AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011647.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011647.01.T01 MTR_3g007760 90.924 606 12 2 1 580 1 589 0.0 1107
MsG0380011647.01.T01 MTR_3g007760 94.810 501 9 1 80 580 83 566 0.0 971
MsG0380011647.01.T01 MTR_5g007710 29.758 289 159 9 91 371 93 345 1.34e-27 117
MsG0380011647.01.T01 MTR_5g007710 29.054 296 166 9 84 371 86 345 1.99e-27 115
MsG0380011647.01.T01 MTR_4g077800 28.395 324 179 10 91 396 93 381 5.26e-23 103
MsG0380011647.01.T01 MTR_4g077800 27.864 323 182 10 91 396 93 381 1.03e-22 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011647.01.T01 AT4G25230 63.036 606 170 6 1 580 1 578 0.0 764
MsG0380011647.01.T01 AT4G25230 63.036 606 170 6 1 580 1 578 0.0 764
MsG0380011647.01.T01 AT4G25230 63.036 606 170 6 1 580 1 578 0.0 764
MsG0380011647.01.T01 AT5G51450 61.551 606 178 7 1 580 1 577 0.0 716
MsG0380011647.01.T01 AT5G51450 60.096 624 176 8 1 580 1 595 0.0 704
MsG0380011647.01.T01 AT1G65040 28.013 307 166 9 71 371 17 274 4.56e-27 114
MsG0380011647.01.T01 AT1G65040 27.273 297 170 9 84 371 86 345 1.59e-26 113
MsG0380011647.01.T01 AT3G16090 28.472 288 164 8 91 371 93 345 2.19e-25 110
MsG0380011647.01.T01 AT1G65040 27.757 263 126 8 114 371 1 204 3.87e-21 95.1
MsG0380011647.01.T01 AT1G65040 25.676 296 153 9 84 371 86 322 9.41e-21 95.5
MsG0380011647.01.T01 AT1G65040 35.976 164 83 6 213 371 20 166 1.74e-20 92.4
MsG0380011647.01.T01 AT1G65040 35.976 164 83 6 213 371 46 192 4.53e-20 90.5

Find 168 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGTATCTTATTTCTTT+TGG 0.143623 3:+2979471 MsG0380011647.01.T01:intron
ACTCAGGTTGGTTGCATTCT+TGG 0.164820 3:+2983597 MsG0380011647.01.T01:CDS
TATAACTGTAGGTTCTTTAT+TGG 0.205185 3:+2982343 MsG0380011647.01.T01:intron
CAACCTTTGATGATGCTTCT+TGG 0.213908 3:+2983735 MsG0380011647.01.T01:CDS
AAAGAAAGACTATTTATATC+TGG 0.242098 3:-2978405 None:intergenic
CTTAAATCAGATGGACTAAT+TGG 0.254906 3:+2979763 MsG0380011647.01.T01:CDS
CCCTTTGTCCATCATTAATA+TGG 0.260037 3:-2979576 None:intergenic
GGCCGTACTTTGTTCTTTAA+AGG 0.264896 3:+2981280 MsG0380011647.01.T01:CDS
CACTTTATCAAGCAGGTCTT+TGG 0.274479 3:+2981246 MsG0380011647.01.T01:CDS
GTTGCATTCTTGGCCAAATC+AGG 0.276468 3:+2983607 MsG0380011647.01.T01:CDS
TGTGAAGTTTATAGCAATTT+CGG 0.299921 3:+2979678 MsG0380011647.01.T01:CDS
ATGATGCTTCTTGGAACCTT+TGG 0.301147 3:+2983744 MsG0380011647.01.T01:CDS
ATATGAATTGCAGGCCATTT+TGG 0.312923 3:+2981905 MsG0380011647.01.T01:intron
GCAATGATAAACCGCATAAA+AGG 0.319003 3:+2982628 MsG0380011647.01.T01:CDS
TTTGCTAAATTATCATTTGC+AGG 0.328363 3:-2983881 None:intergenic
AACCTTAATAAAATCACATT+TGG 0.335502 3:-2984824 None:intergenic
CTTTAGATTCAATATATATC+AGG 0.342459 3:-2984737 None:intergenic
TGCATAGATGTTTCAAGCTC+TGG 0.346925 3:+2981403 MsG0380011647.01.T01:intron
TCTTTCTCTCTCTGTTGATT+CGG 0.351492 3:+2978455 MsG0380011647.01.T01:five_prime_UTR
GATTTCAGTTACTTGACATA+TGG 0.351948 3:+2981934 MsG0380011647.01.T01:CDS
TTGGTCATTACTTGTATATA+TGG 0.354551 3:+2982432 MsG0380011647.01.T01:CDS
AGCAATTTCGGCGGTTTCTA+CGG 0.359887 3:+2979690 MsG0380011647.01.T01:CDS
TGGCCAAATCAGGGTGTTGA+TGG 0.364216 3:+2983617 MsG0380011647.01.T01:CDS
GCATTGTTGAGTGTCGGATT+TGG 0.365198 3:-2983189 None:intergenic
CCATGACATTGAGTTACCTT+TGG 0.374744 3:+2979816 MsG0380011647.01.T01:CDS
GAAGCCTGAGAAGGATTAAT+AGG 0.380233 3:-2983767 None:intergenic
AAGAGAAAGAGAGAGAATTT+AGG 0.382097 3:-2978436 None:intergenic
GAAATGGTGGTTTACATATA+AGG 0.383514 3:+2983846 MsG0380011647.01.T01:CDS
GCTCCATCAACACCCTGATT+TGG 0.384253 3:-2983620 None:intergenic
TTGCTATGGCTGAGACTGTT+CGG 0.384425 3:+2983909 MsG0380011647.01.T01:CDS
TATCAAGCAGTTTAGTTGTT+CGG 0.384919 3:-2981989 None:intergenic
TTGTATATATGGCGGCTTCA+TGG 0.385653 3:+2982443 MsG0380011647.01.T01:CDS
CTGAAATCCATGCACCAAAA+TGG 0.388541 3:-2981919 None:intergenic
GAGGGTGAGGTAAGGAGCGT+TGG 0.393013 3:-2978504 None:intergenic
TTGGCCTATTAATCCTTCTC+AGG 0.395938 3:+2983763 MsG0380011647.01.T01:CDS
TGACATATGGATTCATCATT+CGG 0.402304 3:+2981947 MsG0380011647.01.T01:CDS
GATCGAATCCGGCACTCATT+TGG 0.409102 3:-2983125 None:intergenic
AGCTCTTCAGTGGTTGCATC+AGG 0.411339 3:-2982697 None:intergenic
AGGGTGAGGTAAGGAGCGTT+GGG 0.418128 3:-2978503 None:intergenic
TAAAAGGCTTTATTAGACTA+AGG 0.420440 3:+2982644 MsG0380011647.01.T01:CDS
TGCTATGGCTGAGACTGTTC+GGG 0.421473 3:+2983910 MsG0380011647.01.T01:CDS
CATGACATTGAGTTACCTTT+GGG 0.425509 3:+2979817 MsG0380011647.01.T01:CDS
GGAGGTTCTACCTCATATTC+CGG 0.432309 3:+2983931 MsG0380011647.01.T01:CDS
TCCGGACGACATAATATTCC+AGG 0.436173 3:+2983949 MsG0380011647.01.T01:CDS
CTTATCTAGGAGCGCAGGAC+TGG 0.436821 3:+2983574 MsG0380011647.01.T01:intron
AAGGCTCAAAGAAAAGTAAC+AGG 0.437902 3:-2981778 None:intergenic
GAAGGAGCGGTCGCCTGACT+TGG 0.439287 3:-2983800 None:intergenic
GGGAATACTTATCCGGAACT+TGG 0.439914 3:+2982373 MsG0380011647.01.T01:CDS
TCCACTGGTGTAAGACTGCC+AGG 0.452628 3:+2983821 MsG0380011647.01.T01:CDS
TTCCGCTAGTGGTCCAAGTC+AGG 0.453223 3:+2983787 MsG0380011647.01.T01:CDS
ATTTCATAAACTCTGCCCTC+TGG 0.457661 3:+2979536 MsG0380011647.01.T01:five_prime_UTR
TTGGGTTTGTATACCACCAT+AGG 0.461103 3:+2979835 MsG0380011647.01.T01:CDS
ACCTGGAATATTATGTCGTC+CGG 0.467248 3:-2983950 None:intergenic
GGGTTTCTGCAATTATCAAT+CGG 0.468555 3:-2978482 None:intergenic
AATCAGATGGACTAATTGGC+TGG 0.468773 3:+2979767 MsG0380011647.01.T01:CDS
AAGAAAGACTATTTATATCT+GGG 0.476596 3:-2978404 None:intergenic
AAGCAGGTCTTTGGTCAACT+TGG 0.476603 3:+2981255 MsG0380011647.01.T01:CDS
CTGTAGGTTCTTTATTGGAA+TGG 0.478929 3:+2982348 MsG0380011647.01.T01:intron
TGGCTGGAATTCAATTCACT+TGG 0.487314 3:+2979783 MsG0380011647.01.T01:CDS
AATGAAACAAACTCTAGTAC+AGG 0.490198 3:+2983072 MsG0380011647.01.T01:CDS
GTAAGACTGCCAGGAGGAAA+TGG 0.491286 3:+2983830 MsG0380011647.01.T01:CDS
AATGGAAGGGAATACTTATC+CGG 0.492575 3:+2982366 MsG0380011647.01.T01:CDS
TACATATAAGGACCGCTTCA+CGG 0.492827 3:+2983858 MsG0380011647.01.T01:CDS
CATCACTCAGCTACCCTCTC+AGG 0.493368 3:-2979497 None:intergenic
GCTGAAGTTATTATTAGTAA+TGG 0.494317 3:+2979654 MsG0380011647.01.T01:exon
ACAATGCCGAAGGTGTTCCT+TGG 0.494423 3:+2983205 MsG0380011647.01.T01:CDS
CAGGCGACCGCTCCTTCCAC+TGG 0.494953 3:+2983806 MsG0380011647.01.T01:CDS
TTGCTTATGACAGGAACCTA+TGG 0.496458 3:+2982831 MsG0380011647.01.T01:intron
AGCTCTGGCTAGAGATCGAT+TGG 0.496608 3:+2981418 MsG0380011647.01.T01:CDS
GCTATCAGAACAGTAGGTCT+CGG 0.496877 3:+2983656 MsG0380011647.01.T01:CDS
TTACCTCCAAGGAACACCTT+CGG 0.500316 3:-2983211 None:intergenic
TAGTGCTAACACCAATCTCC+TGG 0.500933 3:-2979626 None:intergenic
ACTCTGCCCTCTGGTTCCAT+TGG 0.501081 3:+2979545 MsG0380011647.01.T01:five_prime_UTR
ATCTTGCGTGTTTGAGATCG+TGG 0.507271 3:+2982890 MsG0380011647.01.T01:CDS
ATGTTGAACCATATTAATGA+TGG 0.509494 3:+2979568 MsG0380011647.01.T01:five_prime_UTR
CCTTCTCAGGCTTCCGCTAG+TGG 0.510241 3:+2983776 MsG0380011647.01.T01:CDS
TTGAAGTCAGATGAAAATCC+AGG 0.510577 3:+2979608 MsG0380011647.01.T01:five_prime_UTR
TATGTCCAGGGTGTGGCAGA+TGG 0.511444 3:-2981458 None:intergenic
ATTATGTCGTCCGGAATATG+AGG 0.511917 3:-2983941 None:intergenic
CCATATTAATGATGGACAAA+GGG 0.512209 3:+2979576 MsG0380011647.01.T01:five_prime_UTR
CAGATGAAAATCCAGGAGAT+TGG 0.514081 3:+2979615 MsG0380011647.01.T01:five_prime_UTR
AGGTTCTTTATTGGAATGGA+AGG 0.516889 3:+2982352 MsG0380011647.01.T01:intron
GTCATTACTTGTATATATGG+CGG 0.518434 3:+2982435 MsG0380011647.01.T01:CDS
ACTGTTCTGATAGCAGTAGA+TGG 0.518649 3:-2983647 None:intergenic
AAAAGTGGCTTTCGGCATGT+TGG 0.520638 3:-2983033 None:intergenic
TTGCATTCTTGGCCAAATCA+GGG 0.524173 3:+2983608 MsG0380011647.01.T01:CDS
GACAAGTATACATCTCAGTC+AGG 0.526090 3:-2983011 None:intergenic
TTAGAGAAACTTAAATCAGA+TGG 0.526158 3:+2979754 MsG0380011647.01.T01:CDS
TATTGCTTTCGAGACACTGC+AGG 0.527283 3:+2981805 MsG0380011647.01.T01:CDS
TACCTTTAAAGAACAAAGTA+CGG 0.531458 3:-2981282 None:intergenic
ATGCCGAAGGTGTTCCTTGG+AGG 0.534288 3:+2983208 MsG0380011647.01.T01:CDS
GGAATACTTATCCGGAACTT+GGG 0.534492 3:+2982374 MsG0380011647.01.T01:CDS
CTATCAGAACAGTAGGTCTC+GGG 0.534822 3:+2983657 MsG0380011647.01.T01:CDS
CCTTCGGCATTGTTGAGTGT+CGG 0.535969 3:-2983195 None:intergenic
CCCTCTTTCTAGATCGACTC+AGG 0.536632 3:+2978522 MsG0380011647.01.T01:five_prime_UTR
ATATCCTCTTAGCTCTTCAG+TGG 0.537382 3:-2982707 None:intergenic
ACGATCTCAAACACGCAAGA+TGG 0.539779 3:-2982888 None:intergenic
AGGTCTTTGGTCAACTTGGT+TGG 0.540663 3:+2981259 MsG0380011647.01.T01:CDS
TAATATGGTTCAACATCCAA+TGG 0.545197 3:-2979561 None:intergenic
TGGGTTTGTATACCACCATA+GGG 0.545778 3:+2979836 MsG0380011647.01.T01:CDS
TTTAGCAAATGTGCTTGCTA+TGG 0.545866 3:+2983895 MsG0380011647.01.T01:CDS
CCTTCTTAATCTTAGTCTCA+AGG 0.549610 3:+2979891 MsG0380011647.01.T01:CDS
TATATGGCGGCTTCATGGCA+TGG 0.551008 3:+2982448 MsG0380011647.01.T01:CDS
ATATACACGAAGATATGTCC+AGG 0.553719 3:-2981471 None:intergenic
ATTAGACTAAGGATAGCTCT+AGG 0.556983 3:+2982655 MsG0380011647.01.T01:CDS
ACAATTCGTCAATAACCCTA+TGG 0.557624 3:-2979851 None:intergenic
AGTGTTGGTGGCACAATCAG+TGG 0.557838 3:-2981227 None:intergenic
CTTGAAATATATAGCACACA+TGG 0.558537 3:+2981743 MsG0380011647.01.T01:CDS
TCTAGAAAGAGGGTGAGGTA+AGG 0.558730 3:-2978512 None:intergenic
CCTTGAGACTAAGATTAAGA+AGG 0.563725 3:-2979891 None:intergenic
ATGAGACATCTTGCATCTGT+CGG 0.563921 3:+2983695 MsG0380011647.01.T01:CDS
ACCATATTAATGATGGACAA+AGG 0.565998 3:+2979575 MsG0380011647.01.T01:five_prime_UTR
ACCTGAGTCGATCTAGAAAG+AGG 0.566331 3:-2978523 None:intergenic
GGTTCTTTATTGGAATGGAA+GGG 0.567480 3:+2982353 MsG0380011647.01.T01:intron
AATCAGGGTGTTGATGGAGC+TGG 0.572135 3:+2983623 MsG0380011647.01.T01:CDS
ATAGCACTGCATCTACAAGA+TGG 0.573918 3:-2982475 None:intergenic
TCAAACACGCAAGATGGAAG+AGG 0.575860 3:-2982882 None:intergenic
CTTGCACGCCAAATGAGTGC+CGG 0.580024 3:+2983117 MsG0380011647.01.T01:CDS
GAAAAGTAACAGGAACATAG+AGG 0.580540 3:-2981768 None:intergenic
CCACCAACACTTTATCAAGC+AGG 0.580628 3:+2981239 MsG0380011647.01.T01:CDS
TGTAAACCACCATTTCCTCC+TGG 0.580699 3:-2983839 None:intergenic
AGGAGCGCAGGACTGGACTC+AGG 0.581791 3:+2983581 MsG0380011647.01.T01:intron
CATCTCCATCTGCCACACCC+TGG 0.582406 3:+2981453 MsG0380011647.01.T01:CDS
ATGACAGGAACCTATGGCTA+AGG 0.582916 3:+2982837 MsG0380011647.01.T01:intron
ATCATTTGCAGGCCGTGAAG+CGG 0.586729 3:-2983870 None:intergenic
ATCAAAGGTTGTCTGAGCAT+AGG 0.588207 3:-2983723 None:intergenic
GGGTGAGGTAAGGAGCGTTG+GGG 0.590545 3:-2978502 None:intergenic
CGGATTCGATCGTCAAAACT+CGG 0.591793 3:+2983137 MsG0380011647.01.T01:CDS
GCTAGACATAACATGCCTAC+AGG 0.591975 3:+2983159 MsG0380011647.01.T01:CDS
GTCTCGAAAGCAATACTCAA+AGG 0.593508 3:-2981797 None:intergenic
CCACTAGCGGAAGCCTGAGA+AGG 0.593790 3:-2983776 None:intergenic
CCTGCTTGATAAAGTGTTGG+TGG 0.595637 3:-2981239 None:intergenic
GTCGATCTAGAAAGAGGGTG+AGG 0.599358 3:-2978517 None:intergenic
TCCTGGCAGTCTTACACCAG+TGG 0.599394 3:-2983822 None:intergenic
GCAACCACTGAAGAGCTAAG+AGG 0.609666 3:+2982703 MsG0380011647.01.T01:CDS
ATGAAACAAACTCTAGTACA+GGG 0.610423 3:+2983073 MsG0380011647.01.T01:CDS
GCGCAGGACTGGACTCAGGT+TGG 0.610826 3:+2983585 MsG0380011647.01.T01:CDS
CGCCTGACTTGGACCACTAG+CGG 0.611911 3:-2983789 None:intergenic
TCTACTGCTATCAGAACAGT+AGG 0.612039 3:+2983650 MsG0380011647.01.T01:CDS
GGCAGTCTTACACCAGTGGA+AGG 0.612218 3:-2983818 None:intergenic
GTTCCAAGAAGCATCATCAA+AGG 0.612545 3:-2983738 None:intergenic
ACGAAGATATGTCCAGGGTG+TGG 0.615696 3:-2981465 None:intergenic
CCTGAGTCGATCTAGAAAGA+GGG 0.617855 3:-2978522 None:intergenic
ATTCATCATTCGGCTTGCAG+TGG 0.618403 3:+2981957 MsG0380011647.01.T01:CDS
CTGCTTGATACATTAACCGC+AGG 0.618547 3:+2982002 MsG0380011647.01.T01:CDS
GGATTTGGAAACAATCCTGT+AGG 0.631882 3:-2983174 None:intergenic
CCAAAGGTAACTCAATGTCA+TGG 0.635359 3:-2979816 None:intergenic
GATTGGTGTTAGCACTAGAG+AGG 0.640269 3:+2979632 MsG0380011647.01.T01:five_prime_UTR
TCTTACACCAGTGGAAGGAG+CGG 0.646620 3:-2983813 None:intergenic
AGAGGGTAGCTGAGTGATGG+TGG 0.647475 3:+2979501 MsG0380011647.01.T01:five_prime_UTR
GAGAAGGATTAATAGGCCAA+AGG 0.655734 3:-2983760 None:intergenic
TTGAAATATATAGCACACAT+GGG 0.660600 3:+2981744 MsG0380011647.01.T01:CDS
AGACTGCCAGGAGGAAATGG+TGG 0.661112 3:+2983833 MsG0380011647.01.T01:CDS
TATTAATGATGGACAAAGGG+CGG 0.662357 3:+2979579 MsG0380011647.01.T01:five_prime_UTR
TGAAACAAACTCTAGTACAG+GGG 0.662791 3:+2983074 MsG0380011647.01.T01:CDS
CCGACACTCAACAATGCCGA+AGG 0.664560 3:+2983195 MsG0380011647.01.T01:CDS
TATGGCTGAGACTGTTCGGG+AGG 0.665136 3:+2983913 MsG0380011647.01.T01:CDS
TCAACATCCAATGGAACCAG+AGG 0.665506 3:-2979552 None:intergenic
CTGAGAGGGTAGCTGAGTGA+TGG 0.668106 3:+2979498 MsG0380011647.01.T01:five_prime_UTR
AGACCTGCTTGATAAAGTGT+TGG 0.670804 3:-2981242 None:intergenic
ATGGTGGTATACAAACCCAA+AGG 0.677582 3:-2979832 None:intergenic
ATGCTGTACAGGACTTGCAG+CGG 0.680004 3:+2984766 MsG0380011647.01.T01:CDS
ATTCGTCAATAACCCTATGG+TGG 0.680473 3:-2979848 None:intergenic
CAACATCCAATGGAACCAGA+GGG 0.682440 3:-2979551 None:intergenic
TATACACGAAGATATGTCCA+GGG 0.692791 3:-2981470 None:intergenic
GAAGTTTATAGCAATTTCGG+CGG 0.708760 3:+2979681 MsG0380011647.01.T01:CDS
TGGCTAGAGATCGATTGGAG+CGG 0.719750 3:+2981423 MsG0380011647.01.T01:CDS
ACTGGTGTAAGACTGCCAGG+AGG 0.796600 3:+2983824 MsG0380011647.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAGTATAAATAGATTA+TGG + Chr3:2979943-2979962 MsG0380011647.01.T01:intron 10.0%
!! TTAATTAGTAATTAATTAAC+TGG - Chr3:2978876-2978895 None:intergenic 10.0%
!! TTATTAAGTATTATATTTGA+TGG + Chr3:2984628-2984647 MsG0380011647.01.T01:intron 10.0%
!!! ATTTTTATTATTTTGTTGAA+AGG - Chr3:2984397-2984416 None:intergenic 10.0%
!! AAATGAATCAAAAAATTCAA+AGG - Chr3:2978652-2978671 None:intergenic 15.0%
!! AACCATTATAGAAAAAAATT+GGG + Chr3:2984193-2984212 MsG0380011647.01.T01:intron 15.0%
!! AATAAAAATTGAAAGATTTC+AGG - Chr3:2982192-2982211 None:intergenic 15.0%
!! AATGAATCAAAAAATTCAAA+GGG - Chr3:2978651-2978670 None:intergenic 15.0%
!! CTACATATAAAAAACTAAAA+TGG - Chr3:2983502-2983521 None:intergenic 15.0%
!! TGATACAATATATATTTACT+AGG - Chr3:2981098-2981117 None:intergenic 15.0%
!! TTGAAAAGTTTAAATGTAAT+GGG + Chr3:2981121-2981140 MsG0380011647.01.T01:intron 15.0%
!! TTTGAAAAGTTTAAATGTAA+TGG + Chr3:2981120-2981139 MsG0380011647.01.T01:intron 15.0%
!!! AATTGTTATTTATTATGTCA+TGG + Chr3:2981181-2981200 MsG0380011647.01.T01:intron 15.0%
!!! ATTATTGTAATTTTATAGCT+TGG + Chr3:2981673-2981692 MsG0380011647.01.T01:intron 15.0%
!!! TCATTTTTTTTTTTAGGAAA+TGG - Chr3:2978607-2978626 None:intergenic 15.0%
!!! TTGAATTTTTTGATTCATTT+TGG + Chr3:2978652-2978671 MsG0380011647.01.T01:intron 15.0%
!!! TTTTCTGCATAATAAAATTA+AGG - Chr3:2984710-2984729 None:intergenic 15.0%
!!! TTTTTCTATTTGGATTTTTT+TGG + Chr3:2979400-2979419 MsG0380011647.01.T01:intron 15.0%
!! AAAAGAAAATCAATAAACAC+AGG - Chr3:2982590-2982609 None:intergenic 20.0%
!! AAGAAAGTTGAATGAAAAAA+TGG - Chr3:2982159-2982178 None:intergenic 20.0%
!! AAGAGAATCATATATAAAAC+AGG - Chr3:2982104-2982123 None:intergenic 20.0%
!! AATAACTAATCAACTCTATT+GGG + Chr3:2982058-2982077 MsG0380011647.01.T01:intron 20.0%
!! AATTTATAAGCTAGTTAACA+TGG + Chr3:2980958-2980977 MsG0380011647.01.T01:intron 20.0%
!! ACATGATATGATAAGTAATA+AGG - Chr3:2980401-2980420 None:intergenic 20.0%
!! ACCATTATAGAAAAAAATTG+GGG + Chr3:2984194-2984213 MsG0380011647.01.T01:intron 20.0%
!! ATATACCATGGAAAAAAATA+TGG - Chr3:2980593-2980612 None:intergenic 20.0%
!! CAACATATAAAAGGAAAATA+AGG - Chr3:2980922-2980941 None:intergenic 20.0%
!! CAACCATTATAGAAAAAAAT+TGG + Chr3:2984192-2984211 MsG0380011647.01.T01:intron 20.0%
!! CTTTAGATTCAATATATATC+AGG - Chr3:2984740-2984759 None:intergenic 20.0%
!! TAATAACTAATCAACTCTAT+TGG + Chr3:2982057-2982076 MsG0380011647.01.T01:intron 20.0%
!! TTAGTTAAAATCTCATTGAT+CGG + Chr3:2978758-2978777 MsG0380011647.01.T01:intron 20.0%
!!! AAATTTAATTTGCTTATGAC+AGG + Chr3:2982822-2982841 MsG0380011647.01.T01:intron 20.0%
!!! AAGTAATTTTTTCTGAACTT+TGG + Chr3:2984028-2984047 MsG0380011647.01.T01:intron 20.0%
!!! ACATGTATTTTTATGAGAAA+AGG + Chr3:2980499-2980518 MsG0380011647.01.T01:intron 20.0%
!!! AGTAATTTTTTCTGAACTTT+GGG + Chr3:2984029-2984048 MsG0380011647.01.T01:intron 20.0%
!!! AGTGTAATTTTCATTCTTTT+AGG + Chr3:2980129-2980148 MsG0380011647.01.T01:intron 20.0%
!!! CATGTATTTTTATGAGAAAA+GGG + Chr3:2980500-2980519 MsG0380011647.01.T01:intron 20.0%
!!! CATTAAACTCTTTTTCTATT+TGG + Chr3:2979390-2979409 MsG0380011647.01.T01:intron 20.0%
!!! CTAATTTGTTCTTTCAAAAT+TGG + Chr3:2978897-2978916 MsG0380011647.01.T01:intron 20.0%
!!! CTTAGATTTAATTTTCGTAA+AGG + Chr3:2981632-2981651 MsG0380011647.01.T01:intron 20.0%
!!! CTTATTTTCCTTTTATATGT+TGG + Chr3:2980920-2980939 MsG0380011647.01.T01:intron 20.0%
!!! GTGTAATTTTCATTCTTTTA+GGG + Chr3:2980130-2980149 MsG0380011647.01.T01:intron 20.0%
!!! GTTCTTAATTTGCATAAATT+TGG + Chr3:2982535-2982554 MsG0380011647.01.T01:intron 20.0%
!!! TACTTTTGAAGTAATTTAGT+AGG + Chr3:2980555-2980574 MsG0380011647.01.T01:intron 20.0%
!!! TCATTTTAAACTAAGATAGA+GGG + Chr3:2980067-2980086 MsG0380011647.01.T01:intron 20.0%
!!! TGTAATTTTCATTCTTTTAG+GGG + Chr3:2980131-2980150 MsG0380011647.01.T01:intron 20.0%
!!! TTCATTTTAAACTAAGATAG+AGG + Chr3:2980066-2980085 MsG0380011647.01.T01:intron 20.0%
! AAAAATAAGTAACTCCTTCA+AGG - Chr3:2984683-2984702 None:intergenic 25.0%
! AAACATGAGAAAATTGCAAT+GGG + Chr3:2984138-2984157 MsG0380011647.01.T01:intron 25.0%
! AAATCAGTTCAGAAACATAT+AGG - Chr3:2982976-2982995 None:intergenic 25.0%
! AACCACTAATTACACATATT+TGG - Chr3:2979105-2979124 None:intergenic 25.0%
! AAGAATTTATAGTTCATCCT+AGG + Chr3:2980362-2980381 MsG0380011647.01.T01:intron 25.0%
! AATGATCCAAACATAGATTA+TGG + Chr3:2980215-2980234 MsG0380011647.01.T01:intron 25.0%
! ACTATAGTAGTAAAAAGGAT+CGG + Chr3:2983366-2983385 MsG0380011647.01.T01:intron 25.0%
! AGAAAGAACAATGTTGATAT+AGG - Chr3:2980624-2980643 None:intergenic 25.0%
! ATAACTAATCAACTCTATTG+GGG + Chr3:2982059-2982078 MsG0380011647.01.T01:intron 25.0%
! ATCCAAATATGTGTAATTAG+TGG + Chr3:2979100-2979119 MsG0380011647.01.T01:intron 25.0%
! ATGTTGAACCATATTAATGA+TGG + Chr3:2979568-2979587 MsG0380011647.01.T01:five_prime_UTR 25.0%
! ATTTGAACTTCCTAATTATG+TGG + Chr3:2982320-2982339 MsG0380011647.01.T01:intron 25.0%
! CAAACACTATAGTAGTAAAA+AGG + Chr3:2983361-2983380 MsG0380011647.01.T01:intron 25.0%
! CTAAATAAATGAAGACTTGT+AGG - Chr3:2983433-2983452 None:intergenic 25.0%
! GAAAGAACAATGTTGATATA+GGG - Chr3:2980623-2980642 None:intergenic 25.0%
! GAGTTATATCCCATATATAT+GGG - Chr3:2983400-2983419 None:intergenic 25.0%
! GATGATATTCAAATTCTTGA+GGG + Chr3:2984359-2984378 MsG0380011647.01.T01:intron 25.0%
! GCTGAAGTTATTATTAGTAA+TGG + Chr3:2979654-2979673 MsG0380011647.01.T01:exon 25.0%
! GGATTTAATTAGATTGTTCA+TGG + Chr3:2981878-2981897 MsG0380011647.01.T01:intron 25.0%
! TAAGCTAACAAAAGTTGTTA+TGG + Chr3:2980443-2980462 MsG0380011647.01.T01:intron 25.0%
! TAATTATGTGGTATAACTGT+AGG + Chr3:2982332-2982351 MsG0380011647.01.T01:intron 25.0%
! TACAGTTATACCACATAATT+AGG - Chr3:2982333-2982352 None:intergenic 25.0%
! TATAACTGTAGGTTCTTTAT+TGG + Chr3:2982343-2982362 MsG0380011647.01.T01:intron 25.0%
! TATTTGACAACACAGTTTAA+GGG + Chr3:2984600-2984619 MsG0380011647.01.T01:intron 25.0%
! TCACACTAATCAGATTATTT+CGG - Chr3:2982247-2982266 None:intergenic 25.0%
! TGAGTTATATCCCATATATA+TGG - Chr3:2983401-2983420 None:intergenic 25.0%
! TGATGATATTCAAATTCTTG+AGG + Chr3:2984358-2984377 MsG0380011647.01.T01:intron 25.0%
! TGTGAAGTTTATAGCAATTT+CGG + Chr3:2979678-2979697 MsG0380011647.01.T01:CDS 25.0%
! TTAGAGAAACTTAAATCAGA+TGG + Chr3:2979754-2979773 MsG0380011647.01.T01:CDS 25.0%
! TTCAAAAGTAAAGAAAGAGA+GGG - Chr3:2980545-2980564 None:intergenic 25.0%
! TTGAAATATATAGCACACAT+GGG + Chr3:2981744-2981763 MsG0380011647.01.T01:CDS 25.0%
! TTGGTCATTACTTGTATATA+TGG + Chr3:2982432-2982451 MsG0380011647.01.T01:CDS 25.0%
! TTTAACATAAATGACAGCTA+GGG + Chr3:2981576-2981595 MsG0380011647.01.T01:intron 25.0%
! TTTGCTAAATTATCATTTGC+AGG - Chr3:2983884-2983903 None:intergenic 25.0%
! TTTGGATCATTCAAAAGTAA+AGG - Chr3:2980206-2980225 None:intergenic 25.0%
!! CAAAAAATCTAAAACATACC+TGG - Chr3:2983970-2983989 None:intergenic 25.0%
!! CGTTAATTATGTCATTTACA+AGG + Chr3:2980727-2980746 MsG0380011647.01.T01:intron 25.0%
!! GATTAGTTATTATAAGTTCC+AGG - Chr3:2982049-2982068 None:intergenic 25.0%
!! GTAATTTTCATTCTTTTAGG+GGG + Chr3:2980132-2980151 MsG0380011647.01.T01:intron 25.0%
!! TACCTTTAAAGAACAAAGTA+CGG - Chr3:2981285-2981304 None:intergenic 25.0%
!! TGATAGTTCTTTTCAAAAAG+CGG + Chr3:2979275-2979294 MsG0380011647.01.T01:intron 25.0%
!! TGTTATTTATTATGTCATGG+TGG + Chr3:2981184-2981203 MsG0380011647.01.T01:intron 25.0%
!! TTCTCTAACTTGTATTGAAT+TGG + Chr3:2978815-2978834 MsG0380011647.01.T01:intron 25.0%
!!! ACCCCAATTTTTTTCTATAA+TGG - Chr3:2984198-2984217 None:intergenic 25.0%
!!! AGCATTGTTATTCATTTTCT+TGG + Chr3:2981496-2981515 MsG0380011647.01.T01:CDS 25.0%
!!! TAAAAGGCTTTATTAGACTA+AGG + Chr3:2982644-2982663 MsG0380011647.01.T01:CDS 25.0%
!!! TAATTTTCATTCTTTTAGGG+GGG + Chr3:2980133-2980152 MsG0380011647.01.T01:intron 25.0%
!!! TATGTTTCTGAACTGATTTT+AGG + Chr3:2982977-2982996 MsG0380011647.01.T01:intron 25.0%
!!! TGAAGGAGTTACTTATTTTT+TGG + Chr3:2984683-2984702 MsG0380011647.01.T01:intron 25.0%
!!! TGGAGTTTTAGCAAAATTAA+AGG + Chr3:2979046-2979065 MsG0380011647.01.T01:intron 25.0%
!!! TTAGGGTATCTTATTTCTTT+TGG + Chr3:2979471-2979490 MsG0380011647.01.T01:intron 25.0%
!!! TTAGTTCTTTTCTTTTTCTG+TGG + Chr3:2980750-2980769 MsG0380011647.01.T01:intron 25.0%
!!! TTATTGATTTTCTTTTGAGC+AGG + Chr3:2982594-2982613 MsG0380011647.01.T01:intron 25.0%
!!! TTTAGTGCATATGTTTTGAT+TGG + Chr3:2978985-2979004 MsG0380011647.01.T01:intron 25.0%
!!! TTTGATTCATTTTGGTTGTT+GGG + Chr3:2978660-2978679 MsG0380011647.01.T01:intron 25.0%
!!! TTTTGATTCATTTTGGTTGT+TGG + Chr3:2978659-2978678 MsG0380011647.01.T01:intron 25.0%
AACATTGTTCTTTCTGTTCA+TGG + Chr3:2980629-2980648 MsG0380011647.01.T01:intron 30.0%
AAGAGAAAGAGAGAGAATTT+AGG - Chr3:2978439-2978458 None:intergenic 30.0%
AAGTAATTTAGTAGGCTACA+AGG + Chr3:2980563-2980582 MsG0380011647.01.T01:intron 30.0%
AATGAAACAAACTCTAGTAC+AGG + Chr3:2983072-2983091 MsG0380011647.01.T01:CDS 30.0%
ACACTAAGCCAACATATAAA+AGG - Chr3:2980931-2980950 None:intergenic 30.0%
ACTCATCCATAATCTATGTT+TGG - Chr3:2980224-2980243 None:intergenic 30.0%
AGTAATTTAGTAGGCTACAA+GGG + Chr3:2980564-2980583 MsG0380011647.01.T01:intron 30.0%
ATAAGGAACACGATGAAAAA+AGG - Chr3:2980905-2980924 None:intergenic 30.0%
ATAGATGATAGTCCAATTGT+TGG + Chr3:2984299-2984318 MsG0380011647.01.T01:intron 30.0%
ATGAAACAAACTCTAGTACA+GGG + Chr3:2983073-2983092 MsG0380011647.01.T01:CDS 30.0%
ATGAATGGTATGATAACTGA+TGG + Chr3:2984057-2984076 MsG0380011647.01.T01:intron 30.0%
ATTACACATATTTGGATTGC+CGG - Chr3:2979097-2979116 None:intergenic 30.0%
CAAACATGAGAAAATTGCAA+TGG + Chr3:2984137-2984156 MsG0380011647.01.T01:intron 30.0%
CAAATTTCTAATCCTCTTTG+GGG + Chr3:2978700-2978719 MsG0380011647.01.T01:intron 30.0%
CAAGTAGTGTTAAAGTAGAA+TGG + Chr3:2980095-2980114 MsG0380011647.01.T01:intron 30.0%
CAAGTCTTCATTTATTTAGC+TGG + Chr3:2983434-2983453 MsG0380011647.01.T01:intron 30.0%
CTATTTGACAACACAGTTTA+AGG + Chr3:2984599-2984618 MsG0380011647.01.T01:intron 30.0%
CTTCAAAAGTAAAGAAAGAG+AGG - Chr3:2980546-2980565 None:intergenic 30.0%
CTTGAAATATATAGCACACA+TGG + Chr3:2981743-2981762 MsG0380011647.01.T01:CDS 30.0%
GAAATGGTGGTTTACATATA+AGG + Chr3:2983846-2983865 MsG0380011647.01.T01:CDS 30.0%
GAAATGTGTCCCATATATAT+GGG + Chr3:2983388-2983407 MsG0380011647.01.T01:intron 30.0%
GATTTATTGCAAGATCAGAA+TGG + Chr3:2983467-2983486 MsG0380011647.01.T01:intron 30.0%
GATTTCAGTTACTTGACATA+TGG + Chr3:2981934-2981953 MsG0380011647.01.T01:CDS 30.0%
GCAAATTTCTAATCCTCTTT+GGG + Chr3:2978699-2978718 MsG0380011647.01.T01:intron 30.0%
GTCATTACTTGTATATATGG+CGG + Chr3:2982435-2982454 MsG0380011647.01.T01:CDS 30.0%
GTTCTTTCAAAATTGGTTGT+TGG + Chr3:2978904-2978923 MsG0380011647.01.T01:intron 30.0%
GTTTAACATAAATGACAGCT+AGG + Chr3:2981575-2981594 MsG0380011647.01.T01:intron 30.0%
GTTTAATGAATGTGCATTGA+CGG - Chr3:2979378-2979397 None:intergenic 30.0%
TAAATCTAAGCATGCTCAAA+CGG - Chr3:2981622-2981641 None:intergenic 30.0%
TAACTAATCAACTCTATTGG+GGG + Chr3:2982060-2982079 MsG0380011647.01.T01:intron 30.0%
TAAGGAACACGATGAAAAAA+GGG - Chr3:2980904-2980923 None:intergenic 30.0%
TAATATGGTTCAACATCCAA+TGG - Chr3:2979564-2979583 None:intergenic 30.0%
TACTTATCATATCATGTTGC+TGG + Chr3:2980404-2980423 MsG0380011647.01.T01:intron 30.0%
TAGATAAGAAAAGGCCAAAT+CGG - Chr3:2983562-2983581 None:intergenic 30.0%
TATCAAGCAGTTTAGTTGTT+CGG - Chr3:2981992-2982011 None:intergenic 30.0%
TCAAAAGTAAAGAAAGAGAG+GGG - Chr3:2980544-2980563 None:intergenic 30.0%
TCATAAAAATACATGTCTGC+AGG - Chr3:2980495-2980514 None:intergenic 30.0%
TGAATGGTATGATAACTGAT+GGG + Chr3:2984058-2984077 MsG0380011647.01.T01:intron 30.0%
TGACATATGGATTCATCATT+CGG + Chr3:2981947-2981966 MsG0380011647.01.T01:CDS 30.0%
TGCAAATTTCTAATCCTCTT+TGG + Chr3:2978698-2978717 MsG0380011647.01.T01:intron 30.0%
TTAAAATCTCATTGATCGGT+AGG + Chr3:2978762-2978781 MsG0380011647.01.T01:intron 30.0%
TTGTCAAATAGTGACTATTG+AGG - Chr3:2984590-2984609 None:intergenic 30.0%
TTGTGTGCAATATGTATAAG+AGG + Chr3:2983299-2983318 MsG0380011647.01.T01:intron 30.0%
TTTAGTAGTTGAAAGTAGTG+AGG + Chr3:2979149-2979168 MsG0380011647.01.T01:intron 30.0%
! ACTTCTCTTTTTATGCTTCT+AGG + Chr3:2981708-2981727 MsG0380011647.01.T01:intron 30.0%
! ATGCTATAACTTGTACAAGT+TGG + Chr3:2984471-2984490 MsG0380011647.01.T01:intron 30.0%
! ATTTATTATGTCATGGTGGA+TGG + Chr3:2981188-2981207 MsG0380011647.01.T01:intron 30.0%
! GCTGTCATTTATGTTAAACA+AGG - Chr3:2981574-2981593 None:intergenic 30.0%
! GTCTAATAAAGCCTTTTATG+CGG - Chr3:2982642-2982661 None:intergenic 30.0%
!! ACCATATTAATGATGGACAA+AGG + Chr3:2979575-2979594 MsG0380011647.01.T01:five_prime_UTR 30.0%
!! AGTTTGTTGACTTAGAGATA+TGG + Chr3:2981056-2981075 MsG0380011647.01.T01:intron 30.0%
!! CCATATTAATGATGGACAAA+GGG + Chr3:2979576-2979595 MsG0380011647.01.T01:five_prime_UTR 30.0%
!! CTAGAGTTTGTTTCATTTTC+AGG - Chr3:2983069-2983088 None:intergenic 30.0%
!! CTTAAATCAGATGGACTAAT+TGG + Chr3:2979763-2979782 MsG0380011647.01.T01:CDS 30.0%
!! TTATATGTTGGCTTAGTGTT+TGG + Chr3:2980932-2980951 MsG0380011647.01.T01:intron 30.0%
!! TTTCTGAACTGATTTTAGGT+TGG + Chr3:2982981-2983000 MsG0380011647.01.T01:intron 30.0%
!!! AGATATGGCCACATTTTTTA+TGG + Chr3:2982406-2982425 MsG0380011647.01.T01:CDS 30.0%
!!! AGCATATTTTTTTGCCGATT+TGG + Chr3:2983545-2983564 MsG0380011647.01.T01:intron 30.0%
!!! CTTTTTATGCTTCTAGGATA+AGG + Chr3:2981714-2981733 MsG0380011647.01.T01:intron 30.0%
!!! TTTTAGGGTTCTATACGATT+TGG + Chr3:2978728-2978747 MsG0380011647.01.T01:intron 30.0%
AAAAATTCAAAGGGTAAGCG+AGG - Chr3:2978642-2978661 None:intergenic 35.0%
AAAGTTTACACTGACATGCA+TGG + Chr3:2979196-2979215 MsG0380011647.01.T01:intron 35.0%
AAATCTAAGCATGCTCAAAC+GGG - Chr3:2981621-2981640 None:intergenic 35.0%
AAGGCTCAAAGAAAAGTAAC+AGG - Chr3:2981781-2981800 None:intergenic 35.0%
AATAGTCTGAATCAGTTTGC+AGG - Chr3:2980793-2980812 None:intergenic 35.0%
AATGGAAGGGAATACTTATC+CGG + Chr3:2982366-2982385 MsG0380011647.01.T01:CDS 35.0%
ACAAATCAACATGTCCCATT+GGG - Chr3:2979976-2979995 None:intergenic 35.0%
ACAATTCGTCAATAACCCTA+TGG - Chr3:2979854-2979873 None:intergenic 35.0%
ACCAAGTGCCATAAAAAATG+TGG - Chr3:2982417-2982436 None:intergenic 35.0%
AGAAAATTGCAATGGGTGAA+CGG + Chr3:2984145-2984164 MsG0380011647.01.T01:intron 35.0%
AGACATGCTATAACTTATCG+AGG - Chr3:2982288-2982307 None:intergenic 35.0%
AGGTTCTTTATTGGAATGGA+AGG + Chr3:2982352-2982371 MsG0380011647.01.T01:intron 35.0%
AGTGTTAAAGTAGAATGGCT+AGG + Chr3:2980100-2980119 MsG0380011647.01.T01:intron 35.0%
ATAGTCTGAATCAGTTTGCA+GGG - Chr3:2980792-2980811 None:intergenic 35.0%
ATATACACGAAGATATGTCC+AGG - Chr3:2981474-2981493 None:intergenic 35.0%
ATCAAACGCTCCATTCTTAT+TGG - Chr3:2979259-2979278 None:intergenic 35.0%
ATCAGTTTACGAGTTTCAGA+AGG - Chr3:2980698-2980717 None:intergenic 35.0%
ATCTACTCATATCATCATGC+TGG + Chr3:2981857-2981876 MsG0380011647.01.T01:intron 35.0%
ATTAGACTAAGGATAGCTCT+AGG + Chr3:2982655-2982674 MsG0380011647.01.T01:CDS 35.0%
ATTATGGCATTATGCCCAAT+GGG + Chr3:2979959-2979978 MsG0380011647.01.T01:intron 35.0%
ATTCCAAGATCCACAATGTT+TGG + Chr3:2984507-2984526 MsG0380011647.01.T01:intron 35.0%
CAAGGATTGTATCGAAAAAG+AGG - Chr3:2981556-2981575 None:intergenic 35.0%
CATGACATTGAGTTACCTTT+GGG + Chr3:2979817-2979836 MsG0380011647.01.T01:CDS 35.0%
CCCTTTGTCCATCATTAATA+TGG - Chr3:2979579-2979598 None:intergenic 35.0%
CCTTCTTAATCTTAGTCTCA+AGG + Chr3:2979891-2979910 MsG0380011647.01.T01:CDS 35.0%
CCTTGAGACTAAGATTAAGA+AGG - Chr3:2979894-2979913 None:intergenic 35.0%
CGTTCATTCTTTCTCTGTTA+GGG + Chr3:2979454-2979473 MsG0380011647.01.T01:intron 35.0%
CTGTAGGTTCTTTATTGGAA+TGG + Chr3:2982348-2982367 MsG0380011647.01.T01:intron 35.0%
GAAAAGTAACAGGAACATAG+AGG - Chr3:2981771-2981790 None:intergenic 35.0%
GAACTTTGGGTATGTATGAA+TGG + Chr3:2984042-2984061 MsG0380011647.01.T01:intron 35.0%
GAAGTTTATAGCAATTTCGG+CGG + Chr3:2979681-2979700 MsG0380011647.01.T01:CDS 35.0%
GCAATGATAAACCGCATAAA+AGG + Chr3:2982628-2982647 MsG0380011647.01.T01:CDS 35.0%
GGAAATGTGTCCCATATATA+TGG + Chr3:2983387-2983406 MsG0380011647.01.T01:intron 35.0%
GGGTTTCTGCAATTATCAAT+CGG - Chr3:2978485-2978504 None:intergenic 35.0%
GGTTCTTTATTGGAATGGAA+GGG + Chr3:2982353-2982372 MsG0380011647.01.T01:intron 35.0%
GTTTCTGCAGACAACATATT+TGG + Chr3:2982212-2982231 MsG0380011647.01.T01:intron 35.0%
GTTTGTATGTTCAGTACTTC+TGG + Chr3:2980000-2980019 MsG0380011647.01.T01:intron 35.0%
TAGGGAAAAACGATATACCA+TGG - Chr3:2980605-2980624 None:intergenic 35.0%
TATACACGAAGATATGTCCA+GGG - Chr3:2981473-2981492 None:intergenic 35.0%
TATAGTTGTTGAAGCCTTGA+AGG + Chr3:2984666-2984685 MsG0380011647.01.T01:intron 35.0%
TATCATATCATGTTGCTGGT+GGG + Chr3:2980408-2980427 MsG0380011647.01.T01:intron 35.0%
TCAGTTTACGAGTTTCAGAA+GGG - Chr3:2980697-2980716 None:intergenic 35.0%
TCCACAAAAAAAGAGACAGA+AGG - Chr3:2983262-2983281 None:intergenic 35.0%
TCGTTCATTCTTTCTCTGTT+AGG + Chr3:2979453-2979472 MsG0380011647.01.T01:intron 35.0%
TCTACCATCTTTCCTACTAT+GGG - Chr3:2984224-2984243 None:intergenic 35.0%
TGAAACAAACTCTAGTACAG+GGG + Chr3:2983074-2983093 MsG0380011647.01.T01:CDS 35.0%
TGATTCTCTTTGCATTACCT+AGG + Chr3:2982114-2982133 MsG0380011647.01.T01:intron 35.0%
TTATCATATCATGTTGCTGG+TGG + Chr3:2980407-2980426 MsG0380011647.01.T01:intron 35.0%
TTCCAAGATCCACAATGTTT+GGG + Chr3:2984508-2984527 MsG0380011647.01.T01:intron 35.0%
TTCTACCATCTTTCCTACTA+TGG - Chr3:2984225-2984244 None:intergenic 35.0%
TTGAAGTCAGATGAAAATCC+AGG + Chr3:2979608-2979627 MsG0380011647.01.T01:five_prime_UTR 35.0%
TTTCTCATGTTTGCAACACT+AGG - Chr3:2984130-2984149 None:intergenic 35.0%
TTTGGATAAAAGTCTGATCC+TGG + Chr3:2982028-2982047 MsG0380011647.01.T01:intron 35.0%
! ACTTTTATCCAAACTACCTG+CGG - Chr3:2982021-2982040 None:intergenic 35.0%
! ATATGAATTGCAGGCCATTT+TGG + Chr3:2981905-2981924 MsG0380011647.01.T01:intron 35.0%
! GAAATGATGGAAAACTAGGA+TGG - Chr3:2984439-2984458 None:intergenic 35.0%
! GCTAGAAATGATGGAAAACT+AGG - Chr3:2984443-2984462 None:intergenic 35.0%
! TAAAGCTTTTGATGCTGTAC+AGG + Chr3:2984755-2984774 MsG0380011647.01.T01:CDS 35.0%
! TAAGTTGGAGTTGTATGTCA+TGG - Chr3:2980301-2980320 None:intergenic 35.0%
! TACATGACAAGTTGACAACA+TGG + Chr3:2979315-2979334 MsG0380011647.01.T01:intron 35.0%
! TCTTTCTCTCTCTGTTGATT+CGG + Chr3:2978455-2978474 MsG0380011647.01.T01:five_prime_UTR 35.0%
! TTTAGCAAATGTGCTTGCTA+TGG + Chr3:2983895-2983914 MsG0380011647.01.T01:CDS 35.0%
!! AGTTTGTTTCATTTTCAGGC+CGG - Chr3:2983065-2983084 None:intergenic 35.0%
!! GATTTGGCCTTTTCTTATCT+AGG + Chr3:2983561-2983580 MsG0380011647.01.T01:intron 35.0%
!! TATTAATGATGGACAAAGGG+CGG + Chr3:2979579-2979598 MsG0380011647.01.T01:five_prime_UTR 35.0%
!! TCTACGGTGTTAAGTTTTGT+AGG + Chr3:2979706-2979725 MsG0380011647.01.T01:CDS 35.0%
!! TTTTCTTGGTTGATGTTCTC+TGG + Chr3:2981510-2981529 MsG0380011647.01.T01:CDS 35.0%
!!! ACTGATTTTAGGTTGGATCA+AGG + Chr3:2982988-2983007 MsG0380011647.01.T01:intron 35.0%
!!! AGTGCATATGTTTTGATTGG+TGG + Chr3:2978988-2979007 MsG0380011647.01.T01:intron 35.0%
!!! CTCTTTGGGGTATGATTTTA+GGG + Chr3:2978713-2978732 MsG0380011647.01.T01:intron 35.0%
!!! GGTGTCCATATTTTTTTCCA+TGG + Chr3:2980585-2980604 MsG0380011647.01.T01:intron 35.0%
!!! TCCTTCTGTCTCTTTTTTTG+TGG + Chr3:2983258-2983277 MsG0380011647.01.T01:intron 35.0%
AACATGGTGGTTCTTATTGG+AGG + Chr3:2979331-2979350 MsG0380011647.01.T01:intron 40.0%
AAGCTAGTTAACATGGTTGC+AGG + Chr3:2980965-2980984 MsG0380011647.01.T01:intron 40.0%
AATCTCATTGATCGGTAGGT+AGG + Chr3:2978766-2978785 MsG0380011647.01.T01:intron 40.0%
ACACTGACGTCCAATAAGAA+TGG + Chr3:2979246-2979265 MsG0380011647.01.T01:intron 40.0%
ACCTGGAATATTATGTCGTC+CGG - Chr3:2983953-2983972 None:intergenic 40.0%
ACTGTTCTGATAGCAGTAGA+TGG - Chr3:2983650-2983669 None:intergenic 40.0%
AGACCTGCTTGATAAAGTGT+TGG - Chr3:2981245-2981264 None:intergenic 40.0%
AGATGGTAGAATCTCGTTTG+AGG + Chr3:2984234-2984253 MsG0380011647.01.T01:intron 40.0%
ATAGCACTGCATCTACAAGA+TGG - Chr3:2982478-2982497 None:intergenic 40.0%
ATCAAAGGTTGTCTGAGCAT+AGG - Chr3:2983726-2983745 None:intergenic 40.0%
ATGAGACATCTTGCATCTGT+CGG + Chr3:2983695-2983714 MsG0380011647.01.T01:CDS 40.0%
ATGATGCTTCTTGGAACCTT+TGG + Chr3:2983744-2983763 MsG0380011647.01.T01:CDS 40.0%
ATGGTGGTATACAAACCCAA+AGG - Chr3:2979835-2979854 None:intergenic 40.0%
ATTATGTCGTCCGGAATATG+AGG - Chr3:2983944-2983963 None:intergenic 40.0%
ATTCGTCAATAACCCTATGG+TGG - Chr3:2979851-2979870 None:intergenic 40.0%
ATTTCATAAACTCTGCCCTC+TGG + Chr3:2979536-2979555 MsG0380011647.01.T01:five_prime_UTR 40.0%
CACAAATCAACATGTCCCAT+TGG - Chr3:2979977-2979996 None:intergenic 40.0%
CACTTTATCAAGCAGGTCTT+TGG + Chr3:2981246-2981265 MsG0380011647.01.T01:CDS 40.0%
CAGATGAAAATCCAGGAGAT+TGG + Chr3:2979615-2979634 MsG0380011647.01.T01:five_prime_UTR 40.0%
CATGGTGTGATATGAATTGC+AGG + Chr3:2981896-2981915 MsG0380011647.01.T01:intron 40.0%
CATTGTGGATCTTGGAATCT+AGG - Chr3:2984505-2984524 None:intergenic 40.0%
CCAAAGGTAACTCAATGTCA+TGG - Chr3:2979819-2979838 None:intergenic 40.0%
CCATGACATTGAGTTACCTT+TGG + Chr3:2979816-2979835 MsG0380011647.01.T01:CDS 40.0%
CCTAAAATCATACCCCAAAG+AGG - Chr3:2978715-2978734 None:intergenic 40.0%
CTAGCTCAGCAATCAATCAA+TGG + Chr3:2983335-2983354 MsG0380011647.01.T01:intron 40.0%
CTGAAATCCATGCACCAAAA+TGG - Chr3:2981922-2981941 None:intergenic 40.0%
GAAGCCTGAGAAGGATTAAT+AGG - Chr3:2983770-2983789 None:intergenic 40.0%
GACAACATGGTGGTTCTTAT+TGG + Chr3:2979328-2979347 MsG0380011647.01.T01:intron 40.0%
GACAAGTATACATCTCAGTC+AGG - Chr3:2983014-2983033 None:intergenic 40.0%
GAGAAGGATTAATAGGCCAA+AGG - Chr3:2983763-2983782 None:intergenic 40.0%
GATGATAGTCCAATTGTTGG+AGG + Chr3:2984302-2984321 MsG0380011647.01.T01:intron 40.0%
GATTATGGCATTATGCCCAA+TGG + Chr3:2979958-2979977 MsG0380011647.01.T01:intron 40.0%
GGAATACTTATCCGGAACTT+GGG + Chr3:2982374-2982393 MsG0380011647.01.T01:CDS 40.0%
GGATTTGGAAACAATCCTGT+AGG - Chr3:2983177-2983196 None:intergenic 40.0%
GGCCGTACTTTGTTCTTTAA+AGG + Chr3:2981280-2981299 MsG0380011647.01.T01:CDS 40.0%
GTAAACTTTGATCCCAGAGA+AGG - Chr3:2979185-2979204 None:intergenic 40.0%
GTCTCAAGGTGAGTTTGTAA+TGG + Chr3:2979905-2979924 MsG0380011647.01.T01:intron 40.0%
GTCTCGAAAGCAATACTCAA+AGG - Chr3:2981800-2981819 None:intergenic 40.0%
GTTGTATGTCATGGACAAAC+CGG - Chr3:2980292-2980311 None:intergenic 40.0%
TACATATAAGGACCGCTTCA+CGG + Chr3:2983858-2983877 MsG0380011647.01.T01:CDS 40.0%
TACATTAACCGCAGGTAGTT+TGG + Chr3:2982010-2982029 MsG0380011647.01.T01:intron 40.0%
TACCCAAACATTGTGGATCT+TGG - Chr3:2984513-2984532 None:intergenic 40.0%
TAGTCCCATAGTAGGAAAGA+TGG + Chr3:2984217-2984236 MsG0380011647.01.T01:intron 40.0%
TCTACTGCTATCAGAACAGT+AGG + Chr3:2983650-2983669 MsG0380011647.01.T01:CDS 40.0%
TGCATAGATGTTTCAAGCTC+TGG + Chr3:2981403-2981422 MsG0380011647.01.T01:intron 40.0%
TGCTGAACAGCTAGAAATGA+TGG - Chr3:2984452-2984471 None:intergenic 40.0%
TGGCTGGAATTCAATTCACT+TGG + Chr3:2979783-2979802 MsG0380011647.01.T01:CDS 40.0%
TGGGTTTGTATACCACCATA+GGG + Chr3:2979836-2979855 MsG0380011647.01.T01:CDS 40.0%
TGTGATTTCGTCAAACTCAC+CGG + Chr3:2979075-2979094 MsG0380011647.01.T01:intron 40.0%
TTGATTGCAAGACACTCCAT+TGG + Chr3:2980870-2980889 MsG0380011647.01.T01:intron 40.0%
TTGCATTCTTGGCCAAATCA+GGG + Chr3:2983608-2983627 MsG0380011647.01.T01:CDS 40.0%
TTGCTTATGACAGGAACCTA+TGG + Chr3:2982831-2982850 MsG0380011647.01.T01:intron 40.0%
TTGGCCTATTAATCCTTCTC+AGG + Chr3:2983763-2983782 MsG0380011647.01.T01:CDS 40.0%
TTGGGTTTGTATACCACCAT+AGG + Chr3:2979835-2979854 MsG0380011647.01.T01:CDS 40.0%
TTGTATATATGGCGGCTTCA+TGG + Chr3:2982443-2982462 MsG0380011647.01.T01:CDS 40.0%
TTTCTGCTACCCAAACATTG+TGG - Chr3:2984520-2984539 None:intergenic 40.0%
! ACTTGTACAAGTTGGCACTT+AGG + Chr3:2984479-2984498 MsG0380011647.01.T01:intron 40.0%
! ATATCCTCTTAGCTCTTCAG+TGG - Chr3:2982710-2982729 None:intergenic 40.0%
! ATGACAAGTTGACAACATGG+TGG + Chr3:2979318-2979337 MsG0380011647.01.T01:intron 40.0%
! CACGGTGATTTTTGCAACTT+TGG + Chr3:2979026-2979045 MsG0380011647.01.T01:intron 40.0%
! CATTGATTGATTGCTGAGCT+AGG - Chr3:2983337-2983356 None:intergenic 40.0%
! CTTTGTTTCGTCAAGCTTAC+CGG + Chr3:2980270-2980289 MsG0380011647.01.T01:intron 40.0%
! GAGAGGGGTGTAAAGTATTA+TGG - Chr3:2980529-2980548 None:intergenic 40.0%
! GAGCGCTTTGGTTTATAAGT+TGG - Chr3:2980316-2980335 None:intergenic 40.0%
! GTGTGAAGATTTTACCTCCA+AGG - Chr3:2983225-2983244 None:intergenic 40.0%
! GTTGTTGGGTTTTTCTCGTT+TGG + Chr3:2978674-2978693 MsG0380011647.01.T01:intron 40.0%
!! AATCAGATGGACTAATTGGC+TGG + Chr3:2979767-2979786 MsG0380011647.01.T01:CDS 40.0%
!! ATTTCTTTTGGAGACCTGAG+AGG + Chr3:2979483-2979502 MsG0380011647.01.T01:five_prime_UTR 40.0%
!! CAACCTTTGATGATGCTTCT+TGG + Chr3:2983735-2983754 MsG0380011647.01.T01:CDS 40.0%
!! CAATGGGACATGTTGATTTG+TGG + Chr3:2979975-2979994 MsG0380011647.01.T01:intron 40.0%
!! GTTCCAAGAAGCATCATCAA+AGG - Chr3:2983741-2983760 None:intergenic 40.0%
!! TTTCTTTTGGAGACCTGAGA+GGG + Chr3:2979484-2979503 MsG0380011647.01.T01:five_prime_UTR 40.0%
!!! AGCTTTTTAGCCTTAGCCAT+AGG - Chr3:2982850-2982869 None:intergenic 40.0%
!!! CCTCTTTGGGGTATGATTTT+AGG + Chr3:2978712-2978731 MsG0380011647.01.T01:intron 40.0%
!!! GCCACATTTTTTATGGCACT+TGG + Chr3:2982413-2982432 MsG0380011647.01.T01:CDS 40.0%
!!! GTTTTGATTGGTGGTGACTT+CGG + Chr3:2978997-2979016 MsG0380011647.01.T01:intron 40.0%
AAAAAGGGATGCCACACCAA+TGG - Chr3:2980889-2980908 None:intergenic 45.0%
AAAAGTGGCTTTCGGCATGT+TGG - Chr3:2983036-2983055 None:intergenic 45.0%
AAGCAGGTCTTTGGTCAACT+TGG + Chr3:2981255-2981274 MsG0380011647.01.T01:CDS 45.0%
AATTGGGGTAGTCCCATAGT+AGG + Chr3:2984209-2984228 MsG0380011647.01.T01:intron 45.0%
ACCTGAGTCGATCTAGAAAG+AGG - Chr3:2978526-2978545 None:intergenic 45.0%
ACGATCTCAAACACGCAAGA+TGG - Chr3:2982891-2982910 None:intergenic 45.0%
AGACAGAAGGACATGTAGCA+TGG - Chr3:2983249-2983268 None:intergenic 45.0%
AGCAATTTCGGCGGTTTCTA+CGG + Chr3:2979690-2979709 MsG0380011647.01.T01:CDS 45.0%
AGCACGAGAAACTCTGCAAA+TGG - Chr3:2980047-2980066 None:intergenic 45.0%
AGGTCTTTGGTCAACTTGGT+TGG + Chr3:2981259-2981278 MsG0380011647.01.T01:CDS 45.0%
AGTACTTCTGGTAGACTACG+TGG + Chr3:2980012-2980031 MsG0380011647.01.T01:intron 45.0%
ATAAATGACAGCTAGGGCTG+TGG + Chr3:2981582-2981601 MsG0380011647.01.T01:intron 45.0%
ATACAACACATGCTCTGCCT+AGG - Chr3:2982134-2982153 None:intergenic 45.0%
ATAGCCTGCATGCGATAAGA+AGG - Chr3:2980656-2980675 None:intergenic 45.0%
ATCGACCAGAAAGACAGGTT+TGG - Chr3:2982770-2982789 None:intergenic 45.0%
ATGACAGGAACCTATGGCTA+AGG + Chr3:2982837-2982856 MsG0380011647.01.T01:intron 45.0%
CAACATCCAATGGAACCAGA+GGG - Chr3:2979554-2979573 None:intergenic 45.0%
CCACCAACACTTTATCAAGC+AGG + Chr3:2981239-2981258 MsG0380011647.01.T01:CDS 45.0%
CCTGAGTCGATCTAGAAAGA+GGG - Chr3:2978525-2978544 None:intergenic 45.0%
CGGATTCGATCGTCAAAACT+CGG + Chr3:2983137-2983156 MsG0380011647.01.T01:CDS 45.0%
CTATCAGAACAGTAGGTCTC+GGG + Chr3:2983657-2983676 MsG0380011647.01.T01:CDS 45.0%
CTCCATCTACCTCCAACAAT+TGG - Chr3:2984314-2984333 None:intergenic 45.0%
CTGCGCTCCTAGATAAGAAA+AGG - Chr3:2983571-2983590 None:intergenic 45.0%
CTGCTTGATACATTAACCGC+AGG + Chr3:2982002-2982021 MsG0380011647.01.T01:CDS 45.0%
GCTAGACATAACATGCCTAC+AGG + Chr3:2983159-2983178 MsG0380011647.01.T01:CDS 45.0%
GCTATCAGAACAGTAGGTCT+CGG + Chr3:2983656-2983675 MsG0380011647.01.T01:CDS 45.0%
GGAGGTTCTACCTCATATTC+CGG + Chr3:2983931-2983950 MsG0380011647.01.T01:CDS 45.0%
GGGAATACTTATCCGGAACT+TGG + Chr3:2982373-2982392 MsG0380011647.01.T01:CDS 45.0%
GGTGAGTTTGACGAAATCAC+AGG - Chr3:2979076-2979095 None:intergenic 45.0%
GTCCAATTGTTGGAGGTAGA+TGG + Chr3:2984309-2984328 MsG0380011647.01.T01:intron 45.0%
GTTGCATTCTTGGCCAAATC+AGG + Chr3:2983607-2983626 MsG0380011647.01.T01:CDS 45.0%
GTTTGCCAAACCTGTCTTTC+TGG + Chr3:2982762-2982781 MsG0380011647.01.T01:intron 45.0%
TAGTGCTAACACCAATCTCC+TGG - Chr3:2979629-2979648 None:intergenic 45.0%
TATTGCTTTCGAGACACTGC+AGG + Chr3:2981805-2981824 MsG0380011647.01.T01:CDS 45.0%
TCAAACACGCAAGATGGAAG+AGG - Chr3:2982885-2982904 None:intergenic 45.0%
TCAACATCCAATGGAACCAG+AGG - Chr3:2979555-2979574 None:intergenic 45.0%
TCCGGACGACATAATATTCC+AGG + Chr3:2983949-2983968 MsG0380011647.01.T01:CDS 45.0%
TCTAGAAAGAGGGTGAGGTA+AGG - Chr3:2978515-2978534 None:intergenic 45.0%
TGGTGACTTCGGTAGAATCA+CGG + Chr3:2979008-2979027 MsG0380011647.01.T01:intron 45.0%
TGTAAACCACCATTTCCTCC+TGG - Chr3:2983842-2983861 None:intergenic 45.0%
TGTTGTGAAGACACCAGAAC+TGG - Chr3:2980343-2980362 None:intergenic 45.0%
TTACCTCCAAGGAACACCTT+CGG - Chr3:2983214-2983233 None:intergenic 45.0%
TTGCTATGGCTGAGACTGTT+CGG + Chr3:2983909-2983928 MsG0380011647.01.T01:CDS 45.0%
! ATCTTGCGTGTTTGAGATCG+TGG + Chr3:2982890-2982909 MsG0380011647.01.T01:CDS 45.0%
! ATTCATCATTCGGCTTGCAG+TGG + Chr3:2981957-2981976 MsG0380011647.01.T01:CDS 45.0%
!! ACTCAGGTTGGTTGCATTCT+TGG + Chr3:2983597-2983616 MsG0380011647.01.T01:CDS 45.0%
!! CCTGCTTGATAAAGTGTTGG+TGG - Chr3:2981242-2981261 None:intergenic 45.0%
!! CGAGTTTTGACGATCGAATC+CGG - Chr3:2983139-2983158 None:intergenic 45.0%
!! CTTTTCTTATCTAGGAGCGC+AGG + Chr3:2983569-2983588 MsG0380011647.01.T01:intron 45.0%
!! GATTGGTGTTAGCACTAGAG+AGG + Chr3:2979632-2979651 MsG0380011647.01.T01:five_prime_UTR 45.0%
!! GCATTGTTGAGTGTCGGATT+TGG - Chr3:2983192-2983211 None:intergenic 45.0%
!! TATGTCATGGTGGATGGACA+GGG + Chr3:2981194-2981213 MsG0380011647.01.T01:intron 45.0%
!! TGGGACATGTTGATTTGTGG+TGG + Chr3:2979978-2979997 MsG0380011647.01.T01:intron 45.0%
!! TTATGTCATGGTGGATGGAC+AGG + Chr3:2981193-2981212 MsG0380011647.01.T01:intron 45.0%
!!! TAAAAATCATTTTTTTTTTT+AGG - Chr3:2978613-2978632 None:intergenic 5.0%
AAGGCTGTCACTCATGTCCT+AGG - Chr3:2980382-2980401 None:intergenic 50.0%
ACGAAGATATGTCCAGGGTG+TGG - Chr3:2981468-2981487 None:intergenic 50.0%
AGAACTGGCTATGAGCGCTT+TGG - Chr3:2980328-2980347 None:intergenic 50.0%
AGCTCTTCAGTGGTTGCATC+AGG - Chr3:2982700-2982719 None:intergenic 50.0%
AGGTATGCGATGACCTTCTC+TGG + Chr3:2979169-2979188 MsG0380011647.01.T01:intron 50.0%
ATCATTTGCAGGCCGTGAAG+CGG - Chr3:2983873-2983892 None:intergenic 50.0%
ATGCTGTACAGGACTTGCAG+CGG + Chr3:2984766-2984785 MsG0380011647.01.T01:CDS 50.0%
CCAAGATCGACCAGAAAGAC+AGG - Chr3:2982775-2982794 None:intergenic 50.0%
CCTTCGGCATTGTTGAGTGT+CGG - Chr3:2983198-2983217 None:intergenic 50.0%
GATCGAATCCGGCACTCATT+TGG - Chr3:2983128-2983147 None:intergenic 50.0%
GCAACCACTGAAGAGCTAAG+AGG + Chr3:2982703-2982722 MsG0380011647.01.T01:CDS 50.0%
GCTCCATCAACACCCTGATT+TGG - Chr3:2983623-2983642 None:intergenic 50.0%
GGCCTGCAAAAAGTGGCTTT+CGG - Chr3:2983044-2983063 None:intergenic 50.0%
GGTATGCGATGACCTTCTCT+GGG + Chr3:2979170-2979189 MsG0380011647.01.T01:intron 50.0%
GTAAGACTGCCAGGAGGAAA+TGG + Chr3:2983830-2983849 MsG0380011647.01.T01:CDS 50.0%
GTCGATCTAGAAAGAGGGTG+AGG - Chr3:2978520-2978539 None:intergenic 50.0%
TATATGGCGGCTTCATGGCA+TGG + Chr3:2982448-2982467 MsG0380011647.01.T01:CDS 50.0%
TCTTACACCAGTGGAAGGAG+CGG - Chr3:2983816-2983835 None:intergenic 50.0%
TGCAAGACACTCCATTGGTG+TGG + Chr3:2980875-2980894 MsG0380011647.01.T01:intron 50.0%
TGCTATGGCTGAGACTGTTC+GGG + Chr3:2983910-2983929 MsG0380011647.01.T01:CDS 50.0%
TGGCTAGAGATCGATTGGAG+CGG + Chr3:2981423-2981442 MsG0380011647.01.T01:CDS 50.0%
TGGTCCTTCTTATCGCATGC+AGG + Chr3:2980649-2980668 MsG0380011647.01.T01:intron 50.0%
! AAAGCGCTCATAGCCAGTTC+TGG + Chr3:2980327-2980346 MsG0380011647.01.T01:intron 50.0%
! AGCTCTGGCTAGAGATCGAT+TGG + Chr3:2981418-2981437 MsG0380011647.01.T01:CDS 50.0%
! CCCTCTTTCTAGATCGACTC+AGG + Chr3:2978522-2978541 MsG0380011647.01.T01:five_prime_UTR 50.0%
! CCTGTCTTTCTGGTCGATCT+TGG + Chr3:2982772-2982791 MsG0380011647.01.T01:intron 50.0%
! GCGTGTTTGAGATCGTGGTA+TGG + Chr3:2982895-2982914 MsG0380011647.01.T01:intron 50.0%
!! AATCAGGGTGTTGATGGAGC+TGG + Chr3:2983623-2983642 MsG0380011647.01.T01:CDS 50.0%
!! ACAATGCCGAAGGTGTTCCT+TGG + Chr3:2983205-2983224 MsG0380011647.01.T01:CDS 50.0%
!! AGTGTTGGTGGCACAATCAG+TGG - Chr3:2981230-2981249 None:intergenic 50.0%
!! ATGTCATGGTGGATGGACAG+GGG + Chr3:2981195-2981214 MsG0380011647.01.T01:intron 50.0%
!! GGTCGATCTTGGTGTCAGTT+GGG + Chr3:2982783-2982802 MsG0380011647.01.T01:intron 50.0%
!! TGGCCAAATCAGGGTGTTGA+TGG + Chr3:2983617-2983636 MsG0380011647.01.T01:CDS 50.0%
!! TGGTCGATCTTGGTGTCAGT+TGG + Chr3:2982782-2982801 MsG0380011647.01.T01:intron 50.0%
!! TTGCAGGCCATTTTGGTGCA+TGG + Chr3:2981912-2981931 MsG0380011647.01.T01:intron 50.0%
!!! GAAAGCCACTTTTTGCAGGC+CGG + Chr3:2983043-2983062 MsG0380011647.01.T01:CDS 50.0%
!!! TGCCGAAAGCCACTTTTTGC+AGG + Chr3:2983039-2983058 MsG0380011647.01.T01:CDS 50.0%
ACTGGTGTAAGACTGCCAGG+AGG + Chr3:2983824-2983843 MsG0380011647.01.T01:CDS 55.0%
AGACTGCCAGGAGGAAATGG+TGG + Chr3:2983833-2983852 MsG0380011647.01.T01:CDS 55.0%
AGAGGGTAGCTGAGTGATGG+TGG + Chr3:2979501-2979520 MsG0380011647.01.T01:five_prime_UTR 55.0%
CATCACTCAGCTACCCTCTC+AGG - Chr3:2979500-2979519 None:intergenic 55.0%
CCGACACTCAACAATGCCGA+AGG + Chr3:2983195-2983214 MsG0380011647.01.T01:CDS 55.0%
CTGAGAGGGTAGCTGAGTGA+TGG + Chr3:2979498-2979517 MsG0380011647.01.T01:five_prime_UTR 55.0%
CTTGCACGCCAAATGAGTGC+CGG + Chr3:2983117-2983136 MsG0380011647.01.T01:CDS 55.0%
GGCAGTCTTACACCAGTGGA+AGG - Chr3:2983821-2983840 None:intergenic 55.0%
TATGGCTGAGACTGTTCGGG+AGG + Chr3:2983913-2983932 MsG0380011647.01.T01:CDS 55.0%
TATGTCCAGGGTGTGGCAGA+TGG - Chr3:2981461-2981480 None:intergenic 55.0%
TCCACTGGTGTAAGACTGCC+AGG + Chr3:2983821-2983840 MsG0380011647.01.T01:CDS 55.0%
TCCTGGCAGTCTTACACCAG+TGG - Chr3:2983825-2983844 None:intergenic 55.0%
TTCCGCTAGTGGTCCAAGTC+AGG + Chr3:2983787-2983806 MsG0380011647.01.T01:CDS 55.0%
! ACTCTGCCCTCTGGTTCCAT+TGG + Chr3:2979545-2979564 MsG0380011647.01.T01:five_prime_UTR 55.0%
! CTTATCTAGGAGCGCAGGAC+TGG + Chr3:2983574-2983593 MsG0380011647.01.T01:intron 55.0%
!! AGGGTGAGGTAAGGAGCGTT+GGG - Chr3:2978506-2978525 None:intergenic 55.0%
!! ATGCCGAAGGTGTTCCTTGG+AGG + Chr3:2983208-2983227 MsG0380011647.01.T01:CDS 55.0%
CATCTCCATCTGCCACACCC+TGG + Chr3:2981453-2981472 MsG0380011647.01.T01:CDS 60.0%
CCACTAGCGGAAGCCTGAGA+AGG - Chr3:2983779-2983798 None:intergenic 60.0%
CCTTCTCAGGCTTCCGCTAG+TGG + Chr3:2983776-2983795 MsG0380011647.01.T01:CDS 60.0%
TCAGGCCGGCCTGCAAAAAG+TGG - Chr3:2983051-2983070 None:intergenic 60.0%
! GAGGGTGAGGTAAGGAGCGT+TGG - Chr3:2978507-2978526 None:intergenic 60.0%
!! CGCCTGACTTGGACCACTAG+CGG - Chr3:2983792-2983811 None:intergenic 60.0%
!! GGGTGAGGTAAGGAGCGTTG+GGG - Chr3:2978505-2978524 None:intergenic 60.0%
GAAGGAGCGGTCGCCTGACT+TGG - Chr3:2983803-2983822 None:intergenic 65.0%
GCGCAGGACTGGACTCAGGT+TGG + Chr3:2983585-2983604 MsG0380011647.01.T01:CDS 65.0%
! AGGAGCGCAGGACTGGACTC+AGG + Chr3:2983581-2983600 MsG0380011647.01.T01:intron 65.0%
CAGGCGACCGCTCCTTCCAC+TGG + Chr3:2983806-2983825 MsG0380011647.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 2978407 2984833 2978407 ID=MsG0380011647.01;Name=MsG0380011647.01
Chr3 mRNA 2978407 2984833 2978407 ID=MsG0380011647.01.T01;Parent=MsG0380011647.01;Name=MsG0380011647.01.T01;_AED=0.49;_eAED=0.50;_QI=335|0.81|0.91|1|0.90|0.83|12|0|580
Chr3 exon 2978407 2978543 2978407 ID=MsG0380011647.01.T01:exon:1621;Parent=MsG0380011647.01.T01
Chr3 exon 2979475 2979912 2979475 ID=MsG0380011647.01.T01:exon:1622;Parent=MsG0380011647.01.T01
Chr3 exon 2981215 2981301 2981215 ID=MsG0380011647.01.T01:exon:1623;Parent=MsG0380011647.01.T01
Chr3 exon 2981410 2981531 2981410 ID=MsG0380011647.01.T01:exon:1624;Parent=MsG0380011647.01.T01
Chr3 exon 2981730 2981826 2981730 ID=MsG0380011647.01.T01:exon:1625;Parent=MsG0380011647.01.T01
Chr3 exon 2981918 2982023 2981918 ID=MsG0380011647.01.T01:exon:1626;Parent=MsG0380011647.01.T01
Chr3 exon 2982354 2982511 2982354 ID=MsG0380011647.01.T01:exon:1627;Parent=MsG0380011647.01.T01
Chr3 exon 2982616 2982753 2982616 ID=MsG0380011647.01.T01:exon:1628;Parent=MsG0380011647.01.T01
Chr3 exon 2982844 2982911 2982844 ID=MsG0380011647.01.T01:exon:1629;Parent=MsG0380011647.01.T01
Chr3 exon 2982999 2983229 2982999 ID=MsG0380011647.01.T01:exon:1630;Parent=MsG0380011647.01.T01
Chr3 exon 2983583 2983970 2983583 ID=MsG0380011647.01.T01:exon:1631;Parent=MsG0380011647.01.T01
Chr3 exon 2984726 2984833 2984726 ID=MsG0380011647.01.T01:exon:1632;Parent=MsG0380011647.01.T01
Chr3 five_prime_UTR 2978407 2978543 2978407 ID=MsG0380011647.01.T01:five_prime_utr;Parent=MsG0380011647.01.T01
Chr3 five_prime_UTR 2979475 2979672 2979475 ID=MsG0380011647.01.T01:five_prime_utr;Parent=MsG0380011647.01.T01
Chr3 CDS 2979673 2979912 2979673 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2981215 2981301 2981215 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2981410 2981531 2981410 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2981730 2981826 2981730 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2981918 2982023 2981918 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2982354 2982511 2982354 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2982616 2982753 2982616 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2982844 2982911 2982844 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2982999 2983229 2982999 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2983583 2983970 2983583 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Chr3 CDS 2984726 2984833 2984726 ID=MsG0380011647.01.T01:cds;Parent=MsG0380011647.01.T01
Gene Sequence

>MsG0380011647.01.T01

ATGGCTGTGAAGTTTATAGCAATTTCGGCGGTTTCTACGGTGTTAAGTTTTGTAGGTCTTCAGTTTTGCACAGATTTGTCATTAGAGAAACTTAAATCAGATGGACTAATTGGCTGGAATTCAATTCACTTGGACAATGTCGACCATGACATTGAGTTACCTTTGGGTTTGTATACCACCATAGGGTTATTGACGAATTGTATGATCAATGTATTCGTCCTTCTTAATCTTAGTCTCAAGGGGACATTTCTTCCACTGATTGTGCCACCAACACTTTATCAAGCAGGTCTTTGGTCAACTTGGTTGGCCGTACTTTGTTCTTTAAAGATGTTTCAAGCTCTGGCTAGAGATCGATTGGAGCGGCTGAATGCATCTCCATCTGCCACACCCTGGACATATCTTCGTGTATATTCAGCATTGTTATTCATTTTCTTGGTTGATGTTCTCTGGATAAGGCTTTGTCTTGAAATATATAGCACACATGGGTCCTCTATGTTCCTGTTACTTTTCTTTGAGCCTTTGAGTATTGCTTTCGAGACACTGCAGGCCATTTTGGTGCATGGATTTCAGTTACTTGACATATGGATTCATCATTCGGCTTGCAGTGGCAGTGATTTCCGAACAACTAAACTGCTTGATACATTAACCGCAGGTTCTTTATTGGAATGGAAGGGAATACTTATCCGGAACTTGGGATTTTTCCTAGATATGGCCACATTTTTTATGGCACTTGGTCATTACTTGTATATATGGCGGCTTCATGGCATGGCTTTCCATCTTGTAGATGCAGTGCTATTTCTAAATATACGTGCGTTACTTAGTGCAATGATAAACCGCATAAAAGGCTTTATTAGACTAAGGATAGCTCTAGGAGCACTTCATGCAGCTCTTCCTGATGCAACCACTGAAGAGCTAAGAGGATATGAAGATGAATGTGCTATTTGTAGAGAACCTATGGCTAAGGCTAAAAAGCTAAACTGCAATCACCTCTTCCATCTTGCGTGTTTGAGATCGTGGTTGGATCAAGGCCTGACTGAGATGTATACTTGTCCAACATGCCGAAAGCCACTTTTTGCAGGCCGGCCTGAAAATGAAACAAACTCTAGTACAGGGGTAATATCTAGTGATGAGCAACTTGCACGCCAAATGAGTGCCGGATTCGATCGTCAAAACTCGGCTAGACATAACATGCCTACAGGATTGTTTCCAAATCCGACACTCAACAATGCCGAAGGTGTTCCTTGGAGGAGCGCAGGACTGGACTCAGGTTGGTTGCATTCTTGGCCAAATCAGGGTGTTGATGGAGCTGGTCCATCTACTGCTATCAGAACAGTAGGTCTCGGGAGAGTTCAAATGATGATGAGACATCTTGCATCTGTCGGAGAAACCTATGCTCAGACAACCTTTGATGATGCTTCTTGGAACCTTTGGCCTATTAATCCTTCTCAGGCTTCCGCTAGTGGTCCAAGTCAGGCGACCGCTCCTTCCACTGGTGTAAGACTGCCAGGAGGAAATGGTGGTTTACATATAAGGACCGCTTCACGGCCTGCAAATGATAATTTAGCAAATGTGCTTGCTATGGCTGAGACTGTTCGGGAGGTTCTACCTCATATTCCGGACGACATAATATTCCAGAAAAATGAATGCCTGATATATATTGAATCTAAAGCTTTTGATGCTGTACAGGACTTGCAGCGGACAAATTCTGTTACAGTTACTGTGAATAATCTTCTCCAAATGTGA
Protein sequence

>MsG0380011647.01.T01

MAVKFIAISAVSTVLSFVGLQFCTDLSLEKLKSDGLIGWNSIHLDNVDHDIELPLGLYTTIGLLTNCMINVFVLLNLSLKGTFLPLIVPPTLYQAGLWSTWLAVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLFIFLVDVLWIRLCLEIYSTHGSSMFLLLFFEPLSIAFETLQAILVHGFQLLDIWIHHSACSGSDFRTTKLLDTLTAGSLLEWKGILIRNLGFFLDMATFFMALGHYLYIWRLHGMAFHLVDAVLFLNIRALLSAMINRIKGFIRLRIALGALHAALPDATTEELRGYEDECAICREPMAKAKKLNCNHLFHLACLRSWLDQGLTEMYTCPTCRKPLFAGRPENETNSSTGVISSDEQLARQMSAGFDRQNSARHNMPTGLFPNPTLNNAEGVPWRSAGLDSGWLHSWPNQGVDGAGPSTAIRTVGLGRVQMMMRHLASVGETYAQTTFDDASWNLWPINPSQASASGPSQATAPSTGVRLPGGNGGLHIRTASRPANDNLANVLAMAETVREVLPHIPDDIIFQKNECLIYIESKAFDAVQDLQRTNSVTVTVNNLLQM*