AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018844.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018844.01.T01 MTR_4g019080 90.032 311 6 2 311 600 44 350 0.0 561
MsG0480018844.01.T01 MTR_4g019060 90.154 325 23 3 1 323 1 318 0.0 557
MsG0480018844.01.T01 MTR_7g066210 48.447 322 121 9 311 598 40 350 6.73e-88 277
MsG0480018844.01.T01 MTR_7g011345 85.000 80 12 0 502 581 1 80 1.24e-38 137
MsG0480018844.01.T01 MTR_3g069910 29.321 324 166 12 312 591 32 336 2.36e-24 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018844.01.T01 AT3G09210 52.632 323 119 7 14 322 18 320 1.75e-95 296
MsG0480018844.01.T01 AT5G01090 35.759 316 164 9 311 594 43 351 3.84e-51 180
MsG0480018844.01.T01 AT3G09190 34.202 307 168 6 312 587 41 344 9.50e-46 165
MsG0480018844.01.T01 AT3G09035 36.000 300 148 8 313 577 44 334 1.46e-36 140
MsG0480018844.01.T01 AT3G54080 29.352 293 184 11 312 587 48 334 3.51e-23 101
MsG0480018844.01.T01 AT5G03140 31.443 194 99 8 317 478 51 242 9.19e-13 71.6

Find 117 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTCCAATGTTGGAATTTA+TGG 0.057363 4:+10541176 MsG0480018844.01.T01:intron
ATCCAATTCTAACTCTTTAT+TGG 0.148841 4:-10536514 None:intergenic
GTTCTTGCTGCAATGATATT+TGG 0.190612 4:+10541919 MsG0480018844.01.T01:CDS
TGAAAGTTACTTTACCAATT+TGG 0.234551 4:+10541549 MsG0480018844.01.T01:CDS
AAGGAGGAAGCTCACCATTT+TGG 0.257911 4:-10536724 None:intergenic
TCCAATTCTAACTCTTTATT+GGG 0.258560 4:-10536513 None:intergenic
GCAGAACCTGTTACAAGTTT+AGG 0.266577 4:-10536636 None:intergenic
GAAGGTGTTGGTGGCTTTAT+TGG 0.271393 4:+10534876 MsG0480018844.01.T01:CDS
TGTGACTGTTAGTTGGTTAG+AGG 0.282285 4:-10536586 None:intergenic
TTGTCGAATCAAAGCCTAAA+AGG 0.289939 4:+10536550 MsG0480018844.01.T01:CDS
CTTTATTTGTGGACAATCTT+TGG 0.296212 4:+10541976 MsG0480018844.01.T01:CDS
AATGGTGTTAAAAGTGTTAA+AGG 0.299364 4:+10541395 MsG0480018844.01.T01:CDS
TGAAGCTCTTGCTCGTTCTT+TGG 0.300864 4:+10533472 MsG0480018844.01.T01:CDS
TGTTGAGTTTGGTGGTTATA+AGG 0.316166 4:+10541486 MsG0480018844.01.T01:CDS
TGTTCGTGTTTCTCGTGTTA+AGG 0.330776 4:+10533436 MsG0480018844.01.T01:CDS
GGTTCAGGTAGTGGTGAATC+TGG 0.341176 4:+10541242 MsG0480018844.01.T01:CDS
GGGGTTTGGTGGAGAGAGAG+GGG 0.345848 4:-10533190 None:intergenic
GTGGTGAAAAGTTGCATACT+TGG 0.363123 4:+10541581 MsG0480018844.01.T01:CDS
GCCAGTAGCTGAGGATGATA+TGG 0.369363 4:+10536392 MsG0480018844.01.T01:CDS
CATTCACTGTGCTTTATTTG+TGG 0.378610 4:+10541965 MsG0480018844.01.T01:CDS
TCATCCTCAGCTACTGGCCT+TGG 0.387686 4:-10536387 None:intergenic
GAAGGTATTAGTGTTGAGTT+TGG 0.387797 4:+10541475 MsG0480018844.01.T01:intron
GGTTGCATAGAACATCCTTC+TGG 0.388793 4:-10542021 None:intergenic
GCTGAACCGCAAAACCAAAA+TGG 0.394876 4:+10536710 MsG0480018844.01.T01:CDS
GAAAATGAAACTAATTGCTT+AGG 0.395154 4:-10541308 None:intergenic
CTTGATAATCTCATGAAGTT+AGG 0.396459 4:+10533398 MsG0480018844.01.T01:CDS
GATTGGTATGCTTGGAACTT+TGG 0.399952 4:+10533089 MsG0480018844.01.T01:five_prime_UTR
GTTCGTGTTTCTCGTGTTAA+GGG 0.401772 4:+10533437 MsG0480018844.01.T01:CDS
TCCCAATAAAGAGTTAGAAT+TGG 0.402290 4:+10536512 MsG0480018844.01.T01:CDS
GAGAGAGCAACGCAACAAAC+TGG 0.402702 4:+10533303 MsG0480018844.01.T01:CDS
GGAGGTGGAGGTGACGGAGG+TGG 0.403354 4:-10533228 None:intergenic
CAATTCTCTGGTTCAGGTAG+TGG 0.403902 4:+10541233 MsG0480018844.01.T01:CDS
AAAATCAAAACCTCTGTTCC+CGG 0.404481 4:+10534794 MsG0480018844.01.T01:CDS
TTCAATCTCAATGGAAAATG+AGG 0.414272 4:+10541346 MsG0480018844.01.T01:CDS
AAGATTCAATTCTCTGGTTC+AGG 0.423704 4:+10541227 MsG0480018844.01.T01:CDS
TTCCTATACTCAACATCTAA+AGG 0.425116 4:-10542042 None:intergenic
AAGGAGGAAGAAATGTTTGT+TGG 0.425503 4:+10541715 MsG0480018844.01.T01:CDS
GATAGAAGTAGAAGATGAAA+GGG 0.426555 4:+10533123 MsG0480018844.01.T01:exon
GGGTTTGGTGGAGAGAGAGG+GGG 0.431000 4:-10533189 None:intergenic
AGCCATTGGATCCATTGTTA+TGG 0.433636 4:+10541665 MsG0480018844.01.T01:CDS
TGCTTACGTATTTCCAACCT+TGG 0.434057 4:-10534901 None:intergenic
CTTCTTCTGTGACTGTTAGT+TGG 0.434285 4:-10536593 None:intergenic
TGACATATCTAATGTCTTGA+AGG 0.441160 4:+10541696 MsG0480018844.01.T01:CDS
TGTCGAATCAAAGCCTAAAA+GGG 0.441749 4:+10536551 MsG0480018844.01.T01:CDS
CTGAAATTTAAGTCCAATGT+TGG 0.442184 4:+10541167 MsG0480018844.01.T01:intron
AGACAATTAATAATAGAGAT+TGG 0.442473 4:+10533072 None:intergenic
GGGGTGTAGAAGCGTGGTGG+TGG 0.443964 4:-10533170 None:intergenic
CAAACCTTAAAATCGATATC+AGG 0.444501 4:-10533506 None:intergenic
GCTGCAATGATATTTGGTAC+TGG 0.447642 4:+10541925 MsG0480018844.01.T01:CDS
GAGGATTTCCGGGGAGGAGG+TGG 0.449141 4:-10533243 None:intergenic
GGTGGAGGTGACGGAGGTGG+CGG 0.456125 4:-10533225 None:intergenic
ATAATAGAGATTGGTATGCT+TGG 0.459071 4:+10533081 None:intergenic
TATGGAAGCAATCTTCAAAC+AGG 0.463026 4:+10536410 MsG0480018844.01.T01:CDS
ATGATATTTGGTACTGGTTG+TGG 0.463600 4:+10541931 MsG0480018844.01.T01:CDS
TCCATATCATCCTCAGCTAC+TGG 0.464176 4:-10536393 None:intergenic
AGATAGAAGTAGAAGATGAA+AGG 0.469203 4:+10533122 MsG0480018844.01.T01:exon
GGAGGAGGTGGAGGTGACGG+AGG 0.472236 4:-10533231 None:intergenic
GATTTCCGGGGAGGAGGTGG+AGG 0.474329 4:-10533240 None:intergenic
CGGGGAGGAGGTGGAGGTGA+CGG 0.476647 4:-10533234 None:intergenic
TCTGCTGTTCGAATTATATC+CGG 0.478763 4:+10536654 MsG0480018844.01.T01:CDS
TGAACCAGAGAATTGAATCT+TGG 0.478815 4:-10541225 None:intergenic
GGCTTTATTGGATCCAAGGT+TGG 0.482109 4:+10534888 MsG0480018844.01.T01:CDS
GAGTCCAAGATTCAATTCTC+TGG 0.483459 4:+10541221 MsG0480018844.01.T01:CDS
GTTGTAGATAATAAAACCAT+TGG 0.483802 4:+10542075 MsG0480018844.01.T01:CDS
ACATGGAAATTCAAAGCCAT+TGG 0.487541 4:+10541651 MsG0480018844.01.T01:CDS
TTGATTATGAAGCAAGTTCA+AGG 0.491101 4:+10541605 MsG0480018844.01.T01:CDS
AGTGAGGATTTCCGGGGAGG+AGG 0.491526 4:-10533246 None:intergenic
GGATGCTAACGCTTCACCTA+TGG 0.494851 4:+10533144 MsG0480018844.01.T01:CDS
AACCTTTAGATGTTGAGTAT+AGG 0.496316 4:+10542040 MsG0480018844.01.T01:CDS
GGTTGTTAAACCAAAGGAAA+AGG 0.497433 4:+10541870 MsG0480018844.01.T01:CDS
CTAACTTCATGAGATTATCA+AGG 0.505513 4:-10533397 None:intergenic
TGGTGGCTTTATTGGATCCA+AGG 0.512573 4:+10534884 MsG0480018844.01.T01:CDS
AAAGAGTATGAAGGTGTTGG+TGG 0.520308 4:+10534867 MsG0480018844.01.T01:CDS
TGCCATAACAATGGATCCAA+TGG 0.520573 4:-10541667 None:intergenic
GATAATAAAACCATTGGAGA+TGG 0.530127 4:+10542081 MsG0480018844.01.T01:CDS
TTCAATGGTTGTTAAACCAA+AGG 0.530255 4:+10541864 MsG0480018844.01.T01:CDS
AAAAGGCTGTCGCAAACTCT+GGG 0.533696 4:+10536487 MsG0480018844.01.T01:CDS
CTACTTATTACCATCTCCAA+TGG 0.535555 4:-10542091 None:intergenic
AAATCAAAACCTCTGTTCCC+GGG 0.538102 4:+10534795 MsG0480018844.01.T01:CDS
ATTACCATAAATTCCAACAT+TGG 0.542142 4:-10541180 None:intergenic
ATAAAAGAGTATGAAGGTGT+TGG 0.543081 4:+10534864 MsG0480018844.01.T01:CDS
GAGTTTGGTGGTTATAAGGA+TGG 0.543126 4:+10541490 MsG0480018844.01.T01:CDS
TGAAGTTAGGTCCTCAATGG+TGG 0.544907 4:+10533411 MsG0480018844.01.T01:CDS
AAAAGAGAATAAATCATGGA+TGG 0.549712 4:+10533364 MsG0480018844.01.T01:CDS
CGTCACCTCCACCTCCTCCC+CGG 0.550330 4:+10533235 MsG0480018844.01.T01:CDS
GTTCAGGTAGTGGTGAATCT+GGG 0.557504 4:+10541243 MsG0480018844.01.T01:CDS
TCATGAAGTTAGGTCCTCAA+TGG 0.559956 4:+10533408 MsG0480018844.01.T01:CDS
GGTATTAGTGTTGAGTTTGG+TGG 0.561452 4:+10541478 MsG0480018844.01.T01:intron
TGCAGTGAGGATTTCCGGGG+AGG 0.561800 4:-10533249 None:intergenic
GAAGTGAGATTGAGTAAACA+TGG 0.566356 4:+10541634 MsG0480018844.01.T01:CDS
GATTTACAAGAAACCCATCA+AGG 0.569535 4:+10541271 MsG0480018844.01.T01:CDS
GAGGTGGCGGAGATTGAGAG+AGG 0.572402 4:-10533212 None:intergenic
AGCAATCTTCAAACAGGCAA+AGG 0.575995 4:+10536416 MsG0480018844.01.T01:CDS
ACAGAAACATTAGGATCAAG+TGG 0.578057 4:-10541826 None:intergenic
TCAATCTCAATGGAAAATGA+GGG 0.579881 4:+10541347 MsG0480018844.01.T01:CDS
TGGCAATAAACGTGGTGCAG+TGG 0.597195 4:+10541996 MsG0480018844.01.T01:CDS
TAAACCAAGGCCAGTAGCTG+AGG 0.602508 4:+10536383 MsG0480018844.01.T01:CDS
AATCTTCAAACAGGCAAAGG+TGG 0.603658 4:+10536419 MsG0480018844.01.T01:CDS
CGTGGTGCAGTGGTTCCAGA+AGG 0.607471 4:+10542006 MsG0480018844.01.T01:CDS
AGGTGGCGGAGATTGAGAGA+GGG 0.608725 4:-10533211 None:intergenic
ATCTCAATGGAAAATGAGGG+TGG 0.611815 4:+10541350 MsG0480018844.01.T01:CDS
GAAGTTAGGTCCTCAATGGT+GGG 0.620845 4:+10533412 MsG0480018844.01.T01:CDS
GTGGCGGAGATTGAGAGAGG+GGG 0.622580 4:-10533209 None:intergenic
GACTACATAAAAGAGTATGA+AGG 0.622662 4:+10534858 MsG0480018844.01.T01:CDS
GAGCAACGCAACAAACTGGA+AGG 0.623859 4:+10533307 MsG0480018844.01.T01:CDS
CATATCTAATGTCTTGAAGG+AGG 0.626720 4:+10541699 MsG0480018844.01.T01:CDS
AAAATACAACCCGGGAACAG+AGG 0.632675 4:-10534804 None:intergenic
GGTGGCGGAGATTGAGAGAG+GGG 0.634140 4:-10533210 None:intergenic
AAAGGCAGATTAATAAACCA+AGG 0.636259 4:+10536370 MsG0480018844.01.T01:CDS
TCCTCACTGCAAAAGAACGC+AGG 0.637208 4:+10533261 MsG0480018844.01.T01:CDS
GTCGAATCAAAGCCTAAAAG+GGG 0.641344 4:+10536552 MsG0480018844.01.T01:CDS
AGCGTGGTGGTGGATTCCAT+AGG 0.665297 4:-10533160 None:intergenic
ACACGAACAACCCACCATTG+AGG 0.668787 4:-10533422 None:intergenic
ACAATCTTTGGCAATAAACG+TGG 0.699558 4:+10541988 MsG0480018844.01.T01:CDS
GGCTCTGAATGCATTGAACG+TGG 0.711138 4:-10541805 None:intergenic
ATTATGAAGCAAGTTCAAGG+AGG 0.716891 4:+10541608 MsG0480018844.01.T01:CDS
TCTGAATGCATTGAACGTGG+TGG 0.740071 4:-10541802 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTAATTATTTATCAATT+AGG + Chr4:10538909-10538928 MsG0480018844.01.T01:intron 10.0%
!! ATTATAAAATATTAGATTGA+GGG + Chr4:10538840-10538859 MsG0480018844.01.T01:intron 10.0%
!! TATTATAAAATATTAGATTG+AGG + Chr4:10538839-10538858 MsG0480018844.01.T01:intron 10.0%
!!! ATATAAAGTCTTATAAAATA+AGG - Chr4:10536210-10536229 None:intergenic 10.0%
!!! TAAAATAATGTTGATTTAAT+GGG + Chr4:10537020-10537039 MsG0480018844.01.T01:intron 10.0%
!!! TAATTTTGTTTAAATTAGTT+TGG + Chr4:10537931-10537950 MsG0480018844.01.T01:intron 10.0%
!!! TATTTTATAAGACTTTATAT+TGG + Chr4:10536210-10536229 MsG0480018844.01.T01:intron 10.0%
!!! TTAAAATAATGTTGATTTAA+TGG + Chr4:10537019-10537038 MsG0480018844.01.T01:intron 10.0%
!!! TTAAAATTTTGATGTTAATT+TGG - Chr4:10540705-10540724 None:intergenic 10.0%
!!! TTATTTAAAATTTTCTCTTT+TGG - Chr4:10540313-10540332 None:intergenic 10.0%
!!! TTCAAATTTTTTTTTTTTTG+AGG - Chr4:10539151-10539170 None:intergenic 10.0%
!! AAAAATGATTGGAAATAATA+AGG - Chr4:10539177-10539196 None:intergenic 15.0%
!! AAAATGATTGGAAATAATAA+GGG - Chr4:10539176-10539195 None:intergenic 15.0%
!! AAACAAGAAAAAAATGAATT+AGG + Chr4:10533879-10533898 MsG0480018844.01.T01:intron 15.0%
!! AAATTCTGATAAAAAATGAT+TGG - Chr4:10539188-10539207 None:intergenic 15.0%
!! AAGAAAATATTATATCTATC+TGG - Chr4:10537999-10538018 None:intergenic 15.0%
!! AAGAAAGTGAAAAAAATAAT+GGG - Chr4:10540931-10540950 None:intergenic 15.0%
!! AATTACACATGAATTAATTA+TGG - Chr4:10538412-10538431 None:intergenic 15.0%
!! ACGTAAAAATTACATTTAAA+TGG + Chr4:10540529-10540548 MsG0480018844.01.T01:intron 15.0%
!! ATGCTTGTAATTATTAATTT+CGG + Chr4:10536256-10536275 MsG0480018844.01.T01:intron 15.0%
!! ATTGGTTGTAATATTTATTA+TGG - Chr4:10538063-10538082 None:intergenic 15.0%
!! TCAAATATAAAATCTAATCT+AGG - Chr4:10538560-10538579 None:intergenic 15.0%
!!! AATTTTTTTTTTTTTGAGGA+AGG - Chr4:10539147-10539166 None:intergenic 15.0%
!!! ATTTTTACGTCTAAAAAAAA+AGG - Chr4:10540519-10540538 None:intergenic 15.0%
!!! ATTTTTTTTGAAGGAAATTT+TGG - Chr4:10537604-10537623 None:intergenic 15.0%
!!! ATTTTTTTTTTTTTGAGGAA+GGG - Chr4:10539146-10539165 None:intergenic 15.0%
!!! GGAATTTTTATTTTTTTTGA+AGG - Chr4:10537613-10537632 None:intergenic 15.0%
!!! TAAAAGTGACATATTTTTAT+TGG + Chr4:10535952-10535971 MsG0480018844.01.T01:intron 15.0%
!!! TAAGTTACATTTTTTTTTTG+TGG - Chr4:10539930-10539949 None:intergenic 15.0%
!!! TAATAGAGTTTTTAAGAATA+AGG - Chr4:10539984-10540003 None:intergenic 15.0%
!!! TATTTTGAGTTTAAATACTT+CGG - Chr4:10534068-10534087 None:intergenic 15.0%
!!! TGAGTTTTTGTATTTTAAAA+AGG + Chr4:10538972-10538991 MsG0480018844.01.T01:intron 15.0%
!!! TTGAAAAATAATGATTTTGA+AGG + Chr4:10541457-10541476 MsG0480018844.01.T01:intron 15.0%
!!! TTTAGCTTTTCATTAAAAAT+TGG - Chr4:10537513-10537532 None:intergenic 15.0%
!!! TTTATATCTCATTTGATTTA+AGG - Chr4:10540443-10540462 None:intergenic 15.0%
!!! TTTTAAACCAAAAAAAGATA+GGG - Chr4:10534575-10534594 None:intergenic 15.0%
!!! TTTTGTCAAAAAAATAGTTT+TGG - Chr4:10539016-10539035 None:intergenic 15.0%
!!! TTTTTTTTGAAGGAAATTTT+GGG - Chr4:10537603-10537622 None:intergenic 15.0%
!!! TTTTTTTTTTGACGTTTAAT+AGG - Chr4:10538102-10538121 None:intergenic 15.0%
!! AAAACATGTCATTAAATCAA+GGG + Chr4:10540248-10540267 MsG0480018844.01.T01:intron 20.0%
!! AAAAGATTTCAGAGAAAATA+GGG - Chr4:10535394-10535413 None:intergenic 20.0%
!! AAACATAAAGTGCAATAAAA+TGG - Chr4:10540189-10540208 None:intergenic 20.0%
!! AAAGTATACGTTATATTGAA+CGG + Chr4:10536095-10536114 MsG0480018844.01.T01:intron 20.0%
!! AACAATTAAGAAATGATGTT+TGG + Chr4:10534677-10534696 MsG0480018844.01.T01:intron 20.0%
!! AAGATAAATATTCAACTTCT+CGG - Chr4:10535455-10535474 None:intergenic 20.0%
!! AATATAATCGCTTGAATAAT+AGG + Chr4:10534084-10534103 MsG0480018844.01.T01:intron 20.0%
!! ACTTCTTATTATGAATGAAT+AGG - Chr4:10535288-10535307 None:intergenic 20.0%
!! ATATCAAATGACAAAAGAAA+AGG - Chr4:10535848-10535867 None:intergenic 20.0%
!! ATCACAATTGTATTCATAAA+AGG + Chr4:10537811-10537830 MsG0480018844.01.T01:intron 20.0%
!! ATCTAATGTGTATCTAAATT+GGG - Chr4:10537152-10537171 None:intergenic 20.0%
!! CATAGTGAAAATGAAAATTT+GGG - Chr4:10541033-10541052 None:intergenic 20.0%
!! GAACAAAATGATGAAAATTA+AGG - Chr4:10541087-10541106 None:intergenic 20.0%
!! GAAGAAAGTGAAAAAAATAA+TGG - Chr4:10540932-10540951 None:intergenic 20.0%
!! GTAATTATTGAAAATAATGC+TGG + Chr4:10538426-10538445 MsG0480018844.01.T01:intron 20.0%
!! GTTGAATATTTATCTTTGAT+TGG + Chr4:10535459-10535478 MsG0480018844.01.T01:intron 20.0%
!! TAAAAGATTTCAGAGAAAAT+AGG - Chr4:10535395-10535414 None:intergenic 20.0%
!! TATCAAATGACAAAAGAAAA+GGG - Chr4:10535847-10535866 None:intergenic 20.0%
!! TCACAATTGTATTCATAAAA+GGG + Chr4:10537812-10537831 MsG0480018844.01.T01:intron 20.0%
!! TGTACAAAGTTAATCATAAT+AGG - Chr4:10538135-10538154 None:intergenic 20.0%
!! TTATAAGACTTTATATTGGA+TGG + Chr4:10536214-10536233 MsG0480018844.01.T01:intron 20.0%
!!! AAAGTTTATGATGTCAATTT+TGG - Chr4:10539904-10539923 None:intergenic 20.0%
!!! AAATAAGATGTCATTTTAAG+GGG + Chr4:10538284-10538303 MsG0480018844.01.T01:intron 20.0%
!!! AAATTAAGGATTTGAAGTAA+AGG - Chr4:10541073-10541092 None:intergenic 20.0%
!!! AATGAGATTTTGATTAGAAA+TGG + Chr4:10541517-10541536 MsG0480018844.01.T01:CDS 20.0%
!!! AATTAAGGATTTGAAGTAAA+GGG - Chr4:10541072-10541091 None:intergenic 20.0%
!!! ATTTTCTCTGAAATCTTTTA+TGG + Chr4:10535395-10535414 MsG0480018844.01.T01:intron 20.0%
!!! CAAATAAGATGTCATTTTAA+GGG + Chr4:10538283-10538302 MsG0480018844.01.T01:intron 20.0%
!!! CACTGTTTTTTTTTTTTGAA+CGG + Chr4:10539371-10539390 MsG0480018844.01.T01:intron 20.0%
!!! CATTTTAAAGTTCAAATTGA+CGG - Chr4:10534227-10534246 None:intergenic 20.0%
!!! CGACTTATTGATTTTTTTAT+AGG + Chr4:10540464-10540483 MsG0480018844.01.T01:intron 20.0%
!!! CTATCTTAAACTTTTTTTAG+AGG + Chr4:10539038-10539057 MsG0480018844.01.T01:intron 20.0%
!!! GATTGAAAATTTTCAATTCT+AGG + Chr4:10534348-10534367 MsG0480018844.01.T01:intron 20.0%
!!! GTTTTAAACCAAAAAAAGAT+AGG - Chr4:10534576-10534595 None:intergenic 20.0%
!!! GTTTTAATAAAAGTTCATCT+GGG + Chr4:10541422-10541441 MsG0480018844.01.T01:intron 20.0%
!!! TAGATTGATTGTTTTTTTGA+AGG + Chr4:10538881-10538900 MsG0480018844.01.T01:intron 20.0%
!!! TATTTTACCCTATCTTTTTT+TGG + Chr4:10534565-10534584 MsG0480018844.01.T01:intron 20.0%
!!! TCAAAACTTTTAAGTATTAG+TGG + Chr4:10538655-10538674 MsG0480018844.01.T01:intron 20.0%
!!! TCAAATAAGATGTCATTTTA+AGG + Chr4:10538282-10538301 MsG0480018844.01.T01:intron 20.0%
!!! TGTTTTAATAAAAGTTCATC+TGG + Chr4:10541421-10541440 MsG0480018844.01.T01:intron 20.0%
!!! TTGAATCTTGAATTATTTTG+AGG + Chr4:10535873-10535892 MsG0480018844.01.T01:intron 20.0%
!!! TTGTGTTATTCATTTTGTTA+TGG + Chr4:10533584-10533603 MsG0480018844.01.T01:intron 20.0%
!!! TTGTGTTTTTGTGTTTTTTA+AGG + Chr4:10533526-10533545 MsG0480018844.01.T01:intron 20.0%
!!! TTTAATGCATTGCTAATTTT+TGG + Chr4:10534937-10534956 MsG0480018844.01.T01:intron 20.0%
!!! TTTGTTTAAATTAGTTTGGA+TGG + Chr4:10537935-10537954 MsG0480018844.01.T01:intron 20.0%
!!! TTTTACATTTTCAATCTCAA+TGG + Chr4:10541337-10541356 MsG0480018844.01.T01:CDS 20.0%
!!! TTTTTACGATATACTTCATA+TGG + Chr4:10535614-10535633 MsG0480018844.01.T01:intron 20.0%
! AAAAAACCTAAACTTGTAAC+AGG + Chr4:10536630-10536649 MsG0480018844.01.T01:CDS 25.0%
! AAAAGAGAATAAATCATGGA+TGG + Chr4:10533364-10533383 MsG0480018844.01.T01:CDS 25.0%
! AAGAAATCCTATATAACAAG+AGG + Chr4:10540100-10540119 MsG0480018844.01.T01:intron 25.0%
! ATAATATACAAGTATGCACT+AGG - Chr4:10537546-10537565 None:intergenic 25.0%
! ATACAAAGTTGACAAAATAG+TGG - Chr4:10535817-10535836 None:intergenic 25.0%
! ATATCATGATGAAATCTGAT+TGG - Chr4:10536819-10536838 None:intergenic 25.0%
! ATCAAATGACAAAAGAAAAG+GGG - Chr4:10535846-10535865 None:intergenic 25.0%
! ATCCAATTCTAACTCTTTAT+TGG - Chr4:10536517-10536536 None:intergenic 25.0%
! ATCCTCTATGATTAATTCTT+TGG + Chr4:10539620-10539639 MsG0480018844.01.T01:intron 25.0%
! ATCTCTTGTATGTATCTATT+TGG + Chr4:10535706-10535725 MsG0480018844.01.T01:intron 25.0%
! ATGAGTTCAATAAACGAATT+AGG + Chr4:10537860-10537879 MsG0480018844.01.T01:intron 25.0%
! ATTACCATAAATTCCAACAT+TGG - Chr4:10541183-10541202 None:intergenic 25.0%
! ATTCACGATTCAATCAAATT+TGG - Chr4:10538372-10538391 None:intergenic 25.0%
! ATTCCAATTAATTCTAGTGA+AGG - Chr4:10536746-10536765 None:intergenic 25.0%
! CAAAACATGTCATTAAATCA+AGG + Chr4:10540247-10540266 MsG0480018844.01.T01:intron 25.0%
! CAAATGATAAAACAATTGAG+AGG - Chr4:10536345-10536364 None:intergenic 25.0%
! CAAGTTCTCAAATCAAATAA+TGG - Chr4:10535320-10535339 None:intergenic 25.0%
! CCAAAAAAGAGAATAAATCA+TGG + Chr4:10533360-10533379 MsG0480018844.01.T01:CDS 25.0%
! CCATAGTGAAAATGAAAATT+TGG - Chr4:10541034-10541053 None:intergenic 25.0%
! CTTTATAGAAGTAGATCATT+CGG - Chr4:10536079-10536098 None:intergenic 25.0%
! CTTTCAATCTTGGATATATT+TGG - Chr4:10540751-10540770 None:intergenic 25.0%
! GAAAATGAAACTAATTGCTT+AGG - Chr4:10541311-10541330 None:intergenic 25.0%
! GATCTAATGTGTATCTAAAT+TGG - Chr4:10537153-10537172 None:intergenic 25.0%
! GGAAGTTCAAAAAATTATGT+GGG - Chr4:10539251-10539270 None:intergenic 25.0%
! GGTTTCTGATTATCATTTAA+GGG - Chr4:10539230-10539249 None:intergenic 25.0%
! GTTATGGATAAGAATAGAAT+TGG + Chr4:10533600-10533619 MsG0480018844.01.T01:intron 25.0%
! GTTGTAGATAATAAAACCAT+TGG + Chr4:10542075-10542094 MsG0480018844.01.T01:CDS 25.0%
! TAAAAAGAGTGAAACTTCAA+TGG + Chr4:10541849-10541868 MsG0480018844.01.T01:CDS 25.0%
! TAATCTATCAGATAAACCAA+GGG - Chr4:10535575-10535594 None:intergenic 25.0%
! TCAATCAAATTTGGTATGAT+TGG - Chr4:10538363-10538382 None:intergenic 25.0%
! TCCAATTCTAACTCTTTATT+GGG - Chr4:10536516-10536535 None:intergenic 25.0%
! TCGAAACAATTTGTCTTTAA+CGG + Chr4:10533744-10533763 MsG0480018844.01.T01:intron 25.0%
! TGGAAGTTCAAAAAATTATG+TGG - Chr4:10539252-10539271 None:intergenic 25.0%
! TTAATCTATCAGATAAACCA+AGG - Chr4:10535576-10535595 None:intergenic 25.0%
! TTGCTTGATCATTAATTTCA+TGG + Chr4:10534406-10534425 MsG0480018844.01.T01:intron 25.0%
! TTTCCATTATTATATTCCCT+TGG + Chr4:10540820-10540839 MsG0480018844.01.T01:intron 25.0%
!! ACATCTCAGATTTCAATTTT+GGG - Chr4:10537634-10537653 None:intergenic 25.0%
!! AGAATATTCCTTTATTTGAG+TGG + Chr4:10540075-10540094 MsG0480018844.01.T01:intron 25.0%
!! ATAATGCTTTTCTGTATTCA+TGG + Chr4:10541758-10541777 MsG0480018844.01.T01:CDS 25.0%
!! ATTTTTGTGATATTCCTTGT+GGG - Chr4:10540783-10540802 None:intergenic 25.0%
!! CCAAATTTTCATTTTCACTA+TGG + Chr4:10541031-10541050 MsG0480018844.01.T01:intron 25.0%
!! CGTCAATTTGAACTTTAAAA+TGG + Chr4:10534225-10534244 MsG0480018844.01.T01:intron 25.0%
!! CTCTTTTTAACAGAAACATT+AGG - Chr4:10541838-10541857 None:intergenic 25.0%
!! GAAAAAAATAATGGGAAAGT+TGG - Chr4:10540923-10540942 None:intergenic 25.0%
!! GATGTTTATGCAGATATTTT+AGG - Chr4:10536860-10536879 None:intergenic 25.0%
!! GTTTTATCATTTGCAGAAAA+AGG + Chr4:10536352-10536371 MsG0480018844.01.T01:intron 25.0%
!! TAGTATATGTCAATCAGTTT+TGG + Chr4:10537959-10537978 MsG0480018844.01.T01:intron 25.0%
!! TAGTCTTAAATTAGTTCAGA+TGG + Chr4:10534317-10534336 MsG0480018844.01.T01:intron 25.0%
!! TCTTTTATGTAGTCATGTAA+TGG - Chr4:10534852-10534871 None:intergenic 25.0%
!! TGAAAGTTACTTTACCAATT+TGG + Chr4:10541549-10541568 MsG0480018844.01.T01:CDS 25.0%
!! TTAACACTTTTAACACCATT+TGG - Chr4:10541395-10541414 None:intergenic 25.0%
!! TTCGATCATATTGATCATTT+TGG + Chr4:10534283-10534302 MsG0480018844.01.T01:intron 25.0%
!! TTTCTTTTCCACTCAAATAA+AGG - Chr4:10540086-10540105 None:intergenic 25.0%
!!! AATGGTGTTAAAAGTGTTAA+AGG + Chr4:10541395-10541414 MsG0480018844.01.T01:CDS 25.0%
!!! ACAATTCATTGTTTTGTTAG+AGG - Chr4:10535035-10535054 None:intergenic 25.0%
!!! AGGTTGTTGTTTTTGTTTTA+TGG + Chr4:10533546-10533565 MsG0480018844.01.T01:intron 25.0%
!!! ATATTGGATGGTGTTTTTTT+TGG + Chr4:10536226-10536245 MsG0480018844.01.T01:intron 25.0%
!!! ATCTTTTTCAAAATCAACGA+AGG - Chr4:10541147-10541166 None:intergenic 25.0%
!!! ATTATATCCGGATCATTTTT+AGG + Chr4:10536666-10536685 MsG0480018844.01.T01:CDS 25.0%
!!! CCATGATTTATTCTCTTTTT+TGG - Chr4:10533363-10533382 None:intergenic 25.0%
!!! TATTTTTGTGATATTCCTTG+TGG - Chr4:10540784-10540803 None:intergenic 25.0%
!!! TTATATCCGGATCATTTTTA+GGG + Chr4:10536667-10536686 MsG0480018844.01.T01:CDS 25.0%
!!! TTTTCCTGATATCGATTTTA+AGG + Chr4:10533502-10533521 MsG0480018844.01.T01:CDS 25.0%
!!! TTTTTTAATGTGTCATGTAG+TGG + Chr4:10539594-10539613 MsG0480018844.01.T01:intron 25.0%
AAAAACAGTGTAGAGATGAT+AGG - Chr4:10539361-10539380 None:intergenic 30.0%
AAAACAGTGTAGAGATGATA+GGG - Chr4:10539360-10539379 None:intergenic 30.0%
AAAGGCAGATTAATAAACCA+AGG + Chr4:10536370-10536389 MsG0480018844.01.T01:CDS 30.0%
AAATCAAACAAAGAATGCAC+AGG - Chr4:10534138-10534157 None:intergenic 30.0%
AAATCAACGAAGGAAAACAA+AGG - Chr4:10541137-10541156 None:intergenic 30.0%
AACCAAACAGTAGTAATCAA+AGG + Chr4:10539810-10539829 MsG0480018844.01.T01:intron 30.0%
AACCTTTAGATGTTGAGTAT+AGG + Chr4:10542040-10542059 MsG0480018844.01.T01:CDS 30.0%
AACGAAACAGTAGTAATCAA+AGG + Chr4:10539720-10539739 MsG0480018844.01.T01:intron 30.0%
AAGTCCAATGTTGGAATTTA+TGG + Chr4:10541176-10541195 MsG0480018844.01.T01:intron 30.0%
AATGACATGTTCACGATTAT+AGG + Chr4:10540038-10540057 MsG0480018844.01.T01:intron 30.0%
AATGAGACTTTGGATTTATG+TGG + Chr4:10533793-10533812 MsG0480018844.01.T01:intron 30.0%
ACACAACTTCAAATATGTTG+CGG - Chr4:10535074-10535093 None:intergenic 30.0%
ACATTGAGACATTAGACAAA+AGG - Chr4:10536293-10536312 None:intergenic 30.0%
AGAAGAAGAAGAAGAGAAAA+AGG + Chr4:10536470-10536489 MsG0480018844.01.T01:CDS 30.0%
AGATAGAAGTAGAAGATGAA+AGG + Chr4:10533122-10533141 MsG0480018844.01.T01:exon 30.0%
AGTGAAAATGAAAATTTGGG+TGG - Chr4:10541030-10541049 None:intergenic 30.0%
AGTTGAATGTGAATCATTGT+TGG + Chr4:10533936-10533955 MsG0480018844.01.T01:intron 30.0%
ATACAATTGCAGGAACATAT+AGG - Chr4:10537793-10537812 None:intergenic 30.0%
ATATCTCAACATCTTCTTTC+AGG - Chr4:10538813-10538832 None:intergenic 30.0%
ATTATTATCAGTGTTTGCGT+AGG - Chr4:10535134-10535153 None:intergenic 30.0%
CAAACCTTAAAATCGATATC+AGG - Chr4:10533509-10533528 None:intergenic 30.0%
CACTTTATGTTTGTTTATCG+CGG + Chr4:10540197-10540216 MsG0480018844.01.T01:intron 30.0%
CATAAAGTGCAATAAAATGG+TGG - Chr4:10540186-10540205 None:intergenic 30.0%
CCTATAATCTCTAATACTAG+AGG + Chr4:10538706-10538725 MsG0480018844.01.T01:intron 30.0%
CCTCTAGTATTAGAGATTAT+AGG - Chr4:10538709-10538728 None:intergenic 30.0%
CGATTCACGATTCAAAAAAT+AGG + Chr4:10536004-10536023 MsG0480018844.01.T01:intron 30.0%
CTAACTTCATGAGATTATCA+AGG - Chr4:10533400-10533419 None:intergenic 30.0%
CTGAAATTTAAGTCCAATGT+TGG + Chr4:10541167-10541186 MsG0480018844.01.T01:intron 30.0%
GAACAATTTCACTAACATCT+AGG - Chr4:10537365-10537384 None:intergenic 30.0%
GAGTTGAATGTGAATCATTT+AGG + Chr4:10533907-10533926 MsG0480018844.01.T01:intron 30.0%
GATAATAAAACCATTGGAGA+TGG + Chr4:10542081-10542100 MsG0480018844.01.T01:CDS 30.0%
GATAGAAGTAGAAGATGAAA+GGG + Chr4:10533123-10533142 MsG0480018844.01.T01:exon 30.0%
GATGTTTATTTATTGATCCG+TGG + Chr4:10534699-10534718 MsG0480018844.01.T01:intron 30.0%
GATTGGTGAATTGAATTGAA+TGG - Chr4:10538346-10538365 None:intergenic 30.0%
GCTGGAATAAACTAAATCAT+AGG + Chr4:10538444-10538463 MsG0480018844.01.T01:intron 30.0%
GCTTGAATAATAGGCATAAT+TGG + Chr4:10534093-10534112 MsG0480018844.01.T01:intron 30.0%
GGGTTTCTGATTATCATTTA+AGG - Chr4:10539231-10539250 None:intergenic 30.0%
GGTAATGCAAAAATTGTCAA+TGG + Chr4:10541197-10541216 MsG0480018844.01.T01:CDS 30.0%
GTATTCATAAAAGGGATAGA+GGG + Chr4:10537820-10537839 MsG0480018844.01.T01:intron 30.0%
GTTGAATGTGAATCATTGTT+GGG + Chr4:10533937-10533956 MsG0480018844.01.T01:intron 30.0%
TACAATTGTGATACAATTGC+AGG - Chr4:10537803-10537822 None:intergenic 30.0%
TACTGAGCCTAAAATTTGAA+GGG + Chr4:10537659-10537678 MsG0480018844.01.T01:intron 30.0%
TATTATTGTGAGATGTGTAC+TGG + Chr4:10537565-10537584 MsG0480018844.01.T01:intron 30.0%
TCAATCTCAATGGAAAATGA+GGG + Chr4:10541347-10541366 MsG0480018844.01.T01:CDS 30.0%
TCCCAATAAAGAGTTAGAAT+TGG + Chr4:10536512-10536531 MsG0480018844.01.T01:CDS 30.0%
TCTGTCTAGTTAGATTTGAT+CGG + Chr4:10536878-10536897 MsG0480018844.01.T01:intron 30.0%
TGACATATCTAATGTCTTGA+AGG + Chr4:10541696-10541715 MsG0480018844.01.T01:CDS 30.0%
TGACCAAGGGAATATAATAA+TGG - Chr4:10540826-10540845 None:intergenic 30.0%
TGATTATAGTTCATACTGAG+TGG + Chr4:10536129-10536148 MsG0480018844.01.T01:intron 30.0%
TGCCAAAGAATTAATCATAG+AGG - Chr4:10539625-10539644 None:intergenic 30.0%
TGTATTCATAAAAGGGATAG+AGG + Chr4:10537819-10537838 MsG0480018844.01.T01:intron 30.0%
TGTTTATGCGAAACTTAAAC+TGG + Chr4:10536986-10537005 MsG0480018844.01.T01:intron 30.0%
TTACCTTGAAAAACCTTGAT+GGG - Chr4:10541287-10541306 None:intergenic 30.0%
TTACTGAGCCTAAAATTTGA+AGG + Chr4:10537658-10537677 MsG0480018844.01.T01:intron 30.0%
TTCAACCTTTATGCTTCAAA+TGG + Chr4:10540969-10540988 MsG0480018844.01.T01:intron 30.0%
TTCAATCTCAATGGAAAATG+AGG + Chr4:10541346-10541365 MsG0480018844.01.T01:CDS 30.0%
TTCAATGGTTGTTAAACCAA+AGG + Chr4:10541864-10541883 MsG0480018844.01.T01:CDS 30.0%
TTCCTATACTCAACATCTAA+AGG - Chr4:10542045-10542064 None:intergenic 30.0%
TTCCTTTGATTACTACTGTT+TGG - Chr4:10539725-10539744 None:intergenic 30.0%
TTGAATGTGAATCATTTAGG+AGG + Chr4:10533910-10533929 MsG0480018844.01.T01:intron 30.0%
TTGATTATGAAGCAAGTTCA+AGG + Chr4:10541605-10541624 MsG0480018844.01.T01:CDS 30.0%
TTGGTTCAAACTTTCATATG+TGG - Chr4:10539885-10539904 None:intergenic 30.0%
TTTACCTTGAAAAACCTTGA+TGG - Chr4:10541288-10541307 None:intergenic 30.0%
! AAATAATGGGAAAGTTGGAT+TGG - Chr4:10540918-10540937 None:intergenic 30.0%
! AATAATGGGAAAGTTGGATT+GGG - Chr4:10540917-10540936 None:intergenic 30.0%
! ACATAGTCCTCTTGTTATAT+AGG - Chr4:10540110-10540129 None:intergenic 30.0%
! ACATATTTGAAGTTGTGTCT+AGG + Chr4:10535076-10535095 MsG0480018844.01.T01:intron 30.0%
! ATAAAAGAGTATGAAGGTGT+TGG + Chr4:10534864-10534883 MsG0480018844.01.T01:CDS 30.0%
! ATTCGTGTGATTGAACTTTT+TGG - Chr4:10540647-10540666 None:intergenic 30.0%
! CTTGATAATCTCATGAAGTT+AGG + Chr4:10533398-10533417 MsG0480018844.01.T01:CDS 30.0%
! CTTTATTTGTGGACAATCTT+TGG + Chr4:10541976-10541995 MsG0480018844.01.T01:CDS 30.0%
! GACATCTCAGATTTCAATTT+TGG - Chr4:10537635-10537654 None:intergenic 30.0%
! GACTACATAAAAGAGTATGA+AGG + Chr4:10534858-10534877 MsG0480018844.01.T01:CDS 30.0%
! GATGAGTGTAGAACTTTTTA+TGG + Chr4:10539435-10539454 MsG0480018844.01.T01:intron 30.0%
! TATCTGTTTTCTTTTGAACC+AGG + Chr4:10534163-10534182 MsG0480018844.01.T01:intron 30.0%
! TCAATTTTGTGCCATAACAA+TGG - Chr4:10541679-10541698 None:intergenic 30.0%
! TCATTAATTTCATGGACTGA+AGG + Chr4:10534414-10534433 MsG0480018844.01.T01:intron 30.0%
! TCTTCAATCTCTTTTTCTCA+TGG - Chr4:10534758-10534777 None:intergenic 30.0%
! TCTTTGTTTGAATGAGACTT+TGG + Chr4:10533783-10533802 MsG0480018844.01.T01:intron 30.0%
! TGATTCCATTTGAAGCATAA+AGG - Chr4:10540977-10540996 None:intergenic 30.0%
! TTTAGAGCTAGCATCTTATA+AGG + Chr4:10539542-10539561 MsG0480018844.01.T01:intron 30.0%
! TTTGTGAACCAGCTAATTTT+AGG - Chr4:10540670-10540689 None:intergenic 30.0%
!! GCTTTTGTTATGATTCCAAA+TGG + Chr4:10541377-10541396 MsG0480018844.01.T01:CDS 30.0%
!! TGATTCAAGTTTTGTCTTCT+AGG + Chr4:10535359-10535378 MsG0480018844.01.T01:intron 30.0%
!! TGTTGATTTAATGGGATGAT+AGG + Chr4:10537028-10537047 MsG0480018844.01.T01:intron 30.0%
!! TTAGAATCCAAGTTTTTCGA+TGG - Chr4:10539272-10539291 None:intergenic 30.0%
!! TTTTGTTGTGTTATGCAACA+TGG - Chr4:10540874-10540893 None:intergenic 30.0%
!!! AGGTTTTGATTTTACAGAGA+TGG - Chr4:10534787-10534806 None:intergenic 30.0%
!!! CTCTGAAATCTTTTATGGAT+TGG + Chr4:10535400-10535419 MsG0480018844.01.T01:intron 30.0%
!!! GAAATCTTTTATGGATTGGT+GGG + Chr4:10535404-10535423 MsG0480018844.01.T01:intron 30.0%
!!! GTAGTTTTTTCTTAACCATC+CGG + Chr4:10533638-10533657 MsG0480018844.01.T01:intron 30.0%
!!! GTTGGTTTTAATCATGTGAA+GGG + Chr4:10541733-10541752 MsG0480018844.01.T01:CDS 30.0%
!!! TGAAATCTTTTATGGATTGG+TGG + Chr4:10535403-10535422 MsG0480018844.01.T01:intron 30.0%
!!! TGTTGGTTTTAATCATGTGA+AGG + Chr4:10541732-10541751 MsG0480018844.01.T01:CDS 30.0%
!!! TTGGGTGGTTATTGATTTTA+GGG - Chr4:10541015-10541034 None:intergenic 30.0%
!!! TTGGTTTTAATCATGTGAAG+GGG + Chr4:10541734-10541753 MsG0480018844.01.T01:CDS 30.0%
!!! TTTGGGTGGTTATTGATTTT+AGG - Chr4:10541016-10541035 None:intergenic 30.0%
AAAATCAAAACCTCTGTTCC+CGG + Chr4:10534794-10534813 MsG0480018844.01.T01:CDS 35.0%
AAGGAGGAAGAAATGTTTGT+TGG + Chr4:10541715-10541734 MsG0480018844.01.T01:CDS 35.0%
AATGACAAAAGAAAAGGGGT+TGG - Chr4:10535842-10535861 None:intergenic 35.0%
AATGTGAATCATTGTTGGGT+TGG + Chr4:10533941-10533960 MsG0480018844.01.T01:intron 35.0%
AATGTTCTCTTTCCCGAATA+TGG - Chr4:10537337-10537356 None:intergenic 35.0%
ACAATCTTTGGCAATAAACG+TGG + Chr4:10541988-10542007 MsG0480018844.01.T01:CDS 35.0%
ACAATTGAGAGGATCAACTT+AGG - Chr4:10536334-10536353 None:intergenic 35.0%
ACACCTTTAATCGTAAGTGT+TGG + Chr4:10535227-10535246 MsG0480018844.01.T01:intron 35.0%
ACACGAATCCTAAAATTAGC+TGG + Chr4:10540659-10540678 MsG0480018844.01.T01:intron 35.0%
ACAGAAACATTAGGATCAAG+TGG - Chr4:10541829-10541848 None:intergenic 35.0%
ACATCAAATAGAGACACGAT+TGG - Chr4:10535663-10535682 None:intergenic 35.0%
ACATGGAAATTCAAAGCCAT+TGG + Chr4:10541651-10541670 MsG0480018844.01.T01:CDS 35.0%
ACATGTTCACGATTATAGGT+TGG + Chr4:10540042-10540061 MsG0480018844.01.T01:intron 35.0%
ACCAATTTGGCACTAAAAAG+TGG + Chr4:10541562-10541581 MsG0480018844.01.T01:CDS 35.0%
ACGAAGGAAAACAAAGGAAT+TGG - Chr4:10541131-10541150 None:intergenic 35.0%
ACTCATAGTTTACGGATAAG+TGG + Chr4:10533969-10533988 MsG0480018844.01.T01:intron 35.0%
ACTGAGCCTAAAATTTGAAG+GGG + Chr4:10537660-10537679 MsG0480018844.01.T01:intron 35.0%
AGACTTTGGATTTATGTGGA+TGG + Chr4:10533797-10533816 MsG0480018844.01.T01:intron 35.0%
AGAGACTAACTAATGCCTTT+AGG + Chr4:10537386-10537405 MsG0480018844.01.T01:intron 35.0%
AGAGTGAAACATACCATCAT+GGG - Chr4:10537423-10537442 None:intergenic 35.0%
AGGAATTGGGTCAAAAGATA+AGG - Chr4:10541117-10541136 None:intergenic 35.0%
AGGATTCATCATAGTGAATC+AGG - Chr4:10535752-10535771 None:intergenic 35.0%
ATAAACCAAGGGAAACAAGA+AGG - Chr4:10535564-10535583 None:intergenic 35.0%
ATCTCAGAAAAATACAACCC+GGG - Chr4:10534815-10534834 None:intergenic 35.0%
ATGTGAATCATTGTTGGGTT+GGG + Chr4:10533942-10533961 MsG0480018844.01.T01:intron 35.0%
ATTATGAAGCAAGTTCAAGG+AGG + Chr4:10541608-10541627 MsG0480018844.01.T01:CDS 35.0%
ATTGACGAGTTCACTCAAAT+CGG + Chr4:10537090-10537109 MsG0480018844.01.T01:intron 35.0%
CAAGCTCCAATCAATATGTT+TGG - Chr4:10534606-10534625 None:intergenic 35.0%
CAATTGTGACTGCAATGTTA+AGG + Chr4:10537765-10537784 MsG0480018844.01.T01:intron 35.0%
CACAAAGACGAAGATAATAG+AGG + Chr4:10538743-10538762 MsG0480018844.01.T01:intron 35.0%
CATATCTAATGTCTTGAAGG+AGG + Chr4:10541699-10541718 MsG0480018844.01.T01:CDS 35.0%
CATCGACAAGTGGAAAAATT+TGG - Chr4:10537486-10537505 None:intergenic 35.0%
CATCTCAGAAAAATACAACC+CGG - Chr4:10534816-10534835 None:intergenic 35.0%
CCAATGTCCATACAAACAAA+AGG + Chr4:10539850-10539869 MsG0480018844.01.T01:intron 35.0%
CCAATTAATTCTAGTGAAGG+AGG - Chr4:10536743-10536762 None:intergenic 35.0%
CCTCCTTCACTAGAATTAAT+TGG + Chr4:10536740-10536759 MsG0480018844.01.T01:intron 35.0%
CGAAGGAAAACAAAGGAATT+GGG - Chr4:10541130-10541149 None:intergenic 35.0%
CTACTTATTACCATCTCCAA+TGG - Chr4:10542094-10542113 None:intergenic 35.0%
CTCCAATCAATATGTTTGGA+TGG - Chr4:10534602-10534621 None:intergenic 35.0%
CTCCATCCAAACATATTGAT+TGG + Chr4:10534597-10534616 MsG0480018844.01.T01:intron 35.0%
CTGGTTCACAAATAATTGAG+TGG + Chr4:10540678-10540697 MsG0480018844.01.T01:intron 35.0%
GAAGTGAGATTGAGTAAACA+TGG + Chr4:10541634-10541653 MsG0480018844.01.T01:CDS 35.0%
GAATAATAGGCATAATTGGC+CGG + Chr4:10534097-10534116 MsG0480018844.01.T01:intron 35.0%
GAGAAAAAGAGATTGAAGAG+TGG + Chr4:10534759-10534778 MsG0480018844.01.T01:CDS 35.0%
GATTTACAAGAAACCCATCA+AGG + Chr4:10541271-10541290 MsG0480018844.01.T01:CDS 35.0%
GCGAGAAAATTGAGAAAACT+AGG + Chr4:10539660-10539679 MsG0480018844.01.T01:intron 35.0%
GGTTGTTAAACCAAAGGAAA+AGG + Chr4:10541870-10541889 MsG0480018844.01.T01:CDS 35.0%
GTGATTCGATTGAATGAATC+AGG - Chr4:10535772-10535791 None:intergenic 35.0%
GTTAAGTAAAGTCTGGCTAA+TGG + Chr4:10533691-10533710 MsG0480018844.01.T01:intron 35.0%
GTTCAAACTTTCATATGTGG+TGG - Chr4:10539882-10539901 None:intergenic 35.0%
GTTCTTGCTGCAATGATATT+TGG + Chr4:10541919-10541938 MsG0480018844.01.T01:CDS 35.0%
TAACATTGCAGTCACAATTG+TGG - Chr4:10537765-10537784 None:intergenic 35.0%
TACAAGAGATTCCTATCGAT+TGG - Chr4:10535696-10535715 None:intergenic 35.0%
TATGGAAGCAATCTTCAAAC+AGG + Chr4:10536410-10536429 MsG0480018844.01.T01:CDS 35.0%
TCTGCTGTTCGAATTATATC+CGG + Chr4:10536654-10536673 MsG0480018844.01.T01:CDS 35.0%
TGAACCAGAGAATTGAATCT+TGG - Chr4:10541228-10541247 None:intergenic 35.0%
TGAACTTCCATCGAAAAACT+TGG + Chr4:10539262-10539281 MsG0480018844.01.T01:intron 35.0%
TGCAAACCCTAAAAATGATC+CGG - Chr4:10536676-10536695 None:intergenic 35.0%
TGGCTAATGGTTATTCTAGT+CGG + Chr4:10533704-10533723 MsG0480018844.01.T01:intron 35.0%
TGGGTATGACTCATAGTTTA+CGG + Chr4:10533961-10533980 MsG0480018844.01.T01:intron 35.0%
TGTCGAATCAAAGCCTAAAA+GGG + Chr4:10536551-10536570 MsG0480018844.01.T01:CDS 35.0%
TTAAACTGAACCCAATCGAT+AGG + Chr4:10535682-10535701 MsG0480018844.01.T01:intron 35.0%
TTGTCGAATCAAAGCCTAAA+AGG + Chr4:10536550-10536569 MsG0480018844.01.T01:CDS 35.0%
TTTGGATTTATGTGGATGGA+GGG + Chr4:10533801-10533820 MsG0480018844.01.T01:intron 35.0%
! AAACCCATCAAGGTTTTTCA+AGG + Chr4:10541281-10541300 MsG0480018844.01.T01:CDS 35.0%
! AAGATTCAATTCTCTGGTTC+AGG + Chr4:10541227-10541246 MsG0480018844.01.T01:CDS 35.0%
! ACAAGAGATTCCTATCGATT+GGG - Chr4:10535695-10535714 None:intergenic 35.0%
! ACGGTGCATTTTACCATATT+CGG + Chr4:10537321-10537340 MsG0480018844.01.T01:intron 35.0%
! CAAATCCCCCTTCAAATTTT+AGG - Chr4:10537669-10537688 None:intergenic 35.0%
! CTCGGTTTATGTATTTTGCT+TGG - Chr4:10535437-10535456 None:intergenic 35.0%
! TATTTGAAGTTGTGTCTAGG+AGG + Chr4:10535079-10535098 MsG0480018844.01.T01:intron 35.0%
! TCATTCGGTACAAAGTATCA+TGG - Chr4:10536064-10536083 None:intergenic 35.0%
! TGTTGAGTTTGGTGGTTATA+AGG + Chr4:10541486-10541505 MsG0480018844.01.T01:CDS 35.0%
! TTCACGATTATAGGTTGGAA+AGG + Chr4:10540047-10540066 MsG0480018844.01.T01:intron 35.0%
! TTCTTCTTTGCCTTTTCCTT+TGG - Chr4:10541883-10541902 None:intergenic 35.0%
!! ATGATATTTGGTACTGGTTG+TGG + Chr4:10541931-10541950 MsG0480018844.01.T01:CDS 35.0%
!! ATGCTAGCTCTAAATCATAG+AGG - Chr4:10539536-10539555 None:intergenic 35.0%
!! CATTCACTGTGCTTTATTTG+TGG + Chr4:10541965-10541984 MsG0480018844.01.T01:CDS 35.0%
!! CCTTTTGTTTGTATGGACAT+TGG - Chr4:10539853-10539872 None:intergenic 35.0%
!! GAAGGTATTAGTGTTGAGTT+TGG + Chr4:10541475-10541494 MsG0480018844.01.T01:intron 35.0%
!! TAAAGGCATTAGTTAGTCTC+TGG - Chr4:10537387-10537406 None:intergenic 35.0%
!! TCTAAAAGTGCCTAATGGAA+TGG + Chr4:10539287-10539306 MsG0480018844.01.T01:intron 35.0%
!! TGGATTCTAAAAGTGCCTAA+TGG + Chr4:10539282-10539301 MsG0480018844.01.T01:intron 35.0%
!!! ACCACTTTTTAGTGCCAAAT+TGG - Chr4:10541566-10541585 None:intergenic 35.0%
AAAGTCTCAACCAAACAGGA+TGG - Chr4:10538535-10538554 None:intergenic 40.0%
AAATCAAAACCTCTGTTCCC+GGG + Chr4:10534795-10534814 MsG0480018844.01.T01:CDS 40.0%
AAGCAATGACCAACAACATG+TGG - Chr4:10538484-10538503 None:intergenic 40.0%
AATCTTCAAACAGGCAAAGG+TGG + Chr4:10536419-10536438 MsG0480018844.01.T01:CDS 40.0%
AATTGGACTTCATCGACAAG+TGG - Chr4:10537496-10537515 None:intergenic 40.0%
ACTGTTAGAAACATACAGCC+TGG - Chr4:10534184-10534203 None:intergenic 40.0%
AGCAATCTTCAAACAGGCAA+AGG + Chr4:10536416-10536435 MsG0480018844.01.T01:CDS 40.0%
AGCAATGACCAACAACATGT+GGG - Chr4:10538483-10538502 None:intergenic 40.0%
AGCCATTGGATCCATTGTTA+TGG + Chr4:10541665-10541684 MsG0480018844.01.T01:CDS 40.0%
AGGATCAACTTAGGCTTAAC+AGG - Chr4:10536325-10536344 None:intergenic 40.0%
AGTGAATCAGGATTCGAGAT+GGG - Chr4:10535740-10535759 None:intergenic 40.0%
ATCTCAATGGAAAATGAGGG+TGG + Chr4:10541350-10541369 MsG0480018844.01.T01:CDS 40.0%
ATTCAAACCCCACATGTTGT+TGG + Chr4:10538472-10538491 MsG0480018844.01.T01:intron 40.0%
CAGAGTGAAACATACCATCA+TGG - Chr4:10537424-10537443 None:intergenic 40.0%
CAGGATTTCATCACAGAATC+CGG - Chr4:10534119-10534138 None:intergenic 40.0%
CAGTGTGATTAGACTTGGAA+AGG - Chr4:10537229-10537248 None:intergenic 40.0%
CCTAAAACCAAACACTACCA+CGG - Chr4:10534719-10534738 None:intergenic 40.0%
CTATAACCCTGCAACATCTA+GGG - Chr4:10534510-10534529 None:intergenic 40.0%
CTGAGCCTAAAATTTGAAGG+GGG + Chr4:10537661-10537680 MsG0480018844.01.T01:intron 40.0%
CTTCTTCTGTGACTGTTAGT+TGG - Chr4:10536596-10536615 None:intergenic 40.0%
CTTTGGATTTATGTGGATGG+AGG + Chr4:10533800-10533819 MsG0480018844.01.T01:intron 40.0%
GAAAATGAACCGTCACAGTT+TGG - Chr4:10534488-10534507 None:intergenic 40.0%
GAAACATACCATCATGGGAA+GGG - Chr4:10537418-10537437 None:intergenic 40.0%
GAAGTGGGAACTTTCAATCT+TGG - Chr4:10540761-10540780 None:intergenic 40.0%
GAATATGGTAAAATGCACCG+TGG - Chr4:10537322-10537341 None:intergenic 40.0%
GAGTCCAAGATTCAATTCTC+TGG + Chr4:10541221-10541240 MsG0480018844.01.T01:CDS 40.0%
GATTGGTATGCTTGGAACTT+TGG + Chr4:10533089-10533108 MsG0480018844.01.T01:five_prime_UTR 40.0%
GCACCAACACTTACGATTAA+AGG - Chr4:10535233-10535252 None:intergenic 40.0%
GCAGAACCTGTTACAAGTTT+AGG - Chr4:10536639-10536658 None:intergenic 40.0%
GCTGCAATGATATTTGGTAC+TGG + Chr4:10541925-10541944 MsG0480018844.01.T01:CDS 40.0%
GGATAAAGTCTCAACCAAAC+AGG - Chr4:10538539-10538558 None:intergenic 40.0%
GGCTAATGGTTATTCTAGTC+GGG + Chr4:10533705-10533724 MsG0480018844.01.T01:intron 40.0%
GTCGAATCAAAGCCTAAAAG+GGG + Chr4:10536552-10536571 MsG0480018844.01.T01:CDS 40.0%
GTCGGAAGTTAAGTAAAGTC+TGG + Chr4:10533684-10533703 MsG0480018844.01.T01:intron 40.0%
GTGGTGAAAAGTTGCATACT+TGG + Chr4:10541581-10541600 MsG0480018844.01.T01:CDS 40.0%
GTTAGAGGACTTGATGAACA+TGG - Chr4:10535020-10535039 None:intergenic 40.0%
GTTCGTGTTTCTCGTGTTAA+GGG + Chr4:10533437-10533456 MsG0480018844.01.T01:CDS 40.0%
TAGTGAATCAGGATTCGAGA+TGG - Chr4:10535741-10535760 None:intergenic 40.0%
TCATGAAGTTAGGTCCTCAA+TGG + Chr4:10533408-10533427 MsG0480018844.01.T01:CDS 40.0%
TCATTCACTCATGTGCAAAC+CGG - Chr4:10537122-10537141 None:intergenic 40.0%
TCATTTAACCGTCTTCATGC+AGG + Chr4:10537296-10537315 MsG0480018844.01.T01:intron 40.0%
TCTATAACCCTGCAACATCT+AGG - Chr4:10534511-10534530 None:intergenic 40.0%
TGAAACATACCATCATGGGA+AGG - Chr4:10537419-10537438 None:intergenic 40.0%
TGATATTCCTTGTGGGAAGT+GGG - Chr4:10540776-10540795 None:intergenic 40.0%
TGCCATAACAATGGATCCAA+TGG - Chr4:10541670-10541689 None:intergenic 40.0%
TGCTTACGTATTTCCAACCT+TGG - Chr4:10534904-10534923 None:intergenic 40.0%
TGGCTGACTACACTAAGTTT+AGG - Chr4:10535797-10535816 None:intergenic 40.0%
TGTGACTGTTAGTTGGTTAG+AGG - Chr4:10536589-10536608 None:intergenic 40.0%
TGTTCGTGTTTCTCGTGTTA+AGG + Chr4:10533436-10533455 MsG0480018844.01.T01:CDS 40.0%
TGTTGTGTTATGCAACATGG+TGG - Chr4:10540871-10540890 None:intergenic 40.0%
TTCTAGTCGGGAATGAAACT+CGG + Chr4:10533717-10533736 MsG0480018844.01.T01:intron 40.0%
TTGTGCAGTGTGATTAGACT+TGG - Chr4:10537234-10537253 None:intergenic 40.0%
TTTCTCGCTTAGTACAGTCA+AGG - Chr4:10539648-10539667 None:intergenic 40.0%
! ACTAAGTCACTAGCTTAGGT+CGG + Chr4:10538037-10538056 MsG0480018844.01.T01:intron 40.0%
! AGTTCATCTGGGTTTTCTCT+TGG + Chr4:10541433-10541452 MsG0480018844.01.T01:intron 40.0%
! CATTTTCCCTAGATGTTGCA+GGG + Chr4:10534501-10534520 MsG0480018844.01.T01:intron 40.0%
! CGGTGCATTTTACCATATTC+GGG + Chr4:10537322-10537341 MsG0480018844.01.T01:intron 40.0%
! CTCTTTTTCTCATGGATAGC+TGG - Chr4:10534750-10534769 None:intergenic 40.0%
! GAGTTTGGTGGTTATAAGGA+TGG + Chr4:10541490-10541509 MsG0480018844.01.T01:CDS 40.0%
! GGTATTAGTGTTGAGTTTGG+TGG + Chr4:10541478-10541497 MsG0480018844.01.T01:intron 40.0%
! TATTGATCCGTGGTAGTGTT+TGG + Chr4:10534709-10534728 MsG0480018844.01.T01:intron 40.0%
! TCAAATTGACGGATGCGTAA+AGG - Chr4:10534216-10534235 None:intergenic 40.0%
! TCATTTTCCCTAGATGTTGC+AGG + Chr4:10534500-10534519 MsG0480018844.01.T01:intron 40.0%
! TCTTTTGCAGTGAGGATTTC+CGG - Chr4:10533257-10533276 None:intergenic 40.0%
!! AAAGAGTATGAAGGTGTTGG+TGG + Chr4:10534867-10534886 MsG0480018844.01.T01:CDS 40.0%
!! AAGTGTTGGTGCTATATAGC+TGG + Chr4:10535241-10535260 MsG0480018844.01.T01:intron 40.0%
!! CATTTTAAGGGGATCTTGAG+TGG + Chr4:10538295-10538314 MsG0480018844.01.T01:intron 40.0%
!! GTCGAGACCTTTTGTTTGTA+TGG - Chr4:10539860-10539879 None:intergenic 40.0%
!! GTTTTCCTTCTTGTTTCCCT+TGG + Chr4:10535556-10535575 MsG0480018844.01.T01:intron 40.0%
!!! AGCTCACCATTTTGGTTTTG+CGG - Chr4:10536719-10536738 None:intergenic 40.0%
!!! GGATCATTTTTAGGGTTTGC+AGG + Chr4:10536675-10536694 MsG0480018844.01.T01:CDS 40.0%
!!! GTTTTTCTAGAGCCCCTTTT+AGG - Chr4:10536567-10536586 None:intergenic 40.0%
AAAAAGGCTGTCGCAAACTC+TGG + Chr4:10536486-10536505 MsG0480018844.01.T01:CDS 45.0%
AAAAGGCTGTCGCAAACTCT+GGG + Chr4:10536487-10536506 MsG0480018844.01.T01:CDS 45.0%
AAAATACAACCCGGGAACAG+AGG - Chr4:10534807-10534826 None:intergenic 45.0%
AAAATGTTAACCAGTGCCCC+CGG - Chr4:10540420-10540439 None:intergenic 45.0%
AACTCCAGACCAAACTGTGA+CGG + Chr4:10534476-10534495 MsG0480018844.01.T01:intron 45.0%
AAGTGGCCATGTCGCTAATT+GGG + Chr4:10533986-10534005 MsG0480018844.01.T01:intron 45.0%
ATACATGTCAGAGTCGACAC+CGG - Chr4:10535195-10535214 None:intergenic 45.0%
ATCAAATAGACTGCTCCGAC+CGG + Chr4:10537170-10537189 MsG0480018844.01.T01:intron 45.0%
ATTACCCTTGAGCCATACTG+CGG - Chr4:10534032-10534051 None:intergenic 45.0%
CTGATCGAGAACCGAACTTA+TGG - Chr4:10537196-10537215 None:intergenic 45.0%
GAAGTTAGGTCCTCAATGGT+GGG + Chr4:10533412-10533431 MsG0480018844.01.T01:CDS 45.0%
GCAATGACCAACAACATGTG+GGG - Chr4:10538482-10538501 None:intergenic 45.0%
GCTGAACCGCAAAACCAAAA+TGG + Chr4:10536710-10536729 MsG0480018844.01.T01:CDS 45.0%
GGTTGCATAGAACATCCTTC+TGG - Chr4:10542024-10542043 None:intergenic 45.0%
GTGATACTCAGAGTCAGAAG+TGG + Chr4:10539330-10539349 MsG0480018844.01.T01:intron 45.0%
GTGATATTCCTTGTGGGAAG+TGG - Chr4:10540777-10540796 None:intergenic 45.0%
TAAGTGGCCATGTCGCTAAT+TGG + Chr4:10533985-10534004 MsG0480018844.01.T01:intron 45.0%
TAATGGAATGGTGTGTGGTG+AGG + Chr4:10539299-10539318 MsG0480018844.01.T01:intron 45.0%
TCACCACACACCATTCCATT+AGG - Chr4:10539300-10539319 None:intergenic 45.0%
TCCATATCATCCTCAGCTAC+TGG - Chr4:10536396-10536415 None:intergenic 45.0%
TCTGAATGCATTGAACGTGG+TGG - Chr4:10541805-10541824 None:intergenic 45.0%
TCTTATCTCCTCAGCTGGTA+GGG - Chr4:10534639-10534658 None:intergenic 45.0%
TGAAGCTCTTGCTCGTTCTT+TGG + Chr4:10533472-10533491 MsG0480018844.01.T01:CDS 45.0%
TGAAGTTAGGTCCTCAATGG+TGG + Chr4:10533411-10533430 MsG0480018844.01.T01:CDS 45.0%
TTCTTAACCATCCGGTTCTG+AGG + Chr4:10533646-10533665 MsG0480018844.01.T01:intron 45.0%
TTCTTATCTCCTCAGCTGGT+AGG - Chr4:10534640-10534659 None:intergenic 45.0%
TTTATGTGGATGGAGGGCTT+TGG + Chr4:10533807-10533826 MsG0480018844.01.T01:intron 45.0%
! AAGGAGGAAGCTCACCATTT+TGG - Chr4:10536727-10536746 None:intergenic 45.0%
! CAATTCTCTGGTTCAGGTAG+TGG + Chr4:10541233-10541252 MsG0480018844.01.T01:CDS 45.0%
! CTTTTGCAGTGAGGATTTCC+GGG - Chr4:10533256-10533275 None:intergenic 45.0%
! GCACACTAAGTCACTAGCTT+AGG + Chr4:10538033-10538052 MsG0480018844.01.T01:intron 45.0%
! GTTCAGGTAGTGGTGAATCT+GGG + Chr4:10541243-10541262 MsG0480018844.01.T01:CDS 45.0%
! TACATGTGTAAGTGTCGTGC+CGG + Chr4:10535173-10535192 MsG0480018844.01.T01:intron 45.0%
! TCTTAACCATCCGGTTCTGA+GGG + Chr4:10533647-10533666 MsG0480018844.01.T01:intron 45.0%
! TTTTGCAGTGAGGATTTCCG+GGG - Chr4:10533255-10533274 None:intergenic 45.0%
!! GAAGGTGTTGGTGGCTTTAT+TGG + Chr4:10534876-10534895 MsG0480018844.01.T01:CDS 45.0%
!! GGCTTTATTGGATCCAAGGT+TGG + Chr4:10534888-10534907 MsG0480018844.01.T01:CDS 45.0%
!! GTGTCGACTCTGACATGTAT+CGG + Chr4:10535195-10535214 MsG0480018844.01.T01:intron 45.0%
!! TCACTCAAATCGGTTTGCAC+CGG + Chr4:10537100-10537119 MsG0480018844.01.T01:intron 45.0%
!! TGGTGGCTTTATTGGATCCA+AGG + Chr4:10534884-10534903 MsG0480018844.01.T01:CDS 45.0%
!!! CCGTGGTAGTGTTTGGTTTT+AGG + Chr4:10534716-10534735 MsG0480018844.01.T01:intron 45.0%
!!! GGTGGTTCACTTTTTTGCAG+TGG - Chr4:10540853-10540872 None:intergenic 45.0%
!! AGAAAAATATATAAAATTAA+GGG - Chr4:10539105-10539124 None:intergenic 5.0%
!! TAGAAAAATATATAAAATTA+AGG - Chr4:10539106-10539125 None:intergenic 5.0%
AAATGTTAACCAGTGCCCCC+GGG - Chr4:10540419-10540438 None:intergenic 50.0%
ACACGAACAACCCACCATTG+AGG - Chr4:10533425-10533444 None:intergenic 50.0%
AGTGGCCATGTCGCTAATTG+GGG + Chr4:10533987-10534006 MsG0480018844.01.T01:intron 50.0%
ATCTTGAGTGGTAGACCAGC+AGG + Chr4:10538307-10538326 MsG0480018844.01.T01:intron 50.0%
CGCTTTCTTATCTCCTCAGC+TGG - Chr4:10534644-10534663 None:intergenic 50.0%
CGGTTCTCGATCAGACTTGT+CGG + Chr4:10537202-10537221 MsG0480018844.01.T01:intron 50.0%
GAAAGTTCCCACTTCCCACA+AGG + Chr4:10540766-10540785 MsG0480018844.01.T01:intron 50.0%
GACTCTGAGTATCACCCTCA+CGG - Chr4:10539325-10539344 None:intergenic 50.0%
GAGAGAGCAACGCAACAAAC+TGG + Chr4:10533303-10533322 MsG0480018844.01.T01:CDS 50.0%
GAGCAACGCAACAAACTGGA+AGG + Chr4:10533307-10533326 MsG0480018844.01.T01:CDS 50.0%
GCCAGTAGCTGAGGATGATA+TGG + Chr4:10536392-10536411 MsG0480018844.01.T01:CDS 50.0%
GCTTCCATACGTGTGATGTG+TGG + Chr4:10538500-10538519 MsG0480018844.01.T01:intron 50.0%
GGATGCTAACGCTTCACCTA+TGG + Chr4:10533144-10533163 MsG0480018844.01.T01:CDS 50.0%
GGTATCCTATACCATCCTGC+TGG - Chr4:10538325-10538344 None:intergenic 50.0%
GTAGACCAGCAGGATGGTAT+AGG + Chr4:10538317-10538336 MsG0480018844.01.T01:intron 50.0%
GTGCCTAATGGAATGGTGTG+TGG + Chr4:10539294-10539313 MsG0480018844.01.T01:intron 50.0%
TAAACCAAGGCCAGTAGCTG+AGG + Chr4:10536383-10536402 MsG0480018844.01.T01:CDS 50.0%
TCCACCACACATCACACGTA+TGG - Chr4:10538507-10538526 None:intergenic 50.0%
TCCATACGTGTGATGTGTGG+TGG + Chr4:10538503-10538522 MsG0480018844.01.T01:intron 50.0%
TCCTCACTGCAAAAGAACGC+AGG + Chr4:10533261-10533280 MsG0480018844.01.T01:CDS 50.0%
TCGAGAACCGAACTTATGGC+CGG - Chr4:10537192-10537211 None:intergenic 50.0%
TGAACCGTCACAGTTTGGTC+TGG - Chr4:10534483-10534502 None:intergenic 50.0%
TGGCAATAAACGTGGTGCAG+TGG + Chr4:10541996-10542015 MsG0480018844.01.T01:CDS 50.0%
TGGGAAGGGAGAGAACCTAA+AGG - Chr4:10537404-10537423 None:intergenic 50.0%
TTGCAGTGGCAGATGACCAA+GGG - Chr4:10540839-10540858 None:intergenic 50.0%
TTTGCAGTGGCAGATGACCA+AGG - Chr4:10540840-10540859 None:intergenic 50.0%
! AGGGGAATGCGGTGTTTTGT+CGG + Chr4:10533666-10533685 MsG0480018844.01.T01:intron 50.0%
! GGTTCAGGTAGTGGTGAATC+TGG + Chr4:10541242-10541261 MsG0480018844.01.T01:CDS 50.0%
!! CTTAACCATCCGGTTCTGAG+GGG + Chr4:10533648-10533667 MsG0480018844.01.T01:intron 50.0%
!! GGCTCTGAATGCATTGAACG+TGG - Chr4:10541808-10541827 None:intergenic 50.0%
AACCGTCTTCATGCAGGCCA+CGG + Chr4:10537302-10537321 MsG0480018844.01.T01:intron 55.0%
AATGTTAACCAGTGCCCCCG+GGG - Chr4:10540418-10540437 None:intergenic 55.0%
AGTGTCCGCAGTATGGCTCA+AGG + Chr4:10534024-10534043 MsG0480018844.01.T01:intron 55.0%
CTTCTTTAACCAGTGCCCCC+GGG - Chr4:10540290-10540309 None:intergenic 55.0%
GAACCGAACTTATGGCCGGT+CGG - Chr4:10537188-10537207 None:intergenic 55.0%
GATTGAGAGAGGGGGTTTGG+TGG - Chr4:10533204-10533223 None:intergenic 55.0%
GCTAACAACCCTACCAGCTG+AGG + Chr4:10534628-10534647 MsG0480018844.01.T01:intron 55.0%
GCTTCTTTAACCAGTGCCCC+CGG - Chr4:10540291-10540310 None:intergenic 55.0%
GGAGATTGAGAGAGGGGGTT+TGG - Chr4:10533207-10533226 None:intergenic 55.0%
GGTTCTCTCCCTTCCCATGA+TGG + Chr4:10537407-10537426 MsG0480018844.01.T01:intron 55.0%
GTGGCCATGTCGCTAATTGG+GGG + Chr4:10533988-10534007 MsG0480018844.01.T01:intron 55.0%
GTGTCCGCAGTATGGCTCAA+GGG + Chr4:10534025-10534044 MsG0480018844.01.T01:intron 55.0%
TCTTGTTAACCAGTGCCCCG+GGG + Chr4:10540271-10540290 MsG0480018844.01.T01:intron 55.0%
TGAGTGGTAGACCAGCAGGA+TGG + Chr4:10538311-10538330 MsG0480018844.01.T01:intron 55.0%
TGGCCATGTCGCTAATTGGG+GGG + Chr4:10533989-10534008 MsG0480018844.01.T01:intron 55.0%
TTCTTTAACCAGTGCCCCCG+GGG - Chr4:10540289-10540308 None:intergenic 55.0%
! ATGTGGATGGAGGGCTTTGG+AGG + Chr4:10533810-10533829 MsG0480018844.01.T01:intron 55.0%
! GCCTGCGTTCTTTTGCAGTG+AGG - Chr4:10533265-10533284 None:intergenic 55.0%
! GTCTTGTTAACCAGTGCCCC+GGG + Chr4:10540270-10540289 MsG0480018844.01.T01:intron 55.0%
! TCATCCTCAGCTACTGGCCT+TGG - Chr4:10536390-10536409 None:intergenic 55.0%
!! AGCGTGGTGGTGGATTCCAT+AGG - Chr4:10533163-10533182 None:intergenic 55.0%
!! AGGTGGCGGAGATTGAGAGA+GGG - Chr4:10533214-10533233 None:intergenic 55.0%
!! ATCCGGTTCTGAGGGGAATG+CGG + Chr4:10533655-10533674 MsG0480018844.01.T01:intron 55.0%
!! GGTCTTGTTAACCAGTGCCC+CGG + Chr4:10540269-10540288 MsG0480018844.01.T01:intron 55.0%
!! GTGGAGAGCACCATCCTGTT+TGG + Chr4:10538522-10538541 MsG0480018844.01.T01:intron 55.0%
AGTGAGGATTTCCGGGGAGG+AGG - Chr4:10533249-10533268 None:intergenic 60.0%
CACCGCATTCCCCTCAGAAC+CGG - Chr4:10533660-10533679 None:intergenic 60.0%
CACCGTGGCCTGCATGAAGA+CGG - Chr4:10537307-10537326 None:intergenic 60.0%
CGTGGTGCAGTGGTTCCAGA+AGG + Chr4:10542006-10542025 MsG0480018844.01.T01:CDS 60.0%
CTGACCCTTAACCAGTGCCC+CGG + Chr4:10540398-10540417 MsG0480018844.01.T01:intron 60.0%
CTTGTTAACCAGTGCCCCGG+GGG + Chr4:10540272-10540291 MsG0480018844.01.T01:intron 60.0%
GCATTCCCCTCAGAACCGGA+TGG - Chr4:10533656-10533675 None:intergenic 60.0%
GCTCCCCCCAATTAGCGACA+TGG - Chr4:10533995-10534014 None:intergenic 60.0%
GCTCCGACCGGCCATAAGTT+CGG + Chr4:10537182-10537201 MsG0480018844.01.T01:intron 60.0%
TCGCTAATTGGGGGGAGCGA+GGG + Chr4:10533997-10534016 MsG0480018844.01.T01:intron 60.0%
TGACCCTTAACCAGTGCCCC+GGG + Chr4:10540399-10540418 MsG0480018844.01.T01:intron 60.0%
TGCAGTGAGGATTTCCGGGG+AGG - Chr4:10533252-10533271 None:intergenic 60.0%
! AGAGAGGGGGTGTAGAAGCG+TGG - Chr4:10533179-10533198 None:intergenic 60.0%
! GTGGCGGAGATTGAGAGAGG+GGG - Chr4:10533212-10533231 None:intergenic 60.0%
!! AGGGGGTTTGGTGGAGAGAG+AGG - Chr4:10533195-10533214 None:intergenic 60.0%
!! ATGGAGGGCTTTGGAGGCAG+AGG + Chr4:10533816-10533835 MsG0480018844.01.T01:intron 60.0%
!! GAGGTGGCGGAGATTGAGAG+AGG - Chr4:10533215-10533234 None:intergenic 60.0%
!! GGGGGTTTGGTGGAGAGAGA+GGG - Chr4:10533194-10533213 None:intergenic 60.0%
!! GGGGTTTGGTGGAGAGAGAG+GGG - Chr4:10533193-10533212 None:intergenic 60.0%
!! GGGTTTGGTGGAGAGAGAGG+GGG - Chr4:10533192-10533211 None:intergenic 60.0%
!! GGTGGCGGAGATTGAGAGAG+GGG - Chr4:10533213-10533232 None:intergenic 60.0%
!! TGGAGGGCTTTGGAGGCAGA+GGG + Chr4:10533817-10533836 MsG0480018844.01.T01:intron 60.0%
ACCCTTAACCAGTGCCCCGG+GGG + Chr4:10540401-10540420 MsG0480018844.01.T01:intron 65.0%
CGCTAATTGGGGGGAGCGAG+GGG + Chr4:10533998-10534017 MsG0480018844.01.T01:intron 65.0%
CTAATTGGGGGGAGCGAGGG+GGG + Chr4:10534000-10534019 MsG0480018844.01.T01:intron 65.0%
GACCCTTAACCAGTGCCCCG+GGG + Chr4:10540400-10540419 MsG0480018844.01.T01:intron 65.0%
GAGGATTTCCGGGGAGGAGG+TGG - Chr4:10533246-10533265 None:intergenic 65.0%
GATTTCCGGGGAGGAGGTGG+AGG - Chr4:10533243-10533262 None:intergenic 65.0%
GCTAATTGGGGGGAGCGAGG+GGG + Chr4:10533999-10534018 MsG0480018844.01.T01:intron 65.0%
GGTGTGTGGTGAGGCCGTGA+GGG + Chr4:10539308-10539327 MsG0480018844.01.T01:intron 65.0%
GTCGCTAATTGGGGGGAGCG+AGG + Chr4:10533996-10534015 MsG0480018844.01.T01:intron 65.0%
TGGTGTGTGGTGAGGCCGTG+AGG + Chr4:10539307-10539326 MsG0480018844.01.T01:intron 65.0%
! GAGGGGGTGTAGAAGCGTGG+TGG - Chr4:10533176-10533195 None:intergenic 65.0%
! GGGGTGTAGAAGCGTGGTGG+TGG - Chr4:10533173-10533192 None:intergenic 65.0%
!! GGGGGGAAGTGTCCGCAGTA+TGG + Chr4:10534017-10534036 MsG0480018844.01.T01:intron 65.0%
CGGGGAGGAGGTGGAGGTGA+CGG - Chr4:10533237-10533256 None:intergenic 70.0%
CGTCACCTCCACCTCCTCCC+CGG + Chr4:10533235-10533254 MsG0480018844.01.T01:CDS 70.0%
! GGAGGAGGTGGAGGTGACGG+AGG - Chr4:10533234-10533253 None:intergenic 70.0%
!! GCCCCCGGGGCACTGGTTAA+GGG - Chr4:10540276-10540295 None:intergenic 70.0%
!! GGAGGTGGAGGTGACGGAGG+TGG - Chr4:10533231-10533250 None:intergenic 70.0%
!! GGTGGAGGTGACGGAGGTGG+CGG - Chr4:10533228-10533247 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - Chr4:10540277-10540296 None:intergenic 70.0%
AACCAGTGCCCCCGGGGCAC+TGG - Chr4:10540283-10540302 None:intergenic 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG + Chr4:10540278-10540297 MsG0480018844.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 10533087 10542113 10533087 ID=MsG0480018844.01;Name=MsG0480018844.01
Chr4 mRNA 10533087 10542113 10533087 ID=MsG0480018844.01.T01;Parent=MsG0480018844.01;Name=MsG0480018844.01.T01;_AED=0.49;_eAED=0.49;_QI=50|0.5|0.6|1|1|1|5|0|600
Chr4 exon 10533087 10533523 10533087 ID=MsG0480018844.01.T01:exon:3036;Parent=MsG0480018844.01.T01
Chr4 exon 10534738 10534916 10534738 ID=MsG0480018844.01.T01:exon:3037;Parent=MsG0480018844.01.T01
Chr4 exon 10536368 10536731 10536368 ID=MsG0480018844.01.T01:exon:3038;Parent=MsG0480018844.01.T01
Chr4 exon 10541179 10541416 10541179 ID=MsG0480018844.01.T01:exon:3039;Parent=MsG0480018844.01.T01
Chr4 exon 10541479 10542113 10541479 ID=MsG0480018844.01.T01:exon:3040;Parent=MsG0480018844.01.T01
Chr4 five_prime_UTR 10533087 10533136 10533087 ID=MsG0480018844.01.T01:five_prime_utr;Parent=MsG0480018844.01.T01
Chr4 CDS 10533137 10533523 10533137 ID=MsG0480018844.01.T01:cds;Parent=MsG0480018844.01.T01
Chr4 CDS 10534738 10534916 10534738 ID=MsG0480018844.01.T01:cds;Parent=MsG0480018844.01.T01
Chr4 CDS 10536368 10536731 10536368 ID=MsG0480018844.01.T01:cds;Parent=MsG0480018844.01.T01
Chr4 CDS 10541179 10541416 10541179 ID=MsG0480018844.01.T01:cds;Parent=MsG0480018844.01.T01
Chr4 CDS 10541479 10542113 10541479 ID=MsG0480018844.01.T01:cds;Parent=MsG0480018844.01.T01
Gene Sequence

>MsG0480018844.01.T01

ATGAAAGGGATGCTAACGCTTCACCTATGGAATCCACCACCACGCTTCTACACCCCCTCTCTCTCCACCAAACCCCCTCTCTCAATCTCCGCCACCTCCGTCACCTCCACCTCCTCCCCGGAAATCCTCACTGCAAAAGAACGCAGGCGCTTACGCAACGAACGAAGAGAGAGCAACGCAACAAACTGGAAGGAAGAAGTTGAAAATAAACTCATTCAGAAAACCAAAAAAGAGAATAAATCATGGATGGATGAACTCAACCTTGATAATCTCATGAAGTTAGGTCCTCAATGGTGGGTTGTTCGTGTTTCTCGTGTTAAGGGTCAGTATACTGCTGAAGCTCTTGCTCGTTCTTTGGCTAAGTTTTTTCCTGATATCGATTTTAAGGTATATGCTCCAGCTATCCATGAGAAAAAGAGATTGAAGAGTGGTTCCATCTCTGTAAAATCAAAACCTCTGTTCCCGGGTTGTATTTTTCTGAGATGCGAACTGAACAAACCATTACATGACTACATAAAAGAGTATGAAGGTGTTGGTGGCTTTATTGGATCCAAGGTTGGAAATACAAAAAGGCAGATTAATAAACCAAGGCCAGTAGCTGAGGATGATATGGAAGCAATCTTCAAACAGGCAAAGGTGGAGCAAGAAAATGCTGACAAAGCATTTGAAGAAGAAGAAGAAGAGAAAAAGGCTGTCGCAAACTCTGGGAATCCCAATAAAGAGTTAGAATTGGATGTTTCGAAAGCTATTGTCGAATCAAAGCCTAAAAGGGGCTCTAGAAAAACCTCTAACCAACTAACAGTCACAGAAGAAGCTTCATCAGCTAAAAAAAAACCTAAACTTGTAACAGGTTCTGCTGTTCGAATTATATCCGGATCATTTTTAGGGTTTGCAGGCACTCTCAAGAAGCTGAACCGCAAAACCAAAATGTCCAATGTTGGAATTTATGGTAATGCAAAAATTGTCAATGGTGAGTCCAAGATTCAATTCTCTGGTTCAGGTAGTGGTGAATCTGGGAGAGTGATTTACAAGAAACCCATCAAGGTTTTTCAAGGTAAACCTAAGCAATTAGTTTCATTTTCAACTTATTTTACATTTTCAATCTCAATGGAAAATGAGGGTGGTTTAGCTTTTGTTATGATTCCAAATGGTGTTAAAAGTGTTAAAGGTATTAGTGTTGAGTTTGGTGGTTATAAGGATGGTAAAAATGAGATTTTGATTAGAAATGGTGTTTCAAGTGAAAGTTACTTTACCAATTTGGCACTAAAAAGTGGTGAAAAGTTGCATACTTGGATTGATTATGAAGCAAGTTCAAGGAGGTTAGAAGTGAGATTGAGTAAACATGGAAATTCAAAGCCATTGGATCCATTGTTATGGCACAAAATTGACATATCTAATGTCTTGAAGGAGGAAGAAATGTTTGTTGGTTTTAATCATGTGAAGGGGAATAATGCTTTTCTGTATTCATGGAGCTTTGTTATGAGAAATTTTCCACCACGTTCAATGCATTCAGAGCCACTTGATCCTAATGTTTCTGTTAAAAAGAGTGAAACTTCAATGGTTGTTAAACCAAAGGAAAAGGCAAAGAAGAATGATTGTGTTTTAAGAGTTCTTGCTGCAATGATATTTGGTACTGGTTGTGGAGCATTGACAGCATTCACTGTGCTTTATTTGTGGACAATCTTTGGCAATAAACGTGGTGCAGTGGTTCCAGAAGGATGTTCTATGCAACCTTTAGATGTTGAGTATAGGAAAGTTAAAATTGTTGTAGATAATAAAACCATTGGAGATGGTAATAAGTAG

Protein sequence

>MsG0480018844.01.T01

MKGMLTLHLWNPPPRFYTPSLSTKPPLSISATSVTSTSSPEILTAKERRRLRNERRESNATNWKEEVENKLIQKTKKENKSWMDELNLDNLMKLGPQWWVVRVSRVKGQYTAEALARSLAKFFPDIDFKVYAPAIHEKKRLKSGSISVKSKPLFPGCIFLRCELNKPLHDYIKEYEGVGGFIGSKVGNTKRQINKPRPVAEDDMEAIFKQAKVEQENADKAFEEEEEEKKAVANSGNPNKELELDVSKAIVESKPKRGSRKTSNQLTVTEEASSAKKKPKLVTGSAVRIISGSFLGFAGTLKKLNRKTKMSNVGIYGNAKIVNGESKIQFSGSGSGESGRVIYKKPIKVFQGKPKQLVSFSTYFTFSISMENEGGLAFVMIPNGVKSVKGISVEFGGYKDGKNEILIRNGVSSESYFTNLALKSGEKLHTWIDYEASSRRLEVRLSKHGNSKPLDPLLWHKIDISNVLKEEEMFVGFNHVKGNNAFLYSWSFVMRNFPPRSMHSEPLDPNVSVKKSETSMVVKPKEKAKKNDCVLRVLAAMIFGTGCGALTAFTVLYLWTIFGNKRGAVVPEGCSMQPLDVEYRKVKIVVDNKTIGDGNK*