AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021331.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021331.01.T01 MTR_4g071860 96.500 400 12 2 1 398 1 400 0.0 785
MsG0480021331.01.T01 MTR_4g057670 96.250 400 13 2 1 398 1 400 0.0 784
MsG0480021331.01.T01 MTR_4g071880 91.206 398 23 2 1 398 1 386 0.0 724
MsG0480021331.01.T01 MTR_1g109200 83.146 356 59 1 43 398 37 391 0.0 617
MsG0480021331.01.T01 MTR_5g069055 56.534 352 148 4 51 398 8 358 2.52e-134 389
MsG0480021331.01.T01 MTR_5g096670 56.091 353 151 3 49 398 6 357 6.56e-133 385
MsG0480021331.01.T01 MTR_1g061050 54.545 352 155 4 51 398 8 358 2.38e-128 374
MsG0480021331.01.T01 MTR_5g069050 54.857 350 138 5 53 398 51 384 4.49e-124 364
MsG0480021331.01.T01 MTR_7g103920 46.809 94 26 1 155 248 11 80 2.32e-20 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021331.01.T01 AT2G21330 82.836 402 62 5 1 398 1 399 0.0 681
MsG0480021331.01.T01 AT4G38970 83.417 398 62 3 4 398 2 398 0.0 676
MsG0480021331.01.T01 AT2G21330 80.348 402 62 6 1 398 1 389 0.0 652
MsG0480021331.01.T01 AT2G01140 75.949 395 90 2 4 398 2 391 0.0 619
MsG0480021331.01.T01 AT2G21330 82.581 310 47 5 1 306 1 307 0.0 518
MsG0480021331.01.T01 AT4G38970 79.257 323 56 4 4 316 2 323 0.0 514
MsG0480021331.01.T01 AT4G26530 57.062 354 147 4 49 398 6 358 6.42e-137 395
MsG0480021331.01.T01 AT4G26530 57.062 354 147 4 49 398 6 358 6.42e-137 395
MsG0480021331.01.T01 AT4G26530 57.062 354 147 4 49 398 6 358 6.42e-137 395
MsG0480021331.01.T01 AT2G36460 56.534 352 148 4 51 398 8 358 1.48e-134 389
MsG0480021331.01.T01 AT3G52930 55.398 352 152 4 51 398 8 358 5.70e-132 383
MsG0480021331.01.T01 AT5G03690 55.398 352 153 3 51 398 8 359 4.31e-129 375
MsG0480021331.01.T01 AT4G26520 55.398 352 152 4 51 398 8 358 5.93e-127 370
MsG0480021331.01.T01 AT4G26520 55.556 351 151 4 51 397 8 357 1.20e-126 369
MsG0480021331.01.T01 AT4G26520 55.271 351 152 4 52 398 6 355 3.34e-126 368
MsG0480021331.01.T01 AT4G26520 55.271 351 152 4 52 398 6 355 3.34e-126 368
MsG0480021331.01.T01 AT5G03690 55.301 349 152 3 54 398 45 393 3.93e-126 369
MsG0480021331.01.T01 AT2G36460 55.970 268 113 4 135 398 1 267 2.99e-98 294
MsG0480021331.01.T01 AT2G36460 55.970 268 113 4 135 398 1 267 2.99e-98 294
MsG0480021331.01.T01 AT5G03690 54.307 267 118 3 136 398 1 267 1.63e-91 276
MsG0480021331.01.T01 AT5G03690 54.307 267 118 3 136 398 1 267 1.63e-91 276

Find 157 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTTATGTTCTATCATTT+TGG 0.179738 4:-56771955 None:intergenic
TTTGACAAACAATTCCTTCT+TGG 0.220264 4:-56771707 None:intergenic
TTCTGCATTGCTGGTTTAAA+TGG 0.221504 4:-56768902 None:intergenic
TAGGGTTTGGTGCCCCTTGC+TGG 0.266781 4:+56770452 MsG0480021331.01.T01:intron
TTCACCAGGACGTGGTATTT+TGG 0.276147 4:+56770004 MsG0480021331.01.T01:CDS
AATTATAGTTGTTTGTTTGT+TGG 0.300039 4:-56768765 None:intergenic
CCAAGCATGGCGTACTCTTC+TGG 0.301379 4:+56770100 MsG0480021331.01.T01:CDS
TGCTTGGTATTCTGCATTGC+TGG 0.303849 4:-56768911 None:intergenic
GGGAAGCGTTTGGCTTCAAT+TGG 0.313845 4:+56770053 MsG0480021331.01.T01:CDS
TTGAAGTAGCACAAAAGGTT+TGG 0.329064 4:+56771111 MsG0480021331.01.T01:CDS
TTGTCCTTGCACTCAGCTCC+TGG 0.340552 4:-56771209 None:intergenic
CGTGCCATGGGTTTGGAGAT+TGG 0.341879 4:-56771522 None:intergenic
ACCATGATACCAGGGACAGC+TGG 0.345678 4:-56771290 None:intergenic
ATGTCTTCAATGCGGTGTTT+TGG 0.356626 4:-56771570 None:intergenic
AAGATCTCTGGTTCCACAAT+TGG 0.357070 4:-56771056 None:intergenic
ATCGAGCAAAACATTGTTCC+TGG 0.371352 4:+56770224 MsG0480021331.01.T01:CDS
TGAGGAGAATGCCCTCAAAT+TGG 0.371449 4:-56771169 None:intergenic
CTCTGGTGCCATTCTCTTTG+AGG 0.372847 4:+56770151 MsG0480021331.01.T01:CDS
CAGAAGATTGACGGAGGGTT+TGG 0.375682 4:-56769184 None:intergenic
TGAAGTAGCACAAAAGGTTT+GGG 0.375792 4:+56771112 MsG0480021331.01.T01:CDS
CTGGTGACAGTTCCATCTCT+TGG 0.383065 4:+56770119 MsG0480021331.01.T01:CDS
TGGCGAAACGAGCACCTTGC+TGG 0.386451 4:-56770538 None:intergenic
AACGACACGTGCCATGGGTT+TGG 0.390092 4:-56771529 None:intergenic
TGCTACTTGTGGGAAGCGTT+TGG 0.390936 4:+56770043 MsG0480021331.01.T01:CDS
CCCAGCTGTCCCTGGTATCA+TGG 0.393404 4:+56771289 MsG0480021331.01.T01:CDS
CAAGGAAGCAGCCTGGGGTC+TGG 0.397653 4:+56770743 MsG0480021331.01.T01:CDS
TGGGTTTGGAGATTGGTTCA+TGG 0.399088 4:-56771515 None:intergenic
GTATAGTCAGCAACTGTTGC+AGG 0.413690 4:-56771239 None:intergenic
TGCAGTCAAGGAAGCAGCCT+GGG 0.414972 4:+56770737 MsG0480021331.01.T01:CDS
GCAAGAGCAGAGGGACCGTT+GGG 0.420467 4:-56770717 None:intergenic
GCTCTGATAGTGAGGCTTGA+TGG 0.420587 4:-56769236 None:intergenic
TCCTTCCATCTGTTGTGGAT+TGG 0.437495 4:-56770184 None:intergenic
TACAACTTAATAATATCTCT+TGG 0.451646 4:+56771891 MsG0480021331.01.T01:three_prime_UTR
GCATAAGTTGTGTGGTAAAG+AGG 0.452795 4:+56769044 MsG0480021331.01.T01:five_prime_UTR
AGCACAAAAGGTTTGGGCTG+AGG 0.454604 4:+56771118 MsG0480021331.01.T01:CDS
AAGGTGCTCGTTTCGCCAAA+TGG 0.463790 4:+56770543 MsG0480021331.01.T01:CDS
AGTTGGACTTAGCACGGAAA+AGG 0.464478 4:-56771636 None:intergenic
TCCAACTCAATTGCTCAACT+TGG 0.471150 4:+56771652 MsG0480021331.01.T01:CDS
GAACCAGAGATCTTGCTTGA+TGG 0.472497 4:+56771065 MsG0480021331.01.T01:CDS
GTTCATGGCATTCAAGTTGA+GGG 0.472908 4:-56771500 None:intergenic
AATCTTCCTTCCATCTGTTG+TGG 0.472992 4:-56770189 None:intergenic
TGAGAACAATGTCCAATTTG+AGG 0.474283 4:+56771157 MsG0480021331.01.T01:CDS
AATTAATGACGGAAAATGAA+TGG 0.474522 4:+56771787 MsG0480021331.01.T01:three_prime_UTR
AGATCTCTGGTTCCACAATT+GGG 0.476937 4:-56771055 None:intergenic
TTGGCACCATGACTCATCAT+TGG 0.492416 4:-56770477 None:intergenic
GTGAAGTGATGTCTCATTTG+AGG 0.492762 4:-56768984 None:intergenic
TCCCTCTGCTCTTGCAGTCA+AGG 0.493044 4:+56770725 MsG0480021331.01.T01:CDS
TTGCAGTCAAGGAAGCAGCC+TGG 0.495043 4:+56770736 MsG0480021331.01.T01:CDS
TCGTTACGCTGCAATTAGTC+AGG 0.496794 4:+56770767 MsG0480021331.01.T01:CDS
CCAGAAGAGTACGCCATGCT+TGG 0.498533 4:-56770100 None:intergenic
TCCACATGTCAAGTGATGAT+AGG 0.498626 4:+56768947 MsG0480021331.01.T01:five_prime_UTR
TCTCTTGGAGAGTACATCTC+TGG 0.498855 4:+56770134 MsG0480021331.01.T01:CDS
GGAAGCGTTTGGCTTCAATT+GGG 0.502252 4:+56770054 MsG0480021331.01.T01:CDS
TGCAAGAGCAGAGGGACCGT+TGG 0.502898 4:-56770718 None:intergenic
AAGAAGGAATTGTTTGTCAA+AGG 0.507696 4:+56771709 MsG0480021331.01.T01:CDS
AAAGAGGTTTATTGTTGTGA+GGG 0.511583 4:+56769060 MsG0480021331.01.T01:five_prime_UTR
GCATTGCTGGTTTAAATGGA+TGG 0.512547 4:-56768898 None:intergenic
GTGAGGCTTGATGGAGCGGT+GGG 0.512814 4:-56769227 None:intergenic
GAGAACAATGTCCAATTTGA+GGG 0.514083 4:+56771158 MsG0480021331.01.T01:CDS
GGGCCGCATAGAGAACGTTC+AGG 0.515647 4:+56771597 MsG0480021331.01.T01:CDS
CTCATCATTGGAACCAGCAA+GGG 0.517446 4:-56770465 None:intergenic
CTTAACGAGCTCATCGGCAT+AGG 0.518044 4:-56769264 None:intergenic
CCATGCTTGGCGGTTAACTT+CGG 0.520579 4:-56770087 None:intergenic
TCCTTGACTGCAAGAGCAGA+GGG 0.521193 4:-56770726 None:intergenic
ACCTTGTCAACTTTGATACC+AGG 0.524302 4:-56770242 None:intergenic
TAAAGAGGTTTATTGTTGTG+AGG 0.524538 4:+56769059 MsG0480021331.01.T01:five_prime_UTR
TTCTCCTGTGAAGGAGCTTG+AGG 0.524713 4:-56771262 None:intergenic
CTCTACCAATCCACAACAGA+TGG 0.525359 4:+56770179 MsG0480021331.01.T01:CDS
TTGTTCTTGACAAGTCTGAA+TGG 0.530442 4:+56769153 MsG0480021331.01.T01:CDS
GGTTCATGGCATTCAAGTTG+AGG 0.530771 4:-56771501 None:intergenic
ACGTGTCGTTCTCATATGCA+AGG 0.531955 4:+56771542 MsG0480021331.01.T01:CDS
TATGAGAACGACACGTGCCA+TGG 0.532775 4:-56771535 None:intergenic
CAACGGATTGGTCCCAATTG+TGG 0.534112 4:+56771043 MsG0480021331.01.T01:CDS
ATACCCTCAAGCTCCTTCAC+AGG 0.534468 4:+56771258 MsG0480021331.01.T01:CDS
GAAGAGTACGCCATGCTTGG+CGG 0.536715 4:-56770097 None:intergenic
TCTCCATCAAGCAAGATCTC+TGG 0.540606 4:-56771068 None:intergenic
TCTCCTGTGAAGGAGCTTGA+GGG 0.542263 4:-56771261 None:intergenic
GTCAGCAACTGTTGCAGGAG+AGG 0.545139 4:-56771234 None:intergenic
CCATGATACCAGGGACAGCT+GGG 0.545501 4:-56771289 None:intergenic
ACGCTTCCCACAAGTAGCAT+TGG 0.547732 4:-56770039 None:intergenic
TGTTCTTGACAAGTCTGAAT+GGG 0.550387 4:+56769154 MsG0480021331.01.T01:CDS
GAGAGTCTCCTCAAAGAGAA+TGG 0.550591 4:-56770159 None:intergenic
AAGCCTAGCATGGTTACTCC+AGG 0.551395 4:+56771191 MsG0480021331.01.T01:CDS
TGAATCTGAGGAAGCCAAGA+AGG 0.552492 4:+56771693 MsG0480021331.01.T01:CDS
GCTCCTGGAGTAACCATGCT+AGG 0.553694 4:-56771194 None:intergenic
CACTGGTGAGGGTGAATCTG+AGG 0.554064 4:+56771681 MsG0480021331.01.T01:CDS
TCCAAGTTGAGCAATTGAGT+TGG 0.559400 4:-56771653 None:intergenic
TCAAGCCTCACTATCAGAGC+TGG 0.559579 4:+56769239 MsG0480021331.01.T01:CDS
AAAACACCGCATTGAAGACA+TGG 0.562057 4:+56771572 MsG0480021331.01.T01:CDS
GGATGATAACAATGCTTGCT+TGG 0.562542 4:-56768927 None:intergenic
AGTGAGGCTTGATGGAGCGG+TGG 0.562696 4:-56769228 None:intergenic
ATCTTGCTTGATGGAGAACA+TGG 0.567139 4:+56771074 MsG0480021331.01.T01:CDS
ACCTATCATCACTTGACATG+TGG 0.567903 4:-56768948 None:intergenic
TACTCCAGGAGCTGAGTGCA+AGG 0.568532 4:+56771205 MsG0480021331.01.T01:CDS
ACCGCATTGAAGACATGGGG+GGG 0.570724 4:+56771577 MsG0480021331.01.T01:CDS
TGACAAGTCTGAATGGGTGA+AGG 0.573443 4:+56769160 MsG0480021331.01.T01:CDS
AGGAGCTGAGTGCAAGGACA+AGG 0.577780 4:+56771211 MsG0480021331.01.T01:CDS
CAATTGAGTTGGACTTAGCA+CGG 0.579344 4:-56771642 None:intergenic
AGCGTAACGAGCCAGACCCC+AGG 0.579515 4:-56770754 None:intergenic
CAGAAAACAATTGCTTCACC+AGG 0.579605 4:+56769990 MsG0480021331.01.T01:intron
TTTGTCTGGTGGACAATCTG+AGG 0.579742 4:+56771468 MsG0480021331.01.T01:CDS
GTGTCACATACCATGATACC+AGG 0.579988 4:-56771299 None:intergenic
AGTAGCATTGGACTCATCCA+TGG 0.582662 4:-56770027 None:intergenic
CGCGGTCTTAACGAGCTCAT+CGG 0.585953 4:-56769270 None:intergenic
ACTCATCATTGGAACCAGCA+AGG 0.586276 4:-56770466 None:intergenic
TTTAATGGTTATTAGGACAA+CGG 0.587505 4:+56771026 MsG0480021331.01.T01:intron
ATGAGAACGACACGTGCCAT+GGG 0.588604 4:-56771534 None:intergenic
CTGGTTCCAATGATGAGTCA+TGG 0.590508 4:+56770471 MsG0480021331.01.T01:CDS
AATGATGAGTCATGGTGCCA+AGG 0.590718 4:+56770479 MsG0480021331.01.T01:CDS
CATTCTCCTCAAGCCTAGCA+TGG 0.591042 4:+56771181 MsG0480021331.01.T01:CDS
CAGAGGATACAGAAGATTGA+CGG 0.591621 4:-56769193 None:intergenic
ATGGCCAAAATACCACGTCC+TGG 0.591708 4:-56770008 None:intergenic
TTCCTTGACTGCAAGAGCAG+AGG 0.592530 4:-56770727 None:intergenic
GACAAGTCTGAATGGGTGAA+GGG 0.593403 4:+56769161 MsG0480021331.01.T01:CDS
AGGCAAGACCGTCTAGACCT+TGG 0.593561 4:-56770496 None:intergenic
GATAGTGAGGCTTGATGGAG+CGG 0.598737 4:-56769231 None:intergenic
TCATGGTGCCAAGGTCTAGA+CGG 0.600249 4:+56770488 MsG0480021331.01.T01:CDS
GAGATGTACTCTCCAAGAGA+TGG 0.600655 4:-56770131 None:intergenic
AAAGAAGTGCATAAGTTGTG+TGG 0.601057 4:+56769036 MsG0480021331.01.T01:five_prime_UTR
CCGAAGTTAACCGCCAAGCA+TGG 0.601093 4:+56770087 MsG0480021331.01.T01:CDS
ATGAGTCCAATGCTACTTGT+GGG 0.603827 4:+56770033 MsG0480021331.01.T01:CDS
ATTGGACATTGTTCTCAGCA+AGG 0.604841 4:-56771151 None:intergenic
TGGTTATTAGGACAACGGAT+TGG 0.604956 4:+56771031 MsG0480021331.01.T01:intron
AGGAACCAGCTCTGATAGTG+AGG 0.605775 4:-56769244 None:intergenic
TCCTGGTATCAAAGTTGACA+AGG 0.608575 4:+56770241 MsG0480021331.01.T01:CDS
ACAATTGCTTCACCAGGACG+TGG 0.615870 4:+56769996 MsG0480021331.01.T01:CDS
GAGTAACCATGCTAGGCTTG+AGG 0.616311 4:-56771187 None:intergenic
CTTGGAAAGTACACTGGTGA+GGG 0.616339 4:+56771670 MsG0480021331.01.T01:CDS
GAAAAGAGATGCTGATGCAG+AGG 0.620632 4:-56769120 None:intergenic
GCAGCATCAACAATTAATGA+CGG 0.626376 4:+56771776 MsG0480021331.01.T01:three_prime_UTR
ACCAATCCACAACAGATGGA+AGG 0.626896 4:+56770183 MsG0480021331.01.T01:CDS
CGTGTCGTTCTCATATGCAA+GGG 0.627400 4:+56771543 MsG0480021331.01.T01:CDS
ACTTGGAAAGTACACTGGTG+AGG 0.631708 4:+56771669 MsG0480021331.01.T01:CDS
GATGAGTCCAATGCTACTTG+TGG 0.631942 4:+56770032 MsG0480021331.01.T01:CDS
GGATACAGAAGATTGACGGA+GGG 0.632510 4:-56769189 None:intergenic
AAACACCGCATTGAAGACAT+GGG 0.633038 4:+56771573 MsG0480021331.01.T01:CDS
CTTGTACGACTAGTAACACA+AGG 0.644454 4:+56768815 MsG0480021331.01.T01:intron
GTAGTATGCAGCTGAACGAG+AGG 0.646365 4:-56770516 None:intergenic
GCAGTCAAGGAAGCAGCCTG+GGG 0.647968 4:+56770738 MsG0480021331.01.T01:CDS
TGAACCAATCTCCAAACCCA+TGG 0.649676 4:+56771518 MsG0480021331.01.T01:CDS
TCTTGTTAGACAGTAAACAA+TGG 0.656611 4:+56769097 MsG0480021331.01.T01:exon
GCTCAACTTGGAAAGTACAC+TGG 0.658104 4:+56771664 MsG0480021331.01.T01:CDS
CATGATACCAGGGACAGCTG+GGG 0.665632 4:-56771288 None:intergenic
TCATCATTGGAACCAGCAAG+GGG 0.668545 4:-56770464 None:intergenic
TCAGCTGCATACTACCAGCA+AGG 0.670241 4:+56770524 MsG0480021331.01.T01:CDS
ACTGTTGTGAGCATCCCCAA+CGG 0.671641 4:+56770702 MsG0480021331.01.T01:CDS
ATGATACCAGGGACAGCTGG+GGG 0.672628 4:-56771287 None:intergenic
AACACCGCATTGAAGACATG+GGG 0.674958 4:+56771574 MsG0480021331.01.T01:CDS
TGAGGCTTGATGGAGCGGTG+GGG 0.676221 4:-56769226 None:intergenic
GGTGGGGTTGCATCGTACAG+AGG 0.686086 4:-56769210 None:intergenic
CACCGCATTGAAGACATGGG+GGG 0.686513 4:+56771576 MsG0480021331.01.T01:CDS
CAAGAGCAGAGGGACCGTTG+GGG 0.691799 4:-56770716 None:intergenic
AGGATACAGAAGATTGACGG+AGG 0.691919 4:-56769190 None:intergenic
CTGCCTGAACGTTCTCTATG+CGG 0.699670 4:-56771600 None:intergenic
ACACCGCATTGAAGACATGG+GGG 0.702030 4:+56771575 MsG0480021331.01.T01:CDS
CGATGAGCTCGTTAAGACCG+CGG 0.717465 4:+56769271 MsG0480021331.01.T01:CDS
TGTCACATACCATGATACCA+GGG 0.730745 4:-56771298 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACATTTTATTTTATTCAAA+TGG - Chr4:56769674-56769693 None:intergenic 10.0%
!!! ATATTTTTTCTAGAAAATAT+AGG + Chr4:56769842-56769861 MsG0480021331.01.T01:intron 10.0%
!!! ATTATAGTTCATTTTTTAAA+CGG + Chr4:56768864-56768883 MsG0480021331.01.T01:five_prime_UTR 10.0%
!! GCTAAAATTTATTCATTTAA+TGG + Chr4:56771011-56771030 MsG0480021331.01.T01:intron 15.0%
!! TTATTCATTTAATGGTTATT+AGG + Chr4:56771019-56771038 MsG0480021331.01.T01:intron 15.0%
!!! ATTTGTTTTTTTTATACTGT+TGG + Chr4:56770618-56770637 MsG0480021331.01.T01:intron 15.0%
!!! TTTAATTCTTTTTTGTATAG+TGG + Chr4:56769391-56769410 MsG0480021331.01.T01:intron 15.0%
!!! TTTTATCAACAATGTAAAAT+TGG - Chr4:56769909-56769928 None:intergenic 15.0%
!! AATACAAAGAACAATGTATT+TGG - Chr4:56771328-56771347 None:intergenic 20.0%
!! CAAAATACAATATACAACTT+TGG - Chr4:56771436-56771455 None:intergenic 20.0%
!! TACAACTTAATAATATCTCT+TGG + Chr4:56771891-56771910 MsG0480021331.01.T01:three_prime_UTR 20.0%
!! TATGAACAAAGATAAAAGTT+TGG - Chr4:56771351-56771370 None:intergenic 20.0%
!!! ACTATAATTGTTACTCTTTT+TGG + Chr4:56768779-56768798 MsG0480021331.01.T01:five_prime_UTR 20.0%
!!! ATTTTCAATAGTGTCTTATT+TGG + Chr4:56769504-56769523 MsG0480021331.01.T01:intron 20.0%
! AAGTTCATCAATAGTATACA+TGG - Chr4:56769450-56769469 None:intergenic 25.0%
! CTAAGTTCAGTTATACTAAT+TGG - Chr4:56769322-56769341 None:intergenic 25.0%
! TGAAATCCTTATAACTTATG+TGG + Chr4:56769693-56769712 MsG0480021331.01.T01:intron 25.0%
! TTACAAAGAGTAATTCCAAA+TGG - Chr4:56770271-56770290 None:intergenic 25.0%
! TTTAATGGTTATTAGGACAA+CGG + Chr4:56771026-56771045 MsG0480021331.01.T01:intron 25.0%
!! AATTAATGACGGAAAATGAA+TGG + Chr4:56771787-56771806 MsG0480021331.01.T01:three_prime_UTR 25.0%
!! TGGTTTATGTTCTATCATTT+TGG - Chr4:56771958-56771977 None:intergenic 25.0%
!! TGTTATGTATAGTTTTTGTC+TGG + Chr4:56771454-56771473 MsG0480021331.01.T01:intron 25.0%
!!! AAATGAATAAATTTTAGCCG+AGG - Chr4:56771009-56771028 None:intergenic 25.0%
!!! GTGTAATGTTTTTATAGTCT+TGG + Chr4:56771836-56771855 MsG0480021331.01.T01:three_prime_UTR 25.0%
AAAGAGGTTTATTGTTGTGA+GGG + Chr4:56769060-56769079 MsG0480021331.01.T01:five_prime_UTR 30.0%
AAGAAGGAATTGTTTGTCAA+AGG + Chr4:56771709-56771728 MsG0480021331.01.T01:CDS 30.0%
AATCACTTGTATAACTTGAG+TGG - Chr4:56770801-56770820 None:intergenic 30.0%
ACTCTGATTCTATTCAAAGT+TGG + Chr4:56769748-56769767 MsG0480021331.01.T01:intron 30.0%
AGTCACAGAACATAAACATA+AGG - Chr4:56770424-56770443 None:intergenic 30.0%
AGTGTAATATCATCATCACT+TGG - Chr4:56769788-56769807 None:intergenic 30.0%
ATATGTGATTGAAATTCGCT+TGG - Chr4:56770675-56770694 None:intergenic 30.0%
ATGGAAAGGGACATTAAAAT+TGG + Chr4:56769717-56769736 MsG0480021331.01.T01:intron 30.0%
GCGAATTTCAATCACATATT+AGG + Chr4:56770676-56770695 MsG0480021331.01.T01:intron 30.0%
TAAAGAGGTTTATTGTTGTG+AGG + Chr4:56769059-56769078 MsG0480021331.01.T01:five_prime_UTR 30.0%
TCTTGTTAGACAGTAAACAA+TGG + Chr4:56769097-56769116 MsG0480021331.01.T01:exon 30.0%
TTAAGTTAAGTATCATACCG+CGG - Chr4:56769291-56769310 None:intergenic 30.0%
TTCTGTGACTATGAACAATA+GGG + Chr4:56770434-56770453 MsG0480021331.01.T01:intron 30.0%
TTTGACAAACAATTCCTTCT+TGG - Chr4:56771710-56771729 None:intergenic 30.0%
! ATGCTCTAAGTAGATAAACA+TGG - Chr4:56769486-56769505 None:intergenic 30.0%
! GTGAGATTGATTTAAAACCT+CGG + Chr4:56770989-56771008 MsG0480021331.01.T01:intron 30.0%
! TATGTATAGTTTTTGTCTGG+TGG + Chr4:56771457-56771476 MsG0480021331.01.T01:intron 30.0%
!! TAGTTTTCAAACTAGCTTGT+TGG + Chr4:56769419-56769438 MsG0480021331.01.T01:intron 30.0%
!! TATTTTATGTTGCTTGTGTG+TGG + Chr4:56769964-56769983 MsG0480021331.01.T01:intron 30.0%
!!! AACTTTTGAAGTAGCACAAA+AGG + Chr4:56771106-56771125 MsG0480021331.01.T01:CDS 30.0%
!!! AATTTTGATTTTGCTTCCAC+AGG - Chr4:56770588-56770607 None:intergenic 30.0%
!!! CATCAAGGTTTTTTATGTCT+TGG + Chr4:56770898-56770917 MsG0480021331.01.T01:intron 30.0%
!!! TTGGAGACTATTTTTGTTTG+TGG + Chr4:56771855-56771874 MsG0480021331.01.T01:three_prime_UTR 30.0%
!!! TTTGGTTTTACTACTAGAGA+TGG + Chr4:56769522-56769541 MsG0480021331.01.T01:intron 30.0%
AAGAAAGTGAGTGAAGGAAA+AGG + Chr4:56769607-56769626 MsG0480021331.01.T01:intron 35.0%
AAGGAGTTCAAAGTGAGATA+AGG + Chr4:56769626-56769645 MsG0480021331.01.T01:intron 35.0%
AGACTTAAGAAAGTGAGTGA+AGG + Chr4:56769601-56769620 MsG0480021331.01.T01:intron 35.0%
AGAGATGGTTGAATTTCATG+TGG + Chr4:56769537-56769556 MsG0480021331.01.T01:intron 35.0%
ATAACTTATGTGGCATGGAA+AGG + Chr4:56769703-56769722 MsG0480021331.01.T01:intron 35.0%
GAAATAAGCAGACATCACAA+TGG - Chr4:56770376-56770395 None:intergenic 35.0%
GAGAACAATGTCCAATTTGA+GGG + Chr4:56771158-56771177 MsG0480021331.01.T01:CDS 35.0%
GCAGCATCAACAATTAATGA+CGG + Chr4:56771776-56771795 MsG0480021331.01.T01:three_prime_UTR 35.0%
GTTCTGTGACTATGAACAAT+AGG + Chr4:56770433-56770452 MsG0480021331.01.T01:intron 35.0%
TAACTTATGTGGCATGGAAA+GGG + Chr4:56769704-56769723 MsG0480021331.01.T01:intron 35.0%
TCAAGTAGACACTAACCATT+TGG - Chr4:56770561-56770580 None:intergenic 35.0%
TCCATGCCACATAAGTTATA+AGG - Chr4:56769702-56769721 None:intergenic 35.0%
TCCTTATAACTTATGTGGCA+TGG + Chr4:56769698-56769717 MsG0480021331.01.T01:intron 35.0%
TGAAGTAGCACAAAAGGTTT+GGG + Chr4:56771112-56771131 MsG0480021331.01.T01:CDS 35.0%
TGACTATGAACAATAGGGTT+TGG + Chr4:56770439-56770458 MsG0480021331.01.T01:intron 35.0%
TGAGAACAATGTCCAATTTG+AGG + Chr4:56771157-56771176 MsG0480021331.01.T01:CDS 35.0%
TGTTCTTGACAAGTCTGAAT+GGG + Chr4:56769154-56769173 MsG0480021331.01.T01:CDS 35.0%
TTGAAGTAGCACAAAAGGTT+TGG + Chr4:56771111-56771130 MsG0480021331.01.T01:CDS 35.0%
TTGTTCTTGACAAGTCTGAA+TGG + Chr4:56769153-56769172 MsG0480021331.01.T01:CDS 35.0%
! AAAGAAGTGCATAAGTTGTG+TGG + Chr4:56769036-56769055 MsG0480021331.01.T01:five_prime_UTR 35.0%
!! TTCTGCATTGCTGGTTTAAA+TGG - Chr4:56768905-56768924 None:intergenic 35.0%
!!! GGATCACGGAACTTTTTTAA+AGG - Chr4:56770864-56770883 None:intergenic 35.0%
AAAACACCGCATTGAAGACA+TGG + Chr4:56771572-56771591 MsG0480021331.01.T01:CDS 40.0%
AAACACCGCATTGAAGACAT+GGG + Chr4:56771573-56771592 MsG0480021331.01.T01:CDS 40.0%
AATCTTCCTTCCATCTGTTG+TGG - Chr4:56770192-56770211 None:intergenic 40.0%
ACAATATGAAGCAACGACAC+AGG + Chr4:56771370-56771389 MsG0480021331.01.T01:intron 40.0%
ACAATGGTATCAACTAGCAC+TGG - Chr4:56770360-56770379 None:intergenic 40.0%
ACCTATCATCACTTGACATG+TGG - Chr4:56768951-56768970 None:intergenic 40.0%
ACCTTGTCAACTTTGATACC+AGG - Chr4:56770245-56770264 None:intergenic 40.0%
AGTTGACAAGGTATGCCATT+TGG + Chr4:56770253-56770272 MsG0480021331.01.T01:intron 40.0%
ATCGAGCAAAACATTGTTCC+TGG + Chr4:56770224-56770243 MsG0480021331.01.T01:CDS 40.0%
ATCTTGCTTGATGGAGAACA+TGG + Chr4:56771074-56771093 MsG0480021331.01.T01:CDS 40.0%
ATTGGACATTGTTCTCAGCA+AGG - Chr4:56771154-56771173 None:intergenic 40.0%
CAATGGTATCAACTAGCACT+GGG - Chr4:56770359-56770378 None:intergenic 40.0%
CAGAAAACAATTGCTTCACC+AGG + Chr4:56769990-56770009 MsG0480021331.01.T01:intron 40.0%
CAGAGGATACAGAAGATTGA+CGG - Chr4:56769196-56769215 None:intergenic 40.0%
CTTGTACGACTAGTAACACA+AGG + Chr4:56768815-56768834 MsG0480021331.01.T01:intron 40.0%
GCATAAGTTGTGTGGTAAAG+AGG + Chr4:56769044-56769063 MsG0480021331.01.T01:five_prime_UTR 40.0%
GGATGATAACAATGCTTGCT+TGG - Chr4:56768930-56768949 None:intergenic 40.0%
GTGAAGTGATGTCTCATTTG+AGG - Chr4:56768987-56769006 None:intergenic 40.0%
TCCAACTCAATTGCTCAACT+TGG + Chr4:56771652-56771671 MsG0480021331.01.T01:CDS 40.0%
TCCACATGTCAAGTGATGAT+AGG + Chr4:56768947-56768966 MsG0480021331.01.T01:five_prime_UTR 40.0%
TCCTGGTATCAAAGTTGACA+AGG + Chr4:56770241-56770260 MsG0480021331.01.T01:CDS 40.0%
TGGTTATTAGGACAACGGAT+TGG + Chr4:56771031-56771050 MsG0480021331.01.T01:intron 40.0%
TGTCACATACCATGATACCA+GGG - Chr4:56771301-56771320 None:intergenic 40.0%
! AAGATCTCTGGTTCCACAAT+TGG - Chr4:56771059-56771078 None:intergenic 40.0%
! AGATCTCTGGTTCCACAATT+GGG - Chr4:56771058-56771077 None:intergenic 40.0%
! ATGAGTCCAATGCTACTTGT+GGG + Chr4:56770033-56770052 MsG0480021331.01.T01:CDS 40.0%
! ATGTCTTCAATGCGGTGTTT+TGG - Chr4:56771573-56771592 None:intergenic 40.0%
! CTTGATGTTGCTGTTAGAGT+CGG - Chr4:56770885-56770904 None:intergenic 40.0%
! TCCAAGTTGAGCAATTGAGT+TGG - Chr4:56771656-56771675 None:intergenic 40.0%
!! CAATTGAGTTGGACTTAGCA+CGG - Chr4:56771645-56771664 None:intergenic 40.0%
!! GCATTGCTGGTTTAAATGGA+TGG - Chr4:56768901-56768920 None:intergenic 40.0%
!! GTTCATGGCATTCAAGTTGA+GGG - Chr4:56771503-56771522 None:intergenic 40.0%
!! TTTGATTTTGCTTCCACAGG+AGG - Chr4:56770585-56770604 None:intergenic 40.0%
AACACCGCATTGAAGACATG+GGG + Chr4:56771574-56771593 MsG0480021331.01.T01:CDS 45.0%
ACCAATCCACAACAGATGGA+AGG + Chr4:56770183-56770202 MsG0480021331.01.T01:CDS 45.0%
ACTCATCATTGGAACCAGCA+AGG - Chr4:56770469-56770488 None:intergenic 45.0%
AGGATACAGAAGATTGACGG+AGG - Chr4:56769193-56769212 None:intergenic 45.0%
AGTTGGACTTAGCACGGAAA+AGG - Chr4:56771639-56771658 None:intergenic 45.0%
CGACTCTAACAGCAACATCA+AGG + Chr4:56770883-56770902 MsG0480021331.01.T01:intron 45.0%
CTCATCATTGGAACCAGCAA+GGG - Chr4:56770468-56770487 None:intergenic 45.0%
CTCTACCAATCCACAACAGA+TGG + Chr4:56770179-56770198 MsG0480021331.01.T01:CDS 45.0%
CTGGTTCCAATGATGAGTCA+TGG + Chr4:56770471-56770490 MsG0480021331.01.T01:CDS 45.0%
GAAAAGAGATGCTGATGCAG+AGG - Chr4:56769123-56769142 None:intergenic 45.0%
GAACCAGAGATCTTGCTTGA+TGG + Chr4:56771065-56771084 MsG0480021331.01.T01:CDS 45.0%
GAACGTGTTAGTATCGTGTC+TGG - Chr4:56771404-56771423 None:intergenic 45.0%
GACAAGTCTGAATGGGTGAA+GGG + Chr4:56769161-56769180 MsG0480021331.01.T01:CDS 45.0%
GAGAGTCTCCTCAAAGAGAA+TGG - Chr4:56770162-56770181 None:intergenic 45.0%
GAGATGTACTCTCCAAGAGA+TGG - Chr4:56770134-56770153 None:intergenic 45.0%
GGATACAGAAGATTGACGGA+GGG - Chr4:56769192-56769211 None:intergenic 45.0%
GTATAGTCAGCAACTGTTGC+AGG - Chr4:56771242-56771261 None:intergenic 45.0%
GTGTCACATACCATGATACC+AGG - Chr4:56771302-56771321 None:intergenic 45.0%
TCATCATTGGAACCAGCAAG+GGG - Chr4:56770467-56770486 None:intergenic 45.0%
TCCTTCCATCTGTTGTGGAT+TGG - Chr4:56770187-56770206 None:intergenic 45.0%
TCGTTACGCTGCAATTAGTC+AGG + Chr4:56770767-56770786 MsG0480021331.01.T01:CDS 45.0%
TCTCCATCAAGCAAGATCTC+TGG - Chr4:56771071-56771090 None:intergenic 45.0%
TGAACCAATCTCCAAACCCA+TGG + Chr4:56771518-56771537 MsG0480021331.01.T01:CDS 45.0%
TGAATCTGAGGAAGCCAAGA+AGG + Chr4:56771693-56771712 MsG0480021331.01.T01:CDS 45.0%
TGACAAGTCTGAATGGGTGA+AGG + Chr4:56769160-56769179 MsG0480021331.01.T01:CDS 45.0%
TGAGGAGAATGCCCTCAAAT+TGG - Chr4:56771172-56771191 None:intergenic 45.0%
TGCTTGGTATTCTGCATTGC+TGG - Chr4:56768914-56768933 None:intergenic 45.0%
TTGGCACCATGACTCATCAT+TGG - Chr4:56770480-56770499 None:intergenic 45.0%
! AATGATGAGTCATGGTGCCA+AGG + Chr4:56770479-56770498 MsG0480021331.01.T01:CDS 45.0%
! ACGTGTCGTTCTCATATGCA+AGG + Chr4:56771542-56771561 MsG0480021331.01.T01:CDS 45.0%
! ACTTGGAAAGTACACTGGTG+AGG + Chr4:56771669-56771688 MsG0480021331.01.T01:CDS 45.0%
! AGTAGCATTGGACTCATCCA+TGG - Chr4:56770030-56770049 None:intergenic 45.0%
! CGTGTCGTTCTCATATGCAA+GGG + Chr4:56771543-56771562 MsG0480021331.01.T01:CDS 45.0%
! CTTGGAAAGTACACTGGTGA+GGG + Chr4:56771670-56771689 MsG0480021331.01.T01:CDS 45.0%
! GATGAGTCCAATGCTACTTG+TGG + Chr4:56770032-56770051 MsG0480021331.01.T01:CDS 45.0%
! GCTCAACTTGGAAAGTACAC+TGG + Chr4:56771664-56771683 MsG0480021331.01.T01:CDS 45.0%
! TCTCTTGGAGAGTACATCTC+TGG + Chr4:56770134-56770153 MsG0480021331.01.T01:CDS 45.0%
! TGGGTTTGGAGATTGGTTCA+TGG - Chr4:56771518-56771537 None:intergenic 45.0%
! TTCACCAGGACGTGGTATTT+TGG + Chr4:56770004-56770023 MsG0480021331.01.T01:CDS 45.0%
! TTGCTGTTAGAGTCGGATCA+CGG - Chr4:56770878-56770897 None:intergenic 45.0%
! TTTGTCTGGTGGACAATCTG+AGG + Chr4:56771468-56771487 MsG0480021331.01.T01:CDS 45.0%
!! GGAAGCGTTTGGCTTCAATT+GGG + Chr4:56770054-56770073 MsG0480021331.01.T01:CDS 45.0%
!! GGTTCATGGCATTCAAGTTG+AGG - Chr4:56771504-56771523 None:intergenic 45.0%
AAGCCTAGCATGGTTACTCC+AGG + Chr4:56771191-56771210 MsG0480021331.01.T01:CDS 50.0%
ACAATTGCTTCACCAGGACG+TGG + Chr4:56769996-56770015 MsG0480021331.01.T01:CDS 50.0%
ACACCGCATTGAAGACATGG+GGG + Chr4:56771575-56771594 MsG0480021331.01.T01:CDS 50.0%
ACGCTTCCCACAAGTAGCAT+TGG - Chr4:56770042-56770061 None:intergenic 50.0%
ACTGTTGTGAGCATCCCCAA+CGG + Chr4:56770702-56770721 MsG0480021331.01.T01:CDS 50.0%
AGCACAAAAGGTTTGGGCTG+AGG + Chr4:56771118-56771137 MsG0480021331.01.T01:CDS 50.0%
ATACCCTCAAGCTCCTTCAC+AGG + Chr4:56771258-56771277 MsG0480021331.01.T01:CDS 50.0%
ATGAGAACGACACGTGCCAT+GGG - Chr4:56771537-56771556 None:intergenic 50.0%
ATGGCCAAAATACCACGTCC+TGG - Chr4:56770011-56770030 None:intergenic 50.0%
CAGAAGATTGACGGAGGGTT+TGG - Chr4:56769187-56769206 None:intergenic 50.0%
CATTCTCCTCAAGCCTAGCA+TGG + Chr4:56771181-56771200 MsG0480021331.01.T01:CDS 50.0%
CCATGCTTGGCGGTTAACTT+CGG - Chr4:56770090-56770109 None:intergenic 50.0%
CTGCCTGAACGTTCTCTATG+CGG - Chr4:56771603-56771622 None:intergenic 50.0%
CTGGTGACAGTTCCATCTCT+TGG + Chr4:56770119-56770138 MsG0480021331.01.T01:CDS 50.0%
CTTAACGAGCTCATCGGCAT+AGG - Chr4:56769267-56769286 None:intergenic 50.0%
GAGTAACCATGCTAGGCTTG+AGG - Chr4:56771190-56771209 None:intergenic 50.0%
GATAGTGAGGCTTGATGGAG+CGG - Chr4:56769234-56769253 None:intergenic 50.0%
GTAGTATGCAGCTGAACGAG+AGG - Chr4:56770519-56770538 None:intergenic 50.0%
GTGTCTACTTGATCCTCCTG+TGG + Chr4:56770569-56770588 MsG0480021331.01.T01:intron 50.0%
TATGAGAACGACACGTGCCA+TGG - Chr4:56771538-56771557 None:intergenic 50.0%
TCAAGCCTCACTATCAGAGC+TGG + Chr4:56769239-56769258 MsG0480021331.01.T01:CDS 50.0%
TCAGCTGCATACTACCAGCA+AGG + Chr4:56770524-56770543 MsG0480021331.01.T01:CDS 50.0%
TCCTTGACTGCAAGAGCAGA+GGG - Chr4:56770729-56770748 None:intergenic 50.0%
TCTCCTGTGAAGGAGCTTGA+GGG - Chr4:56771264-56771283 None:intergenic 50.0%
TTCCTTGACTGCAAGAGCAG+AGG - Chr4:56770730-56770749 None:intergenic 50.0%
TTCTCCTGTGAAGGAGCTTG+AGG - Chr4:56771265-56771284 None:intergenic 50.0%
! AAGGTGCTCGTTTCGCCAAA+TGG + Chr4:56770543-56770562 MsG0480021331.01.T01:CDS 50.0%
! AGGAACCAGCTCTGATAGTG+AGG - Chr4:56769247-56769266 None:intergenic 50.0%
! GCTCTGATAGTGAGGCTTGA+TGG - Chr4:56769239-56769258 None:intergenic 50.0%
! TCATGGTGCCAAGGTCTAGA+CGG + Chr4:56770488-56770507 MsG0480021331.01.T01:CDS 50.0%
!! CAACGGATTGGTCCCAATTG+TGG + Chr4:56771043-56771062 MsG0480021331.01.T01:CDS 50.0%
!! CTCTGGTGCCATTCTCTTTG+AGG + Chr4:56770151-56770170 MsG0480021331.01.T01:CDS 50.0%
!! GGGAAGCGTTTGGCTTCAAT+TGG + Chr4:56770053-56770072 MsG0480021331.01.T01:CDS 50.0%
!! TGCTACTTGTGGGAAGCGTT+TGG + Chr4:56770043-56770062 MsG0480021331.01.T01:CDS 50.0%
!!! AGGACGTGGTATTTTGGCCA+TGG + Chr4:56770010-56770029 MsG0480021331.01.T01:CDS 50.0%
AACGACACGTGCCATGGGTT+TGG - Chr4:56771532-56771551 None:intergenic 55.0%
ACCATGATACCAGGGACAGC+TGG - Chr4:56771293-56771312 None:intergenic 55.0%
ACCGCATTGAAGACATGGGG+GGG + Chr4:56771577-56771596 MsG0480021331.01.T01:CDS 55.0%
AGGAGCTGAGTGCAAGGACA+AGG + Chr4:56771211-56771230 MsG0480021331.01.T01:CDS 55.0%
AGGCAAGACCGTCTAGACCT+TGG - Chr4:56770499-56770518 None:intergenic 55.0%
ATGATACCAGGGACAGCTGG+GGG - Chr4:56771290-56771309 None:intergenic 55.0%
CACCGCATTGAAGACATGGG+GGG + Chr4:56771576-56771595 MsG0480021331.01.T01:CDS 55.0%
CACTGGTGAGGGTGAATCTG+AGG + Chr4:56771681-56771700 MsG0480021331.01.T01:CDS 55.0%
CATGATACCAGGGACAGCTG+GGG - Chr4:56771291-56771310 None:intergenic 55.0%
CCAAGCATGGCGTACTCTTC+TGG + Chr4:56770100-56770119 MsG0480021331.01.T01:CDS 55.0%
CCATGATACCAGGGACAGCT+GGG - Chr4:56771292-56771311 None:intergenic 55.0%
CCGAAGTTAACCGCCAAGCA+TGG + Chr4:56770087-56770106 MsG0480021331.01.T01:CDS 55.0%
CGATGAGCTCGTTAAGACCG+CGG + Chr4:56769271-56769290 MsG0480021331.01.T01:CDS 55.0%
CGCGGTCTTAACGAGCTCAT+CGG - Chr4:56769273-56769292 None:intergenic 55.0%
CGTGCCATGGGTTTGGAGAT+TGG - Chr4:56771525-56771544 None:intergenic 55.0%
CTGGGGGAATTCTCCTGTGA+AGG - Chr4:56771274-56771293 None:intergenic 55.0%
GCTCCTGGAGTAACCATGCT+AGG - Chr4:56771197-56771216 None:intergenic 55.0%
GTCAGCAACTGTTGCAGGAG+AGG - Chr4:56771237-56771256 None:intergenic 55.0%
TACTCCAGGAGCTGAGTGCA+AGG + Chr4:56771205-56771224 MsG0480021331.01.T01:CDS 55.0%
TCCCTCTGCTCTTGCAGTCA+AGG + Chr4:56770725-56770744 MsG0480021331.01.T01:CDS 55.0%
TGCAGTCAAGGAAGCAGCCT+GGG + Chr4:56770737-56770756 MsG0480021331.01.T01:CDS 55.0%
TTGCAGTCAAGGAAGCAGCC+TGG + Chr4:56770736-56770755 MsG0480021331.01.T01:CDS 55.0%
TTGTCCTTGCACTCAGCTCC+TGG - Chr4:56771212-56771231 None:intergenic 55.0%
! CCAGAAGAGTACGCCATGCT+TGG - Chr4:56770103-56770122 None:intergenic 55.0%
! GAAGAGTACGCCATGCTTGG+CGG - Chr4:56770100-56770119 None:intergenic 55.0%
AGAATTCCCCCAGCTGTCCC+TGG + Chr4:56771281-56771300 MsG0480021331.01.T01:CDS 60.0%
AGTGAGGCTTGATGGAGCGG+TGG - Chr4:56769231-56769250 None:intergenic 60.0%
CAAGAGCAGAGGGACCGTTG+GGG - Chr4:56770719-56770738 None:intergenic 60.0%
CCCAGCTGTCCCTGGTATCA+TGG + Chr4:56771289-56771308 MsG0480021331.01.T01:CDS 60.0%
GCAAGAGCAGAGGGACCGTT+GGG - Chr4:56770720-56770739 None:intergenic 60.0%
GCAGTCAAGGAAGCAGCCTG+GGG + Chr4:56770738-56770757 MsG0480021331.01.T01:CDS 60.0%
GCCCCCCCATGTCTTCAATG+CGG - Chr4:56771581-56771600 None:intergenic 60.0%
GGGCCGCATAGAGAACGTTC+AGG + Chr4:56771597-56771616 MsG0480021331.01.T01:CDS 60.0%
GGTGGGGTTGCATCGTACAG+AGG - Chr4:56769213-56769232 None:intergenic 60.0%
GTGAGGCTTGATGGAGCGGT+GGG - Chr4:56769230-56769249 None:intergenic 60.0%
TGAGGCTTGATGGAGCGGTG+GGG - Chr4:56769229-56769248 None:intergenic 60.0%
TGCAAGAGCAGAGGGACCGT+TGG - Chr4:56770721-56770740 None:intergenic 60.0%
TGGCGAAACGAGCACCTTGC+TGG - Chr4:56770541-56770560 None:intergenic 60.0%
!! TAGGGTTTGGTGCCCCTTGC+TGG + Chr4:56770452-56770471 MsG0480021331.01.T01:intron 60.0%
AGCGTAACGAGCCAGACCCC+AGG - Chr4:56770757-56770776 None:intergenic 65.0%
CAAGGAAGCAGCCTGGGGTC+TGG + Chr4:56770743-56770762 MsG0480021331.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56768768 56771980 56768768 ID=MsG0480021331.01;Name=MsG0480021331.01
Chr4 mRNA 56768768 56771980 56768768 ID=MsG0480021331.01.T01;Parent=MsG0480021331.01;Name=MsG0480021331.01.T01;_AED=0.47;_eAED=0.47;_QI=328|1|1|1|0.83|0.71|7|236|398
Chr4 exon 56768768 56768802 56768768 ID=MsG0480021331.01.T01:exon:6460;Parent=MsG0480021331.01.T01
Chr4 exon 56768823 56769292 56768823 ID=MsG0480021331.01.T01:exon:6461;Parent=MsG0480021331.01.T01
Chr4 exon 56769993 56770262 56769993 ID=MsG0480021331.01.T01:exon:6462;Parent=MsG0480021331.01.T01
Chr4 exon 56770455 56770564 56770455 ID=MsG0480021331.01.T01:exon:6463;Parent=MsG0480021331.01.T01
Chr4 exon 56770698 56770788 56770698 ID=MsG0480021331.01.T01:exon:6464;Parent=MsG0480021331.01.T01
Chr4 exon 56771041 56771310 56771041 ID=MsG0480021331.01.T01:exon:6465;Parent=MsG0480021331.01.T01
Chr4 exon 56771466 56771980 56771466 ID=MsG0480021331.01.T01:exon:6466;Parent=MsG0480021331.01.T01
Chr4 five_prime_UTR 56768768 56768802 56768768 ID=MsG0480021331.01.T01:five_prime_utr;Parent=MsG0480021331.01.T01
Chr4 five_prime_UTR 56768823 56769115 56768823 ID=MsG0480021331.01.T01:five_prime_utr;Parent=MsG0480021331.01.T01
Chr4 CDS 56769116 56769292 56769116 ID=MsG0480021331.01.T01:cds;Parent=MsG0480021331.01.T01
Chr4 CDS 56769993 56770262 56769993 ID=MsG0480021331.01.T01:cds;Parent=MsG0480021331.01.T01
Chr4 CDS 56770455 56770564 56770455 ID=MsG0480021331.01.T01:cds;Parent=MsG0480021331.01.T01
Chr4 CDS 56770698 56770788 56770698 ID=MsG0480021331.01.T01:cds;Parent=MsG0480021331.01.T01
Chr4 CDS 56771041 56771310 56771041 ID=MsG0480021331.01.T01:cds;Parent=MsG0480021331.01.T01
Chr4 CDS 56771466 56771744 56771466 ID=MsG0480021331.01.T01:cds;Parent=MsG0480021331.01.T01
Chr4 three_prime_UTR 56771745 56771980 56771745 ID=MsG0480021331.01.T01:three_prime_utr;Parent=MsG0480021331.01.T01
Gene Sequence

>MsG0480021331.01.T01

ATGGCCTCTGCATCAGCATCTCTTTTCAAGTCGTCGATTGTTCTTGACAAGTCTGAATGGGTGAAGGGCCAAACCCTCCGTCAATCTTCTGTATCCTCTGTACGATGCAACCCCACCGCTCCATCAAGCCTCACTATCAGAGCTGGTTCCTATGCCGATGAGCTCGTTAAGACCGCGAAAACAATTGCTTCACCAGGACGTGGTATTTTGGCCATGGATGAGTCCAATGCTACTTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGCCAAGCATGGCGTACTCTTCTGGTGACAGTTCCATCTCTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTCTACCAATCCACAACAGATGGAAGGAAGATTGTCGATGTACTTATCGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTAGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTTGCAGTCAAGGAAGCAGCCTGGGGTCTGGCTCGTTACGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACTCCAGGAGCTGAGTGCAAGGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATATGCAAGGGCTCTCCAAAACACCGCATTGAAGACATGGGGGGGCCGCATAGAGAACGTTCAGGCAGCACAAGAAGCACTCCTTTTCCGTGCTAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTCAAAGGATACTCTTATTAA

Protein sequence

>MsG0480021331.01.T01

MASASASLFKSSIVLDKSEWVKGQTLRQSSVSSVRCNPTAPSSLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPSLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRIENVQAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*