AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010131.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010131.01.T01 MTR_2g078340 93.333 105 7 0 138 242 121 225 1.56e-65 209
MsG0280010131.01.T01 MTR_2g078350 68.571 105 31 1 138 242 251 353 2.89e-45 158
MsG0280010131.01.T01 MTR_2g078250 43.750 80 45 0 24 103 52 131 1.47e-19 82.0
MsG0280010131.01.T01 MTR_2g078240 36.559 93 57 2 152 243 115 206 3.13e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010131.01.T01 AT1G53210 48.387 93 48 0 32 124 63 155 5.30e-25 103
MsG0280010131.01.T01 AT1G53210 37.500 80 49 1 152 231 255 333 1.70e-13 70.1
MsG0280010131.01.T01 AT1G29025 33.636 110 63 1 17 116 34 143 4.98e-13 68.6
MsG0280010131.01.T01 AT2G34030 30.088 113 73 1 35 141 63 175 1.99e-12 67.0
MsG0280010131.01.T01 AT1G29020 23.047 256 134 7 35 228 62 316 8.28e-12 65.1

Find 107 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTCATTTATTTCTGATTT+TGG 0.111752 2:+65157695 MsG0280010131.01.T01:CDS
TCCATTGGAAATCAATTTAT+TGG 0.127818 2:-65157531 None:intergenic
CCTAATGTAGCTGCCATAAA+TGG 0.132670 2:+65160555 MsG0280010131.01.T01:CDS
CCTGAATCCTTAATTCTTCT+TGG 0.168153 2:+65157837 MsG0280010131.01.T01:CDS
CCATGTTCTAATAACATTCT+TGG 0.194031 2:+65157675 MsG0280010131.01.T01:CDS
ATTTGGTCAATGCAGATTTA+TGG 0.197067 2:+65163446 MsG0280010131.01.T01:intron
AAATCTGACTCACCCATTTA+TGG 0.207244 2:-65160568 None:intergenic
TATTAATACGGACATGAAAT+TGG 0.210060 2:-65157174 None:intergenic
TTGTCTTGATATCAAAATTA+AGG 0.249437 2:-65163780 None:intergenic
TTAGCTTGATATCAAAATTA+AGG 0.253158 2:-65163710 None:intergenic
GTTCCATGGAGAATCATATT+TGG 0.274654 2:+65157734 MsG0280010131.01.T01:CDS
GACAATTCATTAAGCCTTCA+TGG 0.292480 2:-65157314 None:intergenic
ACTAATTTCGTTGTCTTTGT+TGG 0.293705 2:-65162328 None:intergenic
GAACAAATCTTCAAGATTCT+TGG 0.301871 2:+65157768 MsG0280010131.01.T01:CDS
AAGCATACCAAGAAGAATTA+AGG 0.304389 2:-65157844 None:intergenic
TGTATCAATATCATTGGTTA+TGG 0.318276 2:+65163650 MsG0280010131.01.T01:three_prime_UTR
CCATTTATGGCAGCTACATT+AGG 0.318327 2:-65160555 None:intergenic
TCTCTTTCATTTAGTCCCTT+TGG 0.323491 2:+65162988 MsG0280010131.01.T01:three_prime_UTR
TGTATTTATGCATAGGTAGA+TGG 0.325348 2:+65157200 MsG0280010131.01.T01:five_prime_UTR
CCAAGAAGAATTAAGGATTC+AGG 0.344838 2:-65157837 None:intergenic
CCATTGGAAATCAATTTATT+GGG 0.359879 2:-65157530 None:intergenic
ATCTATGAACAAAATGTATC+AGG 0.369645 2:+65161603 MsG0280010131.01.T01:CDS
GTGTTTATGAACAACATTCT+TGG 0.370916 2:+65163473 MsG0280010131.01.T01:three_prime_UTR
AGTGAGAATGAATTTGTTGA+TGG 0.378891 2:+65162348 MsG0280010131.01.T01:three_prime_UTR
ACCTCTTGTATCAATATCAT+TGG 0.389657 2:+65163644 MsG0280010131.01.T01:three_prime_UTR
TAACCATGCAGTCACCCCTT+TGG 0.396965 2:-65162855 None:intergenic
AGGTTATTCGAGCAAGTTGA+TGG 0.409987 2:+65162191 MsG0280010131.01.T01:intron
AAGCTATAGCATAGTGATGT+TGG 0.417712 2:+65162879 MsG0280010131.01.T01:three_prime_UTR
GAGTATTGTAAACAAATGTA+TGG 0.419297 2:+65157645 MsG0280010131.01.T01:CDS
CATAGGTAGATGGATTGATA+TGG 0.423934 2:+65157210 MsG0280010131.01.T01:five_prime_UTR
AAGTCATGCTCAGAATGATA+TGG 0.431658 2:+65162020 MsG0280010131.01.T01:CDS
TTGTTGATGGCTTCACCAAA+TGG 0.432286 2:+65162361 MsG0280010131.01.T01:three_prime_UTR
CATTTCATATATGGCCATGA+AGG 0.440461 2:+65157300 MsG0280010131.01.T01:intron
CTAGAATTGAGTTATCCATT+TGG 0.440793 2:-65162376 None:intergenic
GAACAACATTCTTGGCTTTG+TGG 0.441869 2:+65163481 MsG0280010131.01.T01:three_prime_UTR
TATTGATACAAGAGGTATGT+TGG 0.443501 2:-65163637 None:intergenic
CCCAATAAATTGATTTCCAA+TGG 0.444689 2:+65157530 MsG0280010131.01.T01:exon
CACTGGACTTTCAAGTGATA+AGG 0.450927 2:+65158830 MsG0280010131.01.T01:CDS
CTGAAGGGACATCTTATCTC+TGG 0.453770 2:+65161991 MsG0280010131.01.T01:CDS
TGGCAATTGTTTGTATGTGA+TGG 0.455581 2:+65163567 MsG0280010131.01.T01:three_prime_UTR
TTTCTCACGTGTTCAATCCA+TGG 0.456370 2:-65161958 None:intergenic
TCAATTTATTGGGAAGAAAA+CGG 0.458579 2:-65157520 None:intergenic
ATTTGTTTACAATACTCCTC+TGG 0.458626 2:-65157639 None:intergenic
TGGAAGAGAATCAAACCAAA+GGG 0.459663 2:+65162840 MsG0280010131.01.T01:three_prime_UTR
AACTGAGAAAAGAGAAATAG+TGG 0.459912 2:-65157404 None:intergenic
TATGAGTACTTGTTGTTCCA+TGG 0.464281 2:+65157720 MsG0280010131.01.T01:CDS
AGCTCAAAATCTTCTTCTCA+TGG 0.466725 2:+65162409 MsG0280010131.01.T01:three_prime_UTR
CTAATGTAGCTGCCATAAAT+GGG 0.468804 2:+65160556 MsG0280010131.01.T01:CDS
GTAGTGAGGGAGACTCATTT+TGG 0.469435 2:+65162254 MsG0280010131.01.T01:CDS
AGCTATAGCATAGTGATGTT+GGG 0.470720 2:+65162880 MsG0280010131.01.T01:three_prime_UTR
ATTGATACAAGAGGTATGTT+GGG 0.473241 2:-65163636 None:intergenic
TACTATGTTGTCACTTCTTG+CGG 0.473315 2:+65162906 MsG0280010131.01.T01:three_prime_UTR
TAACTCAATTCTAGTAAAGC+AGG 0.481235 2:+65162385 MsG0280010131.01.T01:three_prime_UTR
ATCTTCAAGATTCTTGGTCC+AGG 0.484678 2:+65157774 MsG0280010131.01.T01:CDS
GGAGAATCATATTTGGCTGC+TGG 0.485636 2:+65157741 MsG0280010131.01.T01:CDS
ATAAATACAAATTATTAATA+CGG 0.486174 2:-65157186 None:intergenic
AATAATTTGTATTTATGCAT+AGG 0.490256 2:+65157193 MsG0280010131.01.T01:five_prime_UTR
GGCAATTGTTTGTATGTGAT+GGG 0.492258 2:+65163568 MsG0280010131.01.T01:three_prime_UTR
GGGAAGATGTGAGAAGGTAA+TGG 0.509851 2:+65162820 MsG0280010131.01.T01:three_prime_UTR
CCTCACTACTTTCTCTAACT+CGG 0.512226 2:-65162240 None:intergenic
CTGATAAAGATGCTATCAAA+AGG 0.515493 2:+65162073 MsG0280010131.01.T01:CDS
TTGAACATCATCAACTCCAT+TGG 0.520575 2:-65157546 None:intergenic
TTCTCTAAAATTGTAGCCAA+AGG 0.522538 2:-65163004 None:intergenic
ATACTTCTCACAAATGTATG+AGG 0.524832 2:+65163067 MsG0280010131.01.T01:three_prime_UTR
GAGAAAAGAACGTGAACTGA+AGG 0.526065 2:+65161975 MsG0280010131.01.T01:CDS
TCTCTAAAATTGTAGCCAAA+GGG 0.530075 2:-65163003 None:intergenic
CAAAAGATCCTAGCTGAGGA+TGG 0.534878 2:+65160528 MsG0280010131.01.T01:CDS
GGCTAGCTCTTTGATTGCTG+AGG 0.535603 2:-65163030 None:intergenic
GCGCAGGAGTATGCTTCCAC+TGG 0.538014 2:+65158858 MsG0280010131.01.T01:CDS
GGATGTCCACAGAGGAAAAG+TGG 0.542719 2:-65163611 None:intergenic
AGTATTGTAAACAAATGTAT+GGG 0.543326 2:+65157646 MsG0280010131.01.T01:CDS
TTAACAATGATAATGACAAA+GGG 0.543354 2:+65157594 MsG0280010131.01.T01:CDS
AAACCAAAGGGGTGACTGCA+TGG 0.544322 2:+65162852 MsG0280010131.01.T01:three_prime_UTR
CTTAACAATGATAATGACAA+AGG 0.550209 2:+65157593 MsG0280010131.01.T01:CDS
TTCGAGCAAGTTGATGGCGA+TGG 0.551497 2:+65162197 MsG0280010131.01.T01:CDS
CGAGTTAGAGAAAGTAGTGA+GGG 0.552437 2:+65162241 MsG0280010131.01.T01:CDS
ATACAAGAGGTATGTTGGGA+AGG 0.558531 2:-65163632 None:intergenic
TATATATGAGAGATATCACT+TGG 0.563447 2:+65163519 MsG0280010131.01.T01:three_prime_UTR
TTCAGCTGATGTATTGGTGG+TGG 0.569076 2:+65163547 MsG0280010131.01.T01:three_prime_UTR
CTAACTCGGATCTTGAAACA+TGG 0.570677 2:-65162226 None:intergenic
TAGGAGTTCCATCCTCAGCT+AGG 0.570837 2:-65160536 None:intergenic
CCAAGAATGTTATTAGAACA+TGG 0.576847 2:-65157675 None:intergenic
AAGTGATAAGGAGAGTGCGC+AGG 0.577150 2:+65158842 MsG0280010131.01.T01:CDS
CAGCCAAATATGATTCTCCA+TGG 0.577212 2:-65157737 None:intergenic
CCGAGTTAGAGAAAGTAGTG+AGG 0.583038 2:+65162240 MsG0280010131.01.T01:CDS
ACCAATGATATTGATACAAG+AGG 0.588292 2:-65163645 None:intergenic
GGATAGAAAGTACCTCCCTA+AGG 0.588674 2:+65161579 MsG0280010131.01.T01:intron
GGTAGGATGCTCAATGATGA+TGG 0.588759 2:+65162045 MsG0280010131.01.T01:CDS
TGAATCTTCTTCTAATCCAG+AGG 0.591703 2:+65157623 MsG0280010131.01.T01:CDS
GAAGAATTAAGGATTCAGGA+AGG 0.595239 2:-65157833 None:intergenic
TTGCGGAACCTCTAATAGCA+AGG 0.597805 2:+65162923 MsG0280010131.01.T01:three_prime_UTR
AAGAATTAAGGATTCAGGAA+GGG 0.601558 2:-65157832 None:intergenic
TGGTAAGGCTGTAGATGCAG+AGG 0.605117 2:+65162274 MsG0280010131.01.T01:CDS
ATGGAAGAGAATCAAACCAA+AGG 0.619841 2:+65162839 MsG0280010131.01.T01:three_prime_UTR
CATGCTCAGAATGATATGGT+TGG 0.620806 2:+65162024 MsG0280010131.01.T01:CDS
AGAAAAGAACGTGAACTGAA+GGG 0.629208 2:+65161976 MsG0280010131.01.T01:CDS
AGACATGGGAAGATGTGAGA+AGG 0.634561 2:+65162814 MsG0280010131.01.T01:intron
TGTTCATAGATTCCTTAGGG+AGG 0.638172 2:-65161591 None:intergenic
TTGTTGGCATCAGATCATGA+AGG 0.641589 2:-65162312 None:intergenic
CAGCTAACATCCAACTCCAG+TGG 0.644828 2:-65158874 None:intergenic
CTCAGAATGATATGGTTGGT+AGG 0.657908 2:+65162028 MsG0280010131.01.T01:CDS
TCTACAAAAGATCCTAGCTG+AGG 0.670159 2:+65160524 MsG0280010131.01.T01:CDS
GAATCATATTTGGCTGCTGG+AGG 0.671094 2:+65157744 MsG0280010131.01.T01:CDS
GGAAGAGAATCAAACCAAAG+GGG 0.710553 2:+65162841 MsG0280010131.01.T01:three_prime_UTR
ATATATGAGAGATATCACTT+GGG 0.731670 2:+65163520 MsG0280010131.01.T01:three_prime_UTR
AATAGTACATACGAATCACG+TGG 0.748198 2:-65157270 None:intergenic
GTTGGGAAGGATGTCCACAG+AGG 0.762076 2:-65163619 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTTATAATTAAAAAA+GGG - Chr2:65162505-65162524 None:intergenic 0.0%
!! AATAAAATTACCTTATTAAT+TGG - Chr2:65159555-65159574 None:intergenic 10.0%
!! AATTGAGTAATTAATTTATA+TGG - Chr2:65160333-65160352 None:intergenic 10.0%
!! TTATTTGAGAATTTATAAAT+AGG - Chr2:65163372-65163391 None:intergenic 10.0%
!!! AATAACAATTTTTTTACAAA+TGG + Chr2:65162772-65162791 MsG0280010131.01.T01:intron 10.0%
!!! AATTATCAATGATTTTAAAT+AGG + Chr2:65163213-65163232 MsG0280010131.01.T01:intron 10.0%
!!! ATTCTCAAAATTTTAAAATT+AGG + Chr2:65162660-65162679 MsG0280010131.01.T01:intron 10.0%
!!! TTCTCAAAATTTTAAAATTA+GGG + Chr2:65162661-65162680 MsG0280010131.01.T01:intron 10.0%
!! AAAAAAATTATGATAGGTTA+TGG + Chr2:65159847-65159866 MsG0280010131.01.T01:intron 15.0%
!! AAAACATTTATATATACTGT+CGG - Chr2:65162129-65162148 None:intergenic 15.0%
!! AAAAGAAAATTATTATGCAT+TGG - Chr2:65159477-65159496 None:intergenic 15.0%
!! ATAAATACTTATGTAAGATT+TGG + Chr2:65163429-65163448 MsG0280010131.01.T01:intron 15.0%
!! ATCCATTATAAAAATATAAC+CGG + Chr2:65158160-65158179 MsG0280010131.01.T01:intron 15.0%
!! ATTCTTTGATTAATATTTGA+TGG - Chr2:65158578-65158597 None:intergenic 15.0%
!! ATTTATAATTAAAAAAGGGA+AGG - Chr2:65162501-65162520 None:intergenic 15.0%
!! TTAGATATTCATTTCATATA+TGG + Chr2:65157291-65157310 MsG0280010131.01.T01:intron 15.0%
!! TTATTAATAAATGACACTAA+TGG + Chr2:65161094-65161113 MsG0280010131.01.T01:intron 15.0%
!! TTTAAACTAACCAATTAATA+AGG + Chr2:65159542-65159561 MsG0280010131.01.T01:intron 15.0%
!!! AAAATTGCCATTTTTTTAAT+AGG + Chr2:65161015-65161034 MsG0280010131.01.T01:intron 15.0%
!!! AAATTGCCATTTTTTTAATA+GGG + Chr2:65161016-65161035 MsG0280010131.01.T01:intron 15.0%
!!! AAGGTAATTTTATTCTTTTA+AGG + Chr2:65159561-65159580 MsG0280010131.01.T01:intron 15.0%
!!! AATAATTTGTATTTATGCAT+AGG + Chr2:65157193-65157212 MsG0280010131.01.T01:five_prime_UTR 15.0%
!!! AGAAAAACCAATTTTAAATT+CGG - Chr2:65158202-65158221 None:intergenic 15.0%
!!! AGGTAATTTTATTCTTTTAA+GGG + Chr2:65159562-65159581 MsG0280010131.01.T01:intron 15.0%
!!! ATTTTTTTACAAATGGTATA+TGG + Chr2:65162779-65162798 MsG0280010131.01.T01:intron 15.0%
!!! CTTTTGAAACAAAATTTTTT+TGG - Chr2:65159437-65159456 None:intergenic 15.0%
!!! GTAATATATATTTTTTTGAG+AGG - Chr2:65157380-65157399 None:intergenic 15.0%
!!! TAAAAAAATCTATTCTAGTT+TGG - Chr2:65158533-65158552 None:intergenic 15.0%
!!! TATTAAAAAAATGGCAATTT+TGG - Chr2:65161016-65161035 None:intergenic 15.0%
!!! TATTAATTGGTTAGTTTAAA+AGG - Chr2:65159542-65159561 None:intergenic 15.0%
!!! TTAATTACGTTTTTTTAGTT+TGG + Chr2:65163343-65163362 MsG0280010131.01.T01:intron 15.0%
!!! TTATAAACCGAATTTAAAAT+TGG + Chr2:65158192-65158211 MsG0280010131.01.T01:intron 15.0%
!!! TTTGTAACACTTAATATTTT+AGG + Chr2:65160142-65160161 MsG0280010131.01.T01:intron 15.0%
!! AAAAATTCACATTGAATTTC+AGG + Chr2:65162552-65162571 MsG0280010131.01.T01:intron 20.0%
!! AACTTGGTTGTATATTATAA+TGG - Chr2:65160107-65160126 None:intergenic 20.0%
!! AATGAAGAGAAAAAAAAAGA+AGG - Chr2:65158376-65158395 None:intergenic 20.0%
!! AGATTAACTTAAATGCAAAT+AGG - Chr2:65160055-65160074 None:intergenic 20.0%
!! AGTATTGTAAACAAATGTAT+GGG + Chr2:65157646-65157665 MsG0280010131.01.T01:CDS 20.0%
!! AGTTATTGAATAAAGGAATA+AGG - Chr2:65162452-65162471 None:intergenic 20.0%
!! ATACAATAGTAATTGGAATT+GGG + Chr2:65160294-65160313 MsG0280010131.01.T01:intron 20.0%
!! ATACTAAATGTTTAACTCTA+TGG - Chr2:65163405-65163424 None:intergenic 20.0%
!! ATATACAACCAAGTTTAAAA+TGG + Chr2:65160112-65160131 MsG0280010131.01.T01:intron 20.0%
!! ATCATATTTCTCTTATGTTA+GGG - Chr2:65160903-65160922 None:intergenic 20.0%
!! ATCATTGAATTTCTAATTGT+GGG + Chr2:65159742-65159761 MsG0280010131.01.T01:intron 20.0%
!! ATTCTTCTTTGGTTATAATT+TGG - Chr2:65161514-65161533 None:intergenic 20.0%
!! GATCAAGTGAAAAAAAAAAA+TGG - Chr2:65162752-65162771 None:intergenic 20.0%
!! GTTATTGAATAAAGGAATAA+GGG - Chr2:65162451-65162470 None:intergenic 20.0%
!! TAAATGAGTCAAAAATTAAG+TGG + Chr2:65162629-65162648 MsG0280010131.01.T01:intron 20.0%
!! TAATAGTTATCACTTCTTTA+AGG + Chr2:65160756-65160775 MsG0280010131.01.T01:intron 20.0%
!! TAGAAATTCAATGATAAAGA+AGG - Chr2:65159737-65159756 None:intergenic 20.0%
!! TATACAATAGTAATTGGAAT+TGG + Chr2:65160293-65160312 MsG0280010131.01.T01:intron 20.0%
!! TATCATTGAATTTCTAATTG+TGG + Chr2:65159741-65159760 MsG0280010131.01.T01:intron 20.0%
!! TTATGCAAGTTATTGAATAA+AGG - Chr2:65162459-65162478 None:intergenic 20.0%
!! TTGAATTACCACTAAAATAA+AGG + Chr2:65158470-65158489 MsG0280010131.01.T01:intron 20.0%
!! TTGTCTTGATATCAAAATTA+AGG - Chr2:65163783-65163802 None:intergenic 20.0%
!!! AACCGGTTATATTTTTATAA+TGG - Chr2:65158165-65158184 None:intergenic 20.0%
!!! AAGAATACCTCTTTTTTTTA+AGG + Chr2:65158592-65158611 MsG0280010131.01.T01:intron 20.0%
!!! AATGGATTTTTTTATAAACC+TGG - Chr2:65158147-65158166 None:intergenic 20.0%
!!! AATTGCCATTTTTTTAATAG+GGG + Chr2:65161017-65161036 MsG0280010131.01.T01:intron 20.0%
!!! ACATACACATTTTTTTTTAG+AGG + Chr2:65158690-65158709 MsG0280010131.01.T01:intron 20.0%
!!! AGAATACCTCTTTTTTTTAA+GGG + Chr2:65158593-65158612 MsG0280010131.01.T01:intron 20.0%
!!! AGTGTCATTTATTAATAACA+AGG - Chr2:65161092-65161111 None:intergenic 20.0%
!!! ATATATATTTTTTTGAGAGG+TGG - Chr2:65157377-65157396 None:intergenic 20.0%
!!! ATTGCAACATTTTAAAACTT+AGG - Chr2:65160816-65160835 None:intergenic 20.0%
!!! CTTTCAAATAATTTGCAATA+AGG - Chr2:65163287-65163306 None:intergenic 20.0%
!!! GTTTTAAAATGTTGCAATTT+TGG + Chr2:65160818-65160837 MsG0280010131.01.T01:intron 20.0%
!!! TGATATGGTTCATAATTTTA+GGG + Chr2:65157225-65157244 MsG0280010131.01.T01:five_prime_UTR 20.0%
!!! TTAAAAGCTTTTGACAAAAA+TGG + Chr2:65161485-65161504 MsG0280010131.01.T01:intron 20.0%
!!! TTAACAATGATAATGACAAA+GGG + Chr2:65157594-65157613 MsG0280010131.01.T01:CDS 20.0%
!!! TTAATTTTGATATCAAGACA+AGG + Chr2:65163782-65163801 MsG0280010131.01.T01:three_prime_UTR 20.0%
!!! TTAATTTTGATATCAAGCTA+AGG + Chr2:65163712-65163731 MsG0280010131.01.T01:three_prime_UTR 20.0%
!!! TTAGCTTGATATCAAAATTA+AGG - Chr2:65163713-65163732 None:intergenic 20.0%
!!! TTCTAAAAAAGTTGCAATTA+TGG + Chr2:65160939-65160958 MsG0280010131.01.T01:intron 20.0%
!!! TTGATATGGTTCATAATTTT+AGG + Chr2:65157224-65157243 MsG0280010131.01.T01:five_prime_UTR 20.0%
!!! TTGCAACATTTTAAAACTTA+GGG - Chr2:65160815-65160834 None:intergenic 20.0%
!!! TTTGCCATTTTTTTAATAGA+AGG - Chr2:65160844-65160863 None:intergenic 20.0%
!!! TTTTCATAAATTTCACCAAT+GGG - Chr2:65162532-65162551 None:intergenic 20.0%
!!! TTTTTCATAAATTTCACCAA+TGG - Chr2:65162533-65162552 None:intergenic 20.0%
! ACTATTATCATAAACTATCC+TGG - Chr2:65160743-65160762 None:intergenic 25.0%
! ACTTATATGATAAGCACTAT+AGG + Chr2:65161286-65161305 MsG0280010131.01.T01:intron 25.0%
! AGTTTAAAAGGAATACTAAG+TGG - Chr2:65159530-65159549 None:intergenic 25.0%
! ATAAAATCAATTTCTCCATG+AGG - Chr2:65161201-65161220 None:intergenic 25.0%
! ATAATTCACTAAAACGACTA+TGG + Chr2:65162475-65162494 MsG0280010131.01.T01:intron 25.0%
! ATATATGAGAGATATCACTT+GGG + Chr2:65163520-65163539 MsG0280010131.01.T01:three_prime_UTR 25.0%
! ATCTATGAACAAAATGTATC+AGG + Chr2:65161603-65161622 MsG0280010131.01.T01:CDS 25.0%
! CATTCTCAAATTTAGAAACA+TGG + Chr2:65162688-65162707 MsG0280010131.01.T01:intron 25.0%
! CCATTGGAAATCAATTTATT+GGG - Chr2:65157533-65157552 None:intergenic 25.0%
! GACATTTAGCATGTAAAATA+TGG - Chr2:65158501-65158520 None:intergenic 25.0%
! GATCATATTTCTCTTATGTT+AGG - Chr2:65160904-65160923 None:intergenic 25.0%
! TAACATATAACAATCATGTC+AGG - Chr2:65161648-65161667 None:intergenic 25.0%
! TATAGTGCTTATCATATAAG+TGG - Chr2:65161287-65161306 None:intergenic 25.0%
! TATATATGAGAGATATCACT+TGG + Chr2:65163519-65163538 MsG0280010131.01.T01:three_prime_UTR 25.0%
! TATTAATACGGACATGAAAT+TGG - Chr2:65157177-65157196 None:intergenic 25.0%
! TCAATTTATTGGGAAGAAAA+CGG - Chr2:65157523-65157542 None:intergenic 25.0%
! TCATATTTCTCTTATGTTAG+GGG - Chr2:65160902-65160921 None:intergenic 25.0%
! TCCAACTATACAATAGTAAT+TGG + Chr2:65160287-65160306 MsG0280010131.01.T01:intron 25.0%
! TCCAATTACTATTGTATAGT+TGG - Chr2:65160291-65160310 None:intergenic 25.0%
! TCCATTGGAAATCAATTTAT+TGG - Chr2:65157534-65157553 None:intergenic 25.0%
! TCTGATATATACAGTTAAGA+GGG - Chr2:65158669-65158688 None:intergenic 25.0%
! TGAAGTTCAATTCTTCAATT+AGG + Chr2:65159362-65159381 MsG0280010131.01.T01:intron 25.0%
! TTAAGGGAATCAAATAATAG+TGG + Chr2:65158609-65158628 MsG0280010131.01.T01:intron 25.0%
! TTATTTAGTATGCTAAAGAG+TGG + Chr2:65159696-65159715 MsG0280010131.01.T01:intron 25.0%
! TTGATTCCCTTAAAAAAAAG+AGG - Chr2:65158602-65158621 None:intergenic 25.0%
! TTTCATAAATTTCACCAATG+GGG - Chr2:65162531-65162550 None:intergenic 25.0%
!! AAATAATTTGCAATAAGGTG+GGG - Chr2:65163282-65163301 None:intergenic 25.0%
!! AACAACTTCCATTTTAAACT+TGG - Chr2:65160123-65160142 None:intergenic 25.0%
!! AATAAGTTGAAAACAACTGA+TGG + Chr2:65161820-65161839 MsG0280010131.01.T01:intron 25.0%
!! ATTTTGTTCATAGATTCCTT+AGG - Chr2:65161598-65161617 None:intergenic 25.0%
!! CAAATAATTTGCAATAAGGT+GGG - Chr2:65163283-65163302 None:intergenic 25.0%
!! CTTAACAATGATAATGACAA+AGG + Chr2:65157593-65157612 MsG0280010131.01.T01:CDS 25.0%
!! GAGTATTGTAAACAAATGTA+TGG + Chr2:65157645-65157664 MsG0280010131.01.T01:CDS 25.0%
!! GGAATATTTCAACTGATTTA+AGG + Chr2:65160594-65160613 MsG0280010131.01.T01:intron 25.0%
!! TATTTTACATGCTAAATGTC+CGG + Chr2:65158501-65158520 MsG0280010131.01.T01:intron 25.0%
!! TCAAATAATTTGCAATAAGG+TGG - Chr2:65163284-65163303 None:intergenic 25.0%
!! TGTATCAATATCATTGGTTA+TGG + Chr2:65163650-65163669 MsG0280010131.01.T01:three_prime_UTR 25.0%
!! TGTCTCTTAAGTTTTTCTTT+AGG + Chr2:65157333-65157352 MsG0280010131.01.T01:five_prime_UTR 25.0%
!! TTGGCCTTCTATTAAAAAAA+TGG + Chr2:65160837-65160856 MsG0280010131.01.T01:intron 25.0%
!! TTTTGTTCATAGATTCCTTA+GGG - Chr2:65161597-65161616 None:intergenic 25.0%
!!! AACTTCACTATTTTTATCCT+TGG + Chr2:65163114-65163133 MsG0280010131.01.T01:intron 25.0%
!!! ACAAAAAATGAAGTTGATGT+GGG - Chr2:65158792-65158811 None:intergenic 25.0%
!!! ATAAGTGTCTCTTTTTTTTG+AGG + Chr2:65158552-65158571 MsG0280010131.01.T01:intron 25.0%
!!! ATTGCCATTTTTTTAATAGG+GGG + Chr2:65161018-65161037 MsG0280010131.01.T01:intron 25.0%
!!! CAACTTTTTTAGAAGATAAG+TGG - Chr2:65160933-65160952 None:intergenic 25.0%
!!! GAAATTGAACTTTTTTCTTG+AGG + Chr2:65161142-65161161 MsG0280010131.01.T01:intron 25.0%
!!! GAAGTATTACTACTTTTTTG+TGG - Chr2:65163054-65163073 None:intergenic 25.0%
!!! TAAAATTGGTTTTTCTCTTG+TGG + Chr2:65158206-65158225 MsG0280010131.01.T01:intron 25.0%
!!! TAAACACACTCATTTTGAAA+CGG + Chr2:65159772-65159791 MsG0280010131.01.T01:intron 25.0%
!!! TACAAAAAATGAAGTTGATG+TGG - Chr2:65158793-65158812 None:intergenic 25.0%
!!! TATAAACCTGGTTTTCAAAA+AGG - Chr2:65158135-65158154 None:intergenic 25.0%
!!! TGCAACATTTTAAAACTTAG+GGG - Chr2:65160814-65160833 None:intergenic 25.0%
!!! TGGTCATTTATTTCTGATTT+TGG + Chr2:65157695-65157714 MsG0280010131.01.T01:CDS 25.0%
!!! TTTTAAGGGAAATGTTAACT+AGG + Chr2:65159576-65159595 MsG0280010131.01.T01:intron 25.0%
AACTGAGAAAAGAGAAATAG+TGG - Chr2:65157407-65157426 None:intergenic 30.0%
AACTTCATGTATGAATGCAT+AGG - Chr2:65159349-65159368 None:intergenic 30.0%
AAGAATTAAGGATTCAGGAA+GGG - Chr2:65157835-65157854 None:intergenic 30.0%
AAGCATACCAAGAAGAATTA+AGG - Chr2:65157847-65157866 None:intergenic 30.0%
ACCAATGATATTGATACAAG+AGG - Chr2:65163648-65163667 None:intergenic 30.0%
ACCTCTTGTATCAATATCAT+TGG + Chr2:65163644-65163663 MsG0280010131.01.T01:three_prime_UTR 30.0%
ACTAATTTCGTTGTCTTTGT+TGG - Chr2:65162331-65162350 None:intergenic 30.0%
AGAGCATATTTCCCTAAATA+AGG - Chr2:65160873-65160892 None:intergenic 30.0%
AGCATATTTCCCTAAATAAG+GGG - Chr2:65160871-65160890 None:intergenic 30.0%
ATACTTCTCACAAATGTATG+AGG + Chr2:65163067-65163086 MsG0280010131.01.T01:three_prime_UTR 30.0%
ATATACAGTTAAGAGGGAAT+AGG - Chr2:65158663-65158682 None:intergenic 30.0%
ATGAGTCAAAAATTAAGTGG+TGG + Chr2:65162632-65162651 MsG0280010131.01.T01:intron 30.0%
ATTATCATAAACTATCCTGG+AGG - Chr2:65160740-65160759 None:intergenic 30.0%
ATTTGGTCAATGCAGATTTA+TGG + Chr2:65163446-65163465 MsG0280010131.01.T01:intron 30.0%
ATTTGTTTACAATACTCCTC+TGG - Chr2:65157642-65157661 None:intergenic 30.0%
CATATTTCTCTTATGTTAGG+GGG - Chr2:65160901-65160920 None:intergenic 30.0%
CATGATGAAGTACACTATTA+GGG - Chr2:65161342-65161361 None:intergenic 30.0%
CCAAGAATGTTATTAGAACA+TGG - Chr2:65157678-65157697 None:intergenic 30.0%
CCATGTTCTAATAACATTCT+TGG + Chr2:65157675-65157694 MsG0280010131.01.T01:CDS 30.0%
CTAGAATTGAGTTATCCATT+TGG - Chr2:65162379-65162398 None:intergenic 30.0%
CTGATAAAGATGCTATCAAA+AGG + Chr2:65162073-65162092 MsG0280010131.01.T01:CDS 30.0%
GAACAAATCTTCAAGATTCT+TGG + Chr2:65157768-65157787 MsG0280010131.01.T01:CDS 30.0%
GAGCATATTTCCCTAAATAA+GGG - Chr2:65160872-65160891 None:intergenic 30.0%
GGATGATGTTTATTAGACAT+GGG + Chr2:65162800-65162819 MsG0280010131.01.T01:intron 30.0%
GGTTATACGTAGAAAACTAA+GGG - Chr2:65161321-65161340 None:intergenic 30.0%
GTCTGATATATACAGTTAAG+AGG - Chr2:65158670-65158689 None:intergenic 30.0%
GTGTTTATGAACAACATTCT+TGG + Chr2:65163473-65163492 MsG0280010131.01.T01:three_prime_UTR 30.0%
GTTTCAAAATGTTGCGAATT+TGG - Chr2:65161044-65161063 None:intergenic 30.0%
TAAAGAGCTGCATATTTCAT+TGG - Chr2:65160421-65160440 None:intergenic 30.0%
TAACTCAATTCTAGTAAAGC+AGG + Chr2:65162385-65162404 MsG0280010131.01.T01:three_prime_UTR 30.0%
TATAAATTATAGTCCCCCAT+TGG + Chr2:65162514-65162533 MsG0280010131.01.T01:intron 30.0%
TATACAGTTAAGAGGGAATA+GGG - Chr2:65158662-65158681 None:intergenic 30.0%
TCATCTCATATTCATTTACC+AGG + Chr2:65160013-65160032 MsG0280010131.01.T01:intron 30.0%
TGGATGATGTTTATTAGACA+TGG + Chr2:65162799-65162818 MsG0280010131.01.T01:intron 30.0%
TGTATTTATGCATAGGTAGA+TGG + Chr2:65157200-65157219 MsG0280010131.01.T01:five_prime_UTR 30.0%
TTCATAAATTTCACCAATGG+GGG - Chr2:65162530-65162549 None:intergenic 30.0%
! AGAATAAAACAAGCTTTGAC+TGG + Chr2:65159003-65159022 MsG0280010131.01.T01:intron 30.0%
! ATTGATACAAGAGGTATGTT+GGG - Chr2:65163639-65163658 None:intergenic 30.0%
! CCCAATAAATTGATTTCCAA+TGG + Chr2:65157530-65157549 MsG0280010131.01.T01:exon 30.0%
! CGGTTTATAATTTTGTGAAC+CGG - Chr2:65158182-65158201 None:intergenic 30.0%
! CTTTTAACATGTCTGCTATT+TGG - Chr2:65161472-65161491 None:intergenic 30.0%
! TAGTTATCACTTCTTTAAGG+AGG + Chr2:65160759-65160778 MsG0280010131.01.T01:intron 30.0%
! TATTGATACAAGAGGTATGT+TGG - Chr2:65163640-65163659 None:intergenic 30.0%
! TGTGCAAAGTATTAATTGTG+AGG - Chr2:65159507-65159526 None:intergenic 30.0%
! TTCTTCCATTTGATGATATG+AGG - Chr2:65158987-65159006 None:intergenic 30.0%
! TTTAAGGAGGAGTTGTTATT+AGG + Chr2:65160772-65160791 MsG0280010131.01.T01:intron 30.0%
!! AAGCGACACTCATTTTAAAA+CGG - Chr2:65159412-65159431 None:intergenic 30.0%
!! ACCAAAGAAGAATTTGTTAG+TGG + Chr2:65161521-65161540 MsG0280010131.01.T01:intron 30.0%
!! AGTGAGAATGAATTTGTTGA+TGG + Chr2:65162348-65162367 MsG0280010131.01.T01:three_prime_UTR 30.0%
!! CTTTTGATAGCATCTTTATC+AGG - Chr2:65162075-65162094 None:intergenic 30.0%
!! TCTCTAAAATTGTAGCCAAA+GGG - Chr2:65163006-65163025 None:intergenic 30.0%
!! TGTTTGTGATTTGTTGATAG+TGG - Chr2:65159150-65159169 None:intergenic 30.0%
!! TTCAATCCTTTTTGAAAACC+AGG + Chr2:65158126-65158145 MsG0280010131.01.T01:intron 30.0%
!! TTCTCTAAAATTGTAGCCAA+AGG - Chr2:65163007-65163026 None:intergenic 30.0%
!!! TTTTTGAACCTTGCTATTAG+AGG - Chr2:65162934-65162953 None:intergenic 30.0%
AAATCTGACTCACCCATTTA+TGG - Chr2:65160571-65160590 None:intergenic 35.0%
AACTGATGCAATCTCAATCT+CGG + Chr2:65160182-65160201 MsG0280010131.01.T01:intron 35.0%
AAGCTATAGCATAGTGATGT+TGG + Chr2:65162879-65162898 MsG0280010131.01.T01:three_prime_UTR 35.0%
AAGTCATGCTCAGAATGATA+TGG + Chr2:65162020-65162039 MsG0280010131.01.T01:CDS 35.0%
AATAGTACATACGAATCACG+TGG - Chr2:65157273-65157292 None:intergenic 35.0%
AATAGTGTACTTCATCATGC+AGG + Chr2:65161343-65161362 MsG0280010131.01.T01:intron 35.0%
ACGTAGTAAGACGTGTATTA+AGG - Chr2:65159060-65159079 None:intergenic 35.0%
AGAAAAGAACGTGAACTGAA+GGG + Chr2:65161976-65161995 MsG0280010131.01.T01:CDS 35.0%
AGCTATAGCATAGTGATGTT+GGG + Chr2:65162880-65162899 MsG0280010131.01.T01:three_prime_UTR 35.0%
AGCTCAAAATCTTCTTCTCA+TGG + Chr2:65162409-65162428 MsG0280010131.01.T01:three_prime_UTR 35.0%
AGTAGATCTGCATTATAGAG+TGG - Chr2:65159928-65159947 None:intergenic 35.0%
ATGCAAATAGGAGTAGTGAA+AGG - Chr2:65160043-65160062 None:intergenic 35.0%
ATGGAAGAGAATCAAACCAA+AGG + Chr2:65162839-65162858 MsG0280010131.01.T01:three_prime_UTR 35.0%
CAATAGTAATTGGAATTGGG+AGG + Chr2:65160297-65160316 MsG0280010131.01.T01:intron 35.0%
CATTTCATATATGGCCATGA+AGG + Chr2:65157300-65157319 MsG0280010131.01.T01:intron 35.0%
CCAAGAAGAATTAAGGATTC+AGG - Chr2:65157840-65157859 None:intergenic 35.0%
CCTGAATCCTTAATTCTTCT+TGG + Chr2:65157837-65157856 MsG0280010131.01.T01:CDS 35.0%
CGTAGTAAGACGTGTATTAA+GGG - Chr2:65159059-65159078 None:intergenic 35.0%
CTAATGTAGCTGCCATAAAT+GGG + Chr2:65160556-65160575 MsG0280010131.01.T01:CDS 35.0%
CTGTACCTCATATCATCAAA+TGG + Chr2:65158979-65158998 MsG0280010131.01.T01:intron 35.0%
GAAGAATTAAGGATTCAGGA+AGG - Chr2:65157836-65157855 None:intergenic 35.0%
GAAGTAAAAGAGTTGTTGCT+TGG + Chr2:65161414-65161433 MsG0280010131.01.T01:intron 35.0%
GAATAACCTATTGCATCACA+AGG - Chr2:65162180-65162199 None:intergenic 35.0%
GACAATTCATTAAGCCTTCA+TGG - Chr2:65157317-65157336 None:intergenic 35.0%
GCATGATGAAGTACACTATT+AGG - Chr2:65161343-65161362 None:intergenic 35.0%
GCCACTAACAAATTCTTCTT+TGG - Chr2:65161525-65161544 None:intergenic 35.0%
GGATATAGACACTAGAAAGA+TGG + Chr2:65159878-65159897 MsG0280010131.01.T01:intron 35.0%
GGCAATTGTTTGTATGTGAT+GGG + Chr2:65163568-65163587 MsG0280010131.01.T01:three_prime_UTR 35.0%
GGGTTATACGTAGAAAACTA+AGG - Chr2:65161322-65161341 None:intergenic 35.0%
GTTCCATGGAGAATCATATT+TGG + Chr2:65157734-65157753 MsG0280010131.01.T01:CDS 35.0%
TACCATGAATTCAGTCAACA+TGG + Chr2:65161369-65161388 MsG0280010131.01.T01:intron 35.0%
TAGAAAGATGGCAAGAATCA+TGG + Chr2:65159890-65159909 MsG0280010131.01.T01:intron 35.0%
TAGTGAAGTTAGACTGAGAT+AGG - Chr2:65163104-65163123 None:intergenic 35.0%
TCCTCATAGTATGTAAACCA+AGG - Chr2:65163134-65163153 None:intergenic 35.0%
TCCTTGGTTTACATACTATG+AGG + Chr2:65163130-65163149 MsG0280010131.01.T01:intron 35.0%
TCTCTTTCATTTAGTCCCTT+TGG + Chr2:65162988-65163007 MsG0280010131.01.T01:three_prime_UTR 35.0%
TGAATCTTCTTCTAATCCAG+AGG + Chr2:65157623-65157642 MsG0280010131.01.T01:CDS 35.0%
TGCAAATAGGAGTAGTGAAA+GGG - Chr2:65160042-65160061 None:intergenic 35.0%
TGGAAGAGAATCAAACCAAA+GGG + Chr2:65162840-65162859 MsG0280010131.01.T01:three_prime_UTR 35.0%
TGGCAATTGTTTGTATGTGA+TGG + Chr2:65163567-65163586 MsG0280010131.01.T01:three_prime_UTR 35.0%
TTAACCAACAAAGCATGCTT+TGG + Chr2:65161558-65161577 MsG0280010131.01.T01:intron 35.0%
TTGAACATCATCAACTCCAT+TGG - Chr2:65157549-65157568 None:intergenic 35.0%
TTGGCCCCCTATTAAAAAAA+TGG - Chr2:65161025-65161044 None:intergenic 35.0%
! AACAGACTTTTATCAAGCCA+TGG + Chr2:65161941-65161960 MsG0280010131.01.T01:intron 35.0%
! ATTTTCAGCTGATGTATTGG+TGG + Chr2:65163544-65163563 MsG0280010131.01.T01:three_prime_UTR 35.0%
! GCTAGTGCTTTTGATATTCT+TGG + Chr2:65157807-65157826 MsG0280010131.01.T01:CDS 35.0%
! GGAATTTTCAGCTGATGTAT+TGG + Chr2:65163541-65163560 MsG0280010131.01.T01:three_prime_UTR 35.0%
! TACTATGTTGTCACTTCTTG+CGG + Chr2:65162906-65162925 MsG0280010131.01.T01:three_prime_UTR 35.0%
! TTTAAAACGGAGGGAGTTAA+AGG - Chr2:65159399-65159418 None:intergenic 35.0%
!! CATAGGTAGATGGATTGATA+TGG + Chr2:65157210-65157229 MsG0280010131.01.T01:five_prime_UTR 35.0%
!! TATGAGTACTTGTTGTTCCA+TGG + Chr2:65157720-65157739 MsG0280010131.01.T01:CDS 35.0%
!!! AGTCTTGTTTTCTCAATCTG+AGG - Chr2:65160446-65160465 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - Chr2:65159408-65159427 None:intergenic 35.0%
!!! TGGCATCACCTTTATTTTAG+TGG - Chr2:65158481-65158500 None:intergenic 35.0%
!!! TTCGCAACATTTTGAAACCT+AGG + Chr2:65161046-65161065 MsG0280010131.01.T01:intron 35.0%
AATGGGTGAGTCAGATTTCA+TGG + Chr2:65160573-65160592 MsG0280010131.01.T01:intron 40.0%
ACTTAAACTCTCAGCAGACT+TGG + Chr2:65158027-65158046 MsG0280010131.01.T01:intron 40.0%
AGTTAAGAGGGAATAGGGAT+AGG - Chr2:65158657-65158676 None:intergenic 40.0%
ATCTTCAAGATTCTTGGTCC+AGG + Chr2:65157774-65157793 MsG0280010131.01.T01:CDS 40.0%
CAGCCAAATATGATTCTCCA+TGG - Chr2:65157740-65157759 None:intergenic 40.0%
CATGAATTCAGTCAACATGG+CGG + Chr2:65161372-65161391 MsG0280010131.01.T01:intron 40.0%
CATGCTCAGAATGATATGGT+TGG + Chr2:65162024-65162043 MsG0280010131.01.T01:CDS 40.0%
CCATTTATGGCAGCTACATT+AGG - Chr2:65160558-65160577 None:intergenic 40.0%
CCTAATGTAGCTGCCATAAA+TGG + Chr2:65160555-65160574 MsG0280010131.01.T01:CDS 40.0%
CCTCACTACTTTCTCTAACT+CGG - Chr2:65162243-65162262 None:intergenic 40.0%
CGAGTTAGAGAAAGTAGTGA+GGG + Chr2:65162241-65162260 MsG0280010131.01.T01:CDS 40.0%
CTAACTCGGATCTTGAAACA+TGG - Chr2:65162229-65162248 None:intergenic 40.0%
CTATCCAAAGCATGCTTTGT+TGG - Chr2:65161565-65161584 None:intergenic 40.0%
CTCAGAATGATATGGTTGGT+AGG + Chr2:65162028-65162047 MsG0280010131.01.T01:CDS 40.0%
GAGAAAAGAACGTGAACTGA+AGG + Chr2:65161975-65161994 MsG0280010131.01.T01:CDS 40.0%
GCAAATAGGAGTAGTGAAAG+GGG - Chr2:65160041-65160060 None:intergenic 40.0%
GCATGATGAGAGAAACTTCA+AGG - Chr2:65159983-65160002 None:intergenic 40.0%
GGAAGAGAATCAAACCAAAG+GGG + Chr2:65162841-65162860 MsG0280010131.01.T01:three_prime_UTR 40.0%
GTCCTCTCTGATATTTGTGT+CGG - Chr2:65161450-65161469 None:intergenic 40.0%
GTTAAGAGGGAATAGGGATA+GGG - Chr2:65158656-65158675 None:intergenic 40.0%
TCTACAAAAGATCCTAGCTG+AGG + Chr2:65160524-65160543 MsG0280010131.01.T01:CDS 40.0%
TGATAGGTTATGGCATGACA+TGG + Chr2:65159857-65159876 MsG0280010131.01.T01:intron 40.0%
TGTTCATAGATTCCTTAGGG+AGG - Chr2:65161594-65161613 None:intergenic 40.0%
TTGCAATAAGGTGGGGTTTA+TGG - Chr2:65163275-65163294 None:intergenic 40.0%
TTGCTTGCCAACAATAACAC+AGG - Chr2:65158936-65158955 None:intergenic 40.0%
TTGTTGGCATCAGATCATGA+AGG - Chr2:65162315-65162334 None:intergenic 40.0%
TTTCTCACGTGTTCAATCCA+TGG - Chr2:65161961-65161980 None:intergenic 40.0%
! AGGTTATTCGAGCAAGTTGA+TGG + Chr2:65162191-65162210 MsG0280010131.01.T01:intron 40.0%
! ATACAAGAGGTATGTTGGGA+AGG - Chr2:65163635-65163654 None:intergenic 40.0%
! ATTCTTGGTCCAGGTGTTTT+TGG + Chr2:65157783-65157802 MsG0280010131.01.T01:CDS 40.0%
! CACTGGACTTTCAAGTGATA+AGG + Chr2:65158830-65158849 MsG0280010131.01.T01:CDS 40.0%
! GCAAAGTGACCCCTTATTTA+GGG + Chr2:65160859-65160878 MsG0280010131.01.T01:intron 40.0%
! TGCAATTATGGCCCTGTTTT+GGG + Chr2:65160951-65160970 MsG0280010131.01.T01:intron 40.0%
! TGTTTCTTGTTGTCAGTCAC+TGG + Chr2:65158813-65158832 MsG0280010131.01.T01:intron 40.0%
! TTGCAATTATGGCCCTGTTT+TGG + Chr2:65160950-65160969 MsG0280010131.01.T01:intron 40.0%
!! CAAAAATTCTCTGAAGCTGC+AGG + Chr2:65162948-65162967 MsG0280010131.01.T01:three_prime_UTR 40.0%
!! GAACAACATTCTTGGCTTTG+TGG + Chr2:65163481-65163500 MsG0280010131.01.T01:three_prime_UTR 40.0%
!! TATTCTAGTTTGGCCTCTAC+CGG - Chr2:65158523-65158542 None:intergenic 40.0%
!! TTGTTGATGGCTTCACCAAA+TGG + Chr2:65162361-65162380 MsG0280010131.01.T01:three_prime_UTR 40.0%
!!! ACACACTCATTTTGAAACGG+AGG + Chr2:65159775-65159794 MsG0280010131.01.T01:intron 40.0%
!!! CACACTCATTTTGAAACGGA+GGG + Chr2:65159776-65159795 MsG0280010131.01.T01:intron 40.0%
!!! CGACACTCATTTTAAAACGG+AGG - Chr2:65159409-65159428 None:intergenic 40.0%
!!! GCAACATTTTGAAACCTAGG+AGG + Chr2:65161049-65161068 MsG0280010131.01.T01:intron 40.0%
ACATGCTAAATGTCCGGTAG+AGG + Chr2:65158507-65158526 MsG0280010131.01.T01:intron 45.0%
ACTATCCTGGAGGAGAGTTA+TGG - Chr2:65160730-65160749 None:intergenic 45.0%
AGACATGGGAAGATGTGAGA+AGG + Chr2:65162814-65162833 MsG0280010131.01.T01:intron 45.0%
AGCCGACACAAATATCAGAG+AGG + Chr2:65161445-65161464 MsG0280010131.01.T01:intron 45.0%
CAAAAGATCCTAGCTGAGGA+TGG + Chr2:65160528-65160547 MsG0280010131.01.T01:CDS 45.0%
CCGAGTTAGAGAAAGTAGTG+AGG + Chr2:65162240-65162259 MsG0280010131.01.T01:CDS 45.0%
CGGAGGGAGTTAAAGGATTA+AGG - Chr2:65159392-65159411 None:intergenic 45.0%
CTATCCTGGAGGAGAGTTAT+GGG - Chr2:65160729-65160748 None:intergenic 45.0%
CTGAAGGGACATCTTATCTC+TGG + Chr2:65161991-65162010 MsG0280010131.01.T01:CDS 45.0%
CTTGCTCCTTGTGATGCAAT+AGG + Chr2:65162171-65162190 MsG0280010131.01.T01:intron 45.0%
GAATCATATTTGGCTGCTGG+AGG + Chr2:65157744-65157763 MsG0280010131.01.T01:CDS 45.0%
GGAGAATCATATTTGGCTGC+TGG + Chr2:65157741-65157760 MsG0280010131.01.T01:CDS 45.0%
GGGAAGATGTGAGAAGGTAA+TGG + Chr2:65162820-65162839 MsG0280010131.01.T01:three_prime_UTR 45.0%
GGTAGGATGCTCAATGATGA+TGG + Chr2:65162045-65162064 MsG0280010131.01.T01:CDS 45.0%
TTATCCCATAACTCTCCTCC+AGG + Chr2:65160722-65160741 MsG0280010131.01.T01:intron 45.0%
TTGCGGAACCTCTAATAGCA+AGG + Chr2:65162923-65162942 MsG0280010131.01.T01:three_prime_UTR 45.0%
! CGCCATGTTGACTGAATTCA+TGG - Chr2:65161374-65161393 None:intergenic 45.0%
! CTCAGCAGACTTGGTAAGAT+GGG + Chr2:65158036-65158055 MsG0280010131.01.T01:intron 45.0%
! GCAATTATGGCCCTGTTTTG+GGG + Chr2:65160952-65160971 MsG0280010131.01.T01:intron 45.0%
! GGCAAAGTGACCCCTTATTT+AGG + Chr2:65160858-65160877 MsG0280010131.01.T01:intron 45.0%
! GGCGTCTTCTCAGCAATTTT+GGG + Chr2:65160980-65160999 MsG0280010131.01.T01:intron 45.0%
! GTAGTGAGGGAGACTCATTT+TGG + Chr2:65162254-65162273 MsG0280010131.01.T01:CDS 45.0%
! TCTCAGCAGACTTGGTAAGA+TGG + Chr2:65158035-65158054 MsG0280010131.01.T01:intron 45.0%
! TGGCGTCTTCTCAGCAATTT+TGG + Chr2:65160979-65160998 MsG0280010131.01.T01:intron 45.0%
! TTCAGCTGATGTATTGGTGG+TGG + Chr2:65163547-65163566 MsG0280010131.01.T01:three_prime_UTR 45.0%
!! GAGGGAGACTCATTTTGGTA+AGG + Chr2:65162259-65162278 MsG0280010131.01.T01:CDS 45.0%
!! GGATAGAAAGTACCTCCCTA+AGG + Chr2:65161579-65161598 MsG0280010131.01.T01:intron 45.0%
!! TTCGTTCCACTTTTCCTCTG+TGG + Chr2:65163605-65163624 MsG0280010131.01.T01:three_prime_UTR 45.0%
!!! CAGCAATTTTGGGACGAAAG+CGG + Chr2:65160990-65161009 MsG0280010131.01.T01:intron 45.0%
!! AAAAAAAAAAAAAAATTACA+AGG - Chr2:65158317-65158336 None:intergenic 5.0%
!! AAAAATATTCAAATAATTTA+GGG - Chr2:65163158-65163177 None:intergenic 5.0%
!! AGATTTAAAAAAAAAAAAAA+TGG - Chr2:65158098-65158117 None:intergenic 5.0%
!! ATAAATACAAATTATTAATA+CGG - Chr2:65157189-65157208 None:intergenic 5.0%
!! CTATAATTTATAATTAAAAA+AGG - Chr2:65162506-65162525 None:intergenic 5.0%
!! TAAAAAAATTAATTAATTCA+AGG + Chr2:65163318-65163337 MsG0280010131.01.T01:intron 5.0%
!! TAAAAATATTCAAATAATTT+AGG - Chr2:65163159-65163178 None:intergenic 5.0%
!!! AATTAATTAATTTTTTTAGT+TGG - Chr2:65163316-65163335 None:intergenic 5.0%
!!! ATTAATTAATTTTTTTAGTT+GGG - Chr2:65163315-65163334 None:intergenic 5.0%
!!! TTATTTGAATATTTTTAAAT+AGG + Chr2:65163162-65163181 MsG0280010131.01.T01:intron 5.0%
!!! TTTTTAAAAAAAATTATGAT+AGG + Chr2:65159841-65159860 MsG0280010131.01.T01:intron 5.0%
AAACCAAAGGGGTGACTGCA+TGG + Chr2:65162852-65162871 MsG0280010131.01.T01:three_prime_UTR 50.0%
AAATGTTAACTAGGCCCCCG+GGG + Chr2:65159585-65159604 MsG0280010131.01.T01:intron 50.0%
ACGTGTGAGATGACACCTCA+TGG + Chr2:65161183-65161202 MsG0280010131.01.T01:intron 50.0%
CACAACTGTGAGAAGCAGGA+TGG - Chr2:65158906-65158925 None:intergenic 50.0%
CACTGGAGTTGGATGTTAGC+TGG + Chr2:65158875-65158894 MsG0280010131.01.T01:intron 50.0%
CAGCTAACATCCAACTCCAG+TGG - Chr2:65158877-65158896 None:intergenic 50.0%
CCTGCTTCTCACAGTTGTGT+GGG + Chr2:65158907-65158926 MsG0280010131.01.T01:intron 50.0%
CTGCTTCTCACAGTTGTGTG+GGG + Chr2:65158908-65158927 MsG0280010131.01.T01:intron 50.0%
GAAATGTTAACTAGGCCCCC+GGG + Chr2:65159584-65159603 MsG0280010131.01.T01:intron 50.0%
GAGTATGCTTCCACTGGAGT+TGG + Chr2:65158864-65158883 MsG0280010131.01.T01:intron 50.0%
GCACTAGCACCAAAAACACC+TGG - Chr2:65157795-65157814 None:intergenic 50.0%
GGAAATGTTAACTAGGCCCC+CGG + Chr2:65159583-65159602 MsG0280010131.01.T01:intron 50.0%
GGATGTCCACAGAGGAAAAG+TGG - Chr2:65163614-65163633 None:intergenic 50.0%
TAACCATGCAGTCACCCCTT+TGG - Chr2:65162858-65162877 None:intergenic 50.0%
TAACGTCCTTAACCATGCCC+CGG - Chr2:65159605-65159624 None:intergenic 50.0%
TAGGAGTTCCATCCTCAGCT+AGG - Chr2:65160539-65160558 None:intergenic 50.0%
TCCTGCTTCTCACAGTTGTG+TGG + Chr2:65158906-65158925 MsG0280010131.01.T01:intron 50.0%
TGCTTCTCACAGTTGTGTGG+GGG + Chr2:65158909-65158928 MsG0280010131.01.T01:intron 50.0%
TGGTAAGGCTGTAGATGCAG+AGG + Chr2:65162274-65162293 MsG0280010131.01.T01:CDS 50.0%
! AACTGCACTTTTCGCCTCCT+AGG - Chr2:65161066-65161085 None:intergenic 50.0%
! AAGTGATAAGGAGAGTGCGC+AGG + Chr2:65158842-65158861 MsG0280010131.01.T01:CDS 50.0%
! GGCTAGCTCTTTGATTGCTG+AGG - Chr2:65163033-65163052 None:intergenic 50.0%
! TGGGGGACCTGTGTTATTGT+TGG + Chr2:65158926-65158945 MsG0280010131.01.T01:intron 50.0%
!! TTCGAGCAAGTTGATGGCGA+TGG + Chr2:65162197-65162216 MsG0280010131.01.T01:CDS 50.0%
AACGTCCTTAACCATGCCCC+GGG - Chr2:65159604-65159623 None:intergenic 55.0%
CCCACACAACTGTGAGAAGC+AGG - Chr2:65158910-65158929 None:intergenic 55.0%
GTTGGGAAGGATGTCCACAG+AGG - Chr2:65163622-65163641 None:intergenic 55.0%
ACGCCACGTGCCCCAAAACA+GGG - Chr2:65160965-65160984 None:intergenic 60.0%
ACGTCCTTAACCATGCCCCG+GGG - Chr2:65159603-65159622 None:intergenic 60.0%
! GCGCAGGAGTATGCTTCCAC+TGG + Chr2:65158858-65158877 MsG0280010131.01.T01:CDS 60.0%
!! GGAGTAGTGAAAGGGGCACC+TGG - Chr2:65160034-65160053 None:intergenic 60.0%
CGTCCTTAACCATGCCCCGG+GGG - Chr2:65159602-65159621 None:intergenic 65.0%
GACGCCACGTGCCCCAAAAC+AGG - Chr2:65160966-65160985 None:intergenic 65.0%
TTAACTAGGCCCCCGGGGCA+TGG + Chr2:65159590-65159609 MsG0280010131.01.T01:intron 65.0%
!!! TGGCCCTGTTTTGGGGCACG+TGG + Chr2:65160959-65160978 MsG0280010131.01.T01:intron 65.0%
AGGCCCCCGGGGCATGGTTA+AGG + Chr2:65159596-65159615 MsG0280010131.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 65157131 65163832 65157131 ID=MsG0280010131.01;Name=MsG0280010131.01
Chr2 mRNA 65157131 65163832 65157131 ID=MsG0280010131.01.T01;Parent=MsG0280010131.01;Name=MsG0280010131.01.T01;_AED=0.46;_eAED=0.46;_QI=391|0.75|0.66|1|0.62|0.44|9|761|247
Chr2 exon 65157131 65157284 65157131 ID=MsG0280010131.01.T01:exon:5032;Parent=MsG0280010131.01.T01
Chr2 exon 65157312 65157858 65157312 ID=MsG0280010131.01.T01:exon:5033;Parent=MsG0280010131.01.T01
Chr2 exon 65158829 65158881 65158829 ID=MsG0280010131.01.T01:exon:5034;Parent=MsG0280010131.01.T01
Chr2 exon 65160519 65160577 65160519 ID=MsG0280010131.01.T01:exon:5035;Parent=MsG0280010131.01.T01
Chr2 exon 65161585 65161624 65161585 ID=MsG0280010131.01.T01:exon:5036;Parent=MsG0280010131.01.T01
Chr2 exon 65161946 65162094 65161946 ID=MsG0280010131.01.T01:exon:5037;Parent=MsG0280010131.01.T01
Chr2 exon 65162193 65162441 65162193 ID=MsG0280010131.01.T01:exon:5038;Parent=MsG0280010131.01.T01
Chr2 exon 65162816 65163088 65162816 ID=MsG0280010131.01.T01:exon:5039;Parent=MsG0280010131.01.T01
Chr2 exon 65163461 65163832 65163461 ID=MsG0280010131.01.T01:exon:5040;Parent=MsG0280010131.01.T01
Chr2 five_prime_UTR 65157131 65157284 65157131 ID=MsG0280010131.01.T01:five_prime_utr;Parent=MsG0280010131.01.T01
Chr2 five_prime_UTR 65157312 65157548 65157312 ID=MsG0280010131.01.T01:five_prime_utr;Parent=MsG0280010131.01.T01
Chr2 CDS 65157549 65157858 65157549 ID=MsG0280010131.01.T01:cds;Parent=MsG0280010131.01.T01
Chr2 CDS 65158829 65158881 65158829 ID=MsG0280010131.01.T01:cds;Parent=MsG0280010131.01.T01
Chr2 CDS 65160519 65160577 65160519 ID=MsG0280010131.01.T01:cds;Parent=MsG0280010131.01.T01
Chr2 CDS 65161585 65161624 65161585 ID=MsG0280010131.01.T01:cds;Parent=MsG0280010131.01.T01
Chr2 CDS 65161946 65162094 65161946 ID=MsG0280010131.01.T01:cds;Parent=MsG0280010131.01.T01
Chr2 CDS 65162193 65162325 65162193 ID=MsG0280010131.01.T01:cds;Parent=MsG0280010131.01.T01
Chr2 three_prime_UTR 65162326 65162441 65162326 ID=MsG0280010131.01.T01:three_prime_utr;Parent=MsG0280010131.01.T01
Chr2 three_prime_UTR 65162816 65163088 65162816 ID=MsG0280010131.01.T01:three_prime_utr;Parent=MsG0280010131.01.T01
Chr2 three_prime_UTR 65163461 65163832 65163461 ID=MsG0280010131.01.T01:three_prime_utr;Parent=MsG0280010131.01.T01
Gene Sequence

>MsG0280010131.01.T01

ATGGAGTTGATGATGTTCAATCAGAAGAAGATTCTTATCTACTTCTTAACAATGATAATGACAAAGGGTGTTATTGAATCTTCTTCTAATCCAGAGGAGTATTGTAAACAAATGTATGGGTTTTTGCCATGTTCTAATAACATTCTTGGTCATTTATTTCTGATTTTGGTTTATGAGTACTTGTTGTTCCATGGAGAATCATATTTGGCTGCTGGAGGTGAACAAATCTTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCCCTTCCTGAATCCTTAATTCTTCTTGTCACTGGACTTTCAAGTGATAAGGAGAGTGCGCAGGAGTATGCTTCCACTGGACAAACTCTACAAAAGATCCTAGCTGAGGATGGAACTCCTAATGTAGCTGCCATAAATGGAAAGTACCTCCCTAAGGAATCTATGAACAAAATGTATCAGACTTTTATCAAGCCATGGATTGAACACGTGAGAAAAGAACGTGAACTGAAGGGACATCTTATCTCTGGAGTCTTAAGTCATGCTCAGAATGATATGGTTGGTAGGATGCTCAATGATGATGGTACACCTGATAAAGATGCTATCAAAAGGTTATTCGAGCAAGTTGATGGCGATGGCGATAACCATGTTTCAAGATCCGAGTTAGAGAAAGTAGTGAGGGAGACTCATTTTGGTAAGGCTGTAGATGCAGAGGAAGCAGTCTCAAACTCCTTCATGATCTGA
Protein sequence

>MsG0280010131.01.T01

MELMMFNQKKILIYFLTMIMTKGVIESSSNPEEYCKQMYGFLPCSNNILGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSSDKESAQEYASTGQTLQKILAEDGTPNVAAINGKYLPKESMNKMYQTFIKPWIEHVRKERELKGHLISGVLSHAQNDMVGRMLNDDGTPDKDAIKRLFEQVDGDGDNHVSRSELEKVVRETHFGKAVDAEEAVSNSFMI*