AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014727.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014727.01.T01 MTR_3g462930 87.434 565 25 1 2 566 273 791 0.0 959
MsG0380014727.01.T01 MTR_5g069780 79.676 556 66 2 2 556 281 790 0.0 849
MsG0380014727.01.T01 MTR_3g115110 46.304 514 215 10 20 528 235 692 2.91e-123 379
MsG0380014727.01.T01 MTR_7g010800 43.513 501 225 9 33 532 206 649 1.42e-119 368
MsG0380014727.01.T01 MTR_4g094662 43.912 501 223 9 33 532 229 672 1.00e-117 364
MsG0380014727.01.T01 MTR_2g438140 42.802 521 239 10 33 552 226 688 3.05e-117 363
MsG0380014727.01.T01 MTR_2g438140 48.157 407 154 8 33 438 286 636 3.91e-110 343
MsG0380014727.01.T01 MTR_6g059690 39.600 500 242 6 33 532 197 636 4.63e-110 344
MsG0380014727.01.T01 MTR_7g078570 38.911 496 243 6 33 528 192 627 1.50e-106 333
MsG0380014727.01.T01 MTR_4g064350 39.920 501 237 7 33 532 320 757 6.94e-106 336
MsG0380014727.01.T01 MTR_7g096060 39.155 521 247 9 33 552 240 691 1.01e-105 333
MsG0380014727.01.T01 MTR_3g104470 40.519 501 227 10 31 529 221 652 1.20e-99 317
MsG0380014727.01.T01 MTR_3g104480 40.039 507 233 10 31 535 219 656 1.75e-98 314
MsG0380014727.01.T01 MTR_1g028390 38.124 501 232 9 34 532 330 754 5.45e-94 304
MsG0380014727.01.T01 MTR_0376s0020 36.492 496 240 9 33 528 1 421 1.14e-89 287
MsG0380014727.01.T01 MTR_5g075340 39.173 508 237 10 31 535 226 664 4.58e-89 293
MsG0380014727.01.T01 MTR_5g075360 36.381 525 253 11 31 545 13 466 6.33e-89 283
MsG0380014727.01.T01 MTR_5g075360 37.081 507 243 10 31 532 63 498 1.08e-88 283
MsG0380014727.01.T01 MTR_5g075360 36.381 525 253 11 31 545 189 642 2.61e-87 283
MsG0380014727.01.T01 MTR_5g075360 37.081 507 243 10 31 532 239 674 3.88e-87 284
MsG0380014727.01.T01 MTR_8g099605 33.396 530 257 11 33 528 163 630 1.07e-78 261
MsG0380014727.01.T01 MTR_6g016600 47.468 316 112 4 19 332 303 566 1.54e-77 256
MsG0380014727.01.T01 MTR_8g099605 32.394 568 288 11 33 566 404 909 1.74e-77 263
MsG0380014727.01.T01 MTR_1g044600 36.321 424 180 6 33 456 165 498 3.63e-76 250
MsG0380014727.01.T01 MTR_2g101290 35.867 513 247 12 28 534 410 846 5.03e-71 244
MsG0380014727.01.T01 MTR_2g101290 42.222 360 152 6 28 386 410 714 1.01e-69 238
MsG0380014727.01.T01 MTR_3g096000 40.000 350 156 5 26 369 289 590 5.06e-63 222
MsG0380014727.01.T01 MTR_5g074850 36.175 434 201 14 35 456 500 869 1.24e-58 211
MsG0380014727.01.T01 MTR_3g104490 56.442 163 63 2 32 192 206 362 4.48e-52 189
MsG0380014727.01.T01 MTR_3g104490 30.282 284 178 6 253 535 355 619 5.33e-24 107
MsG0380014727.01.T01 MTR_8g469460 56.442 163 63 2 32 192 206 362 1.14e-51 188
MsG0380014727.01.T01 MTR_8g469460 30.970 268 167 5 274 540 366 616 5.10e-24 107
MsG0380014727.01.T01 MTR_4g094270 34.667 300 143 5 34 332 157 404 6.41e-46 167
MsG0380014727.01.T01 MTR_3g062510 37.716 289 126 6 33 318 159 396 6.80e-46 167
MsG0380014727.01.T01 MTR_1g063380 36.644 292 130 5 25 314 197 435 2.58e-45 171
MsG0380014727.01.T01 MTR_1g063380 31.790 324 157 7 32 351 477 740 1.86e-42 163
MsG0380014727.01.T01 MTR_3g062510 51.445 173 78 3 33 202 159 328 4.17e-45 164
MsG0380014727.01.T01 MTR_7g099640 35.759 316 149 6 12 324 166 430 1.19e-44 164
MsG0380014727.01.T01 MTR_8g056860 26.654 544 287 13 48 549 485 958 1.58e-44 170
MsG0380014727.01.T01 MTR_1g069105 35.443 316 150 6 12 324 167 431 1.87e-44 164
MsG0380014727.01.T01 MTR_7g101870 36.934 287 128 5 29 314 202 436 1.98e-44 169
MsG0380014727.01.T01 MTR_7g101870 31.900 279 140 4 32 309 478 707 4.71e-41 159
MsG0380014727.01.T01 MTR_2g095210 31.613 310 159 5 1 309 377 634 1.21e-43 166
MsG0380014727.01.T01 MTR_2g095210 37.624 101 58 2 28 127 202 298 1.27e-11 67.8
MsG0380014727.01.T01 MTR_7g099640 35.762 302 140 6 12 310 166 416 6.10e-43 159
MsG0380014727.01.T01 MTR_1g083330 34.812 293 139 6 32 322 166 408 8.85e-43 159
MsG0380014727.01.T01 MTR_4g033235 34.812 293 139 6 32 322 167 409 9.02e-43 159
MsG0380014727.01.T01 MTR_3g117230 33.221 298 141 6 32 324 138 382 1.61e-42 157
MsG0380014727.01.T01 MTR_3g112260 33.221 298 141 6 32 324 135 379 2.25e-42 157
MsG0380014727.01.T01 MTR_1g095660 32.803 314 155 6 28 334 113 377 3.79e-42 156
MsG0380014727.01.T01 MTR_2g095320 35.052 291 132 5 25 314 145 379 6.85e-42 160
MsG0380014727.01.T01 MTR_2g095320 36.269 193 117 3 1 192 393 580 3.16e-34 138
MsG0380014727.01.T01 MTR_7g088850 38.489 278 121 5 33 309 282 510 7.20e-42 159
MsG0380014727.01.T01 MTR_7g088850 26.667 285 141 9 52 323 29 258 4.09e-13 72.4
MsG0380014727.01.T01 MTR_7g089040 34.295 312 148 6 33 337 685 946 9.54e-40 155
MsG0380014727.01.T01 MTR_7g089040 33.708 267 123 6 44 308 395 609 1.12e-27 119
MsG0380014727.01.T01 MTR_1g069105 43.814 194 103 3 12 202 167 357 1.11e-39 149
MsG0380014727.01.T01 MTR_2g007010 38.909 275 112 5 35 305 240 462 1.06e-38 152
MsG0380014727.01.T01 MTR_2g007010 42.529 174 95 2 32 204 527 696 8.30e-32 131
MsG0380014727.01.T01 MTR_3g023900 36.213 301 131 5 14 305 217 465 3.79e-38 150
MsG0380014727.01.T01 MTR_3g023900 32.130 277 147 7 33 305 531 770 1.28e-26 115
MsG0380014727.01.T01 MTR_7g088830 31.677 322 160 7 33 347 658 926 1.18e-37 149
MsG0380014727.01.T01 MTR_7g088830 31.599 269 127 9 44 310 405 618 6.54e-23 103
MsG0380014727.01.T01 MTR_7g088980 37.367 281 120 6 33 309 136 364 2.14e-37 143
MsG0380014727.01.T01 MTR_7g088980 37.367 281 120 6 33 309 218 446 7.16e-37 143
MsG0380014727.01.T01 MTR_7g088980 37.367 281 120 6 33 309 312 540 9.63e-37 144
MsG0380014727.01.T01 MTR_7g088980 39.130 138 72 4 69 199 80 212 6.24e-16 81.3
MsG0380014727.01.T01 MTR_7g088980 37.367 281 120 6 33 309 286 514 1.28e-36 144
MsG0380014727.01.T01 MTR_7g088980 35.233 193 102 7 18 199 6 186 2.27e-18 89.0
MsG0380014727.01.T01 MTR_1g080430 41.765 170 97 2 33 201 677 845 2.50e-35 142
MsG0380014727.01.T01 MTR_1g080430 41.765 170 97 2 33 201 677 845 3.67e-35 141
MsG0380014727.01.T01 MTR_8g023550 30.519 308 149 6 28 334 160 403 6.62e-35 136
MsG0380014727.01.T01 MTR_4g067100 34.202 307 142 7 8 308 358 610 7.82e-35 140
MsG0380014727.01.T01 MTR_4g067100 34.202 307 142 7 8 308 358 610 8.57e-35 140
MsG0380014727.01.T01 MTR_3g023890 34.155 284 125 5 31 305 90 320 5.92e-34 137
MsG0380014727.01.T01 MTR_3g023890 34.173 278 142 7 33 305 385 626 1.10e-29 124
MsG0380014727.01.T01 MTR_6g033740 35.125 279 124 6 33 308 500 724 1.02e-33 137
MsG0380014727.01.T01 MTR_8g099065 33.333 279 130 6 33 308 534 759 4.98e-33 135
MsG0380014727.01.T01 MTR_7g089290 31.973 294 147 7 18 308 624 867 7.30e-33 134
MsG0380014727.01.T01 MTR_7g089290 31.973 294 147 7 18 308 652 895 7.43e-33 134
MsG0380014727.01.T01 MTR_2g078630 31.650 297 142 7 19 309 56 297 7.75e-33 135
MsG0380014727.01.T01 MTR_2g078630 32.852 277 129 6 35 305 596 821 4.39e-32 132
MsG0380014727.01.T01 MTR_1g099470 34.420 276 118 8 33 302 434 652 1.78e-31 130
MsG0380014727.01.T01 MTR_5g009840 32.975 279 131 6 33 308 516 741 2.63e-31 129
MsG0380014727.01.T01 MTR_1g099480 33.942 274 123 8 33 302 468 687 4.78e-30 125
MsG0380014727.01.T01 MTR_1g101870 33.214 280 129 7 33 308 557 782 1.15e-29 124
MsG0380014727.01.T01 MTR_1g101870 33.214 280 129 7 33 308 505 730 1.16e-29 124
MsG0380014727.01.T01 MTR_6g023875 32.979 282 127 11 28 303 377 602 2.52e-29 123
MsG0380014727.01.T01 MTR_3g089100 34.672 274 122 8 33 302 931 1151 2.80e-29 124
MsG0380014727.01.T01 MTR_3g089100 34.672 274 122 8 33 302 902 1122 2.81e-29 124
MsG0380014727.01.T01 MTR_3g089100 34.672 274 122 8 33 302 897 1117 3.07e-29 124
MsG0380014727.01.T01 MTR_6g023855 31.317 281 132 10 29 303 242 467 1.03e-28 120
MsG0380014727.01.T01 MTR_1g088730 33.571 280 129 8 33 308 932 1158 2.90e-28 120
MsG0380014727.01.T01 MTR_8g099065 40.936 171 93 4 33 200 534 699 1.14e-27 118
MsG0380014727.01.T01 MTR_1g088750 32.857 280 131 7 33 308 938 1164 1.71e-27 118
MsG0380014727.01.T01 MTR_1g088750 32.857 280 131 7 33 308 889 1115 1.73e-27 118
MsG0380014727.01.T01 MTR_2g086160 32.852 277 117 9 32 299 131 347 1.06e-26 111
MsG0380014727.01.T01 MTR_4g053350 31.034 290 133 8 32 313 126 356 1.58e-26 112
MsG0380014727.01.T01 MTR_4g053350 31.034 290 133 8 32 313 126 356 1.71e-26 112
MsG0380014727.01.T01 MTR_1g099480 43.023 172 89 6 33 200 468 634 1.90e-26 114
MsG0380014727.01.T01 MTR_2g086160 31.615 291 130 9 32 313 131 361 2.18e-26 112
MsG0380014727.01.T01 MTR_7g075520 40.000 170 94 4 28 194 207 371 3.15e-25 109
MsG0380014727.01.T01 MTR_4g011810 30.029 343 167 12 33 357 242 529 5.94e-24 105
MsG0380014727.01.T01 MTR_3g104475 31.419 296 171 8 240 535 194 457 2.33e-23 103
MsG0380014727.01.T01 MTR_6g023865 29.492 295 144 11 23 303 148 392 4.28e-23 102
MsG0380014727.01.T01 MTR_3g092070 31.010 287 126 10 33 308 81 306 9.32e-23 100
MsG0380014727.01.T01 MTR_4g088885 30.769 260 119 7 58 305 249 459 2.44e-22 102
MsG0380014727.01.T01 MTR_3g092070 30.526 285 130 9 33 308 81 306 4.54e-22 99.0
MsG0380014727.01.T01 MTR_3g092080 30.175 285 131 9 33 308 84 309 9.00e-22 97.4
MsG0380014727.01.T01 MTR_3g115110 65.333 75 25 1 20 93 235 309 9.70e-22 99.0
MsG0380014727.01.T01 MTR_3g115110 33.838 198 117 7 338 528 295 485 1.12e-15 80.1
MsG0380014727.01.T01 MTR_3g092080 30.175 285 131 9 33 308 84 309 1.01e-21 97.8
MsG0380014727.01.T01 MTR_4g096870 38.418 177 102 5 32 206 118 289 1.02e-20 95.1
MsG0380014727.01.T01 MTR_4g074920 37.654 162 82 5 33 184 669 821 3.32e-20 95.5
MsG0380014727.01.T01 MTR_7g088980 30.935 278 99 6 33 309 312 497 4.18e-20 94.4
MsG0380014727.01.T01 MTR_7g088980 39.130 138 72 4 69 199 80 212 4.87e-16 81.6
MsG0380014727.01.T01 MTR_7g088980 30.935 278 99 6 33 309 286 471 5.73e-20 93.6
MsG0380014727.01.T01 MTR_7g088980 35.233 193 102 7 18 199 6 186 1.55e-18 89.4
MsG0380014727.01.T01 MTR_8g469440 62.500 64 24 0 35 98 209 272 1.99e-19 89.7
MsG0380014727.01.T01 MTR_8g107160 29.661 236 133 6 294 528 103 306 5.73e-19 89.7
MsG0380014727.01.T01 MTR_2g024440 33.880 183 99 6 33 202 214 387 1.35e-18 89.4
MsG0380014727.01.T01 MTR_2g024440 33.163 196 109 6 33 215 296 482 1.95e-18 89.4
MsG0380014727.01.T01 MTR_2g024440 33.163 196 109 6 33 215 297 483 1.96e-18 89.4
MsG0380014727.01.T01 MTR_5g075370 31.780 236 116 7 276 509 510 702 2.15e-17 86.3
MsG0380014727.01.T01 MTR_4g112600 49.351 77 37 2 37 111 4 80 6.80e-15 70.5
MsG0380014727.01.T01 MTR_2g076970 27.700 213 126 7 11 211 175 371 6.29e-12 68.6
MsG0380014727.01.T01 MTR_6g023845 26.354 277 115 11 33 303 116 309 1.46e-11 66.6
MsG0380014727.01.T01 MTR_8g076920 30.481 187 113 6 33 214 222 396 5.68e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014727.01.T01 AT5G58870 75.269 558 90 3 2 558 294 804 0.0 798
MsG0380014727.01.T01 AT3G47060 75.627 558 88 3 2 558 290 800 0.0 791
MsG0380014727.01.T01 AT1G50250 46.304 514 215 10 20 528 245 702 3.58e-122 376
MsG0380014727.01.T01 AT2G30950 44.511 501 219 10 33 532 224 666 1.28e-119 369
MsG0380014727.01.T01 AT2G30950 44.511 501 219 10 33 532 224 666 1.28e-119 369
MsG0380014727.01.T01 AT2G30950 44.511 501 219 10 33 532 224 666 1.28e-119 369
MsG0380014727.01.T01 AT2G30950 44.511 501 219 10 33 532 228 670 1.80e-119 369
MsG0380014727.01.T01 AT1G06430 44.711 501 218 10 33 532 217 659 1.92e-119 368
MsG0380014727.01.T01 AT1G06430 44.711 501 218 10 33 532 217 659 1.92e-119 368
MsG0380014727.01.T01 AT1G06430 44.711 501 218 10 33 532 217 659 1.92e-119 368
MsG0380014727.01.T01 AT5G42270 45.720 514 218 10 20 528 233 690 1.20e-118 367
MsG0380014727.01.T01 AT5G15250 42.914 501 228 9 33 532 221 664 2.10e-113 353
MsG0380014727.01.T01 AT1G07510 39.122 501 241 7 33 532 324 761 5.94e-102 326
MsG0380014727.01.T01 AT2G29080 38.269 520 258 8 14 532 300 757 7.32e-102 326
MsG0380014727.01.T01 AT5G15250 53.271 321 123 7 33 353 221 514 5.32e-98 307
MsG0380014727.01.T01 AT5G53170 38.446 502 229 10 34 532 360 784 1.57e-96 312
MsG0380014727.01.T01 AT2G26140 38.976 508 240 10 32 538 223 661 3.52e-96 308
MsG0380014727.01.T01 AT4G23940 36.226 530 242 10 33 528 427 894 1.15e-84 283
MsG0380014727.01.T01 AT3G02450 44.715 369 133 6 19 383 317 618 6.31e-82 268
MsG0380014727.01.T01 AT3G16290 37.650 417 199 9 7 419 382 741 6.60e-68 236
MsG0380014727.01.T01 AT5G64580 39.368 348 155 5 26 367 306 603 1.41e-60 215
MsG0380014727.01.T01 AT1G79560 27.768 587 298 18 20 561 483 988 3.66e-48 181
MsG0380014727.01.T01 AT1G79560 27.478 575 293 17 20 549 483 978 5.35e-47 177
MsG0380014727.01.T01 AT5G19990 34.426 305 151 4 34 337 101 357 3.98e-46 166
MsG0380014727.01.T01 AT5G58290 38.062 289 125 6 33 318 152 389 4.81e-46 167
MsG0380014727.01.T01 AT1G53780 34.951 309 149 6 28 334 331 589 5.56e-46 171
MsG0380014727.01.T01 AT1G53780 34.951 309 149 6 28 334 332 590 5.58e-46 171
MsG0380014727.01.T01 AT1G53780 34.951 309 149 6 28 334 332 590 5.58e-46 171
MsG0380014727.01.T01 AT2G20140 36.076 316 148 6 12 324 164 428 5.70e-46 168
MsG0380014727.01.T01 AT1G53780 34.951 309 149 6 28 334 353 611 6.49e-46 171
MsG0380014727.01.T01 AT1G53750 34.091 308 153 5 28 334 160 418 6.69e-46 167
MsG0380014727.01.T01 AT5G19990 34.426 305 151 4 34 337 159 415 1.44e-45 166
MsG0380014727.01.T01 AT5G19990 34.426 305 151 4 34 337 159 415 1.44e-45 166
MsG0380014727.01.T01 AT1G79560 28.008 532 264 16 48 534 505 962 1.52e-45 173
MsG0380014727.01.T01 AT3G09840 36.986 292 129 5 25 314 196 434 1.52e-45 172
MsG0380014727.01.T01 AT3G09840 32.616 279 139 3 32 309 476 706 8.17e-44 167
MsG0380014727.01.T01 AT5G20000 34.426 305 151 4 34 337 159 415 1.67e-45 166
MsG0380014727.01.T01 AT5G03340 36.986 292 129 5 25 314 196 434 1.87e-45 172
MsG0380014727.01.T01 AT5G03340 32.258 279 139 4 32 309 476 705 8.93e-41 158
MsG0380014727.01.T01 AT3G56690 36.120 299 138 6 33 330 721 967 4.03e-45 172
MsG0380014727.01.T01 AT3G56690 28.622 283 149 5 28 308 375 606 1.25e-25 112
MsG0380014727.01.T01 AT4G29040 35.759 316 149 6 12 324 164 428 6.50e-45 165
MsG0380014727.01.T01 AT3G53230 36.770 291 131 5 25 314 197 435 8.92e-45 170
MsG0380014727.01.T01 AT3G53230 32.616 279 138 4 32 309 477 706 9.72e-42 161
MsG0380014727.01.T01 AT1G45000 33.893 298 139 6 32 324 135 379 2.44e-43 159
MsG0380014727.01.T01 AT3G05530 35.154 293 138 6 32 322 167 409 2.58e-43 160
MsG0380014727.01.T01 AT5G43010 33.557 298 140 6 32 324 135 379 3.33e-43 159
MsG0380014727.01.T01 AT1G09100 34.471 293 140 6 32 322 166 408 8.42e-42 156
MsG0380014727.01.T01 AT3G01610 37.370 289 110 9 34 309 231 461 4.28e-37 147
MsG0380014727.01.T01 AT3G01610 33.546 313 147 7 33 343 525 778 1.02e-27 119
MsG0380014727.01.T01 AT3G01610 37.370 289 110 9 34 309 231 461 4.55e-37 147
MsG0380014727.01.T01 AT3G01610 33.546 313 147 7 33 343 525 778 9.53e-28 119
MsG0380014727.01.T01 AT1G05910 33.333 330 160 8 8 331 356 631 9.46e-37 147
MsG0380014727.01.T01 AT3G04340 42.941 170 95 2 33 201 781 949 9.26e-36 144
MsG0380014727.01.T01 AT5G08470 33.217 286 132 8 24 305 832 1062 6.31e-34 138
MsG0380014727.01.T01 AT5G08470 33.217 286 132 8 24 305 823 1053 7.19e-34 138
MsG0380014727.01.T01 AT2G03670 34.532 278 133 3 33 309 283 512 1.20e-33 135
MsG0380014727.01.T01 AT2G03670 32.353 306 136 10 36 328 22 269 2.63e-26 114
MsG0380014727.01.T01 AT1G03000 30.226 354 160 10 8 324 613 916 2.59e-33 136
MsG0380014727.01.T01 AT4G28000 33.333 279 129 6 33 308 515 739 1.58e-32 133
MsG0380014727.01.T01 AT4G28000 33.333 279 129 6 33 308 517 741 1.64e-32 133
MsG0380014727.01.T01 AT4G28000 33.333 279 129 6 33 308 517 741 1.65e-32 133
MsG0380014727.01.T01 AT1G64110 32.857 280 132 6 32 308 517 743 6.24e-31 128
MsG0380014727.01.T01 AT1G64110 32.857 280 132 6 32 308 517 743 6.24e-31 128
MsG0380014727.01.T01 AT1G64110 32.857 280 132 6 32 308 515 741 6.57e-31 128
MsG0380014727.01.T01 AT1G64110 32.857 280 132 6 32 308 515 741 6.57e-31 128
MsG0380014727.01.T01 AT1G64110 32.857 280 132 6 32 308 512 738 8.51e-31 128
MsG0380014727.01.T01 AT4G24860 33.449 287 131 8 33 315 815 1045 2.41e-30 127
MsG0380014727.01.T01 AT4G24860 33.449 287 131 8 33 315 813 1043 2.49e-30 127
MsG0380014727.01.T01 AT4G24860 33.449 287 131 8 33 315 790 1020 2.64e-30 127
MsG0380014727.01.T01 AT4G24860 33.449 287 131 8 33 315 817 1047 2.66e-30 127
MsG0380014727.01.T01 AT5G52882 32.258 279 132 6 33 308 514 738 8.86e-30 125
MsG0380014727.01.T01 AT1G02890 32.895 304 140 9 33 332 941 1184 4.65e-29 123
MsG0380014727.01.T01 AT3G15120 31.119 286 139 7 27 305 719 953 2.87e-28 121
MsG0380014727.01.T01 AT3G15120 31.119 286 139 7 27 305 709 943 3.71e-28 120
MsG0380014727.01.T01 AT4G02480 33.214 280 130 7 33 308 960 1186 1.20e-27 119
MsG0380014727.01.T01 AT1G45000 40.559 143 79 3 32 171 135 274 3.34e-27 113
MsG0380014727.01.T01 AT3G27120 32.624 282 128 9 28 303 395 620 4.45e-27 116
MsG0380014727.01.T01 AT2G03670 32.353 306 136 10 36 328 22 269 9.13e-27 113
MsG0380014727.01.T01 AT2G03670 41.429 140 81 1 33 171 283 422 2.86e-21 97.1
MsG0380014727.01.T01 AT2G27600 39.891 183 90 6 32 206 128 298 7.03e-26 110
MsG0380014727.01.T01 AT2G45500 31.338 284 138 8 28 308 75 304 1.16e-25 108
MsG0380014727.01.T01 AT2G45500 31.338 284 138 8 28 308 75 304 1.16e-25 108
MsG0380014727.01.T01 AT2G45500 31.338 284 138 8 28 308 218 447 4.28e-25 109
MsG0380014727.01.T01 AT2G45500 31.338 284 138 8 28 308 212 441 4.57e-25 109
MsG0380014727.01.T01 AT2G45500 31.338 284 138 8 28 308 208 437 5.18e-25 108
MsG0380014727.01.T01 AT1G80350 31.119 286 132 8 33 308 236 466 1.20e-23 105
MsG0380014727.01.T01 AT3G19740 31.022 274 132 7 33 302 701 921 9.35e-23 103
MsG0380014727.01.T01 AT4G04910 31.034 290 126 11 58 322 239 479 1.02e-22 103
MsG0380014727.01.T01 AT1G50140 31.786 280 122 8 33 302 711 931 1.08e-22 103
MsG0380014727.01.T01 AT1G50140 31.786 280 122 8 33 302 711 931 1.08e-22 103
MsG0380014727.01.T01 AT1G50140 31.786 280 122 8 33 302 711 931 1.08e-22 103
MsG0380014727.01.T01 AT1G50140 31.786 280 122 8 33 302 689 909 1.09e-22 103
MsG0380014727.01.T01 AT1G50140 31.786 280 122 8 33 302 689 909 1.09e-22 103
MsG0380014727.01.T01 AT5G53540 31.206 282 132 10 33 308 84 309 4.15e-22 99.4
MsG0380014727.01.T01 AT2G34560 39.326 178 100 6 32 206 99 271 5.01e-22 98.6
MsG0380014727.01.T01 AT2G34560 39.326 178 100 6 32 206 108 280 5.50e-22 98.6
MsG0380014727.01.T01 AT1G62130 31.359 287 125 10 33 315 750 968 5.61e-22 101
MsG0380014727.01.T01 AT1G62130 31.359 287 125 10 33 315 743 961 6.05e-22 100
MsG0380014727.01.T01 AT5G08470 31.746 189 110 4 24 208 832 1005 7.42e-22 100
MsG0380014727.01.T01 AT4G04180 34.239 184 103 6 31 203 309 485 1.40e-21 99.4
MsG0380014727.01.T01 AT4G04180 34.239 184 103 6 31 203 314 490 1.40e-21 99.4
MsG0380014727.01.T01 AT4G27680 29.078 282 138 8 33 308 81 306 1.52e-20 94.4
MsG0380014727.01.T01 AT1G02890 30.921 304 118 12 33 332 941 1156 1.58e-18 90.5
MsG0380014727.01.T01 AT5G17760 29.918 244 143 10 4 230 180 412 7.19e-13 71.6
MsG0380014727.01.T01 AT2G18193 33.908 174 96 7 34 199 207 369 1.10e-11 67.8
MsG0380014727.01.T01 AT3G28580 28.194 227 127 8 7 208 180 395 2.10e-11 67.0
MsG0380014727.01.T01 AT3G50940 32.558 172 101 6 34 199 211 373 9.29e-11 64.7

Find 150 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCGCCTGGTGACCCTTCT+TGG 0.206218 3:+58926138 MsG0380014727.01.T01:CDS
GCTGAAGAAGTTGTTTATTC+TGG 0.219593 3:+58926171 MsG0380014727.01.T01:CDS
CCGAGCAAATCCTACTGTTT+TGG 0.245175 3:+58926518 MsG0380014727.01.T01:CDS
ATCTTACAGGCAGGCCTTCC+TGG 0.249720 3:+58924364 MsG0380014727.01.T01:intron
ATCTCTTTGCAAGGGCAAAA+AGG 0.255239 3:+58924506 MsG0380014727.01.T01:CDS
TTTGATTATGTGAAAGATAT+TGG 0.262015 3:+58927617 MsG0380014727.01.T01:three_prime_UTR
CCAAGGTCAGGAGGGGCTTT+GGG 0.262526 3:+58926054 MsG0380014727.01.T01:CDS
AATGCCACAGGTCTGGTAAA+TGG 0.282581 3:+58927492 MsG0380014727.01.T01:three_prime_UTR
TACCTCGTCGATAAATATTA+TGG 0.283704 3:-58924539 None:intergenic
CTTATATCTCAAATACTAAT+AGG 0.305751 3:+58927361 MsG0380014727.01.T01:three_prime_UTR
GCCAAGGTCAGGAGGGGCTT+TGG 0.312957 3:+58926053 MsG0380014727.01.T01:CDS
GCTTCTCTTCCGATCCTATC+AGG 0.316464 3:-58925272 None:intergenic
TAGCAGTGTGGAATGTAATT+TGG 0.320256 3:+58927300 MsG0380014727.01.T01:three_prime_UTR
CTAGCAGAACAACTTATAAA+TGG 0.322600 3:-58924436 None:intergenic
AATTCTGCAGTGATAGTTCT+TGG 0.332473 3:+58924867 MsG0380014727.01.T01:CDS
AGTGGTGGGATCGATGAATC+TGG 0.332790 3:+58926312 MsG0380014727.01.T01:CDS
TCTATGACCACTGGTTTCAC+TGG 0.340124 3:+58925365 MsG0380014727.01.T01:CDS
GCTACAAAAGTGGTTAAAAT+TGG 0.342779 3:+58927154 MsG0380014727.01.T01:CDS
GGAGGGTCTTGGTGCTTACT+TGG 0.343003 3:+58926539 MsG0380014727.01.T01:CDS
GCAGTTGCAAAGCTTCTTCC+TGG 0.354861 3:+58925857 MsG0380014727.01.T01:CDS
AGTAGGATTTGCTCGGATAA+TGG 0.355003 3:-58926511 None:intergenic
GTGGCATTGGTTGTGTGAAT+TGG 0.359596 3:-58927477 None:intergenic
AGCAGTGTGGAATGTAATTT+GGG 0.377888 3:+58927301 MsG0380014727.01.T01:three_prime_UTR
CCTTGTTGATCTTGTTCAAA+AGG 0.380535 3:+58926446 MsG0380014727.01.T01:CDS
GTAAAGCAGCCTCGTTTACT+AGG 0.389025 3:-58925485 None:intergenic
CTCCATGCAAGTCAAAATAA+AGG 0.390400 3:-58924988 None:intergenic
CAGATTCGGAATCGCAAATC+AGG 0.392571 3:+58923457 MsG0380014727.01.T01:CDS
ACTACACGGTCAAATCTTCC+TGG 0.397635 3:-58924933 None:intergenic
GACCCTGCTGTTCGCCGTCC+AGG 0.397650 3:+58924915 MsG0380014727.01.T01:CDS
TACAAGGCTATAGCTGAATA+TGG 0.397696 3:+58926246 MsG0380014727.01.T01:CDS
CAACTTTGTATATTTCTGTA+AGG 0.414676 3:+58927399 MsG0380014727.01.T01:three_prime_UTR
TATGTCATATTAACAATGTA+TGG 0.415980 3:-58927554 None:intergenic
TGACGAGTTGCTTGGTCGCC+TGG 0.417310 3:+58926125 MsG0380014727.01.T01:CDS
TTAGCCAAGGATGTTGGCCT+TGG 0.425284 3:+58925332 MsG0380014727.01.T01:CDS
CTTCCTGGACGGCGAACAGC+AGG 0.426000 3:-58924918 None:intergenic
AAGATTTGACCGTGTAGTTA+TGG 0.428371 3:+58924938 MsG0380014727.01.T01:CDS
AGCTCCTTGGGGAAAGGATC+AGG 0.431395 3:+58926341 MsG0380014727.01.T01:CDS
GTGGTGGGATCGATGAATCT+GGG 0.433378 3:+58926313 MsG0380014727.01.T01:CDS
CCAAGTCGTGTGTATCTGTC+TGG 0.439684 3:-58923740 None:intergenic
CTATTAGCAAAGGCTGTGGC+TGG 0.441269 3:+58924400 MsG0380014727.01.T01:CDS
ATTTACCAGACCTGTGGCAT+TGG 0.443726 3:-58927490 None:intergenic
CTATTCATTGACGAGTTGCT+TGG 0.447609 3:+58926117 MsG0380014727.01.T01:CDS
CATACGAAGAGCGACTGATA+TGG 0.449900 3:+58926221 MsG0380014727.01.T01:CDS
ACCTCAACACGTGGTTGTCC+AGG 0.451266 3:-58925875 None:intergenic
GTCATAAACTTGTCTGCAAT+GGG 0.453109 3:-58927253 None:intergenic
CTTAGGTGGAAGCACCTGAT+AGG 0.455298 3:+58925258 MsG0380014727.01.T01:intron
TATTCTGGACGAGTTTCAAC+TGG 0.458779 3:+58926186 MsG0380014727.01.T01:CDS
GGGTGCAGCTCCTTGGGGAA+AGG 0.459201 3:+58926335 MsG0380014727.01.T01:CDS
GTCGCCAAGGCCAACATCCT+TGG 0.459223 3:-58925336 None:intergenic
ACATAGATATATAAATCAAT+TGG 0.462487 3:+58927521 MsG0380014727.01.T01:three_prime_UTR
AAATATCTATCCTCATTTGT+TGG 0.464047 3:-58926093 None:intergenic
GTTTATTATATCATATTATG+TGG 0.465260 3:+58923246 MsG0380014727.01.T01:CDS
AGCATACTGCTGGTCAGATT+CGG 0.467332 3:+58923443 MsG0380014727.01.T01:intron
CCCAAAGCCCCTCCTGACCT+TGG 0.473553 3:-58926054 None:intergenic
TGTAGAGTTGTATGTTGGCA+TGG 0.475461 3:+58924465 MsG0380014727.01.T01:CDS
GTCCTCCAAGAAGGGTCACC+AGG 0.476492 3:-58926143 None:intergenic
TATTTGAGATATAAGTTCAC+TGG 0.479383 3:-58927353 None:intergenic
CACAACCAATGCCACAGGTC+TGG 0.480656 3:+58927485 MsG0380014727.01.T01:three_prime_UTR
AACTTTACTGCAGTCTGCAC+TGG 0.484495 3:+58926476 MsG0380014727.01.T01:CDS
TCAGAAAAGGAGAAAGTTGA+GGG 0.486957 3:+58927125 MsG0380014727.01.T01:intron
GACATTGCTTCTATGACCAC+TGG 0.488410 3:+58925356 MsG0380014727.01.T01:CDS
TTTCTCACTTCCTTGCAACT+TGG 0.491996 3:-58925789 None:intergenic
AACGAGGCTGCTTTACTAGC+TGG 0.494002 3:+58925492 MsG0380014727.01.T01:CDS
CGCCTGGTGACCCTTCTTGG+AGG 0.497834 3:+58926141 MsG0380014727.01.T01:CDS
ACAAAAGTGGTTAAAATTGG+TGG 0.498015 3:+58927157 MsG0380014727.01.T01:CDS
TCTTACAGGCAGGCCTTCCT+GGG 0.507245 3:+58924365 MsG0380014727.01.T01:intron
GTAGAGTTGTATGTTGGCAT+GGG 0.508160 3:+58924466 MsG0380014727.01.T01:CDS
TGCTGTTTGCAGCATACTGC+TGG 0.508724 3:+58923433 MsG0380014727.01.T01:intron
TTAAGTATATTGCCAAGGTC+AGG 0.509180 3:+58926042 MsG0380014727.01.T01:CDS
TTTACATTACAGGAGATGGA+TGG 0.513233 3:+58924834 MsG0380014727.01.T01:intron
CAGCTGCACGTCCTCCAAGA+AGG 0.513525 3:-58926152 None:intergenic
TACTAATAGATCAGATGTCT+TGG 0.514690 3:+58924893 MsG0380014727.01.T01:CDS
TGTCATAAACTTGTCTGCAA+TGG 0.515279 3:-58927254 None:intergenic
CAGGCAGGCCTTCCTGGGAC+AGG 0.515319 3:+58924370 MsG0380014727.01.T01:intron
GGACATTGACATAGGGCCTA+TGG 0.516265 3:-58926280 None:intergenic
ACGAAAAGAGCAAGCTCTGT+TGG 0.518247 3:-58927185 None:intergenic
AATAGAGTCTTGCCTGTCCC+AGG 0.519122 3:-58924382 None:intergenic
TCGTTCAGATGACTTTGTAC+TGG 0.519611 3:-58923485 None:intergenic
TATTAGCAAAGGCTGTGGCT+GGG 0.520301 3:+58924401 MsG0380014727.01.T01:CDS
ATTAGCAAAGGCTGTGGCTG+GGG 0.524320 3:+58924402 MsG0380014727.01.T01:CDS
AGAAATATACAAAGTTGTAA+AGG 0.525869 3:-58927393 None:intergenic
GGAGAAGAGACTCTTGCAAT+GGG 0.527586 3:-58927232 None:intergenic
AGCGACTGATATGGCATACA+AGG 0.528014 3:+58926230 MsG0380014727.01.T01:CDS
CTTCCTTTAGCCAAGGATGT+TGG 0.528904 3:+58925326 MsG0380014727.01.T01:CDS
AGAAATTAAGTATATTGCCA+AGG 0.530591 3:+58926037 MsG0380014727.01.T01:intron
AGGCCAACATCCTTGGCTAA+AGG 0.534449 3:-58925329 None:intergenic
GGTCTTGGTGCTTACTTGGA+AGG 0.538276 3:+58926543 MsG0380014727.01.T01:CDS
GAAAGTGTGGACATTGACAT+AGG 0.541780 3:-58926288 None:intergenic
TGTTAATATGACATATGACT+TGG 0.542870 3:+58927562 MsG0380014727.01.T01:three_prime_UTR
GAGGCTGGTCACGCCGTAGT+AGG 0.543790 3:+58925830 MsG0380014727.01.T01:CDS
GACTCTTGCAATGGGAGAAG+AGG 0.546106 3:-58927224 None:intergenic
TATCTATCCTCATTTGTTGG+CGG 0.547036 3:-58926090 None:intergenic
CTATGACCACTGGTTTCACT+GGG 0.550111 3:+58925366 MsG0380014727.01.T01:CDS
TTACATTACAGGAGATGGAT+GGG 0.551162 3:+58924835 MsG0380014727.01.T01:intron
TGGTGGGATCGATGAATCTG+GGG 0.555277 3:+58926314 MsG0380014727.01.T01:CDS
CCAGACAGATACACACGACT+TGG 0.556608 3:+58923740 MsG0380014727.01.T01:CDS
TCGTCGATAAATATTATGGA+TGG 0.558809 3:-58924535 None:intergenic
AAAAGAACTTCCTTTAGCCA+AGG 0.558871 3:+58925319 MsG0380014727.01.T01:CDS
TTATACTCCGCCAACAAATG+AGG 0.559411 3:+58926083 MsG0380014727.01.T01:CDS
AGCTGCACGTCCTCCAAGAA+GGG 0.560964 3:-58926151 None:intergenic
ATGTCCACACTTTCTAGTGG+TGG 0.564866 3:+58926297 MsG0380014727.01.T01:CDS
AAGAAAACTGCCAAGTTGCA+AGG 0.566875 3:+58925779 MsG0380014727.01.T01:CDS
TTCAGAAAAGGAGAAAGTTG+AGG 0.572958 3:+58927124 MsG0380014727.01.T01:intron
AGAGGAGCTAGAAGAGATTG+TGG 0.574409 3:+58923555 MsG0380014727.01.T01:CDS
GGGAGAAGAGACTCTTGCAA+TGG 0.574587 3:-58927233 None:intergenic
TATGGTCTTAATCAGACCAT+AGG 0.576028 3:+58926264 MsG0380014727.01.T01:CDS
TCCTGGACAACCACGTGTTG+AGG 0.576316 3:+58925874 MsG0380014727.01.T01:CDS
GAGTTTGTAGAGTTGTATGT+TGG 0.577372 3:+58924460 MsG0380014727.01.T01:CDS
CCAAAACAGTAGGATTTGCT+CGG 0.578991 3:-58926518 None:intergenic
AGTATATTGCCAAGGTCAGG+AGG 0.583606 3:+58926045 MsG0380014727.01.T01:CDS
ACCAATAAAACACCGCGAGG+AGG 0.585423 3:-58923770 None:intergenic
TGTTGATCTTGTTCAAAAGG+AGG 0.589704 3:+58926449 MsG0380014727.01.T01:CDS
AAAGTGTGGACATTGACATA+GGG 0.596465 3:-58926287 None:intergenic
TGTCCACACTTTCTAGTGGT+GGG 0.597109 3:+58926298 MsG0380014727.01.T01:CDS
GACTCTATTAGCAAAGGCTG+TGG 0.597902 3:+58924396 MsG0380014727.01.T01:CDS
GTTGTTGCACGACATGAGGC+TGG 0.598300 3:+58925815 MsG0380014727.01.T01:CDS
GTGTAAGAGATCTCTTTGCA+AGG 0.606593 3:+58924497 MsG0380014727.01.T01:CDS
TGCAACTGCAGTACCTACTA+CGG 0.606970 3:-58925843 None:intergenic
ATTTCCATTTACCAGACCTG+TGG 0.610516 3:-58927496 None:intergenic
TGGTGTGGATGAAGCTAAAG+AGG 0.610821 3:+58923537 MsG0380014727.01.T01:CDS
CCAAGACCCTCCAAAACAGT+AGG 0.616383 3:-58926528 None:intergenic
GTGGAAGCACCTGATAGGAT+CGG 0.618110 3:+58925263 MsG0380014727.01.T01:CDS
TATATTGCCAAGGTCAGGAG+GGG 0.618324 3:+58926047 MsG0380014727.01.T01:CDS
GTATATTGCCAAGGTCAGGA+GGG 0.623407 3:+58926046 MsG0380014727.01.T01:CDS
ATTCACACAACCAATGCCAC+AGG 0.625007 3:+58927480 MsG0380014727.01.T01:three_prime_UTR
GAGTCTTGCCTGTCCCAGGA+AGG 0.627114 3:-58924378 None:intergenic
TCGTGAGGCAAAATTTCGCA+TGG 0.631448 3:+58924677 MsG0380014727.01.T01:CDS
TGTAAGAGATCTCTTTGCAA+GGG 0.632382 3:+58924498 MsG0380014727.01.T01:CDS
AGGCAAGACTCTATTAGCAA+AGG 0.633199 3:+58924390 MsG0380014727.01.T01:CDS
TCATAGAAGCAATGTCGCCA+AGG 0.635335 3:-58925349 None:intergenic
CATGCAAGTCAAAATAAAGG+AGG 0.641334 3:-58924985 None:intergenic
TGCTGTCGCCAAAAGTCGTG+AGG 0.643534 3:+58924662 MsG0380014727.01.T01:CDS
AGCTGTTGTTGCACGACATG+AGG 0.649841 3:+58925811 MsG0380014727.01.T01:CDS
GCAACCTGATCCTTTCCCCA+AGG 0.649883 3:-58926345 None:intergenic
GATCCCACCACTAGAAAGTG+TGG 0.654135 3:-58926301 None:intergenic
TCAATGTCCACACTTTCTAG+TGG 0.654211 3:+58926294 MsG0380014727.01.T01:CDS
CTTGGTGCTCGTCCTCCTCG+CGG 0.663027 3:+58923758 MsG0380014727.01.T01:CDS
CACGGTCAAATCTTCCTGGA+CGG 0.663665 3:-58924929 None:intergenic
AAAGAGTTTACCTCAACACG+TGG 0.669101 3:-58925884 None:intergenic
AGGGTGAAGAGCTACAAAAG+TGG 0.669383 3:+58927144 MsG0380014727.01.T01:CDS
GGTGGGATCGATGAATCTGG+GGG 0.671837 3:+58926315 MsG0380014727.01.T01:CDS
TTCCTGGACGGCGAACAGCA+GGG 0.682979 3:-58924917 None:intergenic
ATCCATAATATTTATCGACG+AGG 0.688964 3:+58924537 MsG0380014727.01.T01:CDS
AAAGAGATCTCTTACACGAG+AGG 0.693569 3:-58924491 None:intergenic
AGTACAAAGTCATCTGAACG+AGG 0.722314 3:+58923487 MsG0380014727.01.T01:CDS
TCTTGCAAACCTAGTAAACG+AGG 0.725490 3:+58925476 MsG0380014727.01.T01:CDS
GAATTACCCAGTGAAACCAG+TGG 0.728736 3:-58925372 None:intergenic
GAATACATACCATAACTACA+CGG 0.737409 3:-58924947 None:intergenic
GCAGTGTGGAATGTAATTTG+GGG 0.751424 3:+58927302 MsG0380014727.01.T01:three_prime_UTR
CATACCAATAAAACACCGCG+AGG 0.758136 3:-58923773 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTTAGTTATTTGATT+GGG + Chr3:58925089-58925108 MsG0380014727.01.T01:intron 10.0%
!! AAATTGTAAATAAGAAAAAA+TGG + Chr3:58925124-58925143 MsG0380014727.01.T01:intron 10.0%
!! TAAAAATTTAGTTATTTGAT+TGG + Chr3:58925088-58925107 MsG0380014727.01.T01:intron 10.0%
!! ACATAGATATATAAATCAAT+TGG + Chr3:58927521-58927540 MsG0380014727.01.T01:three_prime_UTR 15.0%
!! ATGACTATATGTTAAAAAAA+AGG - Chr3:58927437-58927456 None:intergenic 15.0%
!! ATTAATCTTCCTTATTAATT+AGG - Chr3:58923317-58923336 None:intergenic 15.0%
!! ATTTATGTATTCAAAGAAAA+AGG - Chr3:58925413-58925432 None:intergenic 15.0%
!! GTTTATTATATCATATTATG+TGG + Chr3:58923246-58923265 MsG0380014727.01.T01:CDS 15.0%
!! TTAATCTTCCTTATTAATTA+GGG - Chr3:58923316-58923335 None:intergenic 15.0%
!! TTCTTTGAATACATAAATAT+TGG + Chr3:58925415-58925434 MsG0380014727.01.T01:intron 15.0%
!!! ATACTTGAATTTTCAATTTT+TGG + Chr3:58926571-58926590 MsG0380014727.01.T01:intron 15.0%
!!! ATATGATAATGAATATAACA+CGG - Chr3:58923881-58923900 None:intergenic 15.0%
!!! ATTAAATTTTGAAACTTGAA+TGG + Chr3:58923820-58923839 MsG0380014727.01.T01:intron 15.0%
!!! CTTTTCTATTAAATATTGAA+GGG + Chr3:58926850-58926869 MsG0380014727.01.T01:intron 15.0%
!!! TATTTTTATTTTCAATCTTC+TGG + Chr3:58923657-58923676 MsG0380014727.01.T01:intron 15.0%
!!! TTAAATTTTGAAACTTGAAT+GGG + Chr3:58923821-58923840 MsG0380014727.01.T01:intron 15.0%
!! AAAAGATAAACAAAGTCAAA+TGG + Chr3:58926686-58926705 MsG0380014727.01.T01:intron 20.0%
!! AATAAGATGAAAACAACTTA+TGG + Chr3:58926755-58926774 MsG0380014727.01.T01:intron 20.0%
!! AGAAATATACAAAGTTGTAA+AGG - Chr3:58927396-58927415 None:intergenic 20.0%
!! ATAATTAATCAAGTACTTAG+TGG - Chr3:58923403-58923422 None:intergenic 20.0%
!! ATACCAAAATAAATTCTGAT+TGG - Chr3:58924633-58924652 None:intergenic 20.0%
!! ATGTTATATTTACAACTACT+TGG + Chr3:58925972-58925991 MsG0380014727.01.T01:intron 20.0%
!! CTTATATCTCAAATACTAAT+AGG + Chr3:58927361-58927380 MsG0380014727.01.T01:three_prime_UTR 20.0%
!! GATAAATCAACAGATATTTA+CGG - Chr3:58924347-58924366 None:intergenic 20.0%
!! TAATCTTCCTTATTAATTAG+GGG - Chr3:58923315-58923334 None:intergenic 20.0%
!! TATGTCATATTAACAATGTA+TGG - Chr3:58927557-58927576 None:intergenic 20.0%
!! TTTCAAAATTTAATTCCTTC+CGG - Chr3:58923814-58923833 None:intergenic 20.0%
!! TTTGATTATGTGAAAGATAT+TGG + Chr3:58927617-58927636 MsG0380014727.01.T01:three_prime_UTR 20.0%
!!! AAACCAATCAGAATTTATTT+TGG + Chr3:58924627-58924646 MsG0380014727.01.T01:intron 20.0%
!!! AATAAGTTGAAAATAGCTTA+TGG - Chr3:58924129-58924148 None:intergenic 20.0%
!!! ATAAATTTTATCGAGAAATG+CGG - Chr3:58925038-58925057 None:intergenic 20.0%
!!! GATGAATTTTAACATTGTTT+TGG + Chr3:58924308-58924327 MsG0380014727.01.T01:intron 20.0%
!!! GCTTTTCTATTAAATATTGA+AGG + Chr3:58926849-58926868 MsG0380014727.01.T01:intron 20.0%
!!! GTACAAAGAATTTTTGAATA+TGG + Chr3:58927277-58927296 MsG0380014727.01.T01:three_prime_UTR 20.0%
!!! TCAAATGGTTTTTATATAAG+TGG + Chr3:58926701-58926720 MsG0380014727.01.T01:intron 20.0%
!!! TTTTGGTGATTTTCAATATT+TGG + Chr3:58926588-58926607 MsG0380014727.01.T01:intron 20.0%
! AAAACTTGGTATCCATATAT+AGG + Chr3:58925154-58925173 MsG0380014727.01.T01:intron 25.0%
! AAAGAAATGAGTAATGTCAA+GGG - Chr3:58924756-58924775 None:intergenic 25.0%
! AAATACCGAAATACTGATAT+TGG + Chr3:58925181-58925200 MsG0380014727.01.T01:intron 25.0%
! AAATATCTATCCTCATTTGT+TGG - Chr3:58926096-58926115 None:intergenic 25.0%
! AACTTCCAAAAATTCTTCTT+AGG + Chr3:58925241-58925260 MsG0380014727.01.T01:intron 25.0%
! ACAATCAATACAATAACTAG+TGG + Chr3:58923341-58923360 MsG0380014727.01.T01:intron 25.0%
! AGAAATTAAGTATATTGCCA+AGG + Chr3:58926037-58926056 MsG0380014727.01.T01:intron 25.0%
! AGCATACAAAATGATTGAAT+TGG - Chr3:58926400-58926419 None:intergenic 25.0%
! ATCTAAAAAATGCTAATGCT+TGG + Chr3:58926819-58926838 MsG0380014727.01.T01:intron 25.0%
! CATAATAAAAAAAACTTCCC+TGG - Chr3:58923687-58923706 None:intergenic 25.0%
! GGTATATAATCAACTGAAAT+TGG + Chr3:58925597-58925616 MsG0380014727.01.T01:intron 25.0%
! GTGAGAATGTACATTTATAT+AGG + Chr3:58923268-58923287 MsG0380014727.01.T01:intron 25.0%
! TAGTTAACCCCTAATTAATA+AGG + Chr3:58923305-58923324 MsG0380014727.01.T01:intron 25.0%
! TGACTAAGTTGTAAAATAGA+AGG - Chr3:58923635-58923654 None:intergenic 25.0%
! TGTACATTTATATAGGTAGT+AGG + Chr3:58923275-58923294 MsG0380014727.01.T01:intron 25.0%
! TGTTAATATGACATATGACT+TGG + Chr3:58927562-58927581 MsG0380014727.01.T01:three_prime_UTR 25.0%
! TTATTAATTAGGGGTTAACT+AGG - Chr3:58923306-58923325 None:intergenic 25.0%
!! CAACTTTGTATATTTCTGTA+AGG + Chr3:58927399-58927418 MsG0380014727.01.T01:three_prime_UTR 25.0%
!! TATATATGGATACCAAGTTT+TGG - Chr3:58925155-58925174 None:intergenic 25.0%
!! TATTTGAGATATAAGTTCAC+TGG - Chr3:58927356-58927375 None:intergenic 25.0%
!!! AAATGTTTTCTCTTGTTTCA+TGG + Chr3:58924565-58924584 MsG0380014727.01.T01:intron 25.0%
!!! AATGTTTTCTCTTGTTTCAT+GGG + Chr3:58924566-58924585 MsG0380014727.01.T01:intron 25.0%
!!! AGCTATTTTCATGAGTTATA+AGG - Chr3:58924185-58924204 None:intergenic 25.0%
!!! CGGTATTTTAAACCTATATA+TGG - Chr3:58925169-58925188 None:intergenic 25.0%
!!! CTTATCATAGTTCTAAATTG+CGG + Chr3:58926924-58926943 MsG0380014727.01.T01:intron 25.0%
!!! TAACATTGTTTTGGAATTAG+TGG + Chr3:58924317-58924336 MsG0380014727.01.T01:intron 25.0%
!!! TAGCATTTTTTAGATTGTCT+GGG - Chr3:58926814-58926833 None:intergenic 25.0%
!!! TATCTGTTGATTTATCTTAC+AGG + Chr3:58924351-58924370 MsG0380014727.01.T01:intron 25.0%
!!! TATGATGATTTTCACTTTTC+AGG + Chr3:58923703-58923722 MsG0380014727.01.T01:intron 25.0%
!!! TTAGCATTTTTTAGATTGTC+TGG - Chr3:58926815-58926834 None:intergenic 25.0%
!!! TTTTGGAAACATGAACTTTT+AGG - Chr3:58925301-58925320 None:intergenic 25.0%
AAATTGCGGTTGCAATATAA+AGG + Chr3:58926938-58926957 MsG0380014727.01.T01:intron 30.0%
ACAAAAGTGGTTAAAATTGG+TGG + Chr3:58927157-58927176 MsG0380014727.01.T01:CDS 30.0%
ACAAGCTCAATTTACATTAC+AGG + Chr3:58924824-58924843 MsG0380014727.01.T01:intron 30.0%
ATCCATAATATTTATCGACG+AGG + Chr3:58924537-58924556 MsG0380014727.01.T01:CDS 30.0%
ATTTCATCACAACAACTGAT+TGG - Chr3:58925728-58925747 None:intergenic 30.0%
CACTGTGAATCTTAATATTG+TGG - Chr3:58927015-58927034 None:intergenic 30.0%
CTAGCAGAACAACTTATAAA+TGG - Chr3:58924439-58924458 None:intergenic 30.0%
CTAGTCCAATATCAGTATTT+CGG - Chr3:58925189-58925208 None:intergenic 30.0%
GAAAGAAATGAGTAATGTCA+AGG - Chr3:58924757-58924776 None:intergenic 30.0%
GAATACATACCATAACTACA+CGG - Chr3:58924950-58924969 None:intergenic 30.0%
GCTACAAAAGTGGTTAAAAT+TGG + Chr3:58927154-58927173 MsG0380014727.01.T01:CDS 30.0%
GTTCAACATCATAAGTATCA+TGG - Chr3:58927060-58927079 None:intergenic 30.0%
TAAGGATCAATTTACAGTCA+TGG - Chr3:58926908-58926927 None:intergenic 30.0%
TACCTCGTCGATAAATATTA+TGG - Chr3:58924542-58924561 None:intergenic 30.0%
TACTAATAGATCAGATGTCT+TGG + Chr3:58924893-58924912 MsG0380014727.01.T01:CDS 30.0%
TCAATTTACATTACAGGAGA+TGG + Chr3:58924830-58924849 MsG0380014727.01.T01:intron 30.0%
TCGTCGATAAATATTATGGA+TGG - Chr3:58924538-58924557 None:intergenic 30.0%
TTAACAATAGAATCGCAAGT+CGG - Chr3:58924603-58924622 None:intergenic 30.0%
TTCCAAAAATTCTTCTTAGG+TGG + Chr3:58925244-58925263 MsG0380014727.01.T01:intron 30.0%
! CGCAATTTAGAACTATGATA+AGG - Chr3:58926926-58926945 None:intergenic 30.0%
! TTCCACCTAAGAAGAATTTT+TGG - Chr3:58925249-58925268 None:intergenic 30.0%
! TTTACAACTACTTGGTTCTT+TGG + Chr3:58925980-58925999 MsG0380014727.01.T01:intron 30.0%
!! AGTATCATGGTTCTAAATTG+TGG - Chr3:58927047-58927066 None:intergenic 30.0%
!! TGAACCAAGTTACTTGTTTT+AGG + Chr3:58925748-58925767 MsG0380014727.01.T01:intron 30.0%
!!! ATTGTTTTGGAATTAGTGGT+AGG + Chr3:58924321-58924340 MsG0380014727.01.T01:intron 30.0%
!!! CAATCTAAAGGGTGTTTTAA+AGG + Chr3:58923609-58923628 MsG0380014727.01.T01:intron 30.0%
!!! GAACCAAGTTACTTGTTTTA+GGG + Chr3:58925749-58925768 MsG0380014727.01.T01:intron 30.0%
AAAAGAACTTCCTTTAGCCA+AGG + Chr3:58925319-58925338 MsG0380014727.01.T01:CDS 35.0%
AAAATGGCTACACCAAAACT+TGG + Chr3:58925140-58925159 MsG0380014727.01.T01:intron 35.0%
AAAGTGTGGACATTGACATA+GGG - Chr3:58926290-58926309 None:intergenic 35.0%
AAGATTTGACCGTGTAGTTA+TGG + Chr3:58924938-58924957 MsG0380014727.01.T01:CDS 35.0%
AAGCTATCATGGATAACTTG+TGG - Chr3:58924153-58924172 None:intergenic 35.0%
AATTCTGCAGTGATAGTTCT+TGG + Chr3:58924867-58924886 MsG0380014727.01.T01:CDS 35.0%
ACACGGGCATAAATAATTGA+AGG - Chr3:58923991-58924010 None:intergenic 35.0%
AGCAGTGTGGAATGTAATTT+GGG + Chr3:58927301-58927320 MsG0380014727.01.T01:three_prime_UTR 35.0%
ATGCCCTAAAACAAGTAACT+TGG - Chr3:58925755-58925774 None:intergenic 35.0%
CAAAAACCCTATTATCCATG+AGG + Chr3:58924798-58924817 MsG0380014727.01.T01:intron 35.0%
CATGCAAGTCAAAATAAAGG+AGG - Chr3:58924988-58925007 None:intergenic 35.0%
CCTTGTTGATCTTGTTCAAA+AGG + Chr3:58926446-58926465 MsG0380014727.01.T01:CDS 35.0%
CTACTGACAGTACAAATATG+CGG + Chr3:58925940-58925959 MsG0380014727.01.T01:intron 35.0%
CTCCATGCAAGTCAAAATAA+AGG - Chr3:58924991-58925010 None:intergenic 35.0%
GAAGGGATTGTAATGAACTT+GGG + Chr3:58926867-58926886 MsG0380014727.01.T01:intron 35.0%
GAGTTTGTAGAGTTGTATGT+TGG + Chr3:58924460-58924479 MsG0380014727.01.T01:CDS 35.0%
GATAATGAATATAACACGGC+AGG - Chr3:58923877-58923896 None:intergenic 35.0%
GATCCTAGTCTGTAAATACA+GGG + Chr3:58926420-58926439 MsG0380014727.01.T01:intron 35.0%
GATGTTGAACCACTTCATTT+CGG + Chr3:58927070-58927089 MsG0380014727.01.T01:intron 35.0%
GCTGAAGAAGTTGTTTATTC+TGG + Chr3:58926171-58926190 MsG0380014727.01.T01:CDS 35.0%
GGTTTCAGAATTTCCTGTAA+CGG + Chr3:58926959-58926978 MsG0380014727.01.T01:intron 35.0%
GTCATAAACTTGTCTGCAAT+GGG - Chr3:58927256-58927275 None:intergenic 35.0%
GTTATTTGATTGGGCAAAGA+AGG + Chr3:58925098-58925117 MsG0380014727.01.T01:intron 35.0%
TAACAATAGAATCGCAAGTC+GGG - Chr3:58924602-58924621 None:intergenic 35.0%
TACAAGGCTATAGCTGAATA+TGG + Chr3:58926246-58926265 MsG0380014727.01.T01:CDS 35.0%
TAGCAGTGTGGAATGTAATT+TGG + Chr3:58927300-58927319 MsG0380014727.01.T01:three_prime_UTR 35.0%
TATGTTGTGCTTAACTTCTC+CGG + Chr3:58923792-58923811 MsG0380014727.01.T01:intron 35.0%
TCAAACATGCAGAAAAGACA+CGG - Chr3:58924008-58924027 None:intergenic 35.0%
TCAGAAAAGGAGAAAGTTGA+GGG + Chr3:58927125-58927144 MsG0380014727.01.T01:intron 35.0%
TGAAGGGATTGTAATGAACT+TGG + Chr3:58926866-58926885 MsG0380014727.01.T01:intron 35.0%
TGATCCTAGTCTGTAAATAC+AGG + Chr3:58926419-58926438 MsG0380014727.01.T01:intron 35.0%
TGTAAGAGATCTCTTTGCAA+GGG + Chr3:58924498-58924517 MsG0380014727.01.T01:CDS 35.0%
TGTCATAAACTTGTCTGCAA+TGG - Chr3:58927257-58927276 None:intergenic 35.0%
TGTTGATCTTGTTCAAAAGG+AGG + Chr3:58926449-58926468 MsG0380014727.01.T01:CDS 35.0%
TTAAGTATATTGCCAAGGTC+AGG + Chr3:58926042-58926061 MsG0380014727.01.T01:CDS 35.0%
TTACATTACAGGAGATGGAT+GGG + Chr3:58924835-58924854 MsG0380014727.01.T01:intron 35.0%
TTCAATCTTCTGGTAATCCA+GGG + Chr3:58923667-58923686 MsG0380014727.01.T01:intron 35.0%
TTCAGAAAAGGAGAAAGTTG+AGG + Chr3:58927124-58927143 MsG0380014727.01.T01:intron 35.0%
TTCAGCGCTTACAATCTAAA+GGG + Chr3:58923598-58923617 MsG0380014727.01.T01:intron 35.0%
TTTACATTACAGGAGATGGA+TGG + Chr3:58924834-58924853 MsG0380014727.01.T01:intron 35.0%
TTTCAATCTTCTGGTAATCC+AGG + Chr3:58923666-58923685 MsG0380014727.01.T01:intron 35.0%
TTTCAGCGCTTACAATCTAA+AGG + Chr3:58923597-58923616 MsG0380014727.01.T01:intron 35.0%
! AAATTTTGCCTCACGACTTT+TGG - Chr3:58924673-58924692 None:intergenic 35.0%
! CCTTTTGAACAAGATCAACA+AGG - Chr3:58926449-58926468 None:intergenic 35.0%
! GGTGTTTTCAAAAGCTATCA+TGG - Chr3:58924164-58924183 None:intergenic 35.0%
! TATCTATCCTCATTTGTTGG+CGG - Chr3:58926093-58926112 None:intergenic 35.0%
! TATGGTCTTAATCAGACCAT+AGG + Chr3:58926264-58926283 MsG0380014727.01.T01:CDS 35.0%
! TGTTAGCCTCATGGATAATA+GGG - Chr3:58924807-58924826 None:intergenic 35.0%
! TTGTTAGCCTCATGGATAAT+AGG - Chr3:58924808-58924827 None:intergenic 35.0%
! TTTTGAATATGGTAGCAGTG+TGG + Chr3:58927288-58927307 MsG0380014727.01.T01:three_prime_UTR 35.0%
!! ATGGTTCTAAATTGTGGTTG+TGG - Chr3:58927041-58927060 None:intergenic 35.0%
!! GATATTGGCTCTTCTGTTTA+TGG + Chr3:58927632-58927651 MsG0380014727.01.T01:three_prime_UTR 35.0%
!! TGTTGATTTATCTTACAGGC+AGG + Chr3:58924355-58924374 MsG0380014727.01.T01:intron 35.0%
!!! ATTTTGACTTGCATGGAGAT+GGG + Chr3:58924993-58925012 MsG0380014727.01.T01:CDS 35.0%
!!! CTCCTTTATTTTGACTTGCA+TGG + Chr3:58924986-58925005 MsG0380014727.01.T01:CDS 35.0%
!!! GGCTAAAGGAAGTTCTTTTT+TGG - Chr3:58925318-58925337 None:intergenic 35.0%
!!! TATTTTGACTTGCATGGAGA+TGG + Chr3:58924992-58925011 MsG0380014727.01.T01:CDS 35.0%
AAAGAGATCTCTTACACGAG+AGG - Chr3:58924494-58924513 None:intergenic 40.0%
AAAGAGTTTACCTCAACACG+TGG - Chr3:58925887-58925906 None:intergenic 40.0%
AAGAAAACTGCCAAGTTGCA+AGG + Chr3:58925779-58925798 MsG0380014727.01.T01:CDS 40.0%
AGAATTTCCTGTAACGGCAT+TGG + Chr3:58926965-58926984 MsG0380014727.01.T01:intron 40.0%
AGGCAAGACTCTATTAGCAA+AGG + Chr3:58924390-58924409 MsG0380014727.01.T01:CDS 40.0%
AGTACAAAGTCATCTGAACG+AGG + Chr3:58923487-58923506 MsG0380014727.01.T01:CDS 40.0%
AGTTACCTATGACATGCACA+TGG - Chr3:58923956-58923975 None:intergenic 40.0%
ATCTCTTTGCAAGGGCAAAA+AGG + Chr3:58924506-58924525 MsG0380014727.01.T01:CDS 40.0%
ATTTCCATTTACCAGACCTG+TGG - Chr3:58927499-58927518 None:intergenic 40.0%
CAAACATGCAGAAAAGACAC+GGG - Chr3:58924007-58924026 None:intergenic 40.0%
CAAGCACCATTAGAACGTTA+TGG - Chr3:58927101-58927120 None:intergenic 40.0%
CGCTGAAAATGATGAGAGAA+GGG - Chr3:58923585-58923604 None:intergenic 40.0%
CTATTCATTGACGAGTTGCT+TGG + Chr3:58926117-58926136 MsG0380014727.01.T01:CDS 40.0%
GAAAAATGCAGCCACAATTG+CGG - Chr3:58926993-58927012 None:intergenic 40.0%
GCAGTGTGGAATGTAATTTG+GGG + Chr3:58927302-58927321 MsG0380014727.01.T01:three_prime_UTR 40.0%
GCTTAGCCATAACGTTCTAA+TGG + Chr3:58927092-58927111 MsG0380014727.01.T01:intron 40.0%
GTAGAGTTGTATGTTGGCAT+GGG + Chr3:58924466-58924485 MsG0380014727.01.T01:CDS 40.0%
GTGTAAGAGATCTCTTTGCA+AGG + Chr3:58924497-58924516 MsG0380014727.01.T01:CDS 40.0%
GTTACCTATGACATGCACAT+GGG - Chr3:58923955-58923974 None:intergenic 40.0%
TATTCTGGACGAGTTTCAAC+TGG + Chr3:58926186-58926205 MsG0380014727.01.T01:CDS 40.0%
TCAATGTCCACACTTTCTAG+TGG + Chr3:58926294-58926313 MsG0380014727.01.T01:CDS 40.0%
TCGTTCAGATGACTTTGTAC+TGG - Chr3:58923488-58923507 None:intergenic 40.0%
TCTCCCTGTATTTACAGACT+AGG - Chr3:58926426-58926445 None:intergenic 40.0%
TCTCTTTGCAAGGGCAAAAA+GGG + Chr3:58924507-58924526 MsG0380014727.01.T01:CDS 40.0%
TCTTGCAAACCTAGTAAACG+AGG + Chr3:58925476-58925495 MsG0380014727.01.T01:CDS 40.0%
TGCATGTCATAGGTAACTGT+AGG + Chr3:58923958-58923977 MsG0380014727.01.T01:intron 40.0%
TGGTGCTTGTTCTTCAGAAA+AGG + Chr3:58927112-58927131 MsG0380014727.01.T01:intron 40.0%
TGTAGAGTTGTATGTTGGCA+TGG + Chr3:58924465-58924484 MsG0380014727.01.T01:CDS 40.0%
TGTTTGAGCTAGTGTCTGTT+TGG + Chr3:58924021-58924040 MsG0380014727.01.T01:intron 40.0%
TTATACTCCGCCAACAAATG+AGG + Chr3:58926083-58926102 MsG0380014727.01.T01:CDS 40.0%
TTTCTCACTTCCTTGCAACT+TGG - Chr3:58925792-58925811 None:intergenic 40.0%
! AGTAGGATTTGCTCGGATAA+TGG - Chr3:58926514-58926533 None:intergenic 40.0%
! CCAAAACAGTAGGATTTGCT+CGG - Chr3:58926521-58926540 None:intergenic 40.0%
! GAAAGTGTGGACATTGACAT+AGG - Chr3:58926291-58926310 None:intergenic 40.0%
! TTTTGCTGATATTGCTGGTG+TGG + Chr3:58923522-58923541 MsG0380014727.01.T01:CDS 40.0%
!! AATTGAGCTTGTTAGCCTCA+TGG - Chr3:58924816-58924835 None:intergenic 40.0%
!! AGCAAATCCTACTGTTTTGG+AGG + Chr3:58926521-58926540 MsG0380014727.01.T01:CDS 40.0%
!! GCAAATCCTACTGTTTTGGA+GGG + Chr3:58926522-58926541 MsG0380014727.01.T01:CDS 40.0%
!!! GTCACTTTTGCTGATATTGC+TGG + Chr3:58923517-58923536 MsG0380014727.01.T01:CDS 40.0%
AACTTTACTGCAGTCTGCAC+TGG + Chr3:58926476-58926495 MsG0380014727.01.T01:CDS 45.0%
AATGCCACAGGTCTGGTAAA+TGG + Chr3:58927492-58927511 MsG0380014727.01.T01:three_prime_UTR 45.0%
ACGAAAAGAGCAAGCTCTGT+TGG - Chr3:58927188-58927207 None:intergenic 45.0%
ACTACACGGTCAAATCTTCC+TGG - Chr3:58924936-58924955 None:intergenic 45.0%
AGAGGAGCTAGAAGAGATTG+TGG + Chr3:58923555-58923574 MsG0380014727.01.T01:CDS 45.0%
AGATTGTCTGGGAGAGCTTA+TGG - Chr3:58926803-58926822 None:intergenic 45.0%
AGCATACTGCTGGTCAGATT+CGG + Chr3:58923443-58923462 MsG0380014727.01.T01:intron 45.0%
AGCGACTGATATGGCATACA+AGG + Chr3:58926230-58926249 MsG0380014727.01.T01:CDS 45.0%
AGGGTGAAGAGCTACAAAAG+TGG + Chr3:58927144-58927163 MsG0380014727.01.T01:CDS 45.0%
AGTATATTGCCAAGGTCAGG+AGG + Chr3:58926045-58926064 MsG0380014727.01.T01:CDS 45.0%
ATGGCTAAGCCGAAATGAAG+TGG - Chr3:58927082-58927101 None:intergenic 45.0%
ATTCACACAACCAATGCCAC+AGG + Chr3:58927480-58927499 MsG0380014727.01.T01:three_prime_UTR 45.0%
ATTTACCAGACCTGTGGCAT+TGG - Chr3:58927493-58927512 None:intergenic 45.0%
CAGATTCGGAATCGCAAATC+AGG + Chr3:58923457-58923476 MsG0380014727.01.T01:CDS 45.0%
CATACCAATAAAACACCGCG+AGG - Chr3:58923776-58923795 None:intergenic 45.0%
CATACGAAGAGCGACTGATA+TGG + Chr3:58926221-58926240 MsG0380014727.01.T01:CDS 45.0%
CTAACCCATGTGCATGTCAT+AGG + Chr3:58923948-58923967 MsG0380014727.01.T01:intron 45.0%
CTTCCTTTAGCCAAGGATGT+TGG + Chr3:58925326-58925345 MsG0380014727.01.T01:CDS 45.0%
GAATTACCCAGTGAAACCAG+TGG - Chr3:58925375-58925394 None:intergenic 45.0%
GACATTGCTTCTATGACCAC+TGG + Chr3:58925356-58925375 MsG0380014727.01.T01:CDS 45.0%
GACTCTATTAGCAAAGGCTG+TGG + Chr3:58924396-58924415 MsG0380014727.01.T01:CDS 45.0%
GAGCTAGAAGAGATTGTGGT+AGG + Chr3:58923559-58923578 MsG0380014727.01.T01:intron 45.0%
GCGCTGAAAATGATGAGAGA+AGG - Chr3:58923586-58923605 None:intergenic 45.0%
GCTGTAAGTCATACTCACTG+TGG + Chr3:58925576-58925595 MsG0380014727.01.T01:intron 45.0%
GTAAAGCAGCCTCGTTTACT+AGG - Chr3:58925488-58925507 None:intergenic 45.0%
GTATATTGCCAAGGTCAGGA+GGG + Chr3:58926046-58926065 MsG0380014727.01.T01:CDS 45.0%
TATATTGCCAAGGTCAGGAG+GGG + Chr3:58926047-58926066 MsG0380014727.01.T01:CDS 45.0%
TATTAGCAAAGGCTGTGGCT+GGG + Chr3:58924401-58924420 MsG0380014727.01.T01:CDS 45.0%
TCATAGAAGCAATGTCGCCA+AGG - Chr3:58925352-58925371 None:intergenic 45.0%
TCGTGAGGCAAAATTTCGCA+TGG + Chr3:58924677-58924696 MsG0380014727.01.T01:CDS 45.0%
TGCAACTGCAGTACCTACTA+CGG - Chr3:58925846-58925865 None:intergenic 45.0%
TGGTGTGGATGAAGCTAAAG+AGG + Chr3:58923537-58923556 MsG0380014727.01.T01:CDS 45.0%
TTGTGCTTAACTTCTCCGGA+AGG + Chr3:58923796-58923815 MsG0380014727.01.T01:intron 45.0%
! ATGTCCACACTTTCTAGTGG+TGG + Chr3:58926297-58926316 MsG0380014727.01.T01:CDS 45.0%
! CCGAGCAAATCCTACTGTTT+TGG + Chr3:58926518-58926537 MsG0380014727.01.T01:CDS 45.0%
! TGTCCACACTTTCTAGTGGT+GGG + Chr3:58926298-58926317 MsG0380014727.01.T01:CDS 45.0%
!! CTATGACCACTGGTTTCACT+GGG + Chr3:58925366-58925385 MsG0380014727.01.T01:CDS 45.0%
!! GTGGCATTGGTTGTGTGAAT+TGG - Chr3:58927480-58927499 None:intergenic 45.0%
!! TCTATGACCACTGGTTTCAC+TGG + Chr3:58925365-58925384 MsG0380014727.01.T01:CDS 45.0%
AATAGAGTCTTGCCTGTCCC+AGG - Chr3:58924385-58924404 None:intergenic 50.0%
ACCAATAAAACACCGCGAGG+AGG - Chr3:58923773-58923792 None:intergenic 50.0%
AGCTGTTGTTGCACGACATG+AGG + Chr3:58925811-58925830 MsG0380014727.01.T01:CDS 50.0%
AGGCCAACATCCTTGGCTAA+AGG - Chr3:58925332-58925351 None:intergenic 50.0%
AGGCCATTCTGCTGAACGTT+AGG - Chr3:58923857-58923876 None:intergenic 50.0%
ATTAGCAAAGGCTGTGGCTG+GGG + Chr3:58924402-58924421 MsG0380014727.01.T01:CDS 50.0%
CACGGTCAAATCTTCCTGGA+CGG - Chr3:58924932-58924951 None:intergenic 50.0%
CCAAGACCCTCCAAAACAGT+AGG - Chr3:58926531-58926550 None:intergenic 50.0%
CCAAGTCGTGTGTATCTGTC+TGG - Chr3:58923743-58923762 None:intergenic 50.0%
CCAGACAGATACACACGACT+TGG + Chr3:58923740-58923759 MsG0380014727.01.T01:CDS 50.0%
CTATTAGCAAAGGCTGTGGC+TGG + Chr3:58924400-58924419 MsG0380014727.01.T01:CDS 50.0%
GATCCCACCACTAGAAAGTG+TGG - Chr3:58926304-58926323 None:intergenic 50.0%
GCACCTAACGTTCAGCAGAA+TGG + Chr3:58923851-58923870 MsG0380014727.01.T01:intron 50.0%
GCAGTTGCAAAGCTTCTTCC+TGG + Chr3:58925857-58925876 MsG0380014727.01.T01:CDS 50.0%
GCTTCTCTTCCGATCCTATC+AGG - Chr3:58925275-58925294 None:intergenic 50.0%
GGACATTGACATAGGGCCTA+TGG - Chr3:58926283-58926302 None:intergenic 50.0%
TGGTGGGATCGATGAATCTG+GGG + Chr3:58926314-58926333 MsG0380014727.01.T01:CDS 50.0%
! AACGAGGCTGCTTTACTAGC+TGG + Chr3:58925492-58925511 MsG0380014727.01.T01:CDS 50.0%
! AGTGGTGGGATCGATGAATC+TGG + Chr3:58926312-58926331 MsG0380014727.01.T01:CDS 50.0%
! GTGGTGGGATCGATGAATCT+GGG + Chr3:58926313-58926332 MsG0380014727.01.T01:CDS 50.0%
! TCCTCCTCGCGGTGTTTTAT+TGG + Chr3:58923769-58923788 MsG0380014727.01.T01:CDS 50.0%
! TGCTGTTTGCAGCATACTGC+TGG + Chr3:58923433-58923452 MsG0380014727.01.T01:intron 50.0%
! TTAGCCAAGGATGTTGGCCT+TGG + Chr3:58925332-58925351 MsG0380014727.01.T01:CDS 50.0%
!! CTTAGGTGGAAGCACCTGAT+AGG + Chr3:58925258-58925277 MsG0380014727.01.T01:intron 50.0%
!! GGTCTTGGTGCTTACTTGGA+AGG + Chr3:58926543-58926562 MsG0380014727.01.T01:CDS 50.0%
!! GTGGAAGCACCTGATAGGAT+CGG + Chr3:58925263-58925282 MsG0380014727.01.T01:CDS 50.0%
!!! CCTACTGTTTTGGAGGGTCT+TGG + Chr3:58926528-58926547 MsG0380014727.01.T01:CDS 50.0%
ACCTCAACACGTGGTTGTCC+AGG - Chr3:58925878-58925897 None:intergenic 55.0%
AGCTCCTTGGGGAAAGGATC+AGG + Chr3:58926341-58926360 MsG0380014727.01.T01:CDS 55.0%
AGCTGCACGTCCTCCAAGAA+GGG - Chr3:58926154-58926173 None:intergenic 55.0%
ATCTTACAGGCAGGCCTTCC+TGG + Chr3:58924364-58924383 MsG0380014727.01.T01:intron 55.0%
CACAACCAATGCCACAGGTC+TGG + Chr3:58927485-58927504 MsG0380014727.01.T01:three_prime_UTR 55.0%
GCAACCTGATCCTTTCCCCA+AGG - Chr3:58926348-58926367 None:intergenic 55.0%
GGTGGGATCGATGAATCTGG+GGG + Chr3:58926315-58926334 MsG0380014727.01.T01:CDS 55.0%
GTTGTTGCACGACATGAGGC+TGG + Chr3:58925815-58925834 MsG0380014727.01.T01:CDS 55.0%
TCCTGGACAACCACGTGTTG+AGG + Chr3:58925874-58925893 MsG0380014727.01.T01:CDS 55.0%
TCTTACAGGCAGGCCTTCCT+GGG + Chr3:58924365-58924384 MsG0380014727.01.T01:intron 55.0%
TGCGGTTCCAATGCCGTTAC+AGG - Chr3:58926975-58926994 None:intergenic 55.0%
TGCTGTCGCCAAAAGTCGTG+AGG + Chr3:58924662-58924681 MsG0380014727.01.T01:CDS 55.0%
! CGGCATTGGAACCGCAATTG+TGG + Chr3:58926979-58926998 MsG0380014727.01.T01:intron 55.0%
!! GGAGGGTCTTGGTGCTTACT+TGG + Chr3:58926539-58926558 MsG0380014727.01.T01:CDS 55.0%
CAGCTGCACGTCCTCCAAGA+AGG - Chr3:58926155-58926174 None:intergenic 60.0%
CCAAGGTCAGGAGGGGCTTT+GGG + Chr3:58926054-58926073 MsG0380014727.01.T01:CDS 60.0%
GAGTCTTGCCTGTCCCAGGA+AGG - Chr3:58924381-58924400 None:intergenic 60.0%
GTCCTCCAAGAAGGGTCACC+AGG - Chr3:58926146-58926165 None:intergenic 60.0%
GTCGCCAAGGCCAACATCCT+TGG - Chr3:58925339-58925358 None:intergenic 60.0%
TGACGAGTTGCTTGGTCGCC+TGG + Chr3:58926125-58926144 MsG0380014727.01.T01:CDS 60.0%
TTCCTGGACGGCGAACAGCA+GGG - Chr3:58924920-58924939 None:intergenic 60.0%
! AATCTGGGGGTGCAGCTCCT+TGG + Chr3:58926328-58926347 MsG0380014727.01.T01:CDS 60.0%
! ATCTGGGGGTGCAGCTCCTT+GGG + Chr3:58926329-58926348 MsG0380014727.01.T01:CDS 60.0%
CCCAAAGCCCCTCCTGACCT+TGG - Chr3:58926057-58926076 None:intergenic 65.0%
CGCCTGGTGACCCTTCTTGG+AGG + Chr3:58926141-58926160 MsG0380014727.01.T01:CDS 65.0%
CTTCCTGGACGGCGAACAGC+AGG - Chr3:58924921-58924940 None:intergenic 65.0%
GCCAAGGTCAGGAGGGGCTT+TGG + Chr3:58926053-58926072 MsG0380014727.01.T01:CDS 65.0%
GGGTGCAGCTCCTTGGGGAA+AGG + Chr3:58926335-58926354 MsG0380014727.01.T01:CDS 65.0%
GGTCGCCTGGTGACCCTTCT+TGG + Chr3:58926138-58926157 MsG0380014727.01.T01:CDS 65.0%
! GAGGCTGGTCACGCCGTAGT+AGG + Chr3:58925830-58925849 MsG0380014727.01.T01:CDS 65.0%
! TCTGGGGGTGCAGCTCCTTG+GGG + Chr3:58926330-58926349 MsG0380014727.01.T01:CDS 65.0%
!! CTTGGTGCTCGTCCTCCTCG+CGG + Chr3:58923758-58923777 MsG0380014727.01.T01:CDS 65.0%
CAGGCAGGCCTTCCTGGGAC+AGG + Chr3:58924370-58924389 MsG0380014727.01.T01:intron 70.0%
GACCCTGCTGTTCGCCGTCC+AGG + Chr3:58924915-58924934 MsG0380014727.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 58923244 58927653 58923244 ID=MsG0380014727.01;Name=MsG0380014727.01
Chr3 mRNA 58923244 58927653 58923244 ID=MsG0380014727.01.T01;Parent=MsG0380014727.01;Name=MsG0380014727.01.T01;_AED=0.48;_eAED=0.49;_QI=0|0.81|0.83|1|0.90|0.91|12|379|566
Chr3 exon 58923244 58923267 58923244 ID=MsG0380014727.01.T01:exon:11398;Parent=MsG0380014727.01.T01
Chr3 exon 58923445 58923576 58923445 ID=MsG0380014727.01.T01:exon:11399;Parent=MsG0380014727.01.T01
Chr3 exon 58923725 58923790 58923725 ID=MsG0380014727.01.T01:exon:11400;Parent=MsG0380014727.01.T01
Chr3 exon 58924373 58924558 58924373 ID=MsG0380014727.01.T01:exon:11401;Parent=MsG0380014727.01.T01
Chr3 exon 58924657 58924743 58924657 ID=MsG0380014727.01.T01:exon:11402;Parent=MsG0380014727.01.T01
Chr3 exon 58924846 58925097 58924846 ID=MsG0380014727.01.T01:exon:11403;Parent=MsG0380014727.01.T01
Chr3 exon 58925263 58925387 58925263 ID=MsG0380014727.01.T01:exon:11404;Parent=MsG0380014727.01.T01
Chr3 exon 58925470 58925578 58925470 ID=MsG0380014727.01.T01:exon:11405;Parent=MsG0380014727.01.T01
Chr3 exon 58925770 58925895 58925770 ID=MsG0380014727.01.T01:exon:11406;Parent=MsG0380014727.01.T01
Chr3 exon 58926039 58926362 58926039 ID=MsG0380014727.01.T01:exon:11407;Parent=MsG0380014727.01.T01
Chr3 exon 58926441 58926564 58926441 ID=MsG0380014727.01.T01:exon:11408;Parent=MsG0380014727.01.T01
Chr3 exon 58927129 58927653 58927129 ID=MsG0380014727.01.T01:exon:11409;Parent=MsG0380014727.01.T01
Chr3 CDS 58923244 58923267 58923244 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58923445 58923576 58923445 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58923725 58923790 58923725 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58924373 58924558 58924373 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58924657 58924743 58924657 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58924846 58925097 58924846 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58925263 58925387 58925263 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58925470 58925578 58925470 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58925770 58925895 58925770 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58926039 58926362 58926039 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58926441 58926564 58926441 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 CDS 58927129 58927274 58927129 ID=MsG0380014727.01.T01:cds;Parent=MsG0380014727.01.T01
Chr3 three_prime_UTR 58927275 58927653 58927275 ID=MsG0380014727.01.T01:three_prime_utr;Parent=MsG0380014727.01.T01
Gene Sequence

>MsG0380014727.01.T01

ATGTTTATTATATCATATTATGTGCATACTGCTGGTCAGATTCGGAATCGCAAATCAGGCACTGCCAGTACAAAGTCATCTGAACGAGGTGAAACAGTCACTTTTGCTGATATTGCTGGTGTGGATGAAGCTAAAGAGGAGCTAGAAGAGATTGTGGAATTTCTTCGAAATCCAGACAGATACACACGACTTGGTGCTCGTCCTCCTCGCGGTGTTTTATTGGCAGGCCTTCCTGGGACAGGCAAGACTCTATTAGCAAAGGCTGTGGCTGGGGAAGCTGATGTGCCATTTATAAGTTGTTCTGCTAGTGAGTTTGTAGAGTTGTATGTTGGCATGGGTGCCTCTCGTGTAAGAGATCTCTTTGCAAGGGCAAAAAGGGAAGCTCCATCCATAATATTTATCGACGAGATAGATGCTGTCGCCAAAAGTCGTGAGGCAAAATTTCGCATGGTCAGCAATGATGAACGAGAGCAAACTTTGAATCAGTTGCTCACTGAGATGGATGGGTTTGACAGCAATTCTGCAGTGATAGTTCTTGGAGCTACTAATAGATCAGATGTCTTGGACCCTGCTGTTCGCCGTCCAGGAAGATTTGACCGTGTAGTTATGGTATGTATTCTATGTCAGTACACTACCTCCTTTATTTTGACTTGCATGGAGATGGGCACTAGTGTGTCTGTCTGTCCGCATTTCTCGATAAAATTTATCGAAGTTTCAAAATTCTACGTGATTGTTTATAAAAATTTAGTGGAAGCACCTGATAGGATCGGAAGAGAAGCAATCCTAAAAGTTCATGTTTCCAAAAAAGAACTTCCTTTAGCCAAGGATGTTGGCCTTGGCGACATTGCTTCTATGACCACTGGTTTCACTGGAGCAGATCTTGCAAACCTAGTAAACGAGGCTGCTTTACTAGCTGGAAGACAAAGTAAATCTGTAGTAGAGAAAATTGATTTCATTCATGCTGTAGAAAGATCAATAGCTGGCATAGAAAAGAAAACTGCCAAGTTGCAAGGAAGTGAGAAAGCTGTTGTTGCACGACATGAGGCTGGTCACGCCGTAGTAGGTACTGCAGTTGCAAAGCTTCTTCCTGGACAACCACGTGTTGAGAAATTAAGTATATTGCCAAGGTCAGGAGGGGCTTTGGGATTTACTTATACTCCGCCAACAAATGAGGATAGATATTTGCTATTCATTGACGAGTTGCTTGGTCGCCTGGTGACCCTTCTTGGAGGACGTGCAGCTGAAGAAGTTGTTTATTCTGGACGAGTTTCAACTGGTGCATTTGATGACATACGAAGAGCGACTGATATGGCATACAAGGCTATAGCTGAATATGGTCTTAATCAGACCATAGGCCCTATGTCAATGTCCACACTTTCTAGTGGTGGGATCGATGAATCTGGGGGTGCAGCTCCTTGGGGAAAGGATCAGGGAGACCTTGTTGATCTTGTTCAAAAGGAGGTGCAAACTTTACTGCAGTCTGCACTGGCTGTTGCTCTTTCCATTATCCGAGCAAATCCTACTGTTTTGGAGGGTCTTGGTGCTTACTTGGAAGAAAAGGAGAAAGTTGAGGGTGAAGAGCTACAAAAGTGGTTAAAATTGGTGGTTGCACCAACAGAGCTTGCTCTTTTCGTCAAAAGTACTCAAGCACCTCTTCTCCCATTGCAAGAGTCTCTTCTCCCATTGCAGACAAGTTTATGA

Protein sequence

>MsG0380014727.01.T01

MFIISYYVHTAGQIRNRKSGTASTKSSERGETVTFADIAGVDEAKEELEEIVEFLRNPDRYTRLGARPPRGVLLAGLPGTGKTLLAKAVAGEADVPFISCSASEFVELYVGMGASRVRDLFARAKREAPSIIFIDEIDAVAKSREAKFRMVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPAVRRPGRFDRVVMVCILCQYTTSFILTCMEMGTSVSVCPHFSIKFIEVSKFYVIVYKNLVEAPDRIGREAILKVHVSKKELPLAKDVGLGDIASMTTGFTGADLANLVNEAALLAGRQSKSVVEKIDFIHAVERSIAGIEKKTAKLQGSEKAVVARHEAGHAVVGTAVAKLLPGQPRVEKLSILPRSGGALGFTYTPPTNEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRVSTGAFDDIRRATDMAYKAIAEYGLNQTIGPMSMSTLSSGGIDESGGAAPWGKDQGDLVDLVQKEVQTLLQSALAVALSIIRANPTVLEGLGAYLEEKEKVEGEELQKWLKLVVAPTELALFVKSTQAPLLPLQESLLPLQTSL*