AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011074.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011074.01.T01 MTR_2g097670 83.475 587 42 6 14 553 454 1032 0.0 961
MsG0280011074.01.T01 MTR_4g064670 74.542 601 90 10 5 553 421 1010 0.0 842
MsG0280011074.01.T01 MTR_4g064670 74.735 566 85 7 36 553 384 939 0.0 803
MsG0280011074.01.T01 MTR_2g097670 81.585 467 67 6 14 469 454 912 0.0 750
MsG0280011074.01.T01 MTR_2g097670 22.989 174 128 1 376 549 710 877 4.35e-13 72.8
MsG0280011074.01.T01 MTR_5g080390 56.449 597 186 13 8 553 419 992 0.0 602
MsG0280011074.01.T01 MTR_1g094630 49.464 560 223 13 44 553 413 962 1.82e-160 484
MsG0280011074.01.T01 MTR_2g036900 42.832 579 243 20 35 550 420 973 2.89e-118 374
MsG0280011074.01.T01 MTR_1g094630 42.760 442 229 13 42 469 411 842 2.95e-94 308
MsG0280011074.01.T01 MTR_1g094630 28.571 203 135 5 347 546 646 841 2.45e-17 86.7
MsG0280011074.01.T01 MTR_1g094630 24.551 167 120 1 383 549 647 807 1.62e-11 67.8
MsG0280011074.01.T01 MTR_2g036900 40.304 526 226 20 35 497 420 920 2.08e-89 296
MsG0280011074.01.T01 MTR_2g036900 25.862 174 123 1 376 549 654 821 1.52e-14 77.8
MsG0280011074.01.T01 MTR_1g094630 38.922 334 182 11 42 363 442 765 4.99e-50 186
MsG0280011074.01.T01 MTR_2g008770 24.219 512 294 14 107 553 261 743 4.23e-34 138
MsG0280011074.01.T01 MTR_5g063650 29.524 315 164 9 286 549 401 708 4.24e-29 123
MsG0280011074.01.T01 MTR_1g106975 24.430 307 172 6 296 547 147 448 4.00e-15 78.6
MsG0280011074.01.T01 MTR_2g006930 22.297 296 197 5 254 547 157 421 2.67e-14 75.9
MsG0280011074.01.T01 MTR_1g100230 24.046 262 167 4 288 547 174 405 5.90e-14 74.7
MsG0280011074.01.T01 MTR_5g062070 24.219 256 175 6 291 532 35 285 1.47e-13 72.8
MsG0280011074.01.T01 MTR_3g102650 20.447 313 191 8 291 550 222 529 2.43e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011074.01.T01 AT2G29190 60.333 600 156 15 5 553 386 954 0.0 644
MsG0280011074.01.T01 AT2G29190 60.333 600 156 15 5 553 386 954 0.0 644
MsG0280011074.01.T01 AT2G29200 58.070 601 169 14 5 553 381 950 0.0 623
MsG0280011074.01.T01 AT2G29200 58.070 601 169 14 5 553 381 950 0.0 623
MsG0280011074.01.T01 AT2G29140 58.167 600 171 16 5 553 376 946 0.0 616
MsG0280011074.01.T01 AT2G29140 58.167 600 171 16 5 553 376 946 0.0 616
MsG0280011074.01.T01 AT3G10360 49.806 516 180 12 87 553 499 984 8.99e-145 444
MsG0280011074.01.T01 AT3G20250 47.608 418 155 8 192 553 491 900 1.23e-113 361
MsG0280011074.01.T01 AT3G20250 47.608 418 155 8 192 553 527 936 2.32e-113 361
MsG0280011074.01.T01 AT3G20250 47.608 418 155 8 192 553 527 936 2.32e-113 361
MsG0280011074.01.T01 AT4G25880 51.592 314 105 3 290 556 542 855 1.92e-99 322
MsG0280011074.01.T01 AT4G25880 26.286 175 121 3 376 549 530 697 1.76e-13 74.3
MsG0280011074.01.T01 AT4G25880 51.592 314 105 3 290 556 542 855 1.92e-99 322
MsG0280011074.01.T01 AT4G25880 26.286 175 121 3 376 549 530 697 1.76e-13 74.3
MsG0280011074.01.T01 AT4G25880 52.104 309 101 3 290 551 542 850 2.85e-99 322
MsG0280011074.01.T01 AT4G25880 26.286 175 121 3 376 549 530 697 1.66e-13 74.3
MsG0280011074.01.T01 AT4G25880 51.133 309 104 3 295 556 541 849 5.02e-96 313
MsG0280011074.01.T01 AT4G25880 51.645 304 100 3 295 551 541 844 7.35e-96 312
MsG0280011074.01.T01 AT1G22240 26.582 316 176 7 283 548 201 510 9.46e-33 132
MsG0280011074.01.T01 AT1G78160 26.582 316 176 8 283 548 336 645 7.91e-30 125
MsG0280011074.01.T01 AT1G78160 26.582 316 176 8 283 548 338 647 9.06e-30 125
MsG0280011074.01.T01 AT5G56510 26.667 315 177 6 283 547 280 590 8.42e-29 121
MsG0280011074.01.T01 AT5G56510 26.667 315 177 6 283 547 280 590 8.42e-29 121
MsG0280011074.01.T01 AT5G56510 26.667 315 177 6 283 547 280 590 8.42e-29 121
MsG0280011074.01.T01 AT5G56510 26.667 315 177 6 283 547 280 590 8.42e-29 121
MsG0280011074.01.T01 AT5G56510 26.667 315 177 6 283 547 280 590 8.42e-29 121
MsG0280011074.01.T01 AT1G35730 27.419 310 168 8 291 548 260 564 2.42e-26 114
MsG0280011074.01.T01 AT1G35730 27.419 310 168 8 291 548 266 570 3.03e-26 113
MsG0280011074.01.T01 AT4G08840 26.786 336 191 9 261 548 223 551 4.69e-26 113
MsG0280011074.01.T01 AT5G56510 27.208 283 152 6 283 515 280 558 1.10e-24 108
MsG0280011074.01.T01 AT1G35750 28.803 309 162 10 291 549 224 524 1.49e-24 108
MsG0280011074.01.T01 AT5G43090 21.118 322 192 7 283 549 211 525 1.09e-11 68.2

Find 149 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGCTTTCTGAAATTTC+TGG 0.119870 2:-79148996 MsG0280011074.01.T01:CDS
GAGTTAGCCAACAAGCTTTA+TGG 0.162586 2:-79148608 MsG0280011074.01.T01:CDS
TCCAACCATCATGGTTATTA+TGG 0.209780 2:-79149255 MsG0280011074.01.T01:CDS
CTGGTCATGTTGTTGAATTC+AGG 0.227637 2:-79148977 MsG0280011074.01.T01:CDS
GAGTTTGCCATTGGACTTCC+TGG 0.240216 2:+79149202 None:intergenic
AATTCACCATTTAATAACTA+TGG 0.283508 2:-79149730 MsG0280011074.01.T01:CDS
CTCAGGCCATAGTTATTAAA+TGG 0.313207 2:+79149724 None:intergenic
AAACCACCTCCACCACTATA+AGG 0.316731 2:+79149784 None:intergenic
AGAAAAGAATATGGTTTATC+AGG 0.319439 2:-79148803 MsG0280011074.01.T01:CDS
GAACATCACCACGCTATAAA+AGG 0.324755 2:+79148950 None:intergenic
CTTGGAGGTGGTTTGCCCTC+TGG 0.330027 2:-79149562 MsG0280011074.01.T01:CDS
ATTGGCAGTGCTGATCAATA+TGG 0.338609 2:-79148868 MsG0280011074.01.T01:intron
AGAATTCTTGAGTCCATTCC+AGG 0.343201 2:+79149583 None:intergenic
TCTGGACCAGAAGATTAAAA+TGG 0.343695 2:-79148425 MsG0280011074.01.T01:CDS
GGATGAAAATGAGCCTCTTC+AGG 0.344030 2:-79147256 MsG0280011074.01.T01:intron
TTGGATCTGGCAGTCCTATT+AGG 0.345867 2:-79149162 MsG0280011074.01.T01:CDS
CAGAAGCAAAATGCATATTC+AGG 0.354543 2:+79149131 None:intergenic
GGAATGGACTCAAGAATTCT+TGG 0.354552 2:-79149580 MsG0280011074.01.T01:CDS
TTCAGGTCATTGTGCCTAAT+AGG 0.357554 2:+79149148 None:intergenic
AACCACTGAAGAAAAGAATA+TGG 0.364988 2:-79148812 MsG0280011074.01.T01:CDS
TCCTGCTGTGGCATCCTTCA+TGG 0.369127 2:-79149683 MsG0280011074.01.T01:CDS
ACACTTCTCCACAACATTAG+AGG 0.374528 2:+79147338 None:intergenic
CAACCCATCCATATGGTTGC+CGG 0.384834 2:-79148261 MsG0280011074.01.T01:CDS
TCCACTTCTCCAGTTGGATC+TGG 0.397655 2:-79149175 MsG0280011074.01.T01:CDS
ATAAAATCAATTGCATCTTC+AGG 0.398406 2:+79148319 None:intergenic
CTCGACAACCATACATTTGA+AGG 0.401988 2:+79148567 None:intergenic
GTGGAGAAGTGTTTGACCTT+TGG 0.406252 2:-79147327 MsG0280011074.01.T01:CDS
GAGCTTCAGAAAGCATATCT+TGG 0.413464 2:-79149340 MsG0280011074.01.T01:CDS
ATTAATGCATCATGTGTGTT+TGG 0.417342 2:-79146577 MsG0280011074.01.T01:CDS
AACCACCTCCACCACTATAA+GGG 0.417360 2:+79149785 None:intergenic
CTGGTCCAGATCAACTTCTA+TGG 0.418678 2:+79148438 None:intergenic
GCTTTGATGACCGATGTCTT+TGG 0.420200 2:-79148760 MsG0280011074.01.T01:CDS
AGAATGGGAAATCAAATTGC+AGG 0.421672 2:-79149505 MsG0280011074.01.T01:CDS
GGCCTGAGTGGTGGGTATGC+TGG 0.429121 2:-79149709 MsG0280011074.01.T01:CDS
ACACTTAGCCTTCAAATGTA+TGG 0.431661 2:-79148575 MsG0280011074.01.T01:CDS
CATCTACGTTTCCAGCATCT+AGG 0.434874 2:+79149071 None:intergenic
TTAGGCCATAGAAGTTGATC+TGG 0.438315 2:-79148443 MsG0280011074.01.T01:intron
TGTATCACCCGGCAACCATA+TGG 0.439118 2:+79148253 None:intergenic
ATATGGTTGCCGGGTGATAC+AGG 0.446850 2:-79148251 MsG0280011074.01.T01:intron
TGCTGCAGCATCAGCTATGT+GGG 0.453140 2:-79149611 MsG0280011074.01.T01:CDS
ATCTGTAGACAGGAATTACT+TGG 0.453537 2:-79149386 MsG0280011074.01.T01:CDS
TCCAAGTTGGTTAGCCATGA+AGG 0.455908 2:+79149669 None:intergenic
ATGGCTAACCAACTTGGAAC+TGG 0.455921 2:-79149664 MsG0280011074.01.T01:CDS
ATAGGACTGCCAGATCCAAC+TGG 0.456552 2:+79149166 None:intergenic
GAGAAGTGTTTGACCTTTGG+AGG 0.460349 2:-79147324 MsG0280011074.01.T01:CDS
TCTTTATCCACTTCTCCAGT+TGG 0.460661 2:-79149181 MsG0280011074.01.T01:CDS
TCCTTCATGGCTAACCAACT+TGG 0.462350 2:-79149670 MsG0280011074.01.T01:CDS
GGTGTTGGTTTGTCTTATCC+AGG 0.464786 2:-79149220 MsG0280011074.01.T01:CDS
GTCACAATACAATGTTCCAT+TGG 0.466232 2:-79149296 MsG0280011074.01.T01:CDS
CACACTGGCTCCCCTTATAG+TGG 0.469156 2:-79149796 MsG0280011074.01.T01:CDS
TCAGCTATGTGGGCGTCCCC+TGG 0.476479 2:-79149601 MsG0280011074.01.T01:CDS
GCATCTCATTTACAAGCAAT+AGG 0.484300 2:+79147289 None:intergenic
TCCCCTTATAGTGGTGGAGG+TGG 0.486724 2:-79149787 MsG0280011074.01.T01:CDS
GCACCATGGCACCTAGATGC+TGG 0.486752 2:-79149082 MsG0280011074.01.T01:CDS
AAAATGGTTCAAGAGCTTGA+TGG 0.487490 2:-79148409 MsG0280011074.01.T01:CDS
GGCTCCCCTTATAGTGGTGG+AGG 0.487949 2:-79149790 MsG0280011074.01.T01:CDS
AACATGGCCATAAAGCTTGT+TGG 0.488641 2:+79148601 None:intergenic
GACTCAAGAATTCTTGGAGG+TGG 0.489951 2:-79149574 MsG0280011074.01.T01:CDS
ACACTATCAACCCATCCATA+TGG 0.502240 2:-79148268 MsG0280011074.01.T01:CDS
TTGCTTGTAAATGAGATGCT+TGG 0.503439 2:-79147285 MsG0280011074.01.T01:CDS
TGCTAATTATGTTGTACAGA+AGG 0.505438 2:-79146770 MsG0280011074.01.T01:CDS
AAGTTGTGCAGCAGCATACT+CGG 0.508196 2:+79149426 None:intergenic
GTGGATAAAGAGTTTGCCAT+TGG 0.508321 2:+79149193 None:intergenic
CGATGTCTTTGGTAATTATG+TGG 0.509063 2:-79148749 MsG0280011074.01.T01:CDS
TTGGCAGTGCTGATCAATAT+GGG 0.509849 2:-79148867 MsG0280011074.01.T01:intron
AACCCATCCATATGGTTGCC+GGG 0.512730 2:-79148260 MsG0280011074.01.T01:CDS
TCCATAATAACCATGATGGT+TGG 0.516567 2:+79149254 None:intergenic
TTATGTTGTACAGAAGGTGC+TGG 0.516780 2:-79146764 MsG0280011074.01.T01:CDS
TCACAATACAATGTTCCATT+GGG 0.519367 2:-79149295 MsG0280011074.01.T01:CDS
AGATACATCGGATCAACATA+AGG 0.522156 2:+79149466 None:intergenic
CTGGAATGAGGAATGTAGCT+GGG 0.523898 2:-79149111 MsG0280011074.01.T01:CDS
ACAATCATCAAGGAATTAGC+AGG 0.524000 2:-79147393 MsG0280011074.01.T01:CDS
CATTAGAGGCAAACTTCTGC+TGG 0.527514 2:+79147352 None:intergenic
TAACAGCATGTGCTTGAGCA+TGG 0.531524 2:-79147435 MsG0280011074.01.T01:intron
TGGAATCCTGCATATGGTGT+TGG 0.532253 2:-79149235 MsG0280011074.01.T01:CDS
GTGCATGTTCTCAGTAGAAT+GGG 0.532346 2:-79149520 MsG0280011074.01.T01:CDS
TATGTGGGCGTCCCCTGGAA+TGG 0.534327 2:-79149596 MsG0280011074.01.T01:CDS
GCCATGAAGGATGCCACAGC+AGG 0.534596 2:+79149682 None:intergenic
AAGTAATTCCTGTCTACAGA+TGG 0.536090 2:+79149388 None:intergenic
GAGGAATGTAGCTGGGGTCA+TGG 0.537425 2:-79149104 MsG0280011074.01.T01:CDS
TGGTAATTATGTGGTTCAGA+AGG 0.538547 2:-79148740 MsG0280011074.01.T01:intron
GCCAGATCCAACTGGAGAAG+TGG 0.539436 2:+79149174 None:intergenic
AAAACTCAATAGAGCATGCA+TGG 0.544219 2:+79146530 None:intergenic
TCACCCGGCAACCATATGGA+TGG 0.544504 2:+79148257 None:intergenic
GACAAACCAACACCATATGC+AGG 0.544864 2:+79149229 None:intergenic
AATAACTATGGCCTGAGTGG+TGG 0.545392 2:-79149718 MsG0280011074.01.T01:CDS
AATTAGAACCATCTGAAGGC+TGG 0.549671 2:+79149749 None:intergenic
AAAATAAGTATAAGTCCCTC+CGG 0.549981 2:+79146622 None:intergenic
CCGTGGTGTTCCAACCATCA+TGG 0.550467 2:-79149264 MsG0280011074.01.T01:CDS
AAAGAATTAGTTCACGCTGT+TGG 0.551100 2:+79146728 None:intergenic
TCTGAAGGCTGGTATTGTGC+AGG 0.551183 2:+79149760 None:intergenic
AACAGCATGTGCTTGAGCAT+GGG 0.553226 2:-79147434 MsG0280011074.01.T01:intron
GCATATTACCAGTTCCAAGT+TGG 0.553748 2:+79149656 None:intergenic
TTAACGACCCATCTGTAGAC+AGG 0.559842 2:-79149396 MsG0280011074.01.T01:CDS
GGATTCCATAATAACCATGA+TGG 0.562489 2:+79149250 None:intergenic
AAATGAGATGCTTGGAACTA+CGG 0.563713 2:-79147277 MsG0280011074.01.T01:CDS
CTGAGAACATGCACATCAGA+TGG 0.563732 2:+79149529 None:intergenic
ATAACTATGGCCTGAGTGGT+GGG 0.564056 2:-79149717 MsG0280011074.01.T01:CDS
GTGCTGATCAATATGGGAGC+CGG 0.565045 2:-79148861 MsG0280011074.01.T01:CDS
TCTGGAATGAGGAATGTAGC+TGG 0.565866 2:-79149112 MsG0280011074.01.T01:CDS
GCATGGAACGCAACTAGCAA+CGG 0.567454 2:+79146547 None:intergenic
TGTGCATGTTCTCAGTAGAA+TGG 0.570940 2:-79149521 MsG0280011074.01.T01:CDS
TTATTATGGAATCCTGCATA+TGG 0.579305 2:-79149241 MsG0280011074.01.T01:CDS
ACAAGCAATAGGCGTTCAGA+AGG 0.579596 2:+79147300 None:intergenic
CAATACACTTCTGAATGACA+TGG 0.580271 2:+79148350 None:intergenic
CACCCGGCAACCATATGGAT+GGG 0.580941 2:+79148258 None:intergenic
ACTGGCTCCCCTTATAGTGG+TGG 0.581098 2:-79149793 MsG0280011074.01.T01:CDS
CTGCTGCAGCATCAGCTATG+TGG 0.586446 2:-79149612 MsG0280011074.01.T01:CDS
ATGGACTCAAGAATTCTTGG+AGG 0.591427 2:-79149577 MsG0280011074.01.T01:CDS
GATGGAGAAGCAACTCCAGA+GGG 0.593235 2:+79149547 None:intergenic
ACCACCTCCACCACTATAAG+GGG 0.593482 2:+79149786 None:intergenic
GTCTTATCCAGGAAGTCCAA+TGG 0.595595 2:-79149209 MsG0280011074.01.T01:CDS
TGAGCGTTCTACAATCATCA+AGG 0.599538 2:-79147403 MsG0280011074.01.T01:CDS
GAATTCTTGAGTCCATTCCA+GGG 0.599791 2:+79149584 None:intergenic
GCACAATACCAGCCTTCAGA+TGG 0.601016 2:-79149757 MsG0280011074.01.T01:CDS
GAAGTTTGCCTCTAATGTTG+TGG 0.602808 2:-79147346 MsG0280011074.01.T01:CDS
TTTCCAGCATCTAGGTGCCA+TGG 0.603193 2:+79149079 None:intergenic
AGTTGTGCAGCAGCATACTC+GGG 0.603765 2:+79149427 None:intergenic
GTCATCAAAGCAAGAGCATG+TGG 0.606191 2:+79148772 None:intergenic
GAAGGCTAAGTGTCAGAACA+TGG 0.607532 2:+79148585 None:intergenic
AGTAATTCCTGTCTACAGAT+GGG 0.607600 2:+79149389 None:intergenic
ACCACGGATTTACCACCCAA+TGG 0.610611 2:+79149280 None:intergenic
CGCTGTGTACGAGATCAGAA+TGG 0.610763 2:-79148376 MsG0280011074.01.T01:CDS
TTCCAGCATACCCACCACTC+AGG 0.611254 2:+79149707 None:intergenic
CGATGTATCTTCAGTACATG+AGG 0.611331 2:-79149453 MsG0280011074.01.T01:CDS
GGAACGCAACTAGCAACGGC+GGG 0.615833 2:+79146551 None:intergenic
CAATACAATGTTCCATTGGG+TGG 0.619426 2:-79149292 MsG0280011074.01.T01:CDS
TTTAATAACTATGGCCTGAG+TGG 0.620041 2:-79149721 MsG0280011074.01.T01:CDS
CTCATGTACTGAAGATACAT+CGG 0.626468 2:+79149454 None:intergenic
GTATGCTGGAAATCCTGCTG+TGG 0.630526 2:-79149695 MsG0280011074.01.T01:CDS
GCGTTCAGAAGGACCTCCAA+AGG 0.633901 2:+79147311 None:intergenic
AAAGGAAAAGAAACCTGAAG+AGG 0.634760 2:+79147243 None:intergenic
GGTGAATTAGAACCATCTGA+AGG 0.639525 2:+79149745 None:intergenic
CACATAATTACCAAAGACAT+CGG 0.640601 2:+79148750 None:intergenic
ATGATTGTAGAACGCTCATG+AGG 0.641163 2:+79147408 None:intergenic
TGGAATGAGGAATGTAGCTG+GGG 0.642831 2:-79149110 MsG0280011074.01.T01:CDS
TCTGTAGACAGGAATTACTT+GGG 0.655499 2:-79149385 MsG0280011074.01.T01:CDS
TGTATTTCAATGGATCACAC+TGG 0.656672 2:-79149811 None:intergenic
AGCGACAATATGTTTCCCAT+AGG 0.660900 2:+79146666 None:intergenic
TAGCTGGGGTCATGGCACCA+TGG 0.661015 2:-79149096 MsG0280011074.01.T01:CDS
AATTCTTGAGTCCATTCCAG+GGG 0.665267 2:+79149585 None:intergenic
CCATGATGGTTGGAACACCA+CGG 0.666358 2:+79149264 None:intergenic
TGGAACGCAACTAGCAACGG+CGG 0.668625 2:+79146550 None:intergenic
ATGGGAAATCAAATTGCAGG+TGG 0.674760 2:-79149502 MsG0280011074.01.T01:CDS
TCCATTGGGTGGTAAATCCG+TGG 0.675445 2:-79149281 MsG0280011074.01.T01:CDS
AGATGGAGAAGCAACTCCAG+AGG 0.676390 2:+79149546 None:intergenic
ACATCTTTACCTGTATCACC+CGG 0.691610 2:+79148242 None:intergenic
TGGTTGTCGAGTCATCCAGA+AGG 0.705947 2:-79148555 MsG0280011074.01.T01:intron
ACATTGTATTGTGACTTCTG+AGG 0.707222 2:+79149304 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATAATTTTCTCTTAT+TGG - Chr2:79147414-79147433 MsG0280011074.01.T01:CDS 10.0%
!!! TTTTTTATTTCTATATCTTT+AGG - Chr2:79147839-79147858 MsG0280011074.01.T01:intron 10.0%
!! AAACTAATCATTTAATATTG+TGG + Chr2:79148584-79148603 None:intergenic 15.0%
!! AAATTATTAACAGCTATTAA+AGG + Chr2:79149078-79149097 None:intergenic 15.0%
!! AAGATCTATATATTTATGAA+TGG + Chr2:79147612-79147631 None:intergenic 15.0%
!! TGTTATGAATTATTATAAAC+TGG + Chr2:79148262-79148281 None:intergenic 15.0%
!!! AGTTTTTAGATTTTGTTTTA+TGG - Chr2:79148599-79148618 MsG0280011074.01.T01:CDS 15.0%
!!! GTTTTTAGATTTTGTTTTAT+GGG - Chr2:79148600-79148619 MsG0280011074.01.T01:CDS 15.0%
!! AATTCACCATTTAATAACTA+TGG - Chr2:79146570-79146589 MsG0280011074.01.T01:CDS 20.0%
! AATTTAACGTTTGAACAGAA+TGG - Chr2:79149334-79149353 MsG0280011074.01.T01:CDS 25.0%
! AGAAAAGAATATGGTTTATC+AGG - Chr2:79147497-79147516 MsG0280011074.01.T01:intron 25.0%
! AGTAAATATGACACGATAAA+AGG + Chr2:79148804-79148823 None:intergenic 25.0%
! AGTGAAGCAAATCAATAAAA+CGG + Chr2:79148488-79148507 None:intergenic 25.0%
! ATAAAATCAATTGCATCTTC+AGG + Chr2:79147984-79148003 None:intergenic 25.0%
! TGTTCAAACGTTAAATTACA+TGG + Chr2:79149331-79149350 None:intergenic 25.0%
! TTATTACTCTGTCTCTATAT+TGG - Chr2:79147586-79147605 MsG0280011074.01.T01:intron 25.0%
!! AAAGTTATGGATGAGATTTT+AGG - Chr2:79148191-79148210 MsG0280011074.01.T01:intron 25.0%
!! AATTTTGTCAAAACATACTG+AGG + Chr2:79149436-79149455 None:intergenic 25.0%
!! ACAAAGCATTATGATTGTTA+GGG + Chr2:79148338-79148357 None:intergenic 25.0%
!! TTGTGAAGTTTTCTTCATTA+TGG - Chr2:79148354-79148373 MsG0280011074.01.T01:CDS 25.0%
!!! CGAATATTATTTTAAGTCCT+CGG + Chr2:79149217-79149236 None:intergenic 25.0%
!!! CGCGATTTTTTTTTTTTTGA+AGG + Chr2:79149386-79149405 None:intergenic 25.0%
!!! TGTAATACGTTTTATTTGCA+TGG - Chr2:79148126-79148145 MsG0280011074.01.T01:intron 25.0%
AAAATAAGTATAAGTCCCTC+CGG + Chr2:79149681-79149700 None:intergenic 30.0%
AACCACTGAAGAAAAGAATA+TGG - Chr2:79147488-79147507 MsG0280011074.01.T01:intron 30.0%
AATAAAACGTATTACAGCCA+AGG + Chr2:79148122-79148141 None:intergenic 30.0%
AGAAAATTGACAATACCTTC+TGG + Chr2:79147763-79147782 None:intergenic 30.0%
ATTAATGCATCATGTGTGTT+TGG - Chr2:79149723-79149742 MsG0280011074.01.T01:CDS 30.0%
CACATAATTACCAAAGACAT+CGG + Chr2:79147553-79147572 None:intergenic 30.0%
GATACAGGTAAAGATGTATT+CGG - Chr2:79148064-79148083 MsG0280011074.01.T01:intron 30.0%
GTGAAGCAAATCAATAAAAC+GGG + Chr2:79148487-79148506 None:intergenic 30.0%
TCACAATACAATGTTCCATT+GGG - Chr2:79147005-79147024 MsG0280011074.01.T01:intron 30.0%
TGAAGCAAATCAATAAAACG+GGG + Chr2:79148486-79148505 None:intergenic 30.0%
TGACACACAACAAAAAGTTA+TGG - Chr2:79148178-79148197 MsG0280011074.01.T01:intron 30.0%
TGCTAATTATGTTGTACAGA+AGG - Chr2:79149530-79149549 MsG0280011074.01.T01:CDS 30.0%
TTATTATGGAATCCTGCATA+TGG - Chr2:79147059-79147078 MsG0280011074.01.T01:intron 30.0%
! AACCATATTCTTTTCTTCAG+TGG + Chr2:79147493-79147512 None:intergenic 30.0%
! CAAGCTTTTGTTGAATAAAC+CGG + Chr2:79147461-79147480 None:intergenic 30.0%
! CACAAAGCATTATGATTGTT+AGG + Chr2:79148339-79148358 None:intergenic 30.0%
! CACTTTTAAATCAACAAGTC+TGG + Chr2:79148312-79148331 None:intergenic 30.0%
! CATTGAAAAAGTACACCTAT+GGG - Chr2:79149619-79149638 MsG0280011074.01.T01:CDS 30.0%
!! ATAACTTTTTGTTGTGTGTC+AGG + Chr2:79148179-79148198 None:intergenic 30.0%
!! ATTTTCAAGAGAGATTTCAC+AGG + Chr2:79149295-79149314 None:intergenic 30.0%
!! CAGACTTGTTGATTTAAAAG+TGG - Chr2:79148310-79148329 MsG0280011074.01.T01:CDS 30.0%
!! CTTGAACCATTTTAATCTTC+TGG + Chr2:79147884-79147903 None:intergenic 30.0%
!! TAACTTTTTGTTGTGTGTCA+GGG + Chr2:79148178-79148197 None:intergenic 30.0%
!! TTTGAGCTTTCTGAAATTTC+TGG - Chr2:79147304-79147323 MsG0280011074.01.T01:CDS 30.0%
!! TTTTCAAGAGAGATTTCACA+GGG + Chr2:79149294-79149313 None:intergenic 30.0%
!!! TTTTTAGCTAGCTTTAAGTG+TGG - Chr2:79149238-79149257 MsG0280011074.01.T01:CDS 30.0%
AAAACTCAATAGAGCATGCA+TGG + Chr2:79149773-79149792 None:intergenic 35.0%
AAAATGGTTCAAGAGCTTGA+TGG - Chr2:79147891-79147910 MsG0280011074.01.T01:intron 35.0%
AAAGAATTAGTTCACGCTGT+TGG + Chr2:79149575-79149594 None:intergenic 35.0%
AAAGGAAAAGAAACCTGAAG+AGG + Chr2:79149060-79149079 None:intergenic 35.0%
AAATGAGATGCTTGGAACTA+CGG - Chr2:79149023-79149042 MsG0280011074.01.T01:CDS 35.0%
AAGGACAAAAGGACAAAGTA+TGG + Chr2:79148785-79148804 None:intergenic 35.0%
AAGTAATTCCTGTCTACAGA+TGG + Chr2:79146915-79146934 None:intergenic 35.0%
ACAAAAGGACAAAGTATGGA+TGG + Chr2:79148781-79148800 None:intergenic 35.0%
ACAATCATCAAGGAATTAGC+AGG - Chr2:79148907-79148926 MsG0280011074.01.T01:intron 35.0%
ACATTGTATTGTGACTTCTG+AGG + Chr2:79146999-79147018 None:intergenic 35.0%
AGAATGGGAAATCAAATTGC+AGG - Chr2:79146795-79146814 MsG0280011074.01.T01:intron 35.0%
AGATACATCGGATCAACATA+AGG + Chr2:79146837-79146856 None:intergenic 35.0%
AGTAATTCCTGTCTACAGAT+GGG + Chr2:79146914-79146933 None:intergenic 35.0%
ATCATGTTCCTCTTATATGC+AGG - Chr2:79149488-79149507 MsG0280011074.01.T01:CDS 35.0%
ATCTGTAGACAGGAATTACT+TGG - Chr2:79146914-79146933 MsG0280011074.01.T01:intron 35.0%
CAATACACTTCTGAATGACA+TGG + Chr2:79147953-79147972 None:intergenic 35.0%
CAGAAGCAAAATGCATATTC+AGG + Chr2:79147172-79147191 None:intergenic 35.0%
CTAGAAGTTTGGATCACAAA+CGG + Chr2:79148750-79148769 None:intergenic 35.0%
CTCAGGCCATAGTTATTAAA+TGG + Chr2:79146579-79146598 None:intergenic 35.0%
CTCATGTACTGAAGATACAT+CGG + Chr2:79146849-79146868 None:intergenic 35.0%
CTTCAACTAAGCAAAGCTAA+AGG + Chr2:79149101-79149120 None:intergenic 35.0%
GCATCTCATTTACAAGCAAT+AGG + Chr2:79149014-79149033 None:intergenic 35.0%
GGATTCCATAATAACCATGA+TGG + Chr2:79147053-79147072 None:intergenic 35.0%
GTCACAATACAATGTTCCAT+TGG - Chr2:79147004-79147023 MsG0280011074.01.T01:intron 35.0%
TAATCCAAGAGGCGAATATT+TGG - Chr2:79149158-79149177 MsG0280011074.01.T01:CDS 35.0%
TCAATAACTTCAGCATCGTT+CGG + Chr2:79149411-79149430 None:intergenic 35.0%
TCCAACCATCATGGTTATTA+TGG - Chr2:79147045-79147064 MsG0280011074.01.T01:intron 35.0%
TCCATAATAACCATGATGGT+TGG + Chr2:79147049-79147068 None:intergenic 35.0%
TCTGGACCAGAAGATTAAAA+TGG - Chr2:79147875-79147894 MsG0280011074.01.T01:intron 35.0%
TCTGTAGACAGGAATTACTT+GGG - Chr2:79146915-79146934 MsG0280011074.01.T01:intron 35.0%
TGACACGATAAAAGGACAAA+AGG + Chr2:79148796-79148815 None:intergenic 35.0%
TGGTAATTATGTGGTTCAGA+AGG - Chr2:79147560-79147579 MsG0280011074.01.T01:intron 35.0%
TTGCTTGTAAATGAGATGCT+TGG - Chr2:79149015-79149034 MsG0280011074.01.T01:CDS 35.0%
TTTAATAACTATGGCCTGAG+TGG - Chr2:79146579-79146598 MsG0280011074.01.T01:CDS 35.0%
TTTGAGTGACAATTTGCATC+TGG - Chr2:79147633-79147652 MsG0280011074.01.T01:intron 35.0%
! AAATTTTGCTTCGTCTCTGT+TGG - Chr2:79147252-79147271 MsG0280011074.01.T01:intron 35.0%
! ACACTTAGCCTTCAAATGTA+TGG - Chr2:79147725-79147744 MsG0280011074.01.T01:intron 35.0%
! AGCACATGCTGTTATTTACA+AGG + Chr2:79148859-79148878 None:intergenic 35.0%
! ATGCTGTTATTTACAAGGAG+TGG + Chr2:79148854-79148873 None:intergenic 35.0%
! CGATGTCTTTGGTAATTATG+TGG - Chr2:79147551-79147570 MsG0280011074.01.T01:intron 35.0%
! CGATTGAGCATAAAGCATTA+AGG + Chr2:79148719-79148738 None:intergenic 35.0%
! CTGAATATGCATTTTGCTTC+TGG - Chr2:79147170-79147189 MsG0280011074.01.T01:intron 35.0%
! GCATTGAAAAAGTACACCTA+TGG - Chr2:79149618-79149637 MsG0280011074.01.T01:CDS 35.0%
! GTGATGGTGTACATCAATAA+AGG + Chr2:79148545-79148564 None:intergenic 35.0%
! TGAGCATAAAGCATTAAGGA+TGG + Chr2:79148715-79148734 None:intergenic 35.0%
! TTTTGTGCACTTTAAGTCCT+TGG - Chr2:79148102-79148121 MsG0280011074.01.T01:intron 35.0%
!! TTAGTTGAAGCTTGTTAAGC+TGG - Chr2:79149111-79149130 MsG0280011074.01.T01:CDS 35.0%
!!! ATCTAGCTTTTCTGCACTTT+TGG - Chr2:79148411-79148430 MsG0280011074.01.T01:CDS 35.0%
AACATGGCCATAAAGCTTGT+TGG + Chr2:79147702-79147721 None:intergenic 40.0%
AAGCTGGATGTTGTCCAAAT+AGG - Chr2:79149127-79149146 MsG0280011074.01.T01:CDS 40.0%
AATTAGAACCATCTGAAGGC+TGG + Chr2:79146554-79146573 None:intergenic 40.0%
AATTCTTGAGTCCATTCCAG+GGG + Chr2:79146718-79146737 None:intergenic 40.0%
ACACTATCAACCCATCCATA+TGG - Chr2:79148032-79148051 MsG0280011074.01.T01:intron 40.0%
ACACTTCTCCACAACATTAG+AGG + Chr2:79148965-79148984 None:intergenic 40.0%
ACATCTTTACCTGTATCACC+CGG + Chr2:79148061-79148080 None:intergenic 40.0%
AGAATTCTTGAGTCCATTCC+AGG + Chr2:79146720-79146739 None:intergenic 40.0%
AGCGACAATATGTTTCCCAT+AGG + Chr2:79149637-79149656 None:intergenic 40.0%
AGCTGGATGTTGTCCAAATA+GGG - Chr2:79149128-79149147 MsG0280011074.01.T01:CDS 40.0%
ATAGTTGCCATACTGATCCT+GGG + Chr2:79148234-79148253 None:intergenic 40.0%
ATGATTGTAGAACGCTCATG+AGG + Chr2:79148895-79148914 None:intergenic 40.0%
ATGGACTCAAGAATTCTTGG+AGG - Chr2:79146723-79146742 MsG0280011074.01.T01:CDS 40.0%
ATGGGAAATCAAATTGCAGG+TGG - Chr2:79146798-79146817 MsG0280011074.01.T01:intron 40.0%
CAAACCAAATATTCGCCTCT+TGG + Chr2:79149165-79149184 None:intergenic 40.0%
CAATACAATGTTCCATTGGG+TGG - Chr2:79147008-79147027 MsG0280011074.01.T01:intron 40.0%
CATCATTGCCTGCATATAAG+AGG + Chr2:79149499-79149518 None:intergenic 40.0%
CGATGTATCTTCAGTACATG+AGG - Chr2:79146847-79146866 MsG0280011074.01.T01:intron 40.0%
CTCGACAACCATACATTTGA+AGG + Chr2:79147736-79147755 None:intergenic 40.0%
CTGGTCATGTTGTTGAATTC+AGG - Chr2:79147323-79147342 MsG0280011074.01.T01:CDS 40.0%
GAACATCACCACGCTATAAA+AGG + Chr2:79147353-79147372 None:intergenic 40.0%
GAAGTTTGCCTCTAATGTTG+TGG - Chr2:79148954-79148973 MsG0280011074.01.T01:intron 40.0%
GAATTCTTGAGTCCATTCCA+GGG + Chr2:79146719-79146738 None:intergenic 40.0%
GAGTTAGCCAACAAGCTTTA+TGG - Chr2:79147692-79147711 MsG0280011074.01.T01:intron 40.0%
GCATATTACCAGTTCCAAGT+TGG + Chr2:79146647-79146666 None:intergenic 40.0%
GGATTATTGCAGACCCTATT+TGG + Chr2:79149144-79149163 None:intergenic 40.0%
GGTGAATTAGAACCATCTGA+AGG + Chr2:79146558-79146577 None:intergenic 40.0%
GTGCATGTTCTCAGTAGAAT+GGG - Chr2:79146780-79146799 MsG0280011074.01.T01:CDS 40.0%
GTGGATAAAGAGTTTGCCAT+TGG + Chr2:79147110-79147129 None:intergenic 40.0%
TCTTTATCCACTTCTCCAGT+TGG - Chr2:79147119-79147138 MsG0280011074.01.T01:intron 40.0%
TGAGCGTTCTACAATCATCA+AGG - Chr2:79148897-79148916 MsG0280011074.01.T01:intron 40.0%
TGGAGAAGCAACTAGAAGTT+TGG + Chr2:79148761-79148780 None:intergenic 40.0%
TGTGCATGTTCTCAGTAGAA+TGG - Chr2:79146779-79146798 MsG0280011074.01.T01:CDS 40.0%
TTCAGGTCATTGTGCCTAAT+AGG + Chr2:79147155-79147174 None:intergenic 40.0%
TTTAGGAGCAGTTAGCATGT+TGG - Chr2:79148208-79148227 MsG0280011074.01.T01:intron 40.0%
! AGCAGCAACGTTTTCAAACA+GGG + Chr2:79146673-79146692 None:intergenic 40.0%
! CAGGTATACCTTTTATAGCG+TGG - Chr2:79147342-79147361 MsG0280011074.01.T01:CDS 40.0%
! GAGCTTCAGAAAGCATATCT+TGG - Chr2:79146960-79146979 MsG0280011074.01.T01:intron 40.0%
! GGAATGGACTCAAGAATTCT+TGG - Chr2:79146720-79146739 MsG0280011074.01.T01:CDS 40.0%
! TGTAGAGAAACTTTTGCTGC+CGG - Chr2:79149659-79149678 MsG0280011074.01.T01:CDS 40.0%
! TTAGGCCATAGAAGTTGATC+TGG - Chr2:79147857-79147876 MsG0280011074.01.T01:intron 40.0%
! TTATGTTGTACAGAAGGTGC+TGG - Chr2:79149536-79149555 MsG0280011074.01.T01:CDS 40.0%
!! ACAGAGAGTACTGTATGTGA+TGG + Chr2:79148561-79148580 None:intergenic 40.0%
!! ATTGGCAGTGCTGATCAATA+TGG - Chr2:79147432-79147451 MsG0280011074.01.T01:CDS 40.0%
!! TTGGCAGTGCTGATCAATAT+GGG - Chr2:79147433-79147452 MsG0280011074.01.T01:intron 40.0%
!!! ATCTGGCAGTTTTTTGAGCA+TGG - Chr2:79147650-79147669 MsG0280011074.01.T01:intron 40.0%
!!! TGCATTTTGCTTCTGGAATG+AGG - Chr2:79147177-79147196 MsG0280011074.01.T01:intron 40.0%
AAACCACCTCCACCACTATA+AGG + Chr2:79146519-79146538 None:intergenic 45.0%
AACAGCATGTGCTTGAGCAT+GGG - Chr2:79148866-79148885 MsG0280011074.01.T01:intron 45.0%
AACCACCTCCACCACTATAA+GGG + Chr2:79146518-79146537 None:intergenic 45.0%
AAGTTGTGCAGCAGCATACT+CGG + Chr2:79146877-79146896 None:intergenic 45.0%
AATAACTATGGCCTGAGTGG+TGG - Chr2:79146582-79146601 MsG0280011074.01.T01:CDS 45.0%
ACAAGCAATAGGCGTTCAGA+AGG + Chr2:79149003-79149022 None:intergenic 45.0%
AGGGTCTGCAATAATCCAAG+AGG - Chr2:79149147-79149166 MsG0280011074.01.T01:CDS 45.0%
ATAACTATGGCCTGAGTGGT+GGG - Chr2:79146583-79146602 MsG0280011074.01.T01:CDS 45.0%
ATGGCTAACCAACTTGGAAC+TGG - Chr2:79146636-79146655 MsG0280011074.01.T01:CDS 45.0%
CATAGTTGCCATACTGATCC+TGG + Chr2:79148235-79148254 None:intergenic 45.0%
CATCTACGTTTCCAGCATCT+AGG + Chr2:79147232-79147251 None:intergenic 45.0%
CATTAGAGGCAAACTTCTGC+TGG + Chr2:79148951-79148970 None:intergenic 45.0%
CTGAGAACATGCACATCAGA+TGG + Chr2:79146774-79146793 None:intergenic 45.0%
CTGGAATGAGGAATGTAGCT+GGG - Chr2:79147189-79147208 MsG0280011074.01.T01:intron 45.0%
CTGGTCCAGATCAACTTCTA+TGG + Chr2:79147865-79147884 None:intergenic 45.0%
GAAGGCTAAGTGTCAGAACA+TGG + Chr2:79147718-79147737 None:intergenic 45.0%
GACAAACCAACACCATATGC+AGG + Chr2:79147074-79147093 None:intergenic 45.0%
GACTCAAGAATTCTTGGAGG+TGG - Chr2:79146726-79146745 MsG0280011074.01.T01:CDS 45.0%
GGATGAAAATGAGCCTCTTC+AGG - Chr2:79149044-79149063 MsG0280011074.01.T01:CDS 45.0%
GTCTTATCCAGGAAGTCCAA+TGG - Chr2:79147091-79147110 MsG0280011074.01.T01:intron 45.0%
GTTGGCTAACTCTCTTCTCT+GGG + Chr2:79147684-79147703 None:intergenic 45.0%
TAACAGCATGTGCTTGAGCA+TGG - Chr2:79148865-79148884 MsG0280011074.01.T01:intron 45.0%
TCAACAAGTCTGGCAAGCAA+TGG + Chr2:79148302-79148321 None:intergenic 45.0%
TCCTTCATGGCTAACCAACT+TGG - Chr2:79146630-79146649 MsG0280011074.01.T01:CDS 45.0%
TGCTTAAGTGTCAAAGACCC+TGG - Chr2:79149183-79149202 MsG0280011074.01.T01:CDS 45.0%
TGGAATCCTGCATATGGTGT+TGG - Chr2:79147065-79147084 MsG0280011074.01.T01:intron 45.0%
TGGAATGAGGAATGTAGCTG+GGG - Chr2:79147190-79147209 MsG0280011074.01.T01:intron 45.0%
TTAACGACCCATCTGTAGAC+AGG - Chr2:79146904-79146923 MsG0280011074.01.T01:intron 45.0%
TTGGATCTGGCAGTCCTATT+AGG - Chr2:79147138-79147157 MsG0280011074.01.T01:intron 45.0%
! ATAGCGTGGTGATGTTCTGA+TGG - Chr2:79147356-79147375 MsG0280011074.01.T01:CDS 45.0%
! ATTTGCATGGCAGAGAGTAC+TGG - Chr2:79148139-79148158 MsG0280011074.01.T01:intron 45.0%
! CAGCAGCAACGTTTTCAAAC+AGG + Chr2:79146674-79146693 None:intergenic 45.0%
! CGCTTCTCTTCGTGTTTTTC+TGG - Chr2:79148453-79148472 MsG0280011074.01.T01:intron 45.0%
! GCAGCAACGTTTTCAAACAG+GGG + Chr2:79146672-79146691 None:intergenic 45.0%
! GCTTTGATGACCGATGTCTT+TGG - Chr2:79147540-79147559 MsG0280011074.01.T01:intron 45.0%
! GTCATCAAAGCAAGAGCATG+TGG + Chr2:79147531-79147550 None:intergenic 45.0%
! TCTGGAATGAGGAATGTAGC+TGG - Chr2:79147188-79147207 MsG0280011074.01.T01:intron 45.0%
! TGTTGGCTAACTCTCTTCTC+TGG + Chr2:79147685-79147704 None:intergenic 45.0%
!! GAGAAGTGTTTGACCTTTGG+AGG - Chr2:79148976-79148995 MsG0280011074.01.T01:CDS 45.0%
!! GGTGTTGGTTTGTCTTATCC+AGG - Chr2:79147080-79147099 MsG0280011074.01.T01:intron 45.0%
!! GTGGAGAAGTGTTTGACCTT+TGG - Chr2:79148973-79148992 MsG0280011074.01.T01:CDS 45.0%
!! TCCAAGTTGGTTAGCCATGA+AGG + Chr2:79146634-79146653 None:intergenic 45.0%
AACCCATCCATATGGTTGCC+GGG - Chr2:79148040-79148059 MsG0280011074.01.T01:intron 50.0%
AAGTCCTCGGAATATGCACC+AGG + Chr2:79149204-79149223 None:intergenic 50.0%
ACCACCTCCACCACTATAAG+GGG + Chr2:79146517-79146536 None:intergenic 50.0%
ACCACGGATTTACCACCCAA+TGG + Chr2:79147023-79147042 None:intergenic 50.0%
AGATGGAGAAGCAACTCCAG+AGG + Chr2:79146757-79146776 None:intergenic 50.0%
AGTCCTCGGAATATGCACCA+GGG + Chr2:79149203-79149222 None:intergenic 50.0%
AGTTGTGCAGCAGCATACTC+GGG + Chr2:79146876-79146895 None:intergenic 50.0%
ATAGGACTGCCAGATCCAAC+TGG + Chr2:79147137-79147156 None:intergenic 50.0%
ATATGGTTGCCGGGTGATAC+AGG - Chr2:79148049-79148068 MsG0280011074.01.T01:intron 50.0%
ATGTTGGCCCAGGATCAGTA+TGG - Chr2:79148224-79148243 MsG0280011074.01.T01:intron 50.0%
CAACCCATCCATATGGTTGC+CGG - Chr2:79148039-79148058 MsG0280011074.01.T01:intron 50.0%
CCATGATGGTTGGAACACCA+CGG + Chr2:79147039-79147058 None:intergenic 50.0%
CGCTGTGTACGAGATCAGAA+TGG - Chr2:79147924-79147943 MsG0280011074.01.T01:intron 50.0%
GAGTTTGCCATTGGACTTCC+TGG + Chr2:79147101-79147120 None:intergenic 50.0%
GATGGAGAAGCAACTCCAGA+GGG + Chr2:79146756-79146775 None:intergenic 50.0%
GCACAATACCAGCCTTCAGA+TGG - Chr2:79146543-79146562 MsG0280011074.01.T01:CDS 50.0%
GCATGGAACGCAACTAGCAA+CGG + Chr2:79149756-79149775 None:intergenic 50.0%
GTATGCTGGAAATCCTGCTG+TGG - Chr2:79146605-79146624 MsG0280011074.01.T01:CDS 50.0%
TCCACTTCTCCAGTTGGATC+TGG - Chr2:79147125-79147144 MsG0280011074.01.T01:intron 50.0%
TCCATTGGGTGGTAAATCCG+TGG - Chr2:79147019-79147038 MsG0280011074.01.T01:intron 50.0%
TCTGAAGGCTGGTATTGTGC+AGG + Chr2:79146543-79146562 None:intergenic 50.0%
TGCTGCAGCATCAGCTATGT+GGG - Chr2:79146689-79146708 MsG0280011074.01.T01:CDS 50.0%
TGGTTGTCGAGTCATCCAGA+AGG - Chr2:79147745-79147764 MsG0280011074.01.T01:intron 50.0%
TGTATCACCCGGCAACCATA+TGG + Chr2:79148050-79148069 None:intergenic 50.0%
TTTCCAGCATCTAGGTGCCA+TGG + Chr2:79147224-79147243 None:intergenic 50.0%
! AGAGAAACTTTTGCTGCCGG+AGG - Chr2:79149662-79149681 MsG0280011074.01.T01:CDS 50.0%
! GAGAAACTTTTGCTGCCGGA+GGG - Chr2:79149663-79149682 MsG0280011074.01.T01:CDS 50.0%
! GCAACGTTTTCAAACAGGGG+TGG + Chr2:79146669-79146688 None:intergenic 50.0%
! GTGCTGATCAATATGGGAGC+CGG - Chr2:79147439-79147458 MsG0280011074.01.T01:intron 50.0%
AGACCCTGGTGCATATTCCG+AGG - Chr2:79149197-79149216 MsG0280011074.01.T01:CDS 55.0%
AGCAGTTAGCATGTTGGCCC+AGG - Chr2:79148214-79148233 MsG0280011074.01.T01:intron 55.0%
CACCCGGCAACCATATGGAT+GGG + Chr2:79148045-79148064 None:intergenic 55.0%
CCGTGGTGTTCCAACCATCA+TGG - Chr2:79147036-79147055 MsG0280011074.01.T01:intron 55.0%
CTGCTGCAGCATCAGCTATG+TGG - Chr2:79146688-79146707 MsG0280011074.01.T01:CDS 55.0%
GAGGAATGTAGCTGGGGTCA+TGG - Chr2:79147196-79147215 MsG0280011074.01.T01:intron 55.0%
GCCAGATCCAACTGGAGAAG+TGG + Chr2:79147129-79147148 None:intergenic 55.0%
GCGTTCAGAAGGACCTCCAA+AGG + Chr2:79148992-79149011 None:intergenic 55.0%
TCACCCGGCAACCATATGGA+TGG + Chr2:79148046-79148065 None:intergenic 55.0%
TCCTGCTGTGGCATCCTTCA+TGG - Chr2:79146617-79146636 MsG0280011074.01.T01:CDS 55.0%
TGGAACGCAACTAGCAACGG+CGG + Chr2:79149753-79149772 None:intergenic 55.0%
TTCCAGCATACCCACCACTC+AGG + Chr2:79146596-79146615 None:intergenic 55.0%
! AACACGAAGAGAAGCGCAGC+TGG + Chr2:79148449-79148468 None:intergenic 55.0%
! ACACGAAGAGAAGCGCAGCT+GGG + Chr2:79148448-79148467 None:intergenic 55.0%
! ACTGGCTCCCCTTATAGTGG+TGG - Chr2:79146507-79146526 MsG0280011074.01.T01:CDS 55.0%
! TCCCCTTATAGTGGTGGAGG+TGG - Chr2:79146513-79146532 MsG0280011074.01.T01:CDS 55.0%
!! CACACTGGCTCCCCTTATAG+TGG - Chr2:79146504-79146523 MsG0280011074.01.T01:CDS 55.0%
GCACCATGGCACCTAGATGC+TGG - Chr2:79147218-79147237 MsG0280011074.01.T01:intron 60.0%
GCCATGAAGGATGCCACAGC+AGG + Chr2:79146621-79146640 None:intergenic 60.0%
GGAACGCAACTAGCAACGGC+GGG + Chr2:79149752-79149771 None:intergenic 60.0%
GGCTCCCCTTATAGTGGTGG+AGG - Chr2:79146510-79146529 MsG0280011074.01.T01:CDS 60.0%
TAGCTGGGGTCATGGCACCA+TGG - Chr2:79147204-79147223 MsG0280011074.01.T01:intron 60.0%
TATGTGGGCGTCCCCTGGAA+TGG - Chr2:79146704-79146723 MsG0280011074.01.T01:CDS 60.0%
! CTTGGAGGTGGTTTGCCCTC+TGG - Chr2:79146738-79146757 MsG0280011074.01.T01:CDS 60.0%
TCAGCTATGTGGGCGTCCCC+TGG - Chr2:79146699-79146718 MsG0280011074.01.T01:CDS 65.0%
!! GGCCTGAGTGGTGGGTATGC+TGG - Chr2:79146591-79146610 MsG0280011074.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 79146498 79149824 79146498 ID=MsG0280011074.01;Name=MsG0280011074.01
Chr2 mRNA 79146498 79149824 79146498 ID=MsG0280011074.01.T01;Parent=MsG0280011074.01;Name=MsG0280011074.01.T01;_AED=0.34;_eAED=0.35;_QI=0|0.4|0.5|1|1|1|6|0|602
Chr2 exon 79148959 79149824 79148959 ID=MsG0280011074.01.T01:exon:17482;Parent=MsG0280011074.01.T01
Chr2 exon 79148741 79148882 79148741 ID=MsG0280011074.01.T01:exon:17481;Parent=MsG0280011074.01.T01
Chr2 exon 79148556 79148636 79148556 ID=MsG0280011074.01.T01:exon:17480;Parent=MsG0280011074.01.T01
Chr2 exon 79148252 79148461 79148252 ID=MsG0280011074.01.T01:exon:17479;Parent=MsG0280011074.01.T01
Chr2 exon 79147257 79147451 79147257 ID=MsG0280011074.01.T01:exon:17478;Parent=MsG0280011074.01.T01
Chr2 exon 79146498 79146812 79146498 ID=MsG0280011074.01.T01:exon:17477;Parent=MsG0280011074.01.T01
Chr2 CDS 79148959 79149824 79148959 ID=MsG0280011074.01.T01:cds;Parent=MsG0280011074.01.T01
Chr2 CDS 79148741 79148882 79148741 ID=MsG0280011074.01.T01:cds;Parent=MsG0280011074.01.T01
Chr2 CDS 79148556 79148636 79148556 ID=MsG0280011074.01.T01:cds;Parent=MsG0280011074.01.T01
Chr2 CDS 79148252 79148461 79148252 ID=MsG0280011074.01.T01:cds;Parent=MsG0280011074.01.T01
Chr2 CDS 79147257 79147451 79147257 ID=MsG0280011074.01.T01:cds;Parent=MsG0280011074.01.T01
Chr2 CDS 79146498 79146812 79146498 ID=MsG0280011074.01.T01:cds;Parent=MsG0280011074.01.T01
Gene Sequence

>MsG0280011074.01.T01

ATGGATCACACTGGCTCCCCTTATAGTGGTGGAGGTGGTTTGCCTGCACAATACCAGCCTTCAGATGGTTCTAATTCACCATTTAATAACTATGGCCTGAGTGGTGGGTATGCTGGAAATCCTGCTGTGGCATCCTTCATGGCTAACCAACTTGGAACTGGTAATATGCCACCCCTGTTTGAAAACGTTGCTGCTGCAGCATCAGCTATGTGGGCGTCCCCTGGAATGGACTCAAGAATTCTTGGAGGTGGTTTGCCCTCTGGAGTTGCTTCTCCATCTGATGTGCATGTTCTCAGTAGAATGGGAAATCAAATTGCAGGTGGTGCTCTTCAGTCTCCTTATGTTGATCCGATGTATCTTCAGTACATGAGGACACCCGAGTATGCTGCTGCACAACTTGCTGCTCTTAACGACCCATCTGTAGACAGGAATTACTTGGGCAACTCATATATGAATTTACTTGAGCTTCAGAAAGCATATCTTGGATCTCTGCTTTCACCTCAGAAGTCACAATACAATGTTCCATTGGGTGGTAAATCCGTGGTGTTCCAACCATCATGGTTATTATGGAATCCTGCATATGGTGTTGGTTTGTCTTATCCAGGAAGTCCAATGGCAAACTCTTTATCCACTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGACCTGAATATGCATTTTGCTTCTGGAATGAGGAATGTAGCTGGGGTCATGGCACCATGGCACCTAGATGCTGGAAACGTAGATGAAATTTTGCTTCGTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACAAAGTGCTTTGAGCTTTCTGAAATTTCTGGTCATGTTGTTGAATTCAGGTATACCTTTTATAGCGTGTGCTGATCAATATGGGAGCCGGTTTATTCAACAAAAGCTTGAAACAGCAACCACTGAAGAAAAGAATATGGTTTATCAGGAAATCACGCCACATGCTCTTGCTTTGATGACCGATGTCTTTGGTAATTATGTGGTTCAGAAGAGAAGAGAGTTAGCCAACAAGCTTTATGGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGTCGAGTCATCCAGAAGGCCATAGAAGTTGATCTGGACCAGAAGATTAAAATGGTTCAAGAGCTTGATGGTAATATCATGCGCTGTGTACGAGATCAGAATGGCAACCATGTCATTCAGAAGTGTATTGAATGCGTACCTGAAGATGCAATTGATTTTATTGTCTCAACTTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGTTGCCGGGTGATACAGCATGTGCTTGAGCATGGGAAACCTCATGAGCGTTCTACAATCATCAAGGAATTAGCAGGCAATATAGTTCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTGGAGAAGTGTTTGACCTTTGGAGGTCCTTCTGAACGCCTATTGCTTGTAAATGAGATGCTTGGAACTACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAGTTTGCTAATTATGTTGTACAGAAGGTGCTGGAGACTTGTGATGACCAACAGCGTGAACTAATTCTTTCTCGAATTAAAGTTCATTTGAATGCATTGAAAAAGTACACCTATGGGAAACATATTGTCGCTCGTGTAGAGAAACTTTTGCTGCCGGAGGGACTTATACTTATTTTGTATTATCACTTTTTTTTATATATTAATGCATCATGTGTGTTTGGATACCCGCCGTTGCTAGTTGCGTTCCATGCATGCTCTATTGAGTTTTCATATGCTAATGTATTACATGTCAACGTGTAA
Protein sequence

>MsG0280011074.01.T01

MDHTGSPYSGGGGLPAQYQPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAAASAMWASPGMDSRILGGGLPSGVASPSDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSLLSPQKSQYNVPLGGKSVVFQPSWLLWNPAYGVGLSYPGSPMANSLSTSPVGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAGNVDEILLRLCWKSLKAIKQSALSFLKFLVMLLNSGIPFIACADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKRRELANKLYGHVLTLSLQMYGCRVIQKAIEVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLLLPEGLILILYYHFFLYINASCVFGYPPLLVAFHACSIEFSYANVLHVNV*