:-44841036 | MsG0880044572.01.T01:CDS |
| TTCCAAAGCTAACAGATATA+AGG | 0.263432 | 8:-44841328 | MsG0880044572.01.T01:CDS |
| ATTGGTGAGACGAATGATTT+TGG | 0.284874 | 8:+44841887 | None:intergenic |
| GGCGAGCACGTTTCTAATTC+AGG | 0.304133 | 8:-44842102 | MsG0880044572.01.T01:CDS |
| TGGAGACTCAAAATATGTTT+TGG | 0.311002 | 8:+44841521 | None:intergenic |
| CACTGGTAAATGTACTCTTT+TGG | 0.330870 | 8:+44842646 | None:intergenic |
| ATCCTTATATCTGTTAGCTT+TGG | 0.334977 | 8:+44841326 | None:intergenic |
| ATATTTCAGACTGATCTAAA+AGG | 0.345145 | 8:-44842072 | MsG0880044572.01.T01:CDS |
| ACAGATCTTGATAATCTCAT+TGG | 0.365099 | 8:-44841820 | MsG0880044572.01.T01:CDS |
| TTTACATCTCTCTGTCTTGA+GGG | 0.366546 | 8:-44842486 | MsG0880044572.01.T01:CDS |
| GCAAGTTCTTGTTCCGGTAT+TGG | 0.374401 | 8:+44841869 | None:intergenic |
| ATTCATTTGATACATCTTCA+TGG | 0.379238 | 8:-44842564 | MsG0880044572.01.T01:CDS |
| AACTTCAAATTTCTAATTGT+AGG | 0.392021 | 8:-44842020 | MsG0880044572.01.T01:CDS |
| ATGTATCAAATGAATTGTTT+CGG | 0.400689 | 8:+44842572 | None:intergenic |
| ACCTGAATTTCTCTCAAACT+TGG | 0.424610 | 8:+44841035 | None:intergenic |
| GTTGGTTGAATTAGTACTGC+TGG | 0.425408 | 8:-44842397 | MsG0880044572.01.T01:CDS |
| ATTTCAAGAGTGCTCAGCTT+TGG | 0.433104 | 8:+44841248 | None:intergenic |
| TGGAAAACACACTTCAGTAT+TGG | 0.437647 | 8:+44841346 | None:intergenic |
| GTAGAGAAAATGACCTTAAG+AGG | 0.438554 | 8:-44841584 | MsG0880044572.01.T01:CDS |
| TTACCAATATGTTGTGTTGA+AGG | 0.441105 | 8:-44841982 | MsG0880044572.01.T01:CDS |
| TGAATTAGTACTGCTGGAAA+TGG | 0.441651 | 8:-44842391 | MsG0880044572.01.T01:CDS |
| AATAGGAAAATGTTCACAAT+TGG | 0.445213 | 8:-44842693 | None:intergenic |
| AAAATAACAAACAGCATGTT+CGG | 0.448309 | 8:-44842225 | MsG0880044572.01.T01:CDS |
| TCATGGATCGCTACGTTGGC+CGG | 0.449945 | 8:-44841718 | MsG0880044572.01.T01:CDS |
| CTCATAACTTCAATCATGTC+TGG | 0.450142 | 8:+44842522 | None:intergenic |
| AGTACATTTACCAGTGTGTA+TGG | 0.450933 | 8:-44842639 | MsG0880044572.01.T01:CDS |
| ATCCATGATGCATTCAACTT+TGG | 0.451633 | 8:+44841733 | None:intergenic |
| TTGATGACGTATTCTATCTC+TGG | 0.453936 | 8:+44842459 | None:intergenic |
| GAGGATGCAAGTTCTTGTTC+CGG | 0.454950 | 8:+44841863 | None:intergenic |
| CTATCAACGATGTTGAAATT+GGG | 0.455745 | 8:-44841181 | MsG0880044572.01.T01:CDS |
| CAGATCTTGATAATCTCATT+GGG | 0.458245 | 8:-44841819 | MsG0880044572.01.T01:CDS |
| ATCATTCGTCTCACCAATAC+CGG | 0.464416 | 8:-44841882 | MsG0880044572.01.T01:CDS |
| TTGAAGCTTATAATTGCCAT+TGG | 0.465705 | 8:-44842126 | MsG0880044572.01.T01:CDS |
| AGTCCTTCAACACAACATAT+TGG | 0.473462 | 8:+44841979 | None:intergenic |
| AGTACTAATTCAACCAACTT+AGG | 0.495508 | 8:+44842402 | None:intergenic |
| TGTTGAAGGACTGGCACCAC+TGG | 0.508683 | 8:-44841968 | MsG0880044572.01.T01:CDS |
| AAGCTTATAATTGCCATTGG+AGG | 0.516622 | 8:-44842123 | MsG0880044572.01.T01:CDS |
| TAATCATAGCAACAGAGAAA+AGG | 0.518144 | 8:+44841279 | None:intergenic |
| AGTTTGATACGTTTCAAATG+AGG | 0.518203 | 8:+44841844 | None:intergenic |
| GATGACAAGTTTACGAGAAG+AGG | 0.528014 | 8:+44841005 | None:intergenic |
| TTCTTCTAGTTGAGTGACCT+CGG | 0.537839 | 8:+44841223 | None:intergenic |
| TACTTCTCTATCCTCAGAGC+CGG | 0.538182 | 8:+44841699 | None:intergenic |
| CTGCTAAACTTTGAAGACAA+TGG | 0.538188 | 8:+44841501 | None:intergenic |
| GTCCAAAGTTGAATGCATCA+TGG | 0.544215 | 8:-44841735 | MsG0880044572.01.T01:CDS |
| CGCTACGTTGGCCGGCTCTG+AGG | 0.547997 | 8:-44841710 | MsG0880044572.01.T01:CDS |
| ATTATTTGTATCTCTTCCAG+TGG | 0.552305 | 8:+44841952 | None:intergenic |
| AAGGACCTACTCTTGATATG+AGG | 0.559310 | 8:+44841546 | None:intergenic |
| GTTACACAACATATTTCCAC+AGG | 0.563140 | 8:-44842277 | MsG0880044572.01.T01:CDS |
| AGAAACGTGCTCGCCTCCAA+TGG | 0.569883 | 8:+44842110 | None:intergenic |
| AAATTGGCCGTCTTCGACAG+TGG | 0.570419 | 8:-44841773 | MsG0880044572.01.T01:CDS |
| GTCTTCGACAGTGGTAATTG+TGG | 0.573418 | 8:-44841764 | MsG0880044572.01.T01:CDS |
| ACTCGAAACGATGTCAACTC+TGG | 0.580869 | 8:+44841422 | None:intergenic |
| AATCTTAGAACTTGATGAGG+TGG | 0.582357 | 8:+44842342 | None:intergenic |
| CAATACAACCTCCGATTCTG+AGG | 0.590601 | 8:-44842439 | MsG0880044572.01.T01:CDS |
| TGCATCATGGATCGCTACGT+TGG | 0.607500 | 8:-44841722 | MsG0880044572.01.T01:CDS |
| AATATGTTGTGTTGAAGGAC+TGG | 0.617803 | 8:-44841977 | MsG0880044572.01.T01:CDS |
| ACAATTACCACTGTCGAAGA+CGG | 0.618499 | 8:+44841766 | None:intergenic |
| TTGAGCCTCATATCAAGAGT+AGG | 0.620868 | 8:-44841551 | MsG0880044572.01.T01:CDS |
| AAGAATCTTAGAACTTGATG+AGG | 0.633150 | 8:+44842339 | None:intergenic |
| AACTTGCAAGAGCTGTGTCG+TGG | 0.641664 | 8:-44842366 | MsG0880044572.01.T01:CDS |
| AAACTCGACCTCAGAATCGG+AGG | 0.648298 | 8:+44842431 | None:intergenic |
| GACATGATTGAAGTTATGAG+AGG | 0.648887 | 8:-44842519 | MsG0880044572.01.T01:CDS |
| TCAAATACAAGTTTCAACTG+AGG | 0.659682 | 8:+44841922 | None:intergenic |
| CATTTGATACATCTTCATGG+AGG | 0.663365 | 8:-44842561 | MsG0880044572.01.T01:CDS |
| AGTATAATGTCCATACACAC+TGG | 0.670852 | 8:+44842629 | None:intergenic |
| GAGCACTCTTGAAATATCCG+AGG | 0.680309 | 8:-44841240 | MsG0880044572.01.T01:CDS |
| TTGCAGATATCAACAAAACA+TGG | 0.689675 | 8:+44841122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAACAAAAATATAAAAA+AGG | + | Chr8:44842005-44842024 | None:intergenic | 10.0% |
| !! | TCAAACAAAAATATAAAAAA+GGG | + | Chr8:44842004-44842023 | None:intergenic | 10.0% |
| !!! | AATTTTCACAATTTTTTTCA+GGG | + | Chr8:44841885-44841904 | None:intergenic | 15.0% |
| !! | AACTTCAAATTTCTAATTGT+AGG | - | Chr8:44841653-44841672 | MsG0880044572.01.T01:intron | 20.0% |
| !! | ATGTATCAAATGAATTGTTT+CGG | + | Chr8:44841104-44841123 | None:intergenic | 20.0% |
| !! | CTGAAAAAAATTGTGAAAAT+TGG | - | Chr8:44841884-44841903 | MsG0880044572.01.T01:CDS | 20.0% |
| !! | TAAAAAGAATCTTCTTCAAA+TGG | - | Chr8:44841078-44841097 | MsG0880044572.01.T01:CDS | 20.0% |
| !!! | CAATTTTCACAATTTTTTTC+AGG | + | Chr8:44841886-44841905 | None:intergenic | 20.0% |
| ! | AAAATAACAAACAGCATGTT+CGG | - | Chr8:44841448-44841467 | MsG0880044572.01.T01:CDS | 25.0% |
| ! | ATATTTCAGACTGATCTAAA+AGG | - | Chr8:44841601-44841620 | MsG0880044572.01.T01:intron | 25.0% |
| ! | ATTCATTTGATACATCTTCA+TGG | - | Chr8:44841109-44841128 | MsG0880044572.01.T01:CDS | 25.0% |
| !! | AACTTTCTGAAAAAGGAATT+TGG | + | Chr8:44842063-44842082 | None:intergenic | 25.0% |
| !! | CAACTAGAAGAAGTTTTTAA+GGG | - | Chr8:44842461-44842480 | MsG0880044572.01.T01:CDS | 25.0% |
| !! | TCAACTAGAAGAAGTTTTTA+AGG | - | Chr8:44842460-44842479 | MsG0880044572.01.T01:CDS | 25.0% |
| AAGAATCTTAGAACTTGATG+AGG | + | Chr8:44841337-44841356 | None:intergenic | 30.0% | |
| ACTATCAACGATGTTGAAAT+TGG | - | Chr8:44842491-44842510 | MsG0880044572.01.T01:CDS | 30.0% | |
| AGTACTAATTCAACCAACTT+AGG | + | Chr8:44841274-44841293 | None:intergenic | 30.0% | |
| AGTTTGATACGTTTCAAATG+AGG | + | Chr8:44841832-44841851 | None:intergenic | 30.0% | |
| ATTATTTGTATCTCTTCCAG+TGG | + | Chr8:44841724-44841743 | None:intergenic | 30.0% | |
| CAATTCAGAAAAACCTCTTA+AGG | + | Chr8:44842105-44842124 | None:intergenic | 30.0% | |
| CTATCAACGATGTTGAAATT+GGG | - | Chr8:44842492-44842511 | MsG0880044572.01.T01:CDS | 30.0% | |
| TAATCATAGCAACAGAGAAA+AGG | + | Chr8:44842397-44842416 | None:intergenic | 30.0% | |
| TCAAATACAAGTTTCAACTG+AGG | + | Chr8:44841754-44841773 | None:intergenic | 30.0% | |
| TTACCAATATGTTGTGTTGA+AGG | - | Chr8:44841691-44841710 | MsG0880044572.01.T01:intron | 30.0% | |
| TTCCAAAGCTAACAGATATA+AGG | - | Chr8:44842345-44842364 | MsG0880044572.01.T01:CDS | 30.0% | |
| TTGAAGCTTATAATTGCCAT+TGG | - | Chr8:44841547-44841566 | MsG0880044572.01.T01:CDS | 30.0% | |
| TTGCAGATATCAACAAAACA+TGG | + | Chr8:44842554-44842573 | None:intergenic | 30.0% | |
| ! | ACAGATCTTGATAATCTCAT+TGG | - | Chr8:44841853-44841872 | MsG0880044572.01.T01:CDS | 30.0% |
| ! | ATCCTTATATCTGTTAGCTT+TGG | + | Chr8:44842350-44842369 | None:intergenic | 30.0% |
| ! | CAGATCTTGATAATCTCATT+GGG | - | Chr8:44841854-44841873 | MsG0880044572.01.T01:CDS | 30.0% |
| ! | CCTTGAAAACTTTCTGAAAA+AGG | + | Chr8:44842070-44842089 | None:intergenic | 30.0% |
| ! | CTCAAACTTGGAGAAATTTT+AGG | + | Chr8:44842629-44842648 | None:intergenic | 30.0% |
| ! | TGGAGACTCAAAATATGTTT+TGG | + | Chr8:44842155-44842174 | None:intergenic | 30.0% |
| ! | TTTTGTAAGTTACATTCCTG+TGG | + | Chr8:44841415-44841434 | None:intergenic | 30.0% |
| !! | TGTTTTGTTGATATCTGCAA+AGG | - | Chr8:44842554-44842573 | MsG0880044572.01.T01:CDS | 30.0% |
| !!! | ACATGCTGTTTGTTATTTTG+AGG | + | Chr8:44841447-44841466 | None:intergenic | 30.0% |
| !!! | CCTTTTTCAGAAAGTTTTCA+AGG | - | Chr8:44842067-44842086 | MsG0880044572.01.T01:CDS | 30.0% |
| !!! | CTCAAAATATGTTTTGGAGA+AGG | + | Chr8:44842149-44842168 | None:intergenic | 30.0% |
| AAGCTTATAATTGCCATTGG+AGG | - | Chr8:44841550-44841569 | MsG0880044572.01.T01:CDS | 35.0% | |
| AATATGTTGTGTTGAAGGAC+TGG | - | Chr8:44841696-44841715 | MsG0880044572.01.T01:intron | 35.0% | |
| AATCTTAGAACTTGATGAGG+TGG | + | Chr8:44841334-44841353 | None:intergenic | 35.0% | |
| ACCTGAATTTCTCTCAAACT+TGG | + | Chr8:44842641-44842660 | None:intergenic | 35.0% | |
| AGTACATTTACCAGTGTGTA+TGG | - | Chr8:44841034-44841053 | MsG0880044572.01.T01:CDS | 35.0% | |
| AGTATAATGTCCATACACAC+TGG | + | Chr8:44841047-44841066 | None:intergenic | 35.0% | |
| AGTCCTTCAACACAACATAT+TGG | + | Chr8:44841697-44841716 | None:intergenic | 35.0% | |
| ATCCATGATGCATTCAACTT+TGG | + | Chr8:44841943-44841962 | None:intergenic | 35.0% | |
| CATTTGATACATCTTCATGG+AGG | - | Chr8:44841112-44841131 | MsG0880044572.01.T01:CDS | 35.0% | |
| CTCATAACTTCAATCATGTC+TGG | + | Chr8:44841154-44841173 | None:intergenic | 35.0% | |
| GACATGATTGAAGTTATGAG+AGG | - | Chr8:44841154-44841173 | MsG0880044572.01.T01:CDS | 35.0% | |
| GTAGAGAAAATGACCTTAAG+AGG | - | Chr8:44842089-44842108 | MsG0880044572.01.T01:CDS | 35.0% | |
| GTTACACAACATATTTCCAC+AGG | - | Chr8:44841396-44841415 | MsG0880044572.01.T01:CDS | 35.0% | |
| TCCAAGTTTGAGAGAAATTC+AGG | - | Chr8:44842637-44842656 | MsG0880044572.01.T01:CDS | 35.0% | |
| TGAATTAGTACTGCTGGAAA+TGG | - | Chr8:44841282-44841301 | MsG0880044572.01.T01:CDS | 35.0% | |
| TGGAAAACACACTTCAGTAT+TGG | + | Chr8:44842330-44842349 | None:intergenic | 35.0% | |
| TTTACATCTCTCTGTCTTGA+GGG | - | Chr8:44841187-44841206 | MsG0880044572.01.T01:CDS | 35.0% | |
| ! | ATTGGTGAGACGAATGATTT+TGG | + | Chr8:44841789-44841808 | None:intergenic | 35.0% |
| ! | CACTGGTAAATGTACTCTTT+TGG | + | Chr8:44841030-44841049 | None:intergenic | 35.0% |
| ! | CTGCTAAACTTTGAAGACAA+TGG | + | Chr8:44842175-44842194 | None:intergenic | 35.0% |
| ! | TTTTACATCTCTCTGTCTTG+AGG | - | Chr8:44841186-44841205 | MsG0880044572.01.T01:CDS | 35.0% |
| !! | TTGATGACGTATTCTATCTC+TGG | + | Chr8:44841217-44841236 | None:intergenic | 35.0% |
| !!! | TCTGCAAAGGTTTTAAGCTA+CGG | - | Chr8:44842567-44842586 | MsG0880044572.01.T01:CDS | 35.0% |
| AAGGACCTACTCTTGATATG+AGG | + | Chr8:44842130-44842149 | None:intergenic | 40.0% | |
| ACAATTACCACTGTCGAAGA+CGG | + | Chr8:44841910-44841929 | None:intergenic | 40.0% | |
| ATCATTCGTCTCACCAATAC+CGG | - | Chr8:44841791-44841810 | MsG0880044572.01.T01:CDS | 40.0% | |
| CAAAAACTCGACCTCAGAAT+CGG | + | Chr8:44841248-44841267 | None:intergenic | 40.0% | |
| GATGACAAGTTTACGAGAAG+AGG | + | Chr8:44842671-44842690 | None:intergenic | 40.0% | |
| GTCCAAAGTTGAATGCATCA+TGG | - | Chr8:44841938-44841957 | MsG0880044572.01.T01:CDS | 40.0% | |
| GTTGGTTGAATTAGTACTGC+TGG | - | Chr8:44841276-44841295 | MsG0880044572.01.T01:CDS | 40.0% | |
| TTGAGCCTCATATCAAGAGT+AGG | - | Chr8:44842122-44842141 | MsG0880044572.01.T01:CDS | 40.0% | |
| ! | TTCTTCTAGTTGAGTGACCT+CGG | + | Chr8:44842453-44842472 | None:intergenic | 40.0% |
| !! | ATTTCAAGAGTGCTCAGCTT+TGG | + | Chr8:44842428-44842447 | None:intergenic | 40.0% |
| !!! | CGAGTTTTTGGTTCCTAAGT+TGG | - | Chr8:44841258-44841277 | MsG0880044572.01.T01:CDS | 40.0% |
| ACTCGAAACGATGTCAACTC+TGG | + | Chr8:44842254-44842273 | None:intergenic | 45.0% | |
| CAATACAACCTCCGATTCTG+AGG | - | Chr8:44841234-44841253 | MsG0880044572.01.T01:CDS | 45.0% | |
| GAGCACTCTTGAAATATCCG+AGG | - | Chr8:44842433-44842452 | MsG0880044572.01.T01:CDS | 45.0% | |
| GAGGATGCAAGTTCTTGTTC+CGG | + | Chr8:44841813-44841832 | None:intergenic | 45.0% | |
| GCAAGTTCTTGTTCCGGTAT+TGG | + | Chr8:44841807-44841826 | None:intergenic | 45.0% | |
| GTCTTCGACAGTGGTAATTG+TGG | - | Chr8:44841909-44841928 | MsG0880044572.01.T01:CDS | 45.0% | |
| TACTTCTCTATCCTCAGAGC+CGG | + | Chr8:44841977-44841996 | None:intergenic | 45.0% | |
| !!! | CGATTCTGAGGTCGAGTTTT+TGG | - | Chr8:44841246-44841265 | MsG0880044572.01.T01:CDS | 45.0% |
| AAACTCGACCTCAGAATCGG+AGG | + | Chr8:44841245-44841264 | None:intergenic | 50.0% | |
| AAATTGGCCGTCTTCGACAG+TGG | - | Chr8:44841900-44841919 | MsG0880044572.01.T01:CDS | 50.0% | |
| AACTTGCAAGAGCTGTGTCG+TGG | - | Chr8:44841307-44841326 | MsG0880044572.01.T01:CDS | 50.0% | |
| GGCGAGCACGTTTCTAATTC+AGG | - | Chr8:44841571-44841590 | MsG0880044572.01.T01:CDS | 50.0% | |
| TGCATCATGGATCGCTACGT+TGG | - | Chr8:44841951-44841970 | MsG0880044572.01.T01:CDS | 50.0% | |
| AGAAACGTGCTCGCCTCCAA+TGG | + | Chr8:44841566-44841585 | None:intergenic | 55.0% | |
| TCATGGATCGCTACGTTGGC+CGG | - | Chr8:44841955-44841974 | MsG0880044572.01.T01:CDS | 55.0% | |
| ! | TGTTGAAGGACTGGCACCAC+TGG | - | Chr8:44841705-44841724 | MsG0880044572.01.T01:CDS | 55.0% |
| ! | CGCTACGTTGGCCGGCTCTG+AGG | - | Chr8:44841963-44841982 | MsG0880044572.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 44840989 | 44842706 | 44840989 | ID=MsG0880044572.01;Name=MsG0880044572.01 |
| Chr8 | mRNA | 44840989 | 44842706 | 44840989 | ID=MsG0880044572.01.T01;Parent=MsG0880044572.01;Name=MsG0880044572.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|2|0|544 |
| Chr8 | exon | 44841702 | 44842706 | 44841702 | ID=MsG0880044572.01.T01:exon:8136;Parent=MsG0880044572.01.T01 |
| Chr8 | exon | 44840989 | 44841618 | 44840989 | ID=MsG0880044572.01.T01:exon:8135;Parent=MsG0880044572.01.T01 |
| Chr8 | CDS | 44841702 | 44842706 | 44841702 | ID=MsG0880044572.01.T01:cds;Parent=MsG0880044572.01.T01 |
| Chr8 | CDS | 44840989 | 44841618 | 44840989 | ID=MsG0880044572.01.T01:cds;Parent=MsG0880044572.01.T01 |
| Gene Sequence |
| Protein sequence |
