AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031813.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031813.01.T01 MTR_6g033325 72.495 549 39 7 1 450 1 536 0.0 652
MsG0680031813.01.T01 MTR_5g092580 47.746 488 144 16 2 401 1 465 3.21e-105 326
MsG0680031813.01.T01 MTR_6g033320 97.826 46 1 0 456 501 197 242 1.69e-23 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031813.01.T01 AT3G54890 44.444 108 54 2 397 499 99 205 2.74e-21 92.4
MsG0680031813.01.T01 AT3G54890 88.636 44 5 0 456 499 196 239 1.03e-20 91.7
MsG0680031813.01.T01 AT3G20490 30.208 288 106 12 243 450 168 440 5.52e-20 92.8
MsG0680031813.01.T01 AT3G20490 36.400 250 102 16 2 211 1 233 6.51e-17 83.6

Find 41 sgRNAs with CRISPR-Local

Find 593 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAATAATTGAATGAATT+TGG 0.150202 6:+27183440 None:intergenic
GGAGGATCGGGTCGGGTATC+AGG 0.187571 6:+27183308 None:intergenic
GCGAACGGAGGAGGAGGAAG+GGG 0.353596 6:+27183244 None:intergenic
TCCCAAGATTTACCTGTTCA+AGG 0.355221 6:-27183143 MsG0680031813.01.T01:intron
AGAGTAGTCGGATCTTGATT+TGG 0.391182 6:+27183356 None:intergenic
AACCTTGAACAGGTAAATCT+TGG 0.403025 6:+27183141 None:intergenic
CGGAGGAGGAGGAAGGGGAA+GGG 0.429046 6:+27183249 None:intergenic
CGGCGAACGGAGGAGGAGGA+AGG 0.433997 6:+27183242 None:intergenic
ACGGAGGAGGAGGAAGGGGA+AGG 0.435551 6:+27183248 None:intergenic
ATCAGGGTCGGAATCAGAAT+CGG 0.435977 6:+27183325 None:intergenic
GGCGAACGGAGGAGGAGGAA+GGG 0.436925 6:+27183243 None:intergenic
AGTTCGGCGGCGAACGGAGG+AGG 0.481232 6:+27183235 None:intergenic
ATACGACGAGGAGGAGGATC+GGG 0.487972 6:+27183296 None:intergenic
GAAATTGAGGAACCTTGAAC+AGG 0.489031 6:+27183131 None:intergenic
AAGGCGGTGGTGGTTCAGTT+CGG 0.496129 6:+27183219 None:intergenic
GAGGATCGGGTCGGGTATCA+GGG 0.505481 6:+27183309 None:intergenic
ACGAGGAGGAGGATCGGGTC+GGG 0.506635 6:+27183301 None:intergenic
TCGGCGGCGAACGGAGGAGG+AGG 0.515481 6:+27183238 None:intergenic
ACCTTGAACAGGTAAATCTT+GGG 0.515548 6:+27183142 None:intergenic
TGGTTCAGTTCGGCGGCGAA+CGG 0.515673 6:+27183229 None:intergenic
TTGAGAATACGACGAGGAGG+AGG 0.528489 6:+27183290 None:intergenic
AATACGACGAGGAGGAGGAT+CGG 0.536553 6:+27183295 None:intergenic
TTCAGTTCGGCGGCGAACGG+AGG 0.536985 6:+27183232 None:intergenic
GAAGCTCCATCATTCTCTCT+AGG 0.543293 6:-27183398 MsG0680031813.01.T01:exon
AAGGGGAAGGGAGACCGCGA+CGG 0.545325 6:+27183261 None:intergenic
TCGAAGCCTAGAGAGAATGA+TGG 0.549489 6:+27183392 None:intergenic
ACAACAAACGAAGGCGGTGG+TGG 0.554767 6:+27183209 None:intergenic
TCAGGGTCGGAATCAGAATC+GGG 0.556982 6:+27183326 None:intergenic
GAATTTGGTGAATGTGAACA+AGG 0.560217 6:+27183455 None:intergenic
ATCGGGTCGGGTATCAGGGT+CGG 0.574352 6:+27183313 None:intergenic
TCGGGTACAATAAGAGTAGT+CGG 0.585354 6:+27183344 None:intergenic
GACGAGGAGGAGGATCGGGT+CGG 0.606187 6:+27183300 None:intergenic
GCGGTGGTGGTTCAGTTCGG+CGG 0.636636 6:+27183222 None:intergenic
AATTTGGTGAATGTGAACAA+GGG 0.646433 6:+27183456 None:intergenic
TCAACAACAAACGAAGGCGG+TGG 0.662336 6:+27183206 None:intergenic
ATTCTCAAACGTCTCCGTCG+CGG 0.668569 6:-27183275 MsG0680031813.01.T01:exon
TTGAACAGGTAAATCTTGGG+AGG 0.671293 6:+27183145 None:intergenic
TCGATGTCAACAACAAACGA+AGG 0.708868 6:+27183200 None:intergenic
ATGTCAACAACAAACGAAGG+CGG 0.716767 6:+27183203 None:intergenic
CGTTTGAGAATACGACGAGG+AGG 0.740194 6:+27183287 None:intergenic
AGACGTTTGAGAATACGACG+AGG 0.801758 6:+27183284 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTAAAAGGATTTAAT+TGG + Chr6:27180332-27180351 None:intergenic 10.0%
!! ATAATATTGATATTGAAATA+TGG - Chr6:27181339-27181358 MsG0680031813.01.T01:intron 10.0%
!! TAATAATAATATATCCTTAT+CGG + Chr6:27174448-27174467 None:intergenic 10.0%
!! TGTTATGATTATTATTATTA+GGG - Chr6:27175575-27175594 MsG0680031813.01.T01:intron 10.0%
!! TTAAATAATACTATAAAACT+CGG + Chr6:27178083-27178102 None:intergenic 10.0%
!! TTGTTATGATTATTATTATT+AGG - Chr6:27175574-27175593 MsG0680031813.01.T01:intron 10.0%
!! TTTGATACATATATAAAATT+TGG - Chr6:27180145-27180164 MsG0680031813.01.T01:intron 10.0%
!! TTTGTAATATCAATATATTT+AGG - Chr6:27175812-27175831 MsG0680031813.01.T01:intron 10.0%
!!! AAAATAAAAATCTAAAACTA+AGG - Chr6:27180002-27180021 MsG0680031813.01.T01:CDS 10.0%
!! AAATGTTCCTTAAAAAAAAT+TGG - Chr6:27180169-27180188 MsG0680031813.01.T01:intron 15.0%
!! AAGGATATATTATTATTAGT+AGG - Chr6:27174450-27174469 MsG0680031813.01.T01:intron 15.0%
!! ACCAAAAAAAGAATAAATAA+TGG + Chr6:27180938-27180957 None:intergenic 15.0%
!! AGAAAATAATTGAATGAATT+TGG + Chr6:27173952-27173971 None:intergenic 15.0%
!! AGGATATATTATTATTAGTA+GGG - Chr6:27174451-27174470 MsG0680031813.01.T01:intron 15.0%
!! ATAAATATGAAAAATACAAG+AGG + Chr6:27179530-27179549 None:intergenic 15.0%
!! ATTGTAAGAATTTACAATAT+TGG + Chr6:27178583-27178602 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - Chr6:27175167-27175186 MsG0680031813.01.T01:intron 15.0%
!! TAAATAATACTATAAAACTC+GGG + Chr6:27178082-27178101 None:intergenic 15.0%
!! TAATTTCGACAAAATTTAAA+TGG + Chr6:27183044-27183063 None:intergenic 15.0%
!! TATTAGTCAATTATTACTTT+AGG - Chr6:27174385-27174404 MsG0680031813.01.T01:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr6:27175166-27175185 MsG0680031813.01.T01:intron 15.0%
!! TTGTGGTATAAAAATTTAAA+AGG + Chr6:27180342-27180361 None:intergenic 15.0%
!! TTTACTTAAAAAAATCAATG+AGG + Chr6:27180417-27180436 None:intergenic 15.0%
!!! AAATAAGTTTAGTTTTCTTT+TGG - Chr6:27181695-27181714 MsG0680031813.01.T01:intron 15.0%
!!! AAATATGTTTTAAGAGTTAA+AGG - Chr6:27181476-27181495 MsG0680031813.01.T01:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - Chr6:27175102-27175121 MsG0680031813.01.T01:intron 15.0%
!!! AATAATCATAACAACTATTT+TGG + Chr6:27175568-27175587 None:intergenic 15.0%
!!! ACATTTCTGAAATTATTATT+TGG - Chr6:27183088-27183107 MsG0680031813.01.T01:intron 15.0%
!!! ACATTTTCCAATTTTTTTTA+AGG + Chr6:27180179-27180198 None:intergenic 15.0%
!!! ACCATTATTTATTCTTTTTT+TGG - Chr6:27180934-27180953 MsG0680031813.01.T01:intron 15.0%
!!! ATTATTTTGATATTGCTTTA+TGG - Chr6:27178769-27178788 MsG0680031813.01.T01:intron 15.0%
!!! ATTTTATTGTCATTTTCAAT+GGG + Chr6:27179987-27180006 None:intergenic 15.0%
!!! GATACTTTTTTTTAGAAAAT+GGG - Chr6:27175236-27175255 MsG0680031813.01.T01:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - Chr6:27175101-27175120 MsG0680031813.01.T01:intron 15.0%
!!! TAAGGAGATTTTTTATTTTT+GGG - Chr6:27180020-27180039 MsG0680031813.01.T01:CDS 15.0%
!!! TATTATGTAAACAATGATTT+TGG - Chr6:27175296-27175315 MsG0680031813.01.T01:intron 15.0%
!!! TATTTTATTGTCATTTTCAA+TGG + Chr6:27179988-27180007 None:intergenic 15.0%
!!! TTTTAAGTAAAATTATGACA+TGG - Chr6:27180426-27180445 MsG0680031813.01.T01:CDS 15.0%
!! AAAATCAAAGAAGTTAAGAA+TGG - Chr6:27182441-27182460 MsG0680031813.01.T01:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr6:27175126-27175145 MsG0680031813.01.T01:intron 20.0%
!! AACATATCTATATCTATCTT+AGG + Chr6:27182499-27182518 None:intergenic 20.0%
!! ACAATAATTCTTTCCATATA+TGG + Chr6:27174650-27174669 None:intergenic 20.0%
!! AGCAAATCAAAAAAATTGAA+TGG - Chr6:27177727-27177746 MsG0680031813.01.T01:intron 20.0%
!! ATTAGTGTAATTATATGTGT+CGG - Chr6:27174879-27174898 MsG0680031813.01.T01:intron 20.0%
!! ATTTGAATGTTGTATAGTAT+AGG - Chr6:27183118-27183137 MsG0680031813.01.T01:intron 20.0%
!! CTACTACTAGAAATTATATT+GGG + Chr6:27177772-27177791 None:intergenic 20.0%
!! CTTGTATATTATATGAAGTA+TGG - Chr6:27181123-27181142 MsG0680031813.01.T01:intron 20.0%
!! GAAAAAAGAAAATATACAAG+TGG - Chr6:27179944-27179963 MsG0680031813.01.T01:CDS 20.0%
!! GACACATTTAAAAAAAGTAA+GGG + Chr6:27179748-27179767 None:intergenic 20.0%
!! GTTGTTCCAATTATTATTAT+TGG - Chr6:27175873-27175892 MsG0680031813.01.T01:intron 20.0%
!! TCAAATTTAATTACAAAGAC+AGG + Chr6:27183447-27183466 None:intergenic 20.0%
!! TCATGACAAAATAATGTATT+TGG + Chr6:27183398-27183417 None:intergenic 20.0%
!! TGAAATAGCCATTAAAAAAA+AGG + Chr6:27179142-27179161 None:intergenic 20.0%
!! TGACACATTTAAAAAAAGTA+AGG + Chr6:27179749-27179768 None:intergenic 20.0%
!! TGTCAAAAAGTAATTTAATG+TGG + Chr6:27178954-27178973 None:intergenic 20.0%
!! TTTACATAATGAAAAACTTG+TGG + Chr6:27180359-27180378 None:intergenic 20.0%
!! TTTAGTATGTTAATTCACAA+CGG - Chr6:27179770-27179789 MsG0680031813.01.T01:intron 20.0%
!! TTTCATCGTAAAAATTTGAT+GGG + Chr6:27180302-27180321 None:intergenic 20.0%
!!! ACATTAAATTACTTTTTGAC+AGG - Chr6:27178953-27178972 MsG0680031813.01.T01:intron 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - Chr6:27175103-27175122 MsG0680031813.01.T01:intron 20.0%
!!! ATATAACAAAGATTGATTTG+AGG + Chr6:27183352-27183371 None:intergenic 20.0%
!!! ATGTTATTTGAACATCAATA+TGG + Chr6:27183072-27183091 None:intergenic 20.0%
!!! CAATTATTTTCTTTGTATGA+TGG - Chr6:27173960-27173979 MsG0680031813.01.T01:exon 20.0%
!!! CTAAGGAGATTTTTTATTTT+TGG - Chr6:27180019-27180038 MsG0680031813.01.T01:CDS 20.0%
!!! GGATACTTTTTTTTAGAAAA+TGG - Chr6:27175235-27175254 MsG0680031813.01.T01:intron 20.0%
!!! TAACCAAATAAAGCTTTATA+TGG + Chr6:27181203-27181222 None:intergenic 20.0%
!!! TAGTGTATGAATATTTTTTG+TGG - Chr6:27181533-27181552 MsG0680031813.01.T01:intron 20.0%
!!! TAGTTTTCAATATCGATATT+AGG - Chr6:27181858-27181877 MsG0680031813.01.T01:intron 20.0%
!!! TATAACAAAGATTGATTTGA+GGG + Chr6:27183351-27183370 None:intergenic 20.0%
!!! TGTGATTTTCTCAAATTATT+TGG + Chr6:27174857-27174876 None:intergenic 20.0%
!!! TTAGCAATTTTGATATATTC+AGG - Chr6:27175509-27175528 MsG0680031813.01.T01:intron 20.0%
!!! TTTTCATCGTAAAAATTTGA+TGG + Chr6:27180303-27180322 None:intergenic 20.0%
!!! TTTTTAATTGATCCAAGAAA+TGG - Chr6:27178506-27178525 MsG0680031813.01.T01:intron 20.0%
! AAATAATAATGATGTGAAGG+AGG + Chr6:27177482-27177501 None:intergenic 25.0%
! AAGAAAGAATGAAGAAATTG+AGG + Chr6:27174274-27174293 None:intergenic 25.0%
! AATATCAGTGTTTAATCTCT+TGG - Chr6:27178391-27178410 MsG0680031813.01.T01:intron 25.0%
! AATCTTTATCTTCACATTGT+AGG - Chr6:27178668-27178687 MsG0680031813.01.T01:intron 25.0%
! AATGACAGTATAATAGTTTG+AGG + Chr6:27178327-27178346 None:intergenic 25.0%
! AATGCCACATATGTTTATTT+CGG + Chr6:27176232-27176251 None:intergenic 25.0%
! AATGTTGTATAGTATAGGAT+AGG - Chr6:27183123-27183142 MsG0680031813.01.T01:intron 25.0%
! ACATCATTATTATTTCCATG+AGG - Chr6:27177487-27177506 MsG0680031813.01.T01:intron 25.0%
! ACATGAATCATGATTTATCA+AGG - Chr6:27182663-27182682 MsG0680031813.01.T01:intron 25.0%
! ATATAAATATACACATACCC+TGG + Chr6:27180903-27180922 None:intergenic 25.0%
! ATGACAGTATAATAGTTTGA+GGG + Chr6:27178326-27178345 None:intergenic 25.0%
! ATTATTGTTGAAGATGTTAG+AGG - Chr6:27177167-27177186 MsG0680031813.01.T01:intron 25.0%
! ATTTGAATACCTGAAAATCA+TGG - Chr6:27182704-27182723 MsG0680031813.01.T01:intron 25.0%
! CAAAATTTAAATGGTTAACG+CGG + Chr6:27183035-27183054 None:intergenic 25.0%
! CTGCATCCAATAATAATAAT+TGG + Chr6:27175882-27175901 None:intergenic 25.0%
! CTTTGTTGAATGTTTGTATT+AGG - Chr6:27183177-27183196 MsG0680031813.01.T01:exon 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr6:27175125-27175144 MsG0680031813.01.T01:intron 25.0%
! GACATGTAAGAATATTTAAG+AGG + Chr6:27181063-27181082 None:intergenic 25.0%
! GACATTAGTAAAAGATAATG+TGG - Chr6:27179814-27179833 MsG0680031813.01.T01:CDS 25.0%
! GATATTGGAAAATCCAAAAT+TGG + Chr6:27180582-27180601 None:intergenic 25.0%
! GCTACTACTAGAAATTATAT+TGG + Chr6:27177773-27177792 None:intergenic 25.0%
! GGTTAATGAAATGTTAGATT+TGG + Chr6:27182794-27182813 None:intergenic 25.0%
! TAAGTCATACTTACATATGA+TGG - Chr6:27179226-27179245 MsG0680031813.01.T01:intron 25.0%
! TACAACAAAATTTCCTCAAA+AGG + Chr6:27178153-27178172 None:intergenic 25.0%
! TAGCAACTTCAAGAATAATA+TGG + Chr6:27178355-27178374 None:intergenic 25.0%
! TCAAAAGATAAAAATGACGA+CGG + Chr6:27177627-27177646 None:intergenic 25.0%
! TGACAAAATAATGTATTTGG+TGG + Chr6:27183395-27183414 None:intergenic 25.0%
! TGATTCATGTTCAAATTTCA+TGG + Chr6:27182653-27182672 None:intergenic 25.0%
! TGGAAATAATAATGATGTGA+AGG + Chr6:27177485-27177504 None:intergenic 25.0%
! TGTGATTGTTTGATCAAAAT+CGG - Chr6:27181272-27181291 MsG0680031813.01.T01:intron 25.0%
! TTCTTCGAAACAAGATAAAA+AGG - Chr6:27177244-27177263 MsG0680031813.01.T01:intron 25.0%
! TTGAAATATGGATACATTGA+AGG + Chr6:27174525-27174544 None:intergenic 25.0%
! TTTCAATATCGATATTAGGT+AGG - Chr6:27181862-27181881 MsG0680031813.01.T01:intron 25.0%
! TTTCCTCAAAAGGAAAATAA+TGG + Chr6:27178143-27178162 None:intergenic 25.0%
! TTTGTAGATGAGATATCATA+TGG - Chr6:27178794-27178813 MsG0680031813.01.T01:intron 25.0%
!! AAACTATCAACTTCACATTT+TGG + Chr6:27178489-27178508 None:intergenic 25.0%
!! AGTTGAAAATCTTGATTTTG+AGG + Chr6:27180781-27180800 None:intergenic 25.0%
!! ATTAGGGTAAACAACTATTT+TGG - Chr6:27175591-27175610 MsG0680031813.01.T01:intron 25.0%
!! TCAATTTTCTAATGTTAGCA+TGG - Chr6:27176006-27176025 MsG0680031813.01.T01:intron 25.0%
!! TGAAGAATTTTTCCATTTCT+AGG - Chr6:27177024-27177043 MsG0680031813.01.T01:intron 25.0%
!! TGTATTCATGGAACTTTTTA+GGG + Chr6:27182422-27182441 None:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - Chr6:27175213-27175232 MsG0680031813.01.T01:intron 25.0%
!! TTGTATTCATGGAACTTTTT+AGG + Chr6:27182423-27182442 None:intergenic 25.0%
!! TTTAAGTGTTTTATAGATGC+AGG - Chr6:27178098-27178117 MsG0680031813.01.T01:intron 25.0%
!! TTTTATTCATGAGCAGAAAA+AGG + Chr6:27175956-27175975 None:intergenic 25.0%
!!! AAAAAATTGAATGGTTCTGA+AGG - Chr6:27177736-27177755 MsG0680031813.01.T01:intron 25.0%
!!! AATCTATGTTTTGATTTCAG+GGG - Chr6:27177670-27177689 MsG0680031813.01.T01:intron 25.0%
!!! ATAATGGACTAAAATTACAC+AGG + Chr6:27177544-27177563 None:intergenic 25.0%
!!! CATCCATATAAAGCTTTATT+TGG - Chr6:27181197-27181216 MsG0680031813.01.T01:intron 25.0%
!!! CTTAGAAGTTGTTTTCTTTT+CGG + Chr6:27178870-27178889 None:intergenic 25.0%
!!! CTTCTTTGATTTTGTATTCA+TGG + Chr6:27182434-27182453 None:intergenic 25.0%
!!! GAATCTATGTTTTGATTTCA+GGG - Chr6:27177669-27177688 MsG0680031813.01.T01:intron 25.0%
!!! TCATCTTGCCTTTTTTTTAA+TGG - Chr6:27179131-27179150 MsG0680031813.01.T01:intron 25.0%
!!! TCTTGAACCTTTTGTTATTT+CGG - Chr6:27178618-27178637 MsG0680031813.01.T01:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - Chr6:27175214-27175233 MsG0680031813.01.T01:intron 25.0%
!!! TGAATCTATGTTTTGATTTC+AGG - Chr6:27177668-27177687 MsG0680031813.01.T01:intron 25.0%
!!! TTGGTAGAATCATTTTTTGT+GGG + Chr6:27180388-27180407 None:intergenic 25.0%
!!! TTTATTTTTGGGTAGATCTA+GGG - Chr6:27180031-27180050 MsG0680031813.01.T01:CDS 25.0%
!!! TTTTATTTTTGGGTAGATCT+AGG - Chr6:27180030-27180049 MsG0680031813.01.T01:CDS 25.0%
AAAATCAATGAGGTAGTTCT+TGG + Chr6:27180407-27180426 None:intergenic 30.0%
AAACATATGTGGCATTGTTT+GGG - Chr6:27176236-27176255 MsG0680031813.01.T01:intron 30.0%
AAAGTAAGTTGTTTATCCCT+TGG - Chr6:27176434-27176453 MsG0680031813.01.T01:intron 30.0%
AAATGGAAAAATTCTTCACC+GGG + Chr6:27177022-27177041 None:intergenic 30.0%
AAGGAATTCAATGACCAAAA+TGG + Chr6:27182301-27182320 None:intergenic 30.0%
AAGGTTCAAGAGAAATCATA+TGG + Chr6:27178609-27178628 None:intergenic 30.0%
AAGTAACTAACAAAAGACAC+CGG - Chr6:27175446-27175465 MsG0680031813.01.T01:intron 30.0%
AAGTTTCCATCTTTCTAATG+TGG - Chr6:27178190-27178209 MsG0680031813.01.T01:intron 30.0%
AATATCTAGACCGTTTGAAA+CGG - Chr6:27181942-27181961 MsG0680031813.01.T01:intron 30.0%
AATTCAATGACCAAAATGGT+GGG + Chr6:27182297-27182316 None:intergenic 30.0%
ACACATGACTGTCAAAAATA+TGG + Chr6:27179642-27179661 None:intergenic 30.0%
ACATAAGTGTGAGAGAATAT+AGG + Chr6:27180616-27180635 None:intergenic 30.0%
ACATCTCATTAGTATGTTAG+CGG + Chr6:27180088-27180107 None:intergenic 30.0%
ACATTAGAAAGATGGAAACT+TGG + Chr6:27178191-27178210 None:intergenic 30.0%
ACCTTGATATATGGAGAAAA+TGG + Chr6:27179616-27179635 None:intergenic 30.0%
AGAAAATATACAAGTGGTGA+AGG - Chr6:27179950-27179969 MsG0680031813.01.T01:CDS 30.0%
AGGTTTATGTTGACAAAAGT+GGG - Chr6:27178688-27178707 MsG0680031813.01.T01:intron 30.0%
AGTATTTATGTCAGTGGATA+TGG + Chr6:27176056-27176075 None:intergenic 30.0%
ATAATACTATAAAACTCGGG+TGG + Chr6:27178079-27178098 None:intergenic 30.0%
ATATTTATTGCGGTGGAATA+AGG + Chr6:27183326-27183345 None:intergenic 30.0%
ATATTTCCCATGTTTGTTTG+TGG + Chr6:27180460-27180479 None:intergenic 30.0%
ATCCAAAATTGGATTTCCAT+TGG + Chr6:27180571-27180590 None:intergenic 30.0%
ATGCAAAAATAAACACATCC+AGG + Chr6:27178451-27178470 None:intergenic 30.0%
ATTAGAAAGATGGAAACTTG+GGG + Chr6:27178189-27178208 None:intergenic 30.0%
CAAATGGTCTAGATTTCAAA+CGG + Chr6:27182005-27182024 None:intergenic 30.0%
CAATGTGAAGATAAAGATTC+AGG + Chr6:27178667-27178686 None:intergenic 30.0%
CATTAGAAAGATGGAAACTT+GGG + Chr6:27178190-27178209 None:intergenic 30.0%
CATTGCTAGAAGAAGATAAA+GGG + Chr6:27178549-27178568 None:intergenic 30.0%
CCAAAAGGATGAACAAATAT+GGG - Chr6:27177439-27177458 MsG0680031813.01.T01:intron 30.0%
CCTTGATATATGGAGAAAAT+GGG + Chr6:27179615-27179634 None:intergenic 30.0%
CTAATGTCATATACACTTGA+CGG + Chr6:27179802-27179821 None:intergenic 30.0%
GAAAAAAAGAAAGCAGGATT+TGG - Chr6:27176725-27176744 MsG0680031813.01.T01:intron 30.0%
GAAATGCTTACAGACTTTAT+CGG - Chr6:27178727-27178746 MsG0680031813.01.T01:intron 30.0%
GAAATGGAAAAATTCTTCAC+CGG + Chr6:27177023-27177042 None:intergenic 30.0%
GATAAAGTCTGTAAGCATTT+CGG + Chr6:27178728-27178747 None:intergenic 30.0%
GGCATAAACGATAATCATAT+AGG + Chr6:27176405-27176424 None:intergenic 30.0%
GTGAATGTATCATTGAAGAA+AGG + Chr6:27179391-27179410 None:intergenic 30.0%
GTTAAGAAAATAGAAGTCGT+CGG - Chr6:27181219-27181238 MsG0680031813.01.T01:intron 30.0%
TAAACATATGTGGCATTGTT+TGG - Chr6:27176235-27176254 MsG0680031813.01.T01:intron 30.0%
TAAACCTAGGTAGGTTTAAA+CGG + Chr6:27182050-27182069 None:intergenic 30.0%
TAATCTCTTGGTAGAAATCA+AGG - Chr6:27178403-27178422 MsG0680031813.01.T01:intron 30.0%
TAGAAATCAAGGATATAGAG+CGG - Chr6:27178414-27178433 MsG0680031813.01.T01:intron 30.0%
TAGGTTTATGTTGACAAAAG+TGG - Chr6:27178687-27178706 MsG0680031813.01.T01:intron 30.0%
TAGTGAGAAAAAAAGAAAGC+AGG - Chr6:27176719-27176738 MsG0680031813.01.T01:intron 30.0%
TCATTGCTAGAAGAAGATAA+AGG + Chr6:27178550-27178569 None:intergenic 30.0%
TCCAAAATTGGATTTCCATT+GGG + Chr6:27180570-27180589 None:intergenic 30.0%
TCGATATTAGGTAGGTTTAA+TGG - Chr6:27181870-27181889 MsG0680031813.01.T01:intron 30.0%
TGAAAACTACTATGAAGTAC+TGG + Chr6:27181847-27181866 None:intergenic 30.0%
TGCATTACAACTTCTAGTAT+AGG + Chr6:27179859-27179878 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - Chr6:27175110-27175129 MsG0680031813.01.T01:intron 30.0%
TGTATCAGCAAGTAATTTAC+AGG + Chr6:27178981-27179000 None:intergenic 30.0%
TTAGGTAGGTTTAATGGAAT+CGG - Chr6:27181876-27181895 MsG0680031813.01.T01:intron 30.0%
TTTGAGGGAGATATTTATTG+CGG + Chr6:27183336-27183355 None:intergenic 30.0%
TTTGCCGAAATAAACATATG+TGG - Chr6:27176225-27176244 MsG0680031813.01.T01:intron 30.0%
! AATAATTGGAACAACCGTTT+TGG + Chr6:27175868-27175887 None:intergenic 30.0%
! ATGCCATTATTTTCCTTTTG+AGG - Chr6:27178137-27178156 MsG0680031813.01.T01:intron 30.0%
! ATGGCAATTGATGTTCATTT+TGG + Chr6:27178237-27178256 None:intergenic 30.0%
! ATTGAAGTACTACACATTCA+GGG - Chr6:27175017-27175036 MsG0680031813.01.T01:intron 30.0%
! ATTTTCTCCATATATCAAGG+TGG - Chr6:27179615-27179634 MsG0680031813.01.T01:intron 30.0%
! GTCTTATTCTTCCAAATTAG+AGG - Chr6:27179886-27179905 MsG0680031813.01.T01:CDS 30.0%
! GTGTCTTTTGTTAGTTACTT+TGG + Chr6:27175446-27175465 None:intergenic 30.0%
! TCTCAAATTATTTGGAGTGT+CGG + Chr6:27174849-27174868 None:intergenic 30.0%
! TCTTGTTTCGAAGAATTCAA+AGG + Chr6:27177239-27177258 None:intergenic 30.0%
! TGATGATGATGATGATGAAA+TGG - Chr6:27176848-27176867 MsG0680031813.01.T01:intron 30.0%
! TGTTTTCTTTTCGGATTTCT+TGG + Chr6:27178861-27178880 None:intergenic 30.0%
! TTCAGATGTTTCTGCAAATT+GGG - Chr6:27177855-27177874 MsG0680031813.01.T01:intron 30.0%
! TTTTCTTGAGACATCTGTTA+AGG - Chr6:27180206-27180225 MsG0680031813.01.T01:intron 30.0%
! TTTTTGTGTTACAGTGACTT+TGG - Chr6:27181556-27181575 MsG0680031813.01.T01:intron 30.0%
!! GTCTCATTGTGATTTGATTT+TGG + Chr6:27177395-27177414 None:intergenic 30.0%
!! TCTTGTTCTAAAGAAGTCAA+AGG + Chr6:27176939-27176958 None:intergenic 30.0%
!!! ATTGTCATTTTCAATGGGTA+TGG + Chr6:27179982-27180001 None:intergenic 30.0%
!!! CAAGAAGTGTCTACTATTTT+TGG + Chr6:27180677-27180696 None:intergenic 30.0%
!!! CACGGTACTATTTTGAAATA+TGG + Chr6:27174537-27174556 None:intergenic 30.0%
!!! CTTGGTAGAATCATTTTTTG+TGG + Chr6:27180389-27180408 None:intergenic 30.0%
!!! GCTAGCTTTTGAGTTATTAT+TGG + Chr6:27180540-27180559 None:intergenic 30.0%
AACCTTGAACAGGTAAATCT+TGG + Chr6:27174251-27174270 None:intergenic 35.0%
AATGACAGTCTTACACATTC+AGG - Chr6:27175840-27175859 MsG0680031813.01.T01:intron 35.0%
AATGGAAAAAGTCTTCACTG+GGG + Chr6:27177309-27177328 None:intergenic 35.0%
AATGGAAAAATTCTTCACCG+GGG + Chr6:27177021-27177040 None:intergenic 35.0%
AATGTTAGCATGGATCTGTT+TGG - Chr6:27176016-27176035 MsG0680031813.01.T01:intron 35.0%
AATTCCAGATTCTGTTGGAT+TGG - Chr6:27176749-27176768 MsG0680031813.01.T01:intron 35.0%
AATTTAATGTGGACCTTAGC+AGG + Chr6:27178943-27178962 None:intergenic 35.0%
ACAAAGCAATTCTAGACCAA+GGG + Chr6:27176453-27176472 None:intergenic 35.0%
ACAACTTACTTTGCAGCTTA+AGG + Chr6:27176426-27176445 None:intergenic 35.0%
ACCGTTAAATCAAAACCGTT+CGG + Chr6:27181745-27181764 None:intergenic 35.0%
ACCTTAACTATGCATCTTGA+TGG + Chr6:27178256-27178275 None:intergenic 35.0%
ACCTTGAACAGGTAAATCTT+GGG + Chr6:27174250-27174269 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - Chr6:27175249-27175268 MsG0680031813.01.T01:intron 35.0%
AGAATTCCTTTGATGCTTAC+AGG - Chr6:27178820-27178839 MsG0680031813.01.T01:intron 35.0%
AGAGAGTTGAATTGTTGTAG+TGG - Chr6:27180987-27181006 MsG0680031813.01.T01:intron 35.0%
AGCTTGAGAATTCCTAGAAA+TGG + Chr6:27177039-27177058 None:intergenic 35.0%
AGTTAGTCATTTCAATCCTC+CGG + Chr6:27175468-27175487 None:intergenic 35.0%
ATATGGACCACCTTGATATA+TGG + Chr6:27179625-27179644 None:intergenic 35.0%
ATCAATTGAAACTTGCGAAG+AGG + Chr6:27176819-27176838 None:intergenic 35.0%
ATCACAATGAGACATATCAC+AGG - Chr6:27177402-27177421 MsG0680031813.01.T01:intron 35.0%
ATCCAGACACACCTAAATTT+AGG + Chr6:27181154-27181173 None:intergenic 35.0%
ATCTCATTAGTATGTTAGCG+GGG + Chr6:27180086-27180105 None:intergenic 35.0%
ATTTAATGTGGACCTTAGCA+GGG + Chr6:27178942-27178961 None:intergenic 35.0%
ATTTACTCTTGTTGCTATGC+TGG - Chr6:27177996-27178015 MsG0680031813.01.T01:intron 35.0%
CAAAACGTGTTTGCTTACTA+AGG - Chr6:27179084-27179103 MsG0680031813.01.T01:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG + Chr6:27175066-27175085 None:intergenic 35.0%
CAATAGGCCGAAATAACAAA+AGG + Chr6:27178628-27178647 None:intergenic 35.0%
CACGTTGATATTTGTTCATC+TGG + Chr6:27180515-27180534 None:intergenic 35.0%
CAGAATGAGTTTCCATTTCT+TGG + Chr6:27178521-27178540 None:intergenic 35.0%
CAGATGAACAAATATCAACG+TGG - Chr6:27180513-27180532 MsG0680031813.01.T01:intron 35.0%
CAGCAACGTTAAAACTCTTA+GGG - Chr6:27182921-27182940 MsG0680031813.01.T01:intron 35.0%
CATCTCATTAGTATGTTAGC+GGG + Chr6:27180087-27180106 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG + Chr6:27175067-27175086 None:intergenic 35.0%
CGAAACAAGATAAAAAGGTG+CGG - Chr6:27177249-27177268 MsG0680031813.01.T01:intron 35.0%
CTAGATCAAACGGTCTAAAT+CGG - Chr6:27181966-27181985 MsG0680031813.01.T01:intron 35.0%
GAATGGAAAAAGTCTTCACT+GGG + Chr6:27177310-27177329 None:intergenic 35.0%
GAATTCAATGACCAAAATGG+TGG + Chr6:27182298-27182317 None:intergenic 35.0%
GATTTGAGCTTATTCCGATA+AGG - Chr6:27174431-27174450 MsG0680031813.01.T01:intron 35.0%
GCATAATCTATAAGCTATCG+TGG + Chr6:27176326-27176345 None:intergenic 35.0%
GCCAAAAGGATGAACAAATA+TGG - Chr6:27177438-27177457 MsG0680031813.01.T01:intron 35.0%
GCTCAACAAAAGCAATAGAA+AGG + Chr6:27182320-27182339 None:intergenic 35.0%
GTATGGACACTCCTAAATTT+AGG - Chr6:27181140-27181159 MsG0680031813.01.T01:intron 35.0%
GTGACAAGTATTTATGTCAG+TGG + Chr6:27176062-27176081 None:intergenic 35.0%
GTTGACTAAAGAGACATGTT+GGG - Chr6:27175784-27175803 MsG0680031813.01.T01:intron 35.0%
TAAACCTACCTAGGTTTATG+TGG - Chr6:27182052-27182071 MsG0680031813.01.T01:intron 35.0%
TACAAAGCAATTCTAGACCA+AGG + Chr6:27176454-27176473 None:intergenic 35.0%
TACACATTCAGGAACCAAAA+CGG - Chr6:27175851-27175870 MsG0680031813.01.T01:intron 35.0%
TCACAATGAGACATATCACA+GGG - Chr6:27177403-27177422 MsG0680031813.01.T01:intron 35.0%
TCATATTGCCACATAAACCT+AGG + Chr6:27182063-27182082 None:intergenic 35.0%
TCATGAATCAGATCTCTCTA+TGG - Chr6:27183412-27183431 MsG0680031813.01.T01:exon 35.0%
TCCATAAATCCTCCTGATTT+CGG + Chr6:27176989-27177008 None:intergenic 35.0%
TCTAATCGAATAGATGTGTC+AGG - Chr6:27174729-27174748 MsG0680031813.01.T01:intron 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + Chr6:27175080-27175099 None:intergenic 35.0%
TGACACATCTATTCGATTAG+AGG + Chr6:27174730-27174749 None:intergenic 35.0%
TTATATTATGCATGCAGCCA+GGG - Chr6:27182157-27182176 MsG0680031813.01.T01:intron 35.0%
TTATGTTGACAAAAGTGGGA+AGG - Chr6:27178692-27178711 MsG0680031813.01.T01:intron 35.0%
TTCAGTTCACTTACCAAACA+AGG + Chr6:27179294-27179313 None:intergenic 35.0%
TTCATCACACACATCATTGA+AGG + Chr6:27177342-27177361 None:intergenic 35.0%
TTCTGATCAATGGGTACAAT+AGG + Chr6:27178644-27178663 None:intergenic 35.0%
TTGAAACGGTCTAGATCAAA+CGG - Chr6:27181956-27181975 MsG0680031813.01.T01:intron 35.0%
TTGAATCTCTCAAGATTCTC+AGG + Chr6:27181610-27181629 None:intergenic 35.0%
TTGATCTAGACCGTTTCAAA+CGG + Chr6:27181955-27181974 None:intergenic 35.0%
TTGGAAATTCCAGATTCTGT+TGG - Chr6:27176744-27176763 MsG0680031813.01.T01:intron 35.0%
TTTATGGAAAGATCTATCCC+CGG - Chr6:27177001-27177020 MsG0680031813.01.T01:intron 35.0%
TTTGAGGAAGAAAGAAGTGA+TGG + Chr6:27180765-27180784 None:intergenic 35.0%
! AAGAAGTCAAAGGTGTGTTT+CGG + Chr6:27176929-27176948 None:intergenic 35.0%
! AAGATTCAGGTTCTGATCAA+TGG + Chr6:27178654-27178673 None:intergenic 35.0%
! ACCCAATGGAAATCCAATTT+TGG - Chr6:27180566-27180585 MsG0680031813.01.T01:CDS 35.0%
! AGATTCAGGTTCTGATCAAT+GGG + Chr6:27178653-27178672 None:intergenic 35.0%
! ATCTATTCGATTAGAGGTGT+TGG + Chr6:27174724-27174743 None:intergenic 35.0%
! CATTGAAGTACTACACATTC+AGG - Chr6:27175016-27175035 MsG0680031813.01.T01:intron 35.0%
! CCCATATTTGTTCATCCTTT+TGG + Chr6:27177442-27177461 None:intergenic 35.0%
! CCCATTTTCTCCATATATCA+AGG - Chr6:27179612-27179631 MsG0680031813.01.T01:intron 35.0%
! CTGTCATTTCAGTCCATATA+TGG - Chr6:27174634-27174653 MsG0680031813.01.T01:intron 35.0%
! CTTCAGATGTTTCTGCAAAT+TGG - Chr6:27177854-27177873 MsG0680031813.01.T01:intron 35.0%
! GACGAGTTTTCGTTGAATAT+CGG - Chr6:27182081-27182100 MsG0680031813.01.T01:intron 35.0%
! GATGATGATGAAATGGTTGT+TGG - Chr6:27176855-27176874 MsG0680031813.01.T01:intron 35.0%
! TTCATCTGGTTTCAATGTTG+AGG + Chr6:27180501-27180520 None:intergenic 35.0%
!! AGAGAATATAGGAGAGTGTT+AGG + Chr6:27180605-27180624 None:intergenic 35.0%
!! AGCTCAAAAGTGTCATTGAA+AGG - Chr6:27176660-27176679 MsG0680031813.01.T01:intron 35.0%
!! CAGGGTATTTCTTCTTTTCA+GGG + Chr6:27182365-27182384 None:intergenic 35.0%
!! GAGAATATAGGAGAGTGTTA+GGG + Chr6:27180604-27180623 None:intergenic 35.0%
!! GGGAAAGATGTTTCTGATTT+TGG + Chr6:27177289-27177308 None:intergenic 35.0%
!! GTTGTCGAATTTTAGTGTCA+CGG + Chr6:27182536-27182555 None:intergenic 35.0%
!!! AAATGGTTAACGCGGTTTTT+TGG + Chr6:27183027-27183046 None:intergenic 35.0%
!!! ACCGAACGGTTTTGATTTAA+CGG - Chr6:27181741-27181760 MsG0680031813.01.T01:intron 35.0%
!!! GCGGTTTTTTGGTGTAAATT+GGG + Chr6:27183016-27183035 None:intergenic 35.0%
!!! GTAGAATCATTTTTTGTGGG+AGG + Chr6:27180385-27180404 None:intergenic 35.0%
AACCAAAAGATGCAGGTCAA+AGG - Chr6:27177881-27177900 MsG0680031813.01.T01:intron 40.0%
AAGCTAGCATTATCACCCAA+TGG - Chr6:27180552-27180571 MsG0680031813.01.T01:CDS 40.0%
AATAAATACTACCTCCGTCC+CGG - Chr6:27175045-27175064 MsG0680031813.01.T01:intron 40.0%
AATTCTCGCATTCATGAGGT+CGG - Chr6:27181243-27181262 MsG0680031813.01.T01:intron 40.0%
ACAAGAACTTCTGAGTCAAC+AGG + Chr6:27179260-27179279 None:intergenic 40.0%
ACCGAAATCAGGAGGATTTA+TGG - Chr6:27176985-27177004 MsG0680031813.01.T01:intron 40.0%
ACCTCAACCACAAACAAACA+TGG - Chr6:27180450-27180469 MsG0680031813.01.T01:intron 40.0%
ACTAACTAAAGAGACGTGTG+GGG - Chr6:27175481-27175500 MsG0680031813.01.T01:intron 40.0%
ACTACCAAAATAGACGCTTG+AGG + Chr6:27175682-27175701 None:intergenic 40.0%
ACTTAAGCTCCCCAAATATG+AGG + Chr6:27181448-27181467 None:intergenic 40.0%
AGAGTAGTCGGATCTTGATT+TGG + Chr6:27174036-27174055 None:intergenic 40.0%
AGGAATTCTCAAGCTTCTGT+TGG - Chr6:27177044-27177063 MsG0680031813.01.T01:intron 40.0%
AGGTAGGTTTAAACGGTCAA+TGG + Chr6:27182043-27182062 None:intergenic 40.0%
AGTCACCTCTCCTCATATTT+GGG - Chr6:27181435-27181454 MsG0680031813.01.T01:intron 40.0%
ATGTCAACAACAAACGAAGG+CGG + Chr6:27174189-27174208 None:intergenic 40.0%
ATTAGGACGTCTTGCTTTGT+TGG - Chr6:27183194-27183213 MsG0680031813.01.T01:exon 40.0%
ATTGCCACATAAACCTAGGT+AGG + Chr6:27182059-27182078 None:intergenic 40.0%
ATTTCAAACGGTCCATCAGA+TGG + Chr6:27181993-27182012 None:intergenic 40.0%
ATTTCCCAATCCCAAGTTAG+CGG - Chr6:27177094-27177113 MsG0680031813.01.T01:intron 40.0%
CAAGAGCCACATTAGAAAGA+TGG + Chr6:27178199-27178218 None:intergenic 40.0%
CACGAACTTACAATGTTGTC+TGG - Chr6:27179568-27179587 MsG0680031813.01.T01:intron 40.0%
CAGACAACATTGTAAGTTCG+TGG + Chr6:27179570-27179589 None:intergenic 40.0%
CATTGGTATACAGGATCAGA+TGG - Chr6:27177934-27177953 MsG0680031813.01.T01:intron 40.0%
CCGGTATAATTGACCTACTT+TGG - Chr6:27175064-27175083 MsG0680031813.01.T01:intron 40.0%
CCTCAACCACAAACAAACAT+GGG - Chr6:27180451-27180470 MsG0680031813.01.T01:intron 40.0%
CCTGAAAAGAAGAAATACCC+TGG - Chr6:27182363-27182382 MsG0680031813.01.T01:intron 40.0%
CGGTGCAAAGCTATTATACA+CGG - Chr6:27182101-27182120 MsG0680031813.01.T01:intron 40.0%
CTAGAGCTGATAGATGAATG+AGG + Chr6:27176702-27176721 None:intergenic 40.0%
CTCATGAGTCAGAGTAGAAA+AGG + Chr6:27176533-27176552 None:intergenic 40.0%
CTCCTAAATTTAGGTGTGTC+TGG - Chr6:27181149-27181168 MsG0680031813.01.T01:intron 40.0%
CTGGGTTTGAATCTAGACTT+GGG - Chr6:27182894-27182913 MsG0680031813.01.T01:intron 40.0%
GAAAAGAAGAAATACCCTGG+TGG - Chr6:27182366-27182385 MsG0680031813.01.T01:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - Chr6:27175250-27175269 MsG0680031813.01.T01:intron 40.0%
GAAATTGAGGAACCTTGAAC+AGG + Chr6:27174261-27174280 None:intergenic 40.0%
GACAGACTCAATGACTGAAA+TGG - Chr6:27175762-27175781 MsG0680031813.01.T01:intron 40.0%
GACTAACTAAAGAGACGTGT+GGG - Chr6:27175480-27175499 MsG0680031813.01.T01:intron 40.0%
GATACTTACAACAGCAAGCA+TGG + Chr6:27181662-27181681 None:intergenic 40.0%
GATGATGAAATGGTTGTTGG+TGG - Chr6:27176858-27176877 MsG0680031813.01.T01:intron 40.0%
GATTCACCATGACTTCTGAT+TGG - Chr6:27180835-27180854 MsG0680031813.01.T01:intron 40.0%
GCAGCAACGTTAAAACTCTT+AGG - Chr6:27182920-27182939 MsG0680031813.01.T01:intron 40.0%
GCATTACCGTCTATGAAGTA+CGG - Chr6:27174806-27174825 MsG0680031813.01.T01:intron 40.0%
GCCATCAAGATGCATAGTTA+AGG - Chr6:27178252-27178271 MsG0680031813.01.T01:intron 40.0%
GCTGAATTCTTGAATCCTCA+TGG + Chr6:27177505-27177524 None:intergenic 40.0%
GGAATGGAAAAAGTCTTCAC+TGG + Chr6:27177311-27177330 None:intergenic 40.0%
GGAATTCTCAAGCTTCTGTT+GGG - Chr6:27177045-27177064 MsG0680031813.01.T01:intron 40.0%
GGATGAACAAATATGGGAAG+CGG - Chr6:27177445-27177464 MsG0680031813.01.T01:intron 40.0%
GGATTCAAGAATTCAGCAGT+TGG - Chr6:27177508-27177527 MsG0680031813.01.T01:intron 40.0%
GGTTGACTAAAGAGACATGT+TGG - Chr6:27175783-27175802 MsG0680031813.01.T01:intron 40.0%
GTTAACGCAGTTTACACGTA+TGG + Chr6:27182815-27182834 None:intergenic 40.0%
GTTATATTATGCATGCAGCC+AGG - Chr6:27182156-27182175 MsG0680031813.01.T01:intron 40.0%
GTTCAACAAACAGCATATCC+AGG - Chr6:27183234-27183253 MsG0680031813.01.T01:exon 40.0%
GTTTACCTGTTGACAAAGCA+GGG + Chr6:27177208-27177227 None:intergenic 40.0%
GTTTCCAATCCAACAGAATC+TGG + Chr6:27176756-27176775 None:intergenic 40.0%
TAACTAACAAAAGACACCGG+AGG - Chr6:27175449-27175468 MsG0680031813.01.T01:intron 40.0%
TAATGATGTGAAGGAGGAAG+AGG + Chr6:27177476-27177495 None:intergenic 40.0%
TACAGGATCAGATGGAAGAA+AGG - Chr6:27177942-27177961 MsG0680031813.01.T01:intron 40.0%
TAGCATGGATCTGTTTGGAT+TGG - Chr6:27176021-27176040 MsG0680031813.01.T01:intron 40.0%
TAGTCACCTCTCCTCATATT+TGG - Chr6:27181434-27181453 MsG0680031813.01.T01:intron 40.0%
TCCATTATGTGTCAACGCAT+TGG - Chr6:27177556-27177575 MsG0680031813.01.T01:intron 40.0%
TCCCAAGATTTACCTGTTCA+AGG - Chr6:27174246-27174265 MsG0680031813.01.T01:intron 40.0%
TCGATCCAACAGACATTGAT+GGG + Chr6:27181902-27181921 None:intergenic 40.0%
TCGATGTCAACAACAAACGA+AGG + Chr6:27174192-27174211 None:intergenic 40.0%
TCGGGTACAATAAGAGTAGT+CGG + Chr6:27174048-27174067 None:intergenic 40.0%
TCTGTTGGATCGAGATCAAA+CGG - Chr6:27181909-27181928 MsG0680031813.01.T01:intron 40.0%
TGAACTCATTCACTGCAGAT+GGG - Chr6:27181636-27181655 MsG0680031813.01.T01:intron 40.0%
TGACTAACTAAAGAGACGTG+TGG - Chr6:27175479-27175498 MsG0680031813.01.T01:intron 40.0%
TGACTCAGAAGTTCTTGTAG+TGG - Chr6:27179262-27179281 MsG0680031813.01.T01:intron 40.0%
TGAGTAGCCAAATTCTCCAA+AGG + Chr6:27183267-27183286 None:intergenic 40.0%
TGCATCGTCAACCTCTAATT+TGG + Chr6:27179900-27179919 None:intergenic 40.0%
TGCTTACAGACTTTATCGGA+AGG - Chr6:27178731-27178750 MsG0680031813.01.T01:intron 40.0%
TGTTGAGGTGGAATGAATTG+TGG + Chr6:27180486-27180505 None:intergenic 40.0%
TGTTGTGTGACAGACAAGAA+TGG - Chr6:27180701-27180720 MsG0680031813.01.T01:CDS 40.0%
TGTTTGACTAACGAAGTGCA+CGG + Chr6:27174555-27174574 None:intergenic 40.0%
TTAGTATCTGCACATTCCTC+TGG - Chr6:27176615-27176634 MsG0680031813.01.T01:intron 40.0%
TTGAACAGGTAAATCTTGGG+AGG + Chr6:27174247-27174266 None:intergenic 40.0%
TTGACCGTTTAAACCTACCT+AGG - Chr6:27182043-27182062 MsG0680031813.01.T01:intron 40.0%
TTGATCCAACAGCCTTTGAT+GGG - Chr6:27181373-27181392 MsG0680031813.01.T01:intron 40.0%
TTTAAACGGTCAATGGCTGT+TGG + Chr6:27182036-27182055 None:intergenic 40.0%
TTTCAAACGGTCCATCAGAT+GGG + Chr6:27181992-27182011 None:intergenic 40.0%
! AAAGTGTCATTGAAAGGTGC+TGG - Chr6:27176666-27176685 MsG0680031813.01.T01:intron 40.0%
! AACTGGACCTTTGGAGAATT+TGG - Chr6:27183257-27183276 MsG0680031813.01.T01:exon 40.0%
! ACAAATCCATCGAGCATTGT+GGG + Chr6:27182969-27182988 None:intergenic 40.0%
! ACATCCTCAAGCGTCTATTT+TGG - Chr6:27175675-27175694 MsG0680031813.01.T01:intron 40.0%
! ATCTGGTTTCAATGTTGAGG+TGG + Chr6:27180498-27180517 None:intergenic 40.0%
! ATTCTGTTGGATTGGAAACC+GGG - Chr6:27176757-27176776 MsG0680031813.01.T01:intron 40.0%
! ATTTTCCGCATTCATGCAGT+CGG + Chr6:27181399-27181418 None:intergenic 40.0%
! CAAGGATATAGAGCGGTTTT+TGG - Chr6:27178421-27178440 MsG0680031813.01.T01:intron 40.0%
! CGCGATTAACCATGATTTTC+AGG + Chr6:27182716-27182735 None:intergenic 40.0%
! GATTCTGTTGGATTGGAAAC+CGG - Chr6:27176756-27176775 MsG0680031813.01.T01:intron 40.0%
! GGTTGATTCTGAAAGCCAAA+AGG - Chr6:27177424-27177443 MsG0680031813.01.T01:intron 40.0%
! TCCAATGCGTTGACACATAA+TGG + Chr6:27177560-27177579 None:intergenic 40.0%
! TTTTGGTCTCTGAATGTGTG+AGG - Chr6:27175608-27175627 MsG0680031813.01.T01:intron 40.0%
!! AATGACCAAAATGGTGGGTA+GGG + Chr6:27182292-27182311 None:intergenic 40.0%
!! ATTTTGGTACCTGAGGCATT+GGG - Chr6:27182180-27182199 MsG0680031813.01.T01:intron 40.0%
!! CACGTCGTTTTGTAGAAAAG+AGG - Chr6:27179043-27179062 MsG0680031813.01.T01:intron 40.0%
!! CCAGGGTATTTCTTCTTTTC+AGG + Chr6:27182366-27182385 None:intergenic 40.0%
!! CTAGAAGAAGCATTTGTGCA+AGG + Chr6:27180816-27180835 None:intergenic 40.0%
!! GTAGTGGTTCTAACCTTGTT+TGG - Chr6:27179278-27179297 MsG0680031813.01.T01:intron 40.0%
!! TAGGAGAGTGTTAGGGATAT+TGG + Chr6:27180597-27180616 None:intergenic 40.0%
!! TTGACCTGCATCTTTTGGTT+CGG + Chr6:27177881-27177900 None:intergenic 40.0%
!! TTGCTTTTGTTGAGCACCAA+AGG - Chr6:27182325-27182344 MsG0680031813.01.T01:intron 40.0%
!!! CGCGGTTTTTTGGTGTAAAT+TGG + Chr6:27183017-27183036 None:intergenic 40.0%
!!! CTTGCTTTGTTGGCTTTTGT+TGG - Chr6:27183204-27183223 MsG0680031813.01.T01:exon 40.0%
AAGAAGCCGACTGCTAAGAA+GGG - Chr6:27178887-27178906 MsG0680031813.01.T01:intron 45.0%
ACATCATTGAAGGCAGGTGT+AGG + Chr6:27177332-27177351 None:intergenic 45.0%
ACTAGCAGAGTGCACAATCA+GGG - Chr6:27174973-27174992 MsG0680031813.01.T01:intron 45.0%
ACTGCGTTAACTCTTAACCC+AGG - Chr6:27182824-27182843 MsG0680031813.01.T01:intron 45.0%
AGACGTTTGAGAATACGACG+AGG + Chr6:27174108-27174127 None:intergenic 45.0%
AGCAATTGAATCTTGCGCAG+AGG + Chr6:27177125-27177144 None:intergenic 45.0%
AGGCATCCAATCAGAAGTCA+TGG + Chr6:27180844-27180863 None:intergenic 45.0%
AGTAACACGTTTCACACACG+TGG - Chr6:27182566-27182585 MsG0680031813.01.T01:intron 45.0%
ATATCCAGGAACTGGACCTT+TGG - Chr6:27183248-27183267 MsG0680031813.01.T01:exon 45.0%
ATCAGGGTCGGAATCAGAAT+CGG + Chr6:27174067-27174086 None:intergenic 45.0%
ATGACTTCTGATTGGATGCC+TGG - Chr6:27180843-27180862 MsG0680031813.01.T01:intron 45.0%
ATTGAAGGCAGGTGTAGGAA+TGG + Chr6:27177327-27177346 None:intergenic 45.0%
CAAACAGCATATCCAGGAAC+TGG - Chr6:27183240-27183259 MsG0680031813.01.T01:exon 45.0%
CACTCTCCTGTAAGCATCAA+AGG + Chr6:27178829-27178848 None:intergenic 45.0%
CAGTTTCCCTTCTTAGCAGT+CGG + Chr6:27178896-27178915 None:intergenic 45.0%
CCAAGTCTAGATTCAAACCC+AGG + Chr6:27182896-27182915 None:intergenic 45.0%
CCCATGTTTGTTTGTGGTTG+AGG + Chr6:27180454-27180473 None:intergenic 45.0%
CCTGGGTTTGAATCTAGACT+TGG - Chr6:27182893-27182912 MsG0680031813.01.T01:intron 45.0%
CGAGTGACGACGTTATGAAA+TGG + Chr6:27179191-27179210 None:intergenic 45.0%
CGGTAATTCTCGCATTCATG+AGG - Chr6:27181239-27181258 MsG0680031813.01.T01:intron 45.0%
CGTACAAGCAAGCGATCAAT+CGG - Chr6:27177906-27177925 MsG0680031813.01.T01:intron 45.0%
CGTTTACCTGTTGACAAAGC+AGG + Chr6:27177209-27177228 None:intergenic 45.0%
CTAGTAGCTGTGAAACCGAA+CGG - Chr6:27181727-27181746 MsG0680031813.01.T01:intron 45.0%
CTCGATCCAACAGACATTGA+TGG + Chr6:27181903-27181922 None:intergenic 45.0%
CTGAACTCATTCACTGCAGA+TGG - Chr6:27181635-27181654 MsG0680031813.01.T01:intron 45.0%
CTTACAATGTTGTCTGGTGC+TGG - Chr6:27179574-27179593 MsG0680031813.01.T01:intron 45.0%
CTTGATCCAACAGCCTTTGA+TGG - Chr6:27181372-27181391 MsG0680031813.01.T01:intron 45.0%
CTTTGATGCTTACAGGAGAG+TGG - Chr6:27178827-27178846 MsG0680031813.01.T01:intron 45.0%
GAAGCTCCATCATTCTCTCT+AGG - Chr6:27173991-27174010 MsG0680031813.01.T01:exon 45.0%
GAGGGAGATATTTATTGCGG+TGG + Chr6:27183333-27183352 None:intergenic 45.0%
GATCCATGGCACAACAACAT+TGG - Chr6:27183294-27183313 MsG0680031813.01.T01:exon 45.0%
GCAGTGCAATGAGTGGTTAT+TGG - Chr6:27182594-27182613 MsG0680031813.01.T01:intron 45.0%
GCTGTTGGATCAAGATCAGA+TGG + Chr6:27181366-27181385 None:intergenic 45.0%
GCTGTTGGATCGAGATCAAA+TGG + Chr6:27182021-27182040 None:intergenic 45.0%
GGAAACTGGTCAGAGTAGAT+CGG - Chr6:27177070-27177089 MsG0680031813.01.T01:intron 45.0%
GGAGAATTTGGCTACTCACT+TGG - Chr6:27183269-27183288 MsG0680031813.01.T01:exon 45.0%
GGATTTGATCCTCTACGTCT+TGG - Chr6:27181577-27181596 MsG0680031813.01.T01:intron 45.0%
GGTCTTTCTCCATACTCCTT+TGG + Chr6:27182344-27182363 None:intergenic 45.0%
GGTGTGTTTCGGTTACACAT+TGG + Chr6:27176918-27176937 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG + Chr6:27175062-27175081 None:intergenic 45.0%
GTCACCTCTCCTCATATTTG+GGG - Chr6:27181436-27181455 MsG0680031813.01.T01:intron 45.0%
GTCAGGTGTCTGATAAGTGT+CGG - Chr6:27174746-27174765 MsG0680031813.01.T01:intron 45.0%
GTTATGAAATGGCGCAAGCA+TGG + Chr6:27179180-27179199 None:intergenic 45.0%
TAAGAAGCCGACTGCTAAGA+AGG - Chr6:27178886-27178905 MsG0680031813.01.T01:intron 45.0%
TAGATTCAAACCCAGGACCT+TGG + Chr6:27182889-27182908 None:intergenic 45.0%
TATGAAGCACAGACACTCCT+CGG + Chr6:27174946-27174965 None:intergenic 45.0%
TCACACACATCATTGAAGGC+AGG + Chr6:27177338-27177357 None:intergenic 45.0%
TCGAAGCCTAGAGAGAATGA+TGG + Chr6:27174000-27174019 None:intergenic 45.0%
TGAGGTGGAATGAATTGTGG+TGG + Chr6:27180483-27180502 None:intergenic 45.0%
TGTTCGACATGTGTCGAACA+TGG - Chr6:27181173-27181192 MsG0680031813.01.T01:intron 45.0%
TGTTGAGCACCAAAGGAGTA+TGG - Chr6:27182332-27182351 MsG0680031813.01.T01:intron 45.0%
TTCAGGGGACAATTTGACAG+TGG - Chr6:27177685-27177704 MsG0680031813.01.T01:intron 45.0%
TTCTCAAGCTTCTGTTGGGT+TGG - Chr6:27177049-27177068 MsG0680031813.01.T01:intron 45.0%
TTGCCAATGTTGTTGTGCCA+TGG + Chr6:27183300-27183319 None:intergenic 45.0%
! ACTGGGTGAAAGCACAAGAA+TGG - Chr6:27182211-27182230 MsG0680031813.01.T01:intron 45.0%
! CGACGAGAGTAGTTTTCAGA+TGG - Chr6:27179329-27179348 MsG0680031813.01.T01:intron 45.0%
! CTGGGTGAAAGCACAAGAAT+GGG - Chr6:27182212-27182231 MsG0680031813.01.T01:intron 45.0%
! GAAGCATTTGTGCAAGGAAG+TGG + Chr6:27180810-27180829 None:intergenic 45.0%
! GACAAATCCATCGAGCATTG+TGG + Chr6:27182970-27182989 None:intergenic 45.0%
! GGAGAACTTTCCGTCCTTTT+GGG - Chr6:27182942-27182961 MsG0680031813.01.T01:intron 45.0%
! GGTGGTGCTTTTGATCCTTT+GGG - Chr6:27182384-27182403 MsG0680031813.01.T01:intron 45.0%
! TCTAGCTTAACCAAGGTCCT+GGG - Chr6:27182876-27182895 MsG0680031813.01.T01:intron 45.0%
! TTTTGGCAGTTGCGTGTTTC+TGG + Chr6:27177378-27177397 None:intergenic 45.0%
!! AAAGGATCAAAAGCACCACC+AGG + Chr6:27182384-27182403 None:intergenic 45.0%
!! AAGGATCAAAAGCACCACCA+GGG + Chr6:27182383-27182402 None:intergenic 45.0%
!! ATGTGTGAGGCGTTGATTGA+CGG - Chr6:27175621-27175640 MsG0680031813.01.T01:intron 45.0%
!! CAATGACCAAAATGGTGGGT+AGG + Chr6:27182293-27182312 None:intergenic 45.0%
!! GATTTTGGTACCTGAGGCAT+TGG - Chr6:27182179-27182198 MsG0680031813.01.T01:intron 45.0%
!! GGGTCTTTAGAGTATCCCAA+AGG + Chr6:27182402-27182421 None:intergenic 45.0%
!! GGTCTCTTCTAGCTTAACCA+AGG - Chr6:27182869-27182888 MsG0680031813.01.T01:intron 45.0%
!! GTTGGTGGTGAAAGTAAACC+CGG - Chr6:27176873-27176892 MsG0680031813.01.T01:intron 45.0%
!! TAGAGGTGTTGGTGCTACAT+AGG + Chr6:27174713-27174732 None:intergenic 45.0%
!! TGGTGGTGCTTTTGATCCTT+TGG - Chr6:27182383-27182402 MsG0680031813.01.T01:intron 45.0%
!! TTCTAGCTTAACCAAGGTCC+TGG - Chr6:27182875-27182894 MsG0680031813.01.T01:intron 45.0%
!! TTGGTGGTGAAAGTAAACCC+GGG - Chr6:27176874-27176893 MsG0680031813.01.T01:intron 45.0%
!!! TATATTTTTCTTATTATTAT+TGG - Chr6:27174359-27174378 MsG0680031813.01.T01:intron 5.0%
!!! TTTTTTTTTTAGTAATTTTA+TGG - Chr6:27175388-27175407 MsG0680031813.01.T01:intron 5.0%
AAAAGTGGGAAGGAGTCGAC+TGG - Chr6:27178702-27178721 MsG0680031813.01.T01:intron 50.0%
AAGTAATACTCCCTCCGTCC+CGG + Chr6:27175271-27175290 None:intergenic 50.0%
AATACGACGAGGAGGAGGAT+CGG + Chr6:27174097-27174116 None:intergenic 50.0%
ACCTAGGAAACCCTGTTCCA+TGG - Chr6:27182262-27182281 MsG0680031813.01.T01:intron 50.0%
ACTAGCCGCTAACTTGGGAT+TGG + Chr6:27177102-27177121 None:intergenic 50.0%
AGCGCTTAGATGAGATGGCA+CGG - Chr6:27182847-27182866 MsG0680031813.01.T01:intron 50.0%
AGCTCCCCAAATATGAGGAG+AGG + Chr6:27181443-27181462 None:intergenic 50.0%
AGGGGACAATTTGACAGTGG+AGG - Chr6:27177688-27177707 MsG0680031813.01.T01:intron 50.0%
ATCGGCCCATCAATGTCTGT+TGG - Chr6:27181894-27181913 MsG0680031813.01.T01:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - Chr6:27175254-27175273 MsG0680031813.01.T01:intron 50.0%
ATTCTCAAACGTCTCCGTCG+CGG - Chr6:27174114-27174133 MsG0680031813.01.T01:CDS 50.0%
CACAGAACGATTCTGACCAG+AGG + Chr6:27176634-27176653 None:intergenic 50.0%
CATCTCATCTAAGCGCTCCT+GGG + Chr6:27182844-27182863 None:intergenic 50.0%
CATTGTGGGACCCAAAAGGA+CGG + Chr6:27182955-27182974 None:intergenic 50.0%
CCATCAAGGTAAGGTGGTCT+AGG + Chr6:27180873-27180892 None:intergenic 50.0%
CCTAGACCACCTTACCTTGA+TGG - Chr6:27180870-27180889 MsG0680031813.01.T01:intron 50.0%
CCTAGGAAACCCTGTTCCAT+GGG - Chr6:27182263-27182282 MsG0680031813.01.T01:intron 50.0%
CGTTTGAGAATACGACGAGG+AGG + Chr6:27174105-27174124 None:intergenic 50.0%
CTACTCACTTGGCTGATCCA+TGG - Chr6:27183280-27183299 MsG0680031813.01.T01:exon 50.0%
CTAGCCGCTAACTTGGGATT+GGG + Chr6:27177101-27177120 None:intergenic 50.0%
CTAGGAAACCCTGTTCCATG+GGG - Chr6:27182264-27182283 MsG0680031813.01.T01:intron 50.0%
GAACAAATATGGGAAGCGGC+AGG - Chr6:27177449-27177468 MsG0680031813.01.T01:intron 50.0%
GACTAGCAGAGTGCACAATC+AGG - Chr6:27174972-27174991 MsG0680031813.01.T01:intron 50.0%
GCTGAACCATCAAGGTAAGG+TGG + Chr6:27180879-27180898 None:intergenic 50.0%
GGAGCTGAACCATCAAGGTA+AGG + Chr6:27180882-27180901 None:intergenic 50.0%
GGTACTTCACCAAGACGTAG+AGG + Chr6:27181589-27181608 None:intergenic 50.0%
GGTTAACGCAGTGCAATGAG+TGG - Chr6:27182587-27182606 MsG0680031813.01.T01:intron 50.0%
GTCTAAATCGGCCCATCTGA+TGG - Chr6:27181978-27181997 MsG0680031813.01.T01:intron 50.0%
GTTACACATTGGCCGTGTTG+AGG + Chr6:27176907-27176926 None:intergenic 50.0%
TCAACAACAAACGAAGGCGG+TGG + Chr6:27174186-27174205 None:intergenic 50.0%
TCAGGGTCGGAATCAGAATC+GGG + Chr6:27174066-27174085 None:intergenic 50.0%
TGACGTGAACCGAAATCAGG+AGG - Chr6:27176977-27176996 MsG0680031813.01.T01:intron 50.0%
TGCTGACGTGAACCGAAATC+AGG - Chr6:27176974-27176993 MsG0680031813.01.T01:intron 50.0%
TGGAACAGGGTTTCCTAGGT+AGG + Chr6:27182262-27182281 None:intergenic 50.0%
TTCTCCAAAGGTCCAGTTCC+TGG + Chr6:27183255-27183274 None:intergenic 50.0%
TTGAGAATACGACGAGGAGG+AGG + Chr6:27174102-27174121 None:intergenic 50.0%
TTGCCTAATCCCAATGCCTC+AGG + Chr6:27182192-27182211 None:intergenic 50.0%
! ACCTTGATGGTTCAGCTCCA+GGG - Chr6:27180883-27180902 MsG0680031813.01.T01:intron 50.0%
! ATGCATGCAGCCAGGGATTT+TGG - Chr6:27182164-27182183 MsG0680031813.01.T01:intron 50.0%
! CGCCTTTGACCTGCATCTTT+TGG + Chr6:27177886-27177905 None:intergenic 50.0%
! GGCATTGGGATTAGGCAACT+GGG - Chr6:27182194-27182213 MsG0680031813.01.T01:intron 50.0%
! GGGAGAACTTTCCGTCCTTT+TGG - Chr6:27182941-27182960 MsG0680031813.01.T01:intron 50.0%
! TACCTTGATGGTTCAGCTCC+AGG - Chr6:27180882-27180901 MsG0680031813.01.T01:intron 50.0%
! TCGGCTGGTCATTGGTATAC+AGG - Chr6:27177925-27177944 MsG0680031813.01.T01:intron 50.0%
!! AAAGGTGCGGTTTGCTGATG+AGG - Chr6:27177262-27177281 MsG0680031813.01.T01:intron 50.0%
!! AGAGGACTAGCCGCTAACTT+GGG + Chr6:27177107-27177126 None:intergenic 50.0%
!! AGGCATTGGGATTAGGCAAC+TGG - Chr6:27182193-27182212 MsG0680031813.01.T01:intron 50.0%
!! GCTTCTGTTGGGTTGGAAAC+TGG - Chr6:27177056-27177075 MsG0680031813.01.T01:intron 50.0%
!! GTACCTGAGGCATTGGGATT+AGG - Chr6:27182186-27182205 MsG0680031813.01.T01:intron 50.0%
AAACACAGACCCACTTCGCC+CGG + Chr6:27176778-27176797 None:intergenic 55.0%
ACAACAAACGAAGGCGGTGG+TGG + Chr6:27174183-27174202 None:intergenic 55.0%
ACACATTGGCCGTGTTGAGG+AGG + Chr6:27176904-27176923 None:intergenic 55.0%
ACCAGGACACACCTAATCCG+AGG - Chr6:27174926-27174945 MsG0680031813.01.T01:intron 55.0%
ACCCTGGAGCTGAACCATCA+AGG + Chr6:27180887-27180906 None:intergenic 55.0%
AGGTAGGTTGCTTGTCCTCC+TGG + Chr6:27182246-27182265 None:intergenic 55.0%
ATACGACGAGGAGGAGGATC+GGG + Chr6:27174096-27174115 None:intergenic 55.0%
ATGGGCCGACTGCATGAATG+CGG - Chr6:27181391-27181410 MsG0680031813.01.T01:intron 55.0%
ATTGGCCGTGTTGAGGAGGA+GGG + Chr6:27176900-27176919 None:intergenic 55.0%
CAAGAATGGGCAGCACTTCC+AGG - Chr6:27182225-27182244 MsG0680031813.01.T01:intron 55.0%
CAAGCAAGCGATCAATCGGC+TGG - Chr6:27177910-27177929 MsG0680031813.01.T01:intron 55.0%
CAAGGTAAGGTGGTCTAGGC+TGG + Chr6:27180869-27180888 None:intergenic 55.0%
CACAACACGTGTCTGACACC+AGG - Chr6:27174909-27174928 MsG0680031813.01.T01:intron 55.0%
CCATCTCATCTAAGCGCTCC+TGG + Chr6:27182845-27182864 None:intergenic 55.0%
CCCATGGAACAGGGTTTCCT+AGG + Chr6:27182266-27182285 None:intergenic 55.0%
CCGTCTATGAAGTACGGCCA+CGG - Chr6:27174812-27174831 MsG0680031813.01.T01:intron 55.0%
CCGTGGCCGTACTTCATAGA+CGG + Chr6:27174815-27174834 None:intergenic 55.0%
CTTCGCCCTGCTTTGTCAAC+AGG - Chr6:27177200-27177219 MsG0680031813.01.T01:intron 55.0%
GATTGGAAACCGGGCGAAGT+GGG - Chr6:27176766-27176785 MsG0680031813.01.T01:intron 55.0%
GCACAGACACTCCTCGGATT+AGG + Chr6:27174940-27174959 None:intergenic 55.0%
GCCTCAGGTACCAAAATCCC+TGG + Chr6:27182177-27182196 None:intergenic 55.0%
GCGCTTAGATGAGATGGCAC+GGG - Chr6:27182848-27182867 MsG0680031813.01.T01:intron 55.0%
GGAGGACAAGCAACCTACCT+AGG - Chr6:27182246-27182265 MsG0680031813.01.T01:intron 55.0%
GGTCAATTATACCGGGACGG+AGG + Chr6:27175059-27175078 None:intergenic 55.0%
GTAGGGTTCCCCATGGAACA+GGG + Chr6:27182275-27182294 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - Chr6:27175258-27175277 MsG0680031813.01.T01:intron 55.0%
TCATGCAGTCGGCCCATCAA+AGG + Chr6:27181388-27181407 None:intergenic 55.0%
TGGGCCGAACCAAAAGATGC+AGG - Chr6:27177874-27177893 MsG0680031813.01.T01:intron 55.0%
TTGGGTCCCACAATGCTCGA+TGG - Chr6:27182960-27182979 MsG0680031813.01.T01:intron 55.0%
TTTGTCTCCGCAGTTGCGTG+CGG - Chr6:27182984-27183003 MsG0680031813.01.T01:intron 55.0%
! AAGGCGGTGGTGGTTCAGTT+CGG + Chr6:27174173-27174192 None:intergenic 55.0%
! CGAGCATTGTGGGACCCAAA+AGG + Chr6:27182959-27182978 None:intergenic 55.0%
! GCGATCAATCGGCTGGTCAT+TGG - Chr6:27177917-27177936 MsG0680031813.01.T01:intron 55.0%
! GGGAACCCTACCCACCATTT+TGG - Chr6:27182284-27182303 MsG0680031813.01.T01:intron 55.0%
! TCCTCGGATTAGGTGTGTCC+TGG + Chr6:27174930-27174949 None:intergenic 55.0%
!! CAGAGGACTAGCCGCTAACT+TGG + Chr6:27177108-27177127 None:intergenic 55.0%
!! CCAGGAGCGCTTAGATGAGA+TGG - Chr6:27182842-27182861 MsG0680031813.01.T01:intron 55.0%
!! GCCAGGGATTTTGGTACCTG+AGG - Chr6:27182173-27182192 MsG0680031813.01.T01:intron 55.0%
!!! AGAGCGGTTTTTGGTGTGCC+TGG - Chr6:27178430-27178449 MsG0680031813.01.T01:intron 55.0%
ATCGGGTCGGGTATCAGGGT+CGG + Chr6:27174079-27174098 None:intergenic 60.0%
CATTGGCCGTGTTGAGGAGG+AGG + Chr6:27176901-27176920 None:intergenic 60.0%
GAATGGGCAGCACTTCCAGG+AGG - Chr6:27182228-27182247 MsG0680031813.01.T01:intron 60.0%
GAGGATCGGGTCGGGTATCA+GGG + Chr6:27174083-27174102 None:intergenic 60.0%
GGATTGGAAACCGGGCGAAG+TGG - Chr6:27176765-27176784 MsG0680031813.01.T01:intron 60.0%
GGTAGGGTTCCCCATGGAAC+AGG + Chr6:27182276-27182295 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - Chr6:27175257-27175276 MsG0680031813.01.T01:intron 60.0%
GTAACCTCCGCACGCAACTG+CGG + Chr6:27182994-27183013 None:intergenic 60.0%
GTCGGCCCATCAAAGGCTGT+TGG + Chr6:27181381-27181400 None:intergenic 60.0%
TGGTTCAGTTCGGCGGCGAA+CGG + Chr6:27174163-27174182 None:intergenic 60.0%
! TAAGGTGGTCTAGGCTGGCC+AGG + Chr6:27180864-27180883 None:intergenic 60.0%
!! ATGGTGGGTAGGGTTCCCCA+TGG + Chr6:27182282-27182301 None:intergenic 60.0%
AAGGGGAAGGGAGACCGCGA+CGG + Chr6:27174131-27174150 None:intergenic 65.0%
ACGAGGAGGAGGATCGGGTC+GGG + Chr6:27174091-27174110 None:intergenic 65.0%
ACGGAGGAGGAGGAAGGGGA+AGG + Chr6:27174144-27174163 None:intergenic 65.0%
CGGAGGAGGAGGAAGGGGAA+GGG + Chr6:27174143-27174162 None:intergenic 65.0%
GACGAGGAGGAGGATCGGGT+CGG + Chr6:27174092-27174111 None:intergenic 65.0%
GCGAACGGAGGAGGAGGAAG+GGG + Chr6:27174148-27174167 None:intergenic 65.0%
GGAGGATCGGGTCGGGTATC+AGG + Chr6:27174084-27174103 None:intergenic 65.0%
GGCGAACGGAGGAGGAGGAA+GGG + Chr6:27174149-27174168 None:intergenic 65.0%
TGTCGGCGTGTCAGTGTCCG+TGG + Chr6:27174832-27174851 None:intergenic 65.0%
TTCAGTTCGGCGGCGAACGG+AGG + Chr6:27174160-27174179 None:intergenic 65.0%
! GCGGTGGTGGTTCAGTTCGG+CGG + Chr6:27174170-27174189 None:intergenic 65.0%
AGTTCGGCGGCGAACGGAGG+AGG + Chr6:27174157-27174176 None:intergenic 70.0%
CCGGGCCCTCCTCCTCAACA+CGG - Chr6:27176892-27176911 MsG0680031813.01.T01:intron 70.0%
CCGTGTTGAGGAGGAGGGCC+CGG + Chr6:27176895-27176914 None:intergenic 70.0%
CGGCGAACGGAGGAGGAGGA+AGG + Chr6:27174150-27174169 None:intergenic 70.0%
CGTGTTGAGGAGGAGGGCCC+GGG + Chr6:27176894-27176913 None:intergenic 70.0%
GTCTCCGCAGTTGCGTGCGG+AGG - Chr6:27182987-27183006 MsG0680031813.01.T01:intron 70.0%
TCGGCGGCGAACGGAGGAGG+AGG + Chr6:27174154-27174173 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 27173936 27183475 27173936 ID=MsG0680031813.01;
Chr6 mRNA 27173936 27183475 27173936 ID=MsG0680031813.01.T01;Parent=MsG0680031813.01
Chr6 exon 27173936 27174212 27173936 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27174070 27174212 27174070 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 CDS 27174788 27174813 27174788 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27174788 27174813 27174788 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27175309 27175324 27175309 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27175309 27175324 27175309 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27175639 27175677 27175639 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27175639 27175677 27175639 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27176503 27176513 27176503 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27176503 27176513 27176503 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27177620 27177636 27177620 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27177620 27177636 27177620 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27179448 27179497 27179448 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27179448 27179497 27179448 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27179627 27179721 27179627 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27179627 27179721 27179627 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27179808 27180127 27179808 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27179808 27180127 27179808 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27180230 27180459 27180230 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27180230 27180459 27180230 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27180526 27180792 27180526 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27180526 27180792 27180526 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Chr6 CDS 27183144 27183435 27183144 ID=MsG0680031813.01.T01.cds;Parent=MsG0680031813.01.T01
Chr6 exon 27183144 27183475 27183144 ID=MsG0680031813.01.T01.exon;Parent=MsG0680031813.01.T01
Gene Sequence

>MsG0680031813.01.T01

ATGATGGATGATGATGAAGCTCCATCATTCTCTCTAGGCTTCGATCTCGATGATTCACCAAATCAAGATCCGACTACTCTTATTGTACCCGATTCTGATTCCGACCCTGATACCCGACCCGATCCTCCTCCTCGTCGTATTCTCAAACGTCTCCGTCGCGGTCTCCCTTCCCCTTCCTCCTCCTCCGTTCGCCGCCGAACTGAACCACCACCGCCTTCGTTTGTTGTTGACATCGATGTTGATGATTATGATGATATTGAAGAGTTCTCCTCCCAAGATTTACCTGTTCAAGTATCTGCACATTCCTCTGGTCAGAATCGTTCTGTGTGTAGTAGCTCAAAAGTGTCATTGAAAGGTGCTGGAGTTTTAATTCCTCATTCATCTATCAGCTCTAGTGAGAAAAAAAGAAAGCAGGATTTGGAAATTCCAGATTCTGTTGGATTGGAAACCGGGCGAAGTGGGTCTGTGTTTCGCAAGTTTGCAGCTAGTCCTCTTCGCAAGTTTCAATTGATTGATTCTGATGATGATGATGATGATGAAATGGTTGTTGGTGGTGAAAAACAAGATAGCAAGAAACAGTTTGCTGACGTGAACCGAAATCAGGAGGATTTATGGAAAGATCTATCCCCGGTGAAGAATTTTTCCATTTCTAGGAATTCTCAAGCTTCTGTTGGGTTGGAAACTGGTCAGAGTAGATCGGCATTTCCCAATCCCAAGTTAGCGGCTAGTCCTCTGCGCAAGATTCAATTGCTTGATTCTGATTCTGATGATGATATTATTGTTGAAGATGACCAAAATCAGAAACATCTTTCCCCAGTGAAGACTTTTTCCATTCCTACACCTGCCTTCAATGATGTGTGTGATGAATACTTTTGTTCTGCCAGAAACACGCAACTGCCAAAATCAAATCACAATGAGACATATCACAGGGTTGATTCTGAAAGCCAAAAGGATGAACAAATATGGGAAGCGGCAGGTCCTCTTCCTCCTTCACATCATTATTATTTCCATGAGGATTCAAGAATTCAGCAGTTGGTTAGTAGTCGCCTGTGTAATTTTAGTCCATTATGTGTCAACGCATTGGATCAGCAACAAAATATCGATTACATGGGACAATTTGACAGTGGAGGATCAACAAGCAGACGAAGCAAATCAAAAAAATTGAATGGTTCTGAAGGTTCAGTAGATCCCAATATAATTTCTACAAGCGATCAATCGGCTGGTCATTGGTATACAGGATCAGATGGAAGAAAGTATGTTAATTCACAACGCTCCAGGGTATCTGTGAAACCGAACGGTTTTGATTTAACGGTTCAGATTATTTTCGTTGAATATCGTGCAATGAGTGGTTATTGGATAACTCGACGTCTTGCTTTGTTGGCTTTTGTTGGAATCTGTGTTCAACAAACAGCATATCCAGGAACTGGACCTTTGGAGAATTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGCAATGTCCTTATTCCACCGCAATAA

Protein sequence

>MsG0680031813.01.T01

MMDDDEAPSFSLGFDLDDSPNQDPTTLIVPDSDSDPDTRPDPPPRRILKRLRRGLPSPSSSSVRRRTEPPPPSFVVDIDVDDYDDIEEFSSQDLPVQVSAHSSGQNRSVCSSSKVSLKGAGVLIPHSSISSSEKKRKQDLEIPDSVGLETGRSGSVFRKFAASPLRKFQLIDSDDDDDDEMVVGGEKQDSKKQFADVNRNQEDLWKDLSPVKNFSISRNSQASVGLETGQSRSAFPNPKLAASPLRKIQLLDSDSDDDIIVEDDQNQKHLSPVKTFSIPTPAFNDVCDEYFCSARNTQLPKSNHNETYHRVDSESQKDEQIWEAAGPLPPSHHYYFHEDSRIQQLVSSRLCNFSPLCVNALDQQQNIDYMGQFDSGGSTSRRSKSKKLNGSEGSVDPNIISTSDQSAGHWYTGSDGRKYVNSQRSRVSVKPNGFDLTVQIIFVEYRAMSGYWITRRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGNVLIPPQ*