AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018631.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018631.01.T01 MTR_4g015630 71.429 371 37 6 15 316 70 440 1.63e-176 496
MsG0480018631.01.T01 MTR_7g068780 60.278 360 74 6 26 316 87 446 1.31e-144 415
MsG0480018631.01.T01 MTR_5g071170 52.033 369 90 6 19 309 26 385 2.05e-120 352
MsG0480018631.01.T01 MTR_3g464330 54.190 358 95 6 28 316 26 383 5.63e-116 340
MsG0480018631.01.T01 MTR_7g068780 57.965 226 54 4 26 210 87 312 9.44e-81 249
MsG0480018631.01.T01 MTR_1g054035 30.625 320 139 6 31 267 26 345 3.25e-38 139
MsG0480018631.01.T01 MTR_7g093200 29.814 322 142 7 31 268 75 396 5.59e-35 132
MsG0480018631.01.T01 MTR_1g111880 29.316 307 147 7 31 268 23 328 5.75e-35 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018631.01.T01 AT5G05580 60.383 366 54 6 29 314 81 435 2.84e-144 414
MsG0480018631.01.T01 AT3G11170 60.907 353 69 7 29 312 88 440 2.84e-139 401
MsG0480018631.01.T01 AT2G29980 50.802 374 101 6 19 316 16 382 2.11e-118 346
MsG0480018631.01.T01 AT5G05580 56.958 309 42 6 29 257 81 378 3.21e-108 320
MsG0480018631.01.T01 AT2G29980 46.032 252 81 4 19 222 16 260 1.78e-63 202
MsG0480018631.01.T01 AT3G12120 29.283 321 144 6 31 268 25 345 8.26e-37 135
MsG0480018631.01.T01 AT3G12120 29.283 321 144 6 31 268 25 345 8.26e-37 135

Find 93 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAATTACTCAAGCTTTA+TGG 0.136027 4:+7805657 MsG0480018631.01.T01:CDS
GGCACAAACAAGTCACTATT+TGG 0.140954 4:-7805546 None:intergenic
ATTTCACTCTTAATATTTAT+AGG 0.191977 4:-7807191 None:intergenic
GCTATGGCTGCTTTGCTTGT+AGG 0.251364 4:+7805612 MsG0480018631.01.T01:CDS
CTTATATCACCTAATGTAAA+AGG 0.263942 4:-7803833 None:intergenic
GGTGCACCAGGGTCAAAATT+TGG 0.265489 4:-7803806 None:intergenic
GCTGCTTTGCTTGTAGGTTT+AGG 0.278162 4:+7805618 MsG0480018631.01.T01:CDS
GGTAAAGGACTAGATTTCTT+TGG 0.287183 4:-7806925 None:intergenic
GGAAGAGGTGCTTTACAAAT+TGG 0.287961 4:+7807231 MsG0480018631.01.T01:three_prime_UTR
TCTTCCTCTGCAACCCTTGA+AGG 0.290001 4:-7803750 None:intergenic
AAAAGGTGGAGGGGTAGTTC+AGG 0.331464 4:+7803778 MsG0480018631.01.T01:CDS
CACCAGTGTCACTGACAAAA+TGG 0.361992 4:-7806990 None:intergenic
ACCTAAACATTGTTGGGTTA+AGG 0.363933 4:+7803865 MsG0480018631.01.T01:CDS
GAGGCAGCTAAACCAGTTCT+TGG 0.371883 4:+7806886 MsG0480018631.01.T01:CDS
TTGTAATATCTTCCAAGAAC+TGG 0.377558 4:-7806898 None:intergenic
TAAACATACCATCCATGATA+TGG 0.377797 4:-7804659 None:intergenic
ACAACTCTCGATCGTGACTA+TGG 0.378968 4:+7806147 MsG0480018631.01.T01:CDS
ATTGAGTGATTATTATTGAA+TGG 0.380102 4:+7807407 MsG0480018631.01.T01:three_prime_UTR
CCTAAGTTAAACAGTGTTGC+GGG 0.381423 4:+7804608 MsG0480018631.01.T01:CDS
CAGCTATACCTAAACATTGT+TGG 0.384073 4:+7803858 MsG0480018631.01.T01:CDS
TAAAGCTTGAGTAATTGAAT+TGG 0.388459 4:-7805654 None:intergenic
GTAGAAGAGCCACTAAGGTT+AGG 0.394730 4:-7807036 None:intergenic
AAATCTATGAGCTATGTGTT+AGG 0.396013 4:+7803896 MsG0480018631.01.T01:CDS
CAGGAATGGAGCTACCTTAG+AGG 0.397812 4:+7806117 MsG0480018631.01.T01:intron
GAGTTGTAAGTCCGCCTCTA+AGG 0.398628 4:-7806131 None:intergenic
ATTGTTGGGTTAAGGATCCT+TGG 0.399359 4:+7803873 MsG0480018631.01.T01:CDS
CCTTTACCATTTCACCTCCT+TGG 0.406643 4:+7806940 MsG0480018631.01.T01:CDS
TCCTTAACCCAACAATGTTT+AGG 0.408115 4:-7803866 None:intergenic
TGAAGGGAGTTATGTCTTCA+TGG 0.410198 4:+7807352 MsG0480018631.01.T01:three_prime_UTR
GTAGGTTTAGGATTTGTAAT+GGG 0.420064 4:+7805630 MsG0480018631.01.T01:CDS
AGCTATACCTAAACATTGTT+GGG 0.420218 4:+7803859 MsG0480018631.01.T01:CDS
GGAATGGAATTTACCACATA+AGG 0.420459 4:-7805684 None:intergenic
TGTAGGTTTAGGATTTGTAA+TGG 0.421486 4:+7805629 MsG0480018631.01.T01:CDS
TAAGAGTGAGTGCTCCTTCA+AGG 0.422040 4:+7803736 MsG0480018631.01.T01:CDS
ATTATGTAGTGTGGGATTTG+AGG 0.437432 4:-7806225 None:intergenic
AAATCTCCAAGGAGGTGAAA+TGG 0.440919 4:-7806946 None:intergenic
GCTTTATGGCATTCCTTATG+TGG 0.442119 4:+7805671 MsG0480018631.01.T01:CDS
GTAAAAGGTGGTGGTGCACC+AGG 0.442471 4:-7803818 None:intergenic
CAAACAGACCCTAACCTTAG+TGG 0.442623 4:+7807027 MsG0480018631.01.T01:CDS
TGCAGAGGAAGAAGAAGAAA+AGG 0.455123 4:+7803761 MsG0480018631.01.T01:CDS
GCACAAACAAGTCACTATTT+GGG 0.459556 4:-7805545 None:intergenic
GTGTTTGAATTCAGTGGAGC+AGG 0.468799 4:+7805493 MsG0480018631.01.T01:intron
AAATTGTTTATTCTTGATGA+AGG 0.474936 4:+7807335 MsG0480018631.01.T01:three_prime_UTR
CAAATTGGACTGTTGTAACT+TGG 0.483581 4:+7807246 MsG0480018631.01.T01:three_prime_UTR
CCCGCAACACTGTTTAACTT+AGG 0.489628 4:-7804608 None:intergenic
TAGAAGAGCCACTAAGGTTA+GGG 0.494714 4:-7807035 None:intergenic
TTCAGTGGAGCAGGAGTCCT+GGG 0.495423 4:+7805502 MsG0480018631.01.T01:intron
GGATAATGCATATTATATGC+AGG 0.498989 4:+7804468 MsG0480018631.01.T01:CDS
GGAAGAAGAAGAAAAGGTGG+AGG 0.502526 4:+7803767 MsG0480018631.01.T01:CDS
ATTCAGTGGAGCAGGAGTCC+TGG 0.502823 4:+7805501 MsG0480018631.01.T01:intron
CCCCATGAGCTTAACTCAGT+TGG 0.505918 4:+7804442 MsG0480018631.01.T01:CDS
TCCTCATAAGAAAAGGGAAG+AGG 0.511687 4:+7807216 MsG0480018631.01.T01:three_prime_UTR
TTGATGTAGAAGAGCCACTA+AGG 0.513464 4:-7807041 None:intergenic
AAGTGAGAACCACTCTTCCC+AGG 0.513601 4:-7805519 None:intergenic
TTATTACCTCAACAGTATGT+TGG 0.518216 4:+7805586 MsG0480018631.01.T01:CDS
ACCATCCATGATATGGTACT+AGG 0.523521 4:-7804652 None:intergenic
CAGCTTCAATTATGTAGTGT+GGG 0.527263 4:-7806233 None:intergenic
ATGTGTTAGGGATGTTGTTG+TGG 0.529534 4:+7803909 MsG0480018631.01.T01:CDS
TCAATCCTAGTACCATATCA+TGG 0.529822 4:+7804647 MsG0480018631.01.T01:CDS
AACAGTATGTTGGACAGCTA+TGG 0.530932 4:+7805596 MsG0480018631.01.T01:CDS
GATAATGCATATTATATGCA+GGG 0.533217 4:+7804469 MsG0480018631.01.T01:CDS
TACTCATTGATTGAAGCAAA+AGG 0.534663 4:+7807272 MsG0480018631.01.T01:three_prime_UTR
ATGAGCTTAACTCAGTTGGT+AGG 0.538067 4:+7804446 MsG0480018631.01.T01:CDS
AATTGTTTATTCTTGATGAA+GGG 0.541167 4:+7807336 MsG0480018631.01.T01:three_prime_UTR
AATAACATCCATCATGACAT+TGG 0.543696 4:+7806177 MsG0480018631.01.T01:CDS
TGCTCCTTCAAGGGTTGCAG+AGG 0.544094 4:+7803746 MsG0480018631.01.T01:CDS
CCAAGGAGGTGAAATGGTAA+AGG 0.549624 4:-7806940 None:intergenic
ATGTTGAAAATGATGAATCT+TGG 0.550797 4:+7804821 MsG0480018631.01.T01:CDS
AGAGGAAGAAGAAGAAAAGG+TGG 0.557395 4:+7803764 MsG0480018631.01.T01:CDS
AAGAGTGAGTGCTCCTTCAA+GGG 0.557691 4:+7803737 MsG0480018631.01.T01:CDS
TCACCTAATGTAAAAGGTGG+TGG 0.560118 4:-7803827 None:intergenic
ACCAACTGAGTTAAGCTCAT+GGG 0.562744 4:-7804443 None:intergenic
AATCTATGAGCTATGTGTTA+GGG 0.563868 4:+7803897 MsG0480018631.01.T01:CDS
ACAGCTTCAATTATGTAGTG+TGG 0.564947 4:-7806234 None:intergenic
GAAGAAGAAGAAAAGGTGGA+GGG 0.565751 4:+7803768 MsG0480018631.01.T01:CDS
TCCTAGTACCATATCATGGA+TGG 0.566773 4:+7804651 MsG0480018631.01.T01:CDS
TCCTAAGTTAAACAGTGTTG+CGG 0.570080 4:+7804607 MsG0480018631.01.T01:CDS
TGAGCTTAACTCAGTTGGTA+GGG 0.570465 4:+7804447 MsG0480018631.01.T01:CDS
CATGAGTTCCAATGTCATGA+TGG 0.588288 4:-7806185 None:intergenic
AGCAGGAGTCCTGGGAAGAG+TGG 0.590625 4:+7805510 MsG0480018631.01.T01:CDS
AAGAAGAAGAAAAGGTGGAG+GGG 0.597328 4:+7803769 MsG0480018631.01.T01:CDS
ATATCACCTAATGTAAAAGG+TGG 0.614456 4:-7803830 None:intergenic
TACCAACTGAGTTAAGCTCA+TGG 0.617411 4:-7804444 None:intergenic
CATATGACATATGAATTATG+TGG 0.619695 4:-7807112 None:intergenic
CCAACTGAGTTAAGCTCATG+GGG 0.624153 4:-7804442 None:intergenic
ACATAGCTCATAGATTTCCA+AGG 0.638388 4:-7803890 None:intergenic
AAATGATGAATCTTGGCACC+CGG 0.642419 4:+7804828 MsG0480018631.01.T01:CDS
AGCTGTCCAACATACTGTTG+AGG 0.647019 4:-7805592 None:intergenic
ATAATGCATATTATATGCAG+GGG 0.667160 4:+7804470 MsG0480018631.01.T01:CDS
GAATGGAGCTACCTTAGAGG+CGG 0.680144 4:+7806120 MsG0480018631.01.T01:CDS
AGAACACATCATCAAAACCA+TGG 0.681922 4:+7804796 MsG0480018631.01.T01:CDS
TAAAAGGTGGTGGTGCACCA+GGG 0.683201 4:-7803817 None:intergenic
CTAAGTTAAACAGTGTTGCG+GGG 0.690117 4:+7804609 MsG0480018631.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTAGTATAAATTAT+AGG - Chr4:7808062-7808081 None:intergenic 10.0%
!! ATTAATTATCATAATATAAC+TGG - Chr4:7804535-7804554 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - Chr4:7806345-7806364 None:intergenic 10.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - Chr4:7805735-7805754 None:intergenic 15.0%
!! AAAATTTATAAGGAAAAGAA+GGG - Chr4:7805889-7805908 None:intergenic 15.0%
!! ATAAATATGGTATTTATTCT+TGG + Chr4:7804236-7804255 MsG0480018631.01.T01:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - Chr4:7807194-7807213 None:intergenic 15.0%
!! ATTTGATGAGAAAATTTATA+AGG - Chr4:7805899-7805918 None:intergenic 15.0%
!! GGCTAAAAATATTAAAATAA+AGG - Chr4:7805934-7805953 None:intergenic 15.0%
!! TAATACTATTAATTTACCTT+GGG + Chr4:7806349-7806368 MsG0480018631.01.T01:intron 15.0%
!! TTAATACTATTAATTTACCT+TGG + Chr4:7806348-7806367 MsG0480018631.01.T01:intron 15.0%
!! TTGAACAAAATTAACATTAA+AGG - Chr4:7804318-7804337 None:intergenic 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + Chr4:7806500-7806519 MsG0480018631.01.T01:intron 15.0%
!! AAATTGTTTATTCTTGATGA+AGG + Chr4:7807335-7807354 MsG0480018631.01.T01:three_prime_UTR 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - Chr4:7804899-7804918 None:intergenic 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + Chr4:7807336-7807355 MsG0480018631.01.T01:three_prime_UTR 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + Chr4:7806491-7806510 MsG0480018631.01.T01:intron 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + Chr4:7807407-7807426 MsG0480018631.01.T01:three_prime_UTR 20.0%
!! ATTGGTTAACATTATAGTTT+AGG + Chr4:7808036-7808055 MsG0480018631.01.T01:intron 20.0%
!! GAAAATTTATAAGGAAAAGA+AGG - Chr4:7805890-7805909 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - Chr4:7804087-7804106 None:intergenic 20.0%
!! GCTATGATAATTGATAAATA+TGG + Chr4:7804223-7804242 MsG0480018631.01.T01:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + Chr4:7804265-7804284 MsG0480018631.01.T01:intron 20.0%
!! TCTAATTTATTCCAAATGAA+AGG - Chr4:7805977-7805996 None:intergenic 20.0%
!! TGATAATTAATAATCATGTC+TGG + Chr4:7804544-7804563 MsG0480018631.01.T01:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + Chr4:7806824-7806843 MsG0480018631.01.T01:intron 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + Chr4:7805471-7805490 MsG0480018631.01.T01:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + Chr4:7807210-7807229 MsG0480018631.01.T01:three_prime_UTR 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + Chr4:7806038-7806057 MsG0480018631.01.T01:intron 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - Chr4:7805126-7805145 None:intergenic 20.0%
!!! CAATTTGATGATATTTAAGA+TGG + Chr4:7806553-7806572 MsG0480018631.01.T01:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - Chr4:7804999-7805018 None:intergenic 20.0%
!!! TAATAATCACTCAATTTTTG+AGG - Chr4:7807402-7807421 None:intergenic 20.0%
!!! TCTTTTTTTTTTTTTTTGCG+AGG - Chr4:7808257-7808276 None:intergenic 20.0%
!!! TGATTTTGCTCAATTATTAT+TGG + Chr4:7804159-7804178 MsG0480018631.01.T01:intron 20.0%
!!! TTAAAACGATTTTTAAGTAC+TGG + Chr4:7807900-7807919 MsG0480018631.01.T01:intron 20.0%
!!! TTGTTGATTTTTTTTCTTAG+TGG + Chr4:7804345-7804364 MsG0480018631.01.T01:intron 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + Chr4:7804934-7804953 MsG0480018631.01.T01:intron 20.0%
! AATTGAATTCTCAATCACTA+TGG + Chr4:7807978-7807997 MsG0480018631.01.T01:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - Chr4:7804291-7804310 None:intergenic 25.0%
! ACTCTTGAAAAATACATAAG+TGG - Chr4:7807501-7807520 None:intergenic 25.0%
! ATAATGCATATTATATGCAG+GGG + Chr4:7804470-7804489 MsG0480018631.01.T01:CDS 25.0%
! ATGTTGAAAATGATGAATCT+TGG + Chr4:7804821-7804840 MsG0480018631.01.T01:CDS 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + Chr4:7805657-7805676 MsG0480018631.01.T01:CDS 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - Chr4:7806686-7806705 None:intergenic 25.0%
! CACGGTATATTTGAAAAAAT+AGG - Chr4:7806327-7806346 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - Chr4:7807115-7807134 None:intergenic 25.0%
! CTAAAGAAAAAACACCAAAT+TGG - Chr4:7804127-7804146 None:intergenic 25.0%
! CTTATATCACCTAATGTAAA+AGG - Chr4:7803836-7803855 None:intergenic 25.0%
! GAATGTAGAGTTACAAAAAT+TGG + Chr4:7808018-7808037 MsG0480018631.01.T01:intron 25.0%
! GATAATGCATATTATATGCA+GGG + Chr4:7804469-7804488 MsG0480018631.01.T01:CDS 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + Chr4:7806369-7806388 MsG0480018631.01.T01:intron 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - Chr4:7805657-7805676 None:intergenic 25.0%
! TAAGAAAAATGTGCTTTACT+GGG - Chr4:7807527-7807546 None:intergenic 25.0%
! TAATAATCATGTCTGGTATT+TGG + Chr4:7804551-7804570 MsG0480018631.01.T01:intron 25.0%
! TACTCAAAAGATCAAATTTC+AGG - Chr4:7808094-7808113 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - Chr4:7804410-7804429 None:intergenic 25.0%
! TATCAAATAGCAGAAAATAG+AGG - Chr4:7805066-7805085 None:intergenic 25.0%
! TATTTATTCTTGGTCATGAT+AGG + Chr4:7804246-7804265 MsG0480018631.01.T01:intron 25.0%
! TCAAACTATGGTAAATAGTT+AGG - Chr4:7805259-7805278 None:intergenic 25.0%
! TGGAATAAATTAGAAGCAAT+TGG + Chr4:7805983-7806002 MsG0480018631.01.T01:intron 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + Chr4:7806368-7806387 MsG0480018631.01.T01:intron 25.0%
! TTAAGAAAAATGTGCTTTAC+TGG - Chr4:7807528-7807547 None:intergenic 25.0%
!! AAGATTCATCATTTTCAACA+TGG - Chr4:7804822-7804841 None:intergenic 25.0%
!! ATAAACTTGCATTTTTCACA+TGG + Chr4:7807574-7807593 MsG0480018631.01.T01:intron 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - Chr4:7805570-7805589 None:intergenic 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + Chr4:7804096-7804115 MsG0480018631.01.T01:intron 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + Chr4:7807209-7807228 MsG0480018631.01.T01:three_prime_UTR 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + Chr4:7806093-7806112 MsG0480018631.01.T01:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - Chr4:7806427-7806446 None:intergenic 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - Chr4:7805346-7805365 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - Chr4:7806957-7806976 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + Chr4:7805279-7805298 MsG0480018631.01.T01:intron 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + Chr4:7807500-7807519 MsG0480018631.01.T01:intron 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - Chr4:7806368-7806387 None:intergenic 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + Chr4:7804858-7804877 MsG0480018631.01.T01:intron 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + Chr4:7803959-7803978 MsG0480018631.01.T01:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + Chr4:7806396-7806415 MsG0480018631.01.T01:intron 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - Chr4:7806960-7806979 None:intergenic 25.0%
!!! TTTTGATGATTTTTTTTCCC+CGG + Chr4:7804388-7804407 MsG0480018631.01.T01:intron 25.0%
AAAAAAAAGTGGCCAATTCA+TGG - Chr4:7805724-7805743 None:intergenic 30.0%
AAAAAACCAAGCCTTTCATT+TGG + Chr4:7805963-7805982 MsG0480018631.01.T01:intron 30.0%
AAATCTATGAGCTATGTGTT+AGG + Chr4:7803896-7803915 MsG0480018631.01.T01:CDS 30.0%
AACAGTGAATATAAGCTTAC+CGG - Chr4:7804850-7804869 None:intergenic 30.0%
AATAACATCCATCATGACAT+TGG + Chr4:7806177-7806196 MsG0480018631.01.T01:CDS 30.0%
AATCTATGAGCTATGTGTTA+GGG + Chr4:7803897-7803916 MsG0480018631.01.T01:CDS 30.0%
ACCACTAAATCAAGATTAGA+CGG + Chr4:7806659-7806678 MsG0480018631.01.T01:intron 30.0%
AGCAAAACATGTTCAAACTA+TGG - Chr4:7805271-7805290 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + Chr4:7803859-7803878 MsG0480018631.01.T01:CDS 30.0%
ATATCACCTAATGTAAAAGG+TGG - Chr4:7803833-7803852 None:intergenic 30.0%
ATATTAACATCTTCCTATCC+GGG - Chr4:7804409-7804428 None:intergenic 30.0%
CCAAAAACAGAGTTGAAATA+TGG - Chr4:7806687-7806706 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + Chr4:7804468-7804487 MsG0480018631.01.T01:CDS 30.0%
GTGAGAAGGAATAAGTTAAT+GGG + Chr4:7808190-7808209 MsG0480018631.01.T01:intron 30.0%
GTTAGGTATTACAACTTACA+AGG - Chr4:7805242-7805261 None:intergenic 30.0%
TAAACATACCATCCATGATA+TGG - Chr4:7804662-7804681 None:intergenic 30.0%
TAACTTATTCCTTCTCACAA+GGG - Chr4:7808188-7808207 None:intergenic 30.0%
TCATCAAGAATAGTGTAAAG+AGG - Chr4:7806811-7806830 None:intergenic 30.0%
TGAGAAGGAATAAGTTAATG+GGG + Chr4:7808191-7808210 MsG0480018631.01.T01:intron 30.0%
TGTGAGAAGGAATAAGTTAA+TGG + Chr4:7808189-7808208 MsG0480018631.01.T01:intron 30.0%
TTAACTTATTCCTTCTCACA+AGG - Chr4:7808189-7808208 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - Chr4:7805234-7805253 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + Chr4:7805386-7805405 MsG0480018631.01.T01:intron 30.0%
TTACTTATATTCAAGACCAG+AGG + Chr4:7806595-7806614 MsG0480018631.01.T01:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + Chr4:7805586-7805605 MsG0480018631.01.T01:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - Chr4:7805708-7805727 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - Chr4:7806901-7806920 None:intergenic 30.0%
TTTATTCCAAATGAAAGGCT+TGG - Chr4:7805972-7805991 None:intergenic 30.0%
TTTGCTCAATTATTATTGGC+TGG + Chr4:7804163-7804182 MsG0480018631.01.T01:intron 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + Chr4:7806098-7806117 MsG0480018631.01.T01:intron 30.0%
! CCATATTTCAACTCTGTTTT+TGG + Chr4:7806684-7806703 MsG0480018631.01.T01:intron 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + Chr4:7805630-7805649 MsG0480018631.01.T01:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - Chr4:7806291-7806310 None:intergenic 30.0%
! TAATTTTATCCCTTGTGAGA+AGG + Chr4:7808176-7808195 MsG0480018631.01.T01:intron 30.0%
! TACTCATTGATTGAAGCAAA+AGG + Chr4:7807272-7807291 MsG0480018631.01.T01:three_prime_UTR 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + Chr4:7805629-7805648 MsG0480018631.01.T01:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + Chr4:7803950-7803969 MsG0480018631.01.T01:intron 30.0%
!! CTGGTATTTGGATATTTTAG+TGG + Chr4:7804563-7804582 MsG0480018631.01.T01:intron 30.0%
!! TACTATTGGTTCAACCAATT+TGG + Chr4:7804110-7804129 MsG0480018631.01.T01:intron 30.0%
!!! AATGACAACTGGTTTTCTTT+TGG + Chr4:7807649-7807668 MsG0480018631.01.T01:intron 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + Chr4:7805709-7805728 MsG0480018631.01.T01:intron 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - Chr4:7805955-7805974 None:intergenic 30.0%
!!! TCACATGGTGTTTTTTAACA+TGG + Chr4:7807589-7807608 MsG0480018631.01.T01:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + Chr4:7804569-7804588 MsG0480018631.01.T01:intron 30.0%
AAGGAATAAGTTAATGGGGT+AGG + Chr4:7808195-7808214 MsG0480018631.01.T01:intron 35.0%
ACAGCTTCAATTATGTAGTG+TGG - Chr4:7806237-7806256 None:intergenic 35.0%
ACAGTGAATATAAGCTTACC+GGG - Chr4:7804849-7804868 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - Chr4:7803893-7803912 None:intergenic 35.0%
ACCTAAACATTGTTGGGTTA+AGG + Chr4:7803865-7803884 MsG0480018631.01.T01:CDS 35.0%
AGAACACATCATCAAAACCA+TGG + Chr4:7804796-7804815 MsG0480018631.01.T01:CDS 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + Chr4:7805156-7805175 MsG0480018631.01.T01:intron 35.0%
AGGAATAAGTTAATGGGGTA+GGG + Chr4:7808196-7808215 MsG0480018631.01.T01:intron 35.0%
ATTATGTAGTGTGGGATTTG+AGG - Chr4:7806228-7806247 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + Chr4:7807246-7807265 MsG0480018631.01.T01:three_prime_UTR 35.0%
CAGCTATACCTAAACATTGT+TGG + Chr4:7803858-7803877 MsG0480018631.01.T01:CDS 35.0%
CAGCTTCAATTATGTAGTGT+GGG - Chr4:7806236-7806255 None:intergenic 35.0%
CATGGATGGTATGTTTATGT+AGG + Chr4:7804665-7804684 MsG0480018631.01.T01:intron 35.0%
CCACTAAATCAAGATTAGAC+GGG + Chr4:7806660-7806679 MsG0480018631.01.T01:intron 35.0%
CTATAACGCTATAGTGTAGT+GGG + Chr4:7804959-7804978 MsG0480018631.01.T01:intron 35.0%
GACAATGCGTTATATATGCA+AGG + Chr4:7808218-7808237 MsG0480018631.01.T01:intron 35.0%
GAGAGTAACTTGACTATTGT+CGG - Chr4:7807812-7807831 None:intergenic 35.0%
GCACAAACAAGTCACTATTT+GGG - Chr4:7805548-7805567 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - Chr4:7805687-7805706 None:intergenic 35.0%
GGTAAAGGACTAGATTTCTT+TGG - Chr4:7806928-7806947 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + Chr4:7805300-7805319 MsG0480018631.01.T01:intron 35.0%
TAGAAAGGATATGCAAGCAT+TGG - Chr4:7805219-7805238 None:intergenic 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - Chr4:7805059-7805078 None:intergenic 35.0%
TATTAACATCTTCCTATCCG+GGG - Chr4:7804408-7804427 None:intergenic 35.0%
TCAATCCTAGTACCATATCA+TGG + Chr4:7804647-7804666 MsG0480018631.01.T01:CDS 35.0%
TCATCATCCTCTTTGTGTAA+AGG - Chr4:7807841-7807860 None:intergenic 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + Chr4:7804607-7804626 MsG0480018631.01.T01:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - Chr4:7803869-7803888 None:intergenic 35.0%
TCTGGTACTTAAATGACAAC+TGG + Chr4:7807638-7807657 MsG0480018631.01.T01:intron 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - Chr4:7805157-7805176 None:intergenic 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - Chr4:7805847-7805866 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + Chr4:7805789-7805808 MsG0480018631.01.T01:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + Chr4:7805487-7805506 MsG0480018631.01.T01:intron 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - Chr4:7805703-7805722 None:intergenic 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + Chr4:7803972-7803991 MsG0480018631.01.T01:intron 35.0%
! TCATTTTGTATGGACAGGAA+TGG + Chr4:7806103-7806122 MsG0480018631.01.T01:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + Chr4:7805799-7805818 MsG0480018631.01.T01:intron 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + Chr4:7803800-7803819 MsG0480018631.01.T01:CDS 35.0%
!!! ATGATTTTTTTTCCCCGGAT+AGG + Chr4:7804393-7804412 MsG0480018631.01.T01:intron 35.0%
!!! CATGGTGTTTTTTAACATGG+TGG + Chr4:7807592-7807611 MsG0480018631.01.T01:intron 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - Chr4:7807092-7807111 None:intergenic 35.0%
!!! GGTTTTGTTTGAAGAAGCAT+GGG + Chr4:7807670-7807689 MsG0480018631.01.T01:intron 35.0%
!!! GTTTTGTTTGAAGAAGCATG+GGG + Chr4:7807671-7807690 MsG0480018631.01.T01:intron 35.0%
!!! TATTGGCTGGTATTTTTTCC+TGG + Chr4:7804176-7804195 MsG0480018631.01.T01:intron 35.0%
!!! TGGTTTTGTTTGAAGAAGCA+TGG + Chr4:7807669-7807688 MsG0480018631.01.T01:intron 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + Chr4:7803921-7803940 MsG0480018631.01.T01:intron 35.0%
AAAAGTCAAACTTTGCCACC+AGG - Chr4:7804197-7804216 None:intergenic 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - Chr4:7806949-7806968 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + Chr4:7804828-7804847 MsG0480018631.01.T01:CDS 40.0%
AACAGTATGTTGGACAGCTA+TGG + Chr4:7805596-7805615 MsG0480018631.01.T01:CDS 40.0%
AAGAAGAAGAAAAGGTGGAG+GGG + Chr4:7803769-7803788 MsG0480018631.01.T01:CDS 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - Chr4:7804446-7804465 None:intergenic 40.0%
ACCATCCATGATATGGTACT+AGG - Chr4:7804655-7804674 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + Chr4:7806734-7806753 MsG0480018631.01.T01:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - Chr4:7806738-7806757 None:intergenic 40.0%
AGAGGAAGAAGAAGAAAAGG+TGG + Chr4:7803764-7803783 MsG0480018631.01.T01:CDS 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + Chr4:7804446-7804465 MsG0480018631.01.T01:CDS 40.0%
ATGTGTTAGGGATGTTGTTG+TGG + Chr4:7803909-7803928 MsG0480018631.01.T01:CDS 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + Chr4:7803873-7803892 MsG0480018631.01.T01:CDS 40.0%
ATTTAAGTACCAGACCACAG+TGG - Chr4:7807632-7807651 None:intergenic 40.0%
CATGAGTTCCAATGTCATGA+TGG - Chr4:7806188-7806207 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - Chr4:7806663-7806682 None:intergenic 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + Chr4:7804608-7804627 MsG0480018631.01.T01:CDS 40.0%
CCTCTTTGTGTAAAGGATCT+GGG - Chr4:7807834-7807853 None:intergenic 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + Chr4:7804609-7804628 MsG0480018631.01.T01:CDS 40.0%
CTCTTGTTCTTGGTCATGAT+TGG + Chr4:7804021-7804040 MsG0480018631.01.T01:intron 40.0%
CTTTGTCATGCACATTGTCA+AGG + Chr4:7807467-7807486 MsG0480018631.01.T01:intron 40.0%
GAAGAAGAAGAAAAGGTGGA+GGG + Chr4:7803768-7803787 MsG0480018631.01.T01:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + Chr4:7805851-7805870 MsG0480018631.01.T01:intron 40.0%
GCCATGAAGACAAATTACCA+TGG + Chr4:7805843-7805862 MsG0480018631.01.T01:intron 40.0%
GCTATAACGCTATAGTGTAG+TGG + Chr4:7804958-7804977 MsG0480018631.01.T01:intron 40.0%
GCTTTATGGCATTCCTTATG+TGG + Chr4:7805671-7805690 MsG0480018631.01.T01:CDS 40.0%
GGCACAAACAAGTCACTATT+TGG - Chr4:7805549-7805568 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - Chr4:7804447-7804466 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - Chr4:7807038-7807057 None:intergenic 40.0%
TCACCTAATGTAAAAGGTGG+TGG - Chr4:7803830-7803849 None:intergenic 40.0%
TCCTAGTACCATATCATGGA+TGG + Chr4:7804651-7804670 MsG0480018631.01.T01:CDS 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + Chr4:7807216-7807235 MsG0480018631.01.T01:three_prime_UTR 40.0%
TCCTCTTTGTGTAAAGGATC+TGG - Chr4:7807835-7807854 None:intergenic 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + Chr4:7807352-7807371 MsG0480018631.01.T01:three_prime_UTR 40.0%
TGCAGAGGAAGAAGAAGAAA+AGG + Chr4:7803761-7803780 MsG0480018631.01.T01:CDS 40.0%
TGCATATTATATGCAGGGGT+CGG + Chr4:7804474-7804493 MsG0480018631.01.T01:intron 40.0%
TGCTTATAATCAAGAGCGGA+CGG - Chr4:7806287-7806306 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + Chr4:7806867-7806886 MsG0480018631.01.T01:intron 40.0%
TTGATGTAGAAGAGCCACTA+AGG - Chr4:7807044-7807063 None:intergenic 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - Chr4:7807220-7807239 None:intergenic 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + Chr4:7803916-7803935 MsG0480018631.01.T01:CDS 40.0%
! CATCATTTTCAACATGGCCA+TGG - Chr4:7804816-7804835 None:intergenic 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + Chr4:7805793-7805812 MsG0480018631.01.T01:intron 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + Chr4:7803971-7803990 MsG0480018631.01.T01:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - Chr4:7805841-7805860 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + Chr4:7804761-7804780 MsG0480018631.01.T01:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + Chr4:7804447-7804466 MsG0480018631.01.T01:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + Chr4:7803996-7804015 MsG0480018631.01.T01:intron 40.0%
! TTTTTGCGAGGTTTGAACCT+CGG - Chr4:7808245-7808264 None:intergenic 40.0%
!! ACACTTTTTAACACCGATCC+GGG - Chr4:7807931-7807950 None:intergenic 40.0%
!! CACACTTTTTAACACCGATC+CGG - Chr4:7807932-7807951 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + Chr4:7807231-7807250 MsG0480018631.01.T01:three_prime_UTR 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - Chr4:7805213-7805232 None:intergenic 40.0%
!!! TTTTAAGTACTGGTCTACCC+CGG + Chr4:7807910-7807929 MsG0480018631.01.T01:intron 40.0%
AAGAGTGAGTGCTCCTTCAA+GGG + Chr4:7803737-7803756 MsG0480018631.01.T01:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + Chr4:7806147-7806166 MsG0480018631.01.T01:CDS 45.0%
AGCTGTCCAACATACTGTTG+AGG - Chr4:7805595-7805614 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + Chr4:7805856-7805875 MsG0480018631.01.T01:intron 45.0%
CAAACAGACCCTAACCTTAG+TGG + Chr4:7807027-7807046 MsG0480018631.01.T01:CDS 45.0%
CAGTTACGCACATTTGACAC+AGG - Chr4:7806773-7806792 None:intergenic 45.0%
CATATTATATGCAGGGGTCG+GGG + Chr4:7804476-7804495 MsG0480018631.01.T01:intron 45.0%
CATGCACATTGTCAAGGTTG+TGG + Chr4:7807473-7807492 MsG0480018631.01.T01:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - Chr4:7804445-7804464 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - Chr4:7806943-7806962 None:intergenic 45.0%
CCCAGATCCTTTACACAAAG+AGG + Chr4:7807831-7807850 MsG0480018631.01.T01:intron 45.0%
CCTTTACCATTTCACCTCCT+TGG + Chr4:7806940-7806959 MsG0480018631.01.T01:CDS 45.0%
CGTTATATATGCAAGGTCCG+AGG + Chr4:7808225-7808244 MsG0480018631.01.T01:intron 45.0%
GAACAAGAGAGCCCAAAACA+TGG - Chr4:7804010-7804029 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + Chr4:7804475-7804494 MsG0480018631.01.T01:intron 45.0%
GGAAGAAGAAGAAAAGGTGG+AGG + Chr4:7803767-7803786 MsG0480018631.01.T01:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - Chr4:7807039-7807058 None:intergenic 45.0%
GTGACCTATTTGCATCACCA+TGG + Chr4:7805821-7805840 MsG0480018631.01.T01:intron 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + Chr4:7805493-7805512 MsG0480018631.01.T01:intron 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + Chr4:7803736-7803755 MsG0480018631.01.T01:CDS 45.0%
TAATCAAGAGCGGACGGATA+CGG - Chr4:7806281-7806300 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - Chr4:7806614-7806633 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - Chr4:7805141-7805160 None:intergenic 45.0%
TGTAGCACAGACACTTCAGA+TGG - Chr4:7805435-7805454 None:intergenic 45.0%
! AACATGGTGGAGTGTGATAG+TGG + Chr4:7807605-7807624 MsG0480018631.01.T01:intron 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - Chr4:7805828-7805847 None:intergenic 45.0%
! CACCAGTGTCACTGACAAAA+TGG - Chr4:7806993-7807012 None:intergenic 45.0%
! CCCGCAACACTGTTTAACTT+AGG - Chr4:7804611-7804630 None:intergenic 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + Chr4:7803995-7804014 MsG0480018631.01.T01:intron 45.0%
! GACCATTTTGTCAGTGACAC+TGG + Chr4:7806988-7807007 MsG0480018631.01.T01:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + Chr4:7803824-7803843 MsG0480018631.01.T01:CDS 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + Chr4:7805618-7805637 MsG0480018631.01.T01:CDS 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + Chr4:7805400-7805419 MsG0480018631.01.T01:intron 45.0%
!! CACTTTTTAACACCGATCCG+GGG - Chr4:7807930-7807949 None:intergenic 45.0%
!! CGGATCGGTGTTAAAAAGTG+TGG + Chr4:7807930-7807949 MsG0480018631.01.T01:intron 45.0%
!! GTTTTGGGCTCTCTTGTTCT+TGG + Chr4:7804011-7804030 MsG0480018631.01.T01:intron 45.0%
!!! TGGCTGGTATTTTTTCCTGG+TGG + Chr4:7804179-7804198 MsG0480018631.01.T01:intron 45.0%
AAAAGGTGGAGGGGTAGTTC+AGG + Chr4:7803778-7803797 MsG0480018631.01.T01:CDS 50.0%
AAGCATGGGGTCCTCTTCAT+TGG + Chr4:7807684-7807703 MsG0480018631.01.T01:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - Chr4:7805522-7805541 None:intergenic 50.0%
ACTATAGCACTAGCGTGCAG+CGG + Chr4:7805021-7805040 MsG0480018631.01.T01:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - Chr4:7806753-7806772 None:intergenic 50.0%
ATGGGGTCCTCTTCATTGGA+CGG + Chr4:7807688-7807707 MsG0480018631.01.T01:intron 50.0%
CAGGAATGGAGCTACCTTAG+AGG + Chr4:7806117-7806136 MsG0480018631.01.T01:intron 50.0%
CCACTTTATTGGGCTGCTCA+AGG + Chr4:7803982-7804001 MsG0480018631.01.T01:intron 50.0%
CCCCATGAGCTTAACTCAGT+TGG + Chr4:7804442-7804461 MsG0480018631.01.T01:CDS 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - Chr4:7803985-7804004 None:intergenic 50.0%
GAATGGAGCTACCTTAGAGG+CGG + Chr4:7806120-7806139 MsG0480018631.01.T01:CDS 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + Chr4:7806886-7806905 MsG0480018631.01.T01:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - Chr4:7806134-7806153 None:intergenic 50.0%
GATACCTGTCCACGATACCA+TGG - Chr4:7805863-7805882 None:intergenic 50.0%
GGTGCACCAGGGTCAAAATT+TGG - Chr4:7803809-7803828 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - Chr4:7806876-7806895 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + Chr4:7806605-7806624 MsG0480018631.01.T01:intron 50.0%
TCACTCTCCGTCCAATGAAG+AGG - Chr4:7807698-7807717 None:intergenic 50.0%
TCTTCCTCTGCAACCCTTGA+AGG - Chr4:7803753-7803772 None:intergenic 50.0%
TGGACGGAGAGTGACTTGAT+TGG + Chr4:7807704-7807723 MsG0480018631.01.T01:intron 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + Chr4:7805612-7805631 MsG0480018631.01.T01:CDS 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - Chr4:7803820-7803839 None:intergenic 50.0%
!! AGTGTGATAGTGGTCCACTG+TGG + Chr4:7807615-7807634 MsG0480018631.01.T01:intron 50.0%
ATTCAGTGGAGCAGGAGTCC+TGG + Chr4:7805501-7805520 MsG0480018631.01.T01:intron 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + Chr4:7803746-7803765 MsG0480018631.01.T01:CDS 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + Chr4:7805502-7805521 MsG0480018631.01.T01:intron 55.0%
! GATAGTGGTCCACTGTGGTC+TGG + Chr4:7807620-7807639 MsG0480018631.01.T01:intron 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - Chr4:7803821-7803840 None:intergenic 55.0%
!! AGTACTGGTCTACCCCGGAT+CGG + Chr4:7807915-7807934 MsG0480018631.01.T01:intron 55.0%
AGCAGGAGTCCTGGGAAGAG+TGG + Chr4:7805510-7805529 MsG0480018631.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 7803728 7808276 7803728 ID=MsG0480018631.01;Name=MsG0480018631.01
Chr4 mRNA 7803728 7808276 7803728 ID=MsG0480018631.01.T01;Parent=MsG0480018631.01;Name=MsG0480018631.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0.42|0.75|1|0.85|0.75|8|418|316
Chr4 exon 7803728 7803937 7803728 ID=MsG0480018631.01.T01:exon:2479;Parent=MsG0480018631.01.T01
Chr4 exon 7804415 7804491 7804415 ID=MsG0480018631.01.T01:exon:2480;Parent=MsG0480018631.01.T01
Chr4 exon 7804583 7804672 7804583 ID=MsG0480018631.01.T01:exon:2481;Parent=MsG0480018631.01.T01
Chr4 exon 7804783 7804849 7804783 ID=MsG0480018631.01.T01:exon:2482;Parent=MsG0480018631.01.T01
Chr4 exon 7805507 7805692 7805507 ID=MsG0480018631.01.T01:exon:2483;Parent=MsG0480018631.01.T01
Chr4 exon 7806120 7806254 7806120 ID=MsG0480018631.01.T01:exon:2484;Parent=MsG0480018631.01.T01
Chr4 exon 7806883 7807456 7806883 ID=MsG0480018631.01.T01:exon:2485;Parent=MsG0480018631.01.T01
Chr4 exon 7808247 7808276 7808247 ID=MsG0480018631.01.T01:exon:2486;Parent=MsG0480018631.01.T01
Chr4 CDS 7803728 7803937 7803728 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 CDS 7804415 7804491 7804415 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 CDS 7804583 7804672 7804583 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 CDS 7804783 7804849 7804783 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 CDS 7805507 7805692 7805507 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 CDS 7806120 7806254 7806120 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 CDS 7806883 7807068 7806883 ID=MsG0480018631.01.T01:cds;Parent=MsG0480018631.01.T01
Chr4 three_prime_UTR 7807069 7807456 7807069 ID=MsG0480018631.01.T01:three_prime_utr;Parent=MsG0480018631.01.T01
Chr4 three_prime_UTR 7808247 7808276 7808247 ID=MsG0480018631.01.T01:three_prime_utr;Parent=MsG0480018631.01.T01
Gene Sequence

>MsG0480018631.01.T01

ATGGGAATTAAGAGTGAGTGCTCCTTCAAGGGTTGCAGAGGAAGAAGAAGAAAAGGTGGAGGGGTAGTTCAGGAATTTCCAAATTTTGACCCTGGTGCACCACCACCTTTTACATTAGGTGATATAAGAGCAGCTATACCTAAACATTGTTGGGTTAAGGATCCTTGGAAATCTATGAGCTATGTGTTAGGGATGTTGTTGTGGTTTTTGGAAGATGTTAATATATCAGTTATCTATCCCCATGAGCTTAACTCAGTTGGTAGGGATAATGCATATTATATGCAGGGTGGTCATGGAAGCTTTTCAAACAATCCTAAGTTAAACAGTGTTGCGGGGCATTTGCTGCATTCATCAATCCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACACATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGTGGAGCAGGAGTCCTGGGAAGAGTGGTTCTCACTTTGACCCAAATAGTGACTTGTTTGTGCCAAATGAGAGAAAAGATGTTATTACCTCAACAGTATGTTGGACAGCTATGGCTGCTTTGCTTGTAGGTTTAGGATTTGTAATGGGTCCAATTCAATTACTCAAGCTTTATGGCATTCCTTATGTGGAATGGAGCTACCTTAGAGGCGGACTTACAACTCTCGATCGTGACTATGGATTGATAAATAACATCCATCATGACATTGGAACTCATGTCATTCATCACTTATTTCCTCAAATCCCACACTACATAATTGAAGCTACTGAGGCAGCTAAACCAGTTCTTGGAAGATATTACAAAGAGCCAAAGAAATCTAGTCCTTTACCATTTCACCTCCTTGGAGATTTAATAAAAAGCATGAAAAAAGACCATTTTGTCAGTGACACTGGTGATATTGTTTACTATCAAACAGACCCTAACCTTAGTGGCTCTTCTACATCAAAATAA

Protein sequence

>MsG0480018631.01.T01

MGIKSECSFKGCRGRRRKGGGVVQEFPNFDPGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVLGMLLWFLEDVNISVIYPHELNSVGRDNAYYMQGGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPWSRSPGKSGSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMGPIQLLKLYGIPYVEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYIIEATEAAKPVLGRYYKEPKKSSPLPFHLLGDLIKSMKKDHFVSDTGDIVYYQTDPNLSGSSTSK*