AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047318.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047318.01.T01 MTR_4g124790 67.005 197 41 2 3 178 15 208 1.61e-81 241
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047318.01.T01 AT3G26060 53.801 171 53 2 29 178 39 204 3.16e-52 166
MsG0880047318.01.T01 AT3G26060 59.854 137 34 1 63 178 5 141 7.31e-52 163
MsG0880047318.01.T01 AT3G26060 58.824 136 35 1 64 178 68 203 3.25e-50 161

Find 41 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCACTCAACAAGGTAAA+TGG 0.285138 8:-84600128 None:intergenic
CACAGGTTTCCCTTTGTACT+TGG 0.303836 8:-84598631 None:intergenic
GGAGTGCCTGGCGATTTCTT+TGG 0.309530 8:+84600176 MsG0880047318.01.T01:CDS
AAATGGAAGCTTGTACTTCT+TGG 0.312396 8:-84600111 None:intergenic
GATTTCTTTGGATCATTGCC+TGG 0.346798 8:+84600188 MsG0880047318.01.T01:CDS
AATTGGTAGGGAGAGTGATC+AGG 0.403984 8:-84598295 None:intergenic
AGACTCACTGTCTTGCCATC+TGG 0.410957 8:-84598606 None:intergenic
CCTACTCTGTTGGTACAGCC+AGG 0.417890 8:-84598684 None:intergenic
GTGTAGAAGAAAGTGTGTTT+TGG 0.421938 8:-84598425 None:intergenic
CAGCCAGGGGTCTCATCAGC+AGG 0.442678 8:-84598669 None:intergenic
AGGAAAGAGTGGGGAGTGCC+TGG 0.465381 8:+84600164 MsG0880047318.01.T01:CDS
ACACCTTCTTCATTCAAAAG+AGG 0.479717 8:+84598444 MsG0880047318.01.T01:CDS
TACCCTGCTGATGAGACCCC+TGG 0.490152 8:+84598666 MsG0880047318.01.T01:CDS
CTACTCTGTTGGTACAGCCA+GGG 0.512914 8:-84598683 None:intergenic
TGGTCTTTCAACGTGAAAGC+CGG 0.523289 8:-84598586 None:intergenic
TGAGTCTCTCCAAGTACAAA+GGG 0.527088 8:+84598622 MsG0880047318.01.T01:CDS
AGTAAAGGTTCAAAGCCAAC+CGG 0.532250 8:+84598567 MsG0880047318.01.T01:CDS
TTTACCTTGTTGAGTGATGA+GGG 0.533791 8:+84600131 MsG0880047318.01.T01:CDS
ATTTACCTTGTTGAGTGATG+AGG 0.534596 8:+84600130 MsG0880047318.01.T01:CDS
GGCAATGAGCAGGTGAGTAA+AGG 0.534774 8:+84598552 MsG0880047318.01.T01:intron
ATGAAATGTGGGGAAAGAAT+TGG 0.539656 8:-84598312 None:intergenic
AATGATCCAAAGAAATCGCC+AGG 0.551351 8:-84600182 None:intergenic
ATTTCTTTGGATCATTGCCT+GGG 0.553738 8:+84600189 MsG0880047318.01.T01:CDS
TAACAAGGTAAGGAAAGAGT+GGG 0.554128 8:+84600154 MsG0880047318.01.T01:CDS
CTTTCAACGTGAAAGCCGGT+TGG 0.556167 8:-84598582 None:intergenic
GTGATGAGGGTAACAAGGTA+AGG 0.567983 8:+84600144 MsG0880047318.01.T01:CDS
TACTCTGTTGGTACAGCCAG+GGG 0.569289 8:-84598682 None:intergenic
ATGTGGGGAAAGAATTGGTA+GGG 0.588359 8:-84598307 None:intergenic
GTAACAAGGTAAGGAAAGAG+TGG 0.594096 8:+84600153 MsG0880047318.01.T01:CDS
GTGAGTCTCTCCAAGTACAA+AGG 0.604417 8:+84598621 MsG0880047318.01.T01:CDS
AGAACATAAGTCTCTCTCCC+AGG 0.610669 8:-84600206 None:intergenic
GTTGAGTGATGAGGGTAACA+AGG 0.618582 8:+84600139 MsG0880047318.01.T01:CDS
CCTGGCTGTACCAACAGAGT+AGG 0.622371 8:+84598684 MsG0880047318.01.T01:CDS
TGGAAGAATGGGATAACTTG+AGG 0.628287 8:-84598394 None:intergenic
TTTCACGTTGAAAGACCAGA+TGG 0.642154 8:+84598591 MsG0880047318.01.T01:CDS
AACAAGGTAAGGAAAGAGTG+GGG 0.648925 8:+84600155 MsG0880047318.01.T01:CDS
AATGTGGGGAAAGAATTGGT+AGG 0.655415 8:-84598308 None:intergenic
AGCCAGGGGTCTCATCAGCA+GGG 0.668167 8:-84598668 None:intergenic
GTTACCCTCATCACTCAACA+AGG 0.674521 8:-84600135 None:intergenic
GGGTAGAATAAACAACACAC+AGG 0.724161 8:-84598648 None:intergenic
TTTGAGGTGAATGAAATGTG+GGG 0.736247 8:-84598322 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTGTTTACCTAAAT+AGG + Chr8:84599482-84599501 MsG0880047318.01.T01:intron 15.0%
!! AATAATCAGTAGATAAATAT+TGG - Chr8:84599778-84599797 None:intergenic 15.0%
!! TCTAAGTTTATAATCATAAA+TGG + Chr8:84598745-84598764 MsG0880047318.01.T01:intron 15.0%
!!! TTTTATGAATTTATTATTGC+AGG + Chr8:84599927-84599946 MsG0880047318.01.T01:intron 15.0%
!! ATGATATAATTGATCCAATA+TGG + Chr8:84599843-84599862 MsG0880047318.01.T01:intron 20.0%
!!! TTCATAACTACTTTTGTAAT+AGG + Chr8:84599058-84599077 MsG0880047318.01.T01:intron 20.0%
! AAAAACACCCTGTTTAAAAA+CGG - Chr8:84599535-84599554 None:intergenic 25.0%
! AACCATGCAACAATAAATTT+GGG + Chr8:84599273-84599292 MsG0880047318.01.T01:intron 25.0%
! ACTTATGTTCTTGACAAAAA+TGG + Chr8:84600218-84600237 MsG0880047318.01.T01:CDS 25.0%
! ATGAATCAATAGATCATAGT+TGG + Chr8:84599387-84599406 MsG0880047318.01.T01:intron 25.0%
! CCAAAAAATAGAGAATTGAA+TGG - Chr8:84598374-84598393 None:intergenic 25.0%
! GCAAATACTTGATATAGTTA+AGG + Chr8:84599898-84599917 MsG0880047318.01.T01:intron 25.0%
! TAACTAATTAACTTCCCAAA+AGG - Chr8:84598988-84599007 None:intergenic 25.0%
! TAATTGATCCAATATGGTAA+AGG + Chr8:84599849-84599868 MsG0880047318.01.T01:intron 25.0%
! TTATGTTAGATTGTTAGAGT+TGG + Chr8:84598823-84598842 MsG0880047318.01.T01:intron 25.0%
!! AAAATTAAGTCAGTGCTATT+AGG + Chr8:84599343-84599362 MsG0880047318.01.T01:intron 25.0%
!! AAATTAAGTCAGTGCTATTA+GGG + Chr8:84599344-84599363 MsG0880047318.01.T01:intron 25.0%
!! ATTTTTGTTCTCTAGTGAAA+AGG + Chr8:84598774-84598793 MsG0880047318.01.T01:intron 25.0%
!! TTTTTGTTCTCTAGTGAAAA+GGG + Chr8:84598775-84598794 MsG0880047318.01.T01:intron 25.0%
!!! AATTTGTTGGTTAAGTTAGT+CGG + Chr8:84599017-84599036 MsG0880047318.01.T01:intron 25.0%
!!! CCATTCAATTCTCTATTTTT+TGG + Chr8:84598371-84598390 MsG0880047318.01.T01:CDS 25.0%
!!! TAAAGCAATTCTAAAATGTG+TGG - Chr8:84599714-84599733 None:intergenic 25.0%
!!! TTTTGGGAAGTTAATTAGTT+AGG + Chr8:84598987-84599006 MsG0880047318.01.T01:intron 25.0%
AAGACTAATATTCTGGGTAA+TGG - Chr8:84599245-84599264 None:intergenic 30.0%
AATATTCATTGTCATTGCAC+CGG - Chr8:84599447-84599466 None:intergenic 30.0%
ACAATACTGTTAGGAATTAG+AGG - Chr8:84599811-84599830 None:intergenic 30.0%
ACATATGTACAAGACTTTCA+AGG - Chr8:84599191-84599210 None:intergenic 30.0%
AGATAGCAAGACTAATATTC+TGG - Chr8:84599252-84599271 None:intergenic 30.0%
ATTGTTTACCTAAATAGGAC+AGG + Chr8:84599487-84599506 MsG0880047318.01.T01:intron 30.0%
CAACCATGCAACAATAAATT+TGG + Chr8:84599272-84599291 MsG0880047318.01.T01:intron 30.0%
CCTAACAGTATTGTTTATGA+AGG + Chr8:84599817-84599836 MsG0880047318.01.T01:intron 30.0%
CCTTCATAAACAATACTGTT+AGG - Chr8:84599820-84599839 None:intergenic 30.0%
GAGAAATGAAATATTGCAGA+AGG - Chr8:84599692-84599711 None:intergenic 30.0%
GATAGCAAGACTAATATTCT+GGG - Chr8:84599251-84599270 None:intergenic 30.0%
GCAATGCATGGTTAATTAAT+TGG - Chr8:84600073-84600092 None:intergenic 30.0%
TCATATAAAGTTCAAGAAGC+AGG + Chr8:84599967-84599986 MsG0880047318.01.T01:intron 30.0%
TTGCCATTAAATTCAAATGC+AGG - Chr8:84598537-84598556 None:intergenic 30.0%
TTGTTTACCTAAATAGGACA+GGG + Chr8:84599488-84599507 MsG0880047318.01.T01:intron 30.0%
! AAACCTCTTTTGAATGAAGA+AGG - Chr8:84598450-84598469 None:intergenic 30.0%
! TATTGTGTGAATAAAGTACC+TGG - Chr8:84598481-84598500 None:intergenic 30.0%
! TGTTAGAGTTGGTTAGTATT+TGG + Chr8:84598834-84598853 MsG0880047318.01.T01:intron 30.0%
!! AGTGATGATGATATGTTTTG+AGG - Chr8:84598341-84598360 None:intergenic 30.0%
!! AGTTGGTAATATGTTGGTTT+AGG + Chr8:84599404-84599423 MsG0880047318.01.T01:intron 30.0%
!! GATCATAGTTGGTAATATGT+TGG + Chr8:84599398-84599417 MsG0880047318.01.T01:intron 30.0%
!!! AAGAAAGTGTGTTTTGGTTT+TGG - Chr8:84598422-84598441 None:intergenic 30.0%
!!! TTTTGAGGTGAATGAAATGT+GGG - Chr8:84598326-84598345 None:intergenic 30.0%
AAATGGAAGCTTGTACTTCT+TGG - Chr8:84600114-84600133 None:intergenic 35.0%
AATTGAGAACTCTTCTCATG+TGG - Chr8:84599751-84599770 None:intergenic 35.0%
ACACCTTCTTCATTCAAAAG+AGG + Chr8:84598444-84598463 MsG0880047318.01.T01:CDS 35.0%
ATGAAATGTGGGGAAAGAAT+TGG - Chr8:84598315-84598334 None:intergenic 35.0%
ATTCCATGCCTTTACCATAT+TGG - Chr8:84599860-84599879 None:intergenic 35.0%
ATTTACCTTGTTGAGTGATG+AGG + Chr8:84600130-84600149 MsG0880047318.01.T01:CDS 35.0%
ATTTCTTTGGATCATTGCCT+GGG + Chr8:84600189-84600208 MsG0880047318.01.T01:CDS 35.0%
CACTCTTTCATCTCTTTACA+AGG - Chr8:84599107-84599126 None:intergenic 35.0%
CCACCTGCATTTGAATTTAA+TGG + Chr8:84598531-84598550 MsG0880047318.01.T01:intron 35.0%
CCATTAAATTCAAATGCAGG+TGG - Chr8:84598534-84598553 None:intergenic 35.0%
GAAAAGGCTTCAAGCATTAT+CGG - Chr8:84599566-84599585 None:intergenic 35.0%
GCATTACTGCTAAGATATTG+TGG - Chr8:84599321-84599340 None:intergenic 35.0%
GTCCCAAATTTATTGTTGCA+TGG - Chr8:84599278-84599297 None:intergenic 35.0%
TAACAAGGTAAGGAAAGAGT+GGG + Chr8:84600154-84600173 MsG0880047318.01.T01:CDS 35.0%
TAATTCTGATGCGACTATAG+TGG + Chr8:84598933-84598952 MsG0880047318.01.T01:intron 35.0%
TCATCACTCAACAAGGTAAA+TGG - Chr8:84600131-84600150 None:intergenic 35.0%
TGAATTTAATGGCAATGAGC+AGG + Chr8:84598542-84598561 MsG0880047318.01.T01:intron 35.0%
TGTACAAGACTTTCAAGGAA+AGG - Chr8:84599186-84599205 None:intergenic 35.0%
TTTACCTTGTTGAGTGATGA+GGG + Chr8:84600131-84600150 MsG0880047318.01.T01:CDS 35.0%
! ATAATGCTTGAAGCCTTTTC+AGG + Chr8:84599566-84599585 MsG0880047318.01.T01:intron 35.0%
! GAGTTGGTTAGTATTTGGAA+TGG + Chr8:84598839-84598858 MsG0880047318.01.T01:intron 35.0%
! TGGTTAGTATTTGGAATGGA+TGG + Chr8:84598843-84598862 MsG0880047318.01.T01:intron 35.0%
! TTTGAGGTGAATGAAATGTG+GGG - Chr8:84598325-84598344 None:intergenic 35.0%
!! AAAGAGGTTTCATTTTTGCC+AGG + Chr8:84598460-84598479 MsG0880047318.01.T01:CDS 35.0%
!! GTGTAGAAGAAAGTGTGTTT+TGG - Chr8:84598428-84598447 None:intergenic 35.0%
!! TCATCGATATGCTTTTAGGT+TGG - Chr8:84600274-84600293 None:intergenic 35.0%
!!! AGTGTGTTTTGGTTTTGGAA+TGG - Chr8:84598417-84598436 None:intergenic 35.0%
!!! GTTTTGAGGTGAATGAAATG+TGG - Chr8:84598327-84598346 None:intergenic 35.0%
!!! TGGTTTTGGAATGGAAGAAT+GGG - Chr8:84598408-84598427 None:intergenic 35.0%
!!! TTGGTTTTGGAATGGAAGAA+TGG - Chr8:84598409-84598428 None:intergenic 35.0%
AACAAGGTAAGGAAAGAGTG+GGG + Chr8:84600155-84600174 MsG0880047318.01.T01:CDS 40.0%
AATGATCCAAAGAAATCGCC+AGG - Chr8:84600185-84600204 None:intergenic 40.0%
AATGTGGGGAAAGAATTGGT+AGG - Chr8:84598311-84598330 None:intergenic 40.0%
ACCCTACAAAGCTGTAAAAC+AGG - Chr8:84599600-84599619 None:intergenic 40.0%
AGTAAAGGTTCAAAGCCAAC+CGG + Chr8:84598567-84598586 MsG0880047318.01.T01:CDS 40.0%
AGTGAAAAGGGAAAGGTGAA+TGG + Chr8:84598787-84598806 MsG0880047318.01.T01:intron 40.0%
ATGTGGGGAAAGAATTGGTA+GGG - Chr8:84598310-84598329 None:intergenic 40.0%
CCATGCATTGCATGAAATGT+AGG + Chr8:84600082-84600101 MsG0880047318.01.T01:intron 40.0%
CCTACATTTCATGCAATGCA+TGG - Chr8:84600085-84600104 None:intergenic 40.0%
GATCCAATATGGTAAAGGCA+TGG + Chr8:84599854-84599873 MsG0880047318.01.T01:intron 40.0%
GATTTCTTTGGATCATTGCC+TGG + Chr8:84600188-84600207 MsG0880047318.01.T01:CDS 40.0%
GGGTAGAATAAACAACACAC+AGG - Chr8:84598651-84598670 None:intergenic 40.0%
GTAACAAGGTAAGGAAAGAG+TGG + Chr8:84600153-84600172 MsG0880047318.01.T01:CDS 40.0%
GTTAGGTCTCGTCAATTTGT+TGG + Chr8:84599004-84599023 MsG0880047318.01.T01:intron 40.0%
GTTCTCTAGTGAAAAGGGAA+AGG + Chr8:84598780-84598799 MsG0880047318.01.T01:intron 40.0%
TACCTAAATAGGACAGGGAT+CGG + Chr8:84599493-84599512 MsG0880047318.01.T01:intron 40.0%
TACTTCCCTTGTGTTAGTTC+TGG + Chr8:84598958-84598977 MsG0880047318.01.T01:intron 40.0%
TCCTCTCACAAGGTAAAACT+TGG + Chr8:84600023-84600042 MsG0880047318.01.T01:intron 40.0%
TGAGTCTCTCCAAGTACAAA+GGG + Chr8:84598622-84598641 MsG0880047318.01.T01:CDS 40.0%
TGGAAGAATGGGATAACTTG+AGG - Chr8:84598397-84598416 None:intergenic 40.0%
TTTAGGCACAAGAGTCAATG+TGG + Chr8:84599421-84599440 MsG0880047318.01.T01:intron 40.0%
TTTCACGTTGAAAGACCAGA+TGG + Chr8:84598591-84598610 MsG0880047318.01.T01:CDS 40.0%
! ATATGAATCCCTAAAAGCGC+AGG - Chr8:84599953-84599972 None:intergenic 40.0%
! GGTCTCATCGATATGCTTTT+AGG - Chr8:84600278-84600297 None:intergenic 40.0%
! TCCAAGTTTTACCTTGTGAG+AGG - Chr8:84600027-84600046 None:intergenic 40.0%
! TGGGTAATGGCTGTTTGTTA+GGG - Chr8:84599232-84599251 None:intergenic 40.0%
!! AGCCTGTTTTACAGCTTTGT+AGG + Chr8:84599595-84599614 MsG0880047318.01.T01:intron 40.0%
!! GCCTGTTTTACAGCTTTGTA+GGG + Chr8:84599596-84599615 MsG0880047318.01.T01:intron 40.0%
!!! GCTTTTTTCTCCTACTCTGT+TGG - Chr8:84598697-84598716 None:intergenic 40.0%
!!! TAGAGCGCCGTTTTTAAACA+GGG + Chr8:84599525-84599544 MsG0880047318.01.T01:intron 40.0%
!!! TTAGAGCGCCGTTTTTAAAC+AGG + Chr8:84599524-84599543 MsG0880047318.01.T01:intron 40.0%
!!! TTAGTTCTGGCAGACCTTTT+GGG + Chr8:84598971-84598990 MsG0880047318.01.T01:intron 40.0%
AAGCTGTAAAACAGGCTACC+CGG - Chr8:84599592-84599611 None:intergenic 45.0%
AATTGGTAGGGAGAGTGATC+AGG - Chr8:84598298-84598317 None:intergenic 45.0%
AGAACATAAGTCTCTCTCCC+AGG - Chr8:84600209-84600228 None:intergenic 45.0%
AGACGATTCTTCCTCTCACA+AGG + Chr8:84600013-84600032 MsG0880047318.01.T01:intron 45.0%
AGCAGAGTTGTTGGGATAAG+TGG + Chr8:84599990-84600009 MsG0880047318.01.T01:intron 45.0%
AGGCTTCAAGCATTATCGGA+CGG - Chr8:84599562-84599581 None:intergenic 45.0%
CACAGGTTTCCCTTTGTACT+TGG - Chr8:84598634-84598653 None:intergenic 45.0%
CTTTGTAGGGTCAACAACCT+CGG + Chr8:84599609-84599628 MsG0880047318.01.T01:intron 45.0%
GACTTGATGTGCAGTTACTG+TGG + Chr8:84599295-84599314 MsG0880047318.01.T01:intron 45.0%
GTCTGCCAGAACTAACACAA+GGG - Chr8:84598966-84598985 None:intergenic 45.0%
GTGAGTCTCTCCAAGTACAA+AGG + Chr8:84598621-84598640 MsG0880047318.01.T01:CDS 45.0%
GTGATGAGGGTAACAAGGTA+AGG + Chr8:84600144-84600163 MsG0880047318.01.T01:CDS 45.0%
GTTACCCTCATCACTCAACA+AGG - Chr8:84600138-84600157 None:intergenic 45.0%
GTTGAGTGATGAGGGTAACA+AGG + Chr8:84600139-84600158 MsG0880047318.01.T01:CDS 45.0%
TACCGATCCCTGTCCTATTT+AGG - Chr8:84599498-84599517 None:intergenic 45.0%
TGGTCTTTCAACGTGAAAGC+CGG - Chr8:84598589-84598608 None:intergenic 45.0%
! CTGGGTAATGGCTGTTTGTT+AGG - Chr8:84599233-84599252 None:intergenic 45.0%
!!! GTTAGTTCTGGCAGACCTTT+TGG + Chr8:84598970-84598989 MsG0880047318.01.T01:intron 45.0%
AGAAGCAGGAGCAGAGTTGT+TGG + Chr8:84599981-84600000 MsG0880047318.01.T01:intron 50.0%
AGACTCACTGTCTTGCCATC+TGG - Chr8:84598609-84598628 None:intergenic 50.0%
CTACTCTGTTGGTACAGCCA+GGG - Chr8:84598686-84598705 None:intergenic 50.0%
CTTTCAACGTGAAAGCCGGT+TGG - Chr8:84598585-84598604 None:intergenic 50.0%
GAAGCAGGAGCAGAGTTGTT+GGG + Chr8:84599982-84600001 MsG0880047318.01.T01:intron 50.0%
GATCTTCTACATCCTCACCG+AGG - Chr8:84599629-84599648 None:intergenic 50.0%
GCTTCAAGCATTATCGGACG+GGG - Chr8:84599560-84599579 None:intergenic 50.0%
GGCAATGAGCAGGTGAGTAA+AGG + Chr8:84598552-84598571 MsG0880047318.01.T01:intron 50.0%
GGCTTCAAGCATTATCGGAC+GGG - Chr8:84599561-84599580 None:intergenic 50.0%
GGTCTGCCAGAACTAACACA+AGG - Chr8:84598967-84598986 None:intergenic 50.0%
TACTCTGTTGGTACAGCCAG+GGG - Chr8:84598685-84598704 None:intergenic 50.0%
! ATTGCAGGCCTGCGCTTTTA+GGG + Chr8:84599942-84599961 MsG0880047318.01.T01:intron 50.0%
! TATTGCAGGCCTGCGCTTTT+AGG + Chr8:84599941-84599960 MsG0880047318.01.T01:intron 50.0%
!! TGCTTGAAGCCTTTTCAGGC+CGG + Chr8:84599570-84599589 MsG0880047318.01.T01:intron 50.0%
CCTACTCTGTTGGTACAGCC+AGG - Chr8:84598687-84598706 None:intergenic 55.0%
CCTGGCTGTACCAACAGAGT+AGG + Chr8:84598684-84598703 MsG0880047318.01.T01:CDS 55.0%
GGCACAAGAGTCAATGTGGC+CGG + Chr8:84599425-84599444 MsG0880047318.01.T01:intron 55.0%
TAGGGTCAACAACCTCGGTG+AGG + Chr8:84599614-84599633 MsG0880047318.01.T01:intron 55.0%
! GGAGTGCCTGGCGATTTCTT+TGG + Chr8:84600176-84600195 MsG0880047318.01.T01:CDS 55.0%
!! GCTTGAAGCCTTTTCAGGCC+GGG + Chr8:84599571-84599590 MsG0880047318.01.T01:intron 55.0%
ACAGGCTACCCGGCCTGAAA+AGG - Chr8:84599582-84599601 None:intergenic 60.0%
AGCCAGGGGTCTCATCAGCA+GGG - Chr8:84598671-84598690 None:intergenic 60.0%
TACCCTGCTGATGAGACCCC+TGG + Chr8:84598666-84598685 MsG0880047318.01.T01:CDS 60.0%
!! AGGAAAGAGTGGGGAGTGCC+TGG + Chr8:84600164-84600183 MsG0880047318.01.T01:CDS 60.0%
CAGCCAGGGGTCTCATCAGC+AGG - Chr8:84598672-84598691 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 84598293 84600301 84598293 ID=MsG0880047318.01;Name=MsG0880047318.01
Chr8 mRNA 84598293 84600301 84598293 ID=MsG0880047318.01.T01;Parent=MsG0880047318.01;Name=MsG0880047318.01.T01;_AED=0.50;_eAED=0.59;_QI=0|0|0|1|0|0.33|3|0|184
Chr8 exon 84598293 84598481 84598293 ID=MsG0880047318.01.T01:exon:9936;Parent=MsG0880047318.01.T01
Chr8 exon 84598561 84598728 84598561 ID=MsG0880047318.01.T01:exon:9937;Parent=MsG0880047318.01.T01
Chr8 exon 84600104 84600301 84600104 ID=MsG0880047318.01.T01:exon:9938;Parent=MsG0880047318.01.T01
Chr8 CDS 84598293 84598481 84598293 ID=MsG0880047318.01.T01:cds;Parent=MsG0880047318.01.T01
Chr8 CDS 84598561 84598728 84598561 ID=MsG0880047318.01.T01:cds;Parent=MsG0880047318.01.T01
Chr8 CDS 84600104 84600301 84600104 ID=MsG0880047318.01.T01:cds;Parent=MsG0880047318.01.T01
Gene Sequence

>MsG0880047318.01.T01

TTCCTGATCACTCTCCCTACCAATTCTTTCCCCACATTTCATTCACCTCAAAACATATCATCATCACTTACTTCTACTCCATTCAATTCTCTATTTTTTGGCCTCAAGTTATCCCATTCTTCCATTCCAAAACCAAAACACACTTTCTTCTACACCTTCTTCATTCAAAAGAGGTTTCATTTTTGCCAGCAGGTGAGTAAAGGTTCAAAGCCAACCGGCTTTCACGTTGAAAGACCAGATGGCAAGACAGTGAGTCTCTCCAAGTACAAAGGGAAACCTGTGTGTTGTTTATTCTACCCTGCTGATGAGACCCCTGGCTGTACCAACAGAGTAGGAGAAAAAAGCATGTATTCTAGTGCATTTGCCAAGAAGTACAAGCTTCCATTTACCTTGTTGAGTGATGAGGGTAACAAGGTAAGGAAAGAGTGGGGAGTGCCTGGCGATTTCTTTGGATCATTGCCTGGGAGAGAGACTTATGTTCTTGACAAAAATGGTGTCGTTCAGCTTGTATACAACAATCAGTTCCAACCTAAAAGCATATCGATGAGACCTTGA

Protein sequence

>MsG0880047318.01.T01

FLITLPTNSFPTFHSPQNISSSLTSTPFNSLFFGLKLSHSSIPKPKHTFFYTFFIQKRFHFCQQVSKGSKPTGFHVERPDGKTVSLSKYKGKPVCCLFYPADETPGCTNRVGEKSMYSSAFAKKYKLPFTLLSDEGNKVRKEWGVPGDFFGSLPGRETYVLDKNGVVQLVYNNQFQPKSISMRP*