AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000856.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000856.01.T01 MTR_1g007150 93.697 714 7 5 1 706 1 684 0.0 1372
MsG0180000856.01.T01 MTR_3g110240 79.970 659 95 6 52 706 56 681 0.0 1098
MsG0180000856.01.T01 MTR_7g006030 76.244 623 115 3 89 705 3 598 0.0 1013
MsG0180000856.01.T01 MTR_1g116210 69.527 676 173 4 34 705 29 675 0.0 985
MsG0180000856.01.T01 MTR_7g085540 72.033 615 141 2 96 705 119 707 0.0 947
MsG0180000856.01.T01 MTR_8g014050 73.151 622 132 4 93 706 97 691 0.0 935
MsG0180000856.01.T01 MTR_4g126010 38.828 273 156 5 124 393 9 273 1.17e-58 205
MsG0180000856.01.T01 MTR_2g099670 38.828 273 156 5 124 393 9 273 1.90e-58 205
MsG0180000856.01.T01 MTR_2g039930 38.462 273 157 5 124 393 9 273 2.82e-57 202
MsG0180000856.01.T01 MTR_1g075870 38.710 279 158 6 118 393 6 274 3.36e-56 195
MsG0180000856.01.T01 MTR_8g018310 37.828 267 154 6 124 387 9 266 7.59e-56 198
MsG0180000856.01.T01 MTR_7g097160 38.095 273 158 5 124 393 9 273 1.04e-55 197
MsG0180000856.01.T01 MTR_8g018310 37.828 267 154 6 124 387 9 266 1.38e-55 196
MsG0180000856.01.T01 MTR_1g042280 37.634 279 161 6 118 393 6 274 1.86e-55 197
MsG0180000856.01.T01 MTR_1g075870 38.710 279 158 6 118 393 6 274 2.02e-55 197
MsG0180000856.01.T01 MTR_1g069720 37.634 279 161 6 118 393 5 273 4.93e-54 192
MsG0180000856.01.T01 MTR_1g004990 37.456 283 163 7 114 393 2 273 1.00e-53 191
MsG0180000856.01.T01 MTR_6g087070 37.363 273 160 5 124 393 9 273 1.28e-53 191
MsG0180000856.01.T01 MTR_8g102930 37.276 279 162 6 118 393 5 273 5.00e-53 189
MsG0180000856.01.T01 MTR_3g110180 36.201 279 165 6 118 393 5 273 2.99e-52 187
MsG0180000856.01.T01 MTR_0492s0030 37.102 283 163 6 116 393 3 275 3.53e-52 185
MsG0180000856.01.T01 MTR_0543s0020 37.102 283 163 6 116 393 3 275 3.53e-52 185
MsG0180000856.01.T01 MTR_3g110180 36.201 279 164 7 118 393 5 272 1.32e-50 182
MsG0180000856.01.T01 MTR_1g042280 39.381 226 131 3 171 393 20 242 7.50e-50 177
MsG0180000856.01.T01 MTR_2g099670 39.437 213 123 3 184 393 12 221 4.16e-47 172
MsG0180000856.01.T01 MTR_1g075870 39.269 219 127 3 178 393 2 217 1.35e-46 167
MsG0180000856.01.T01 MTR_2g039930 38.974 195 113 3 202 393 1 192 1.12e-40 154
MsG0180000856.01.T01 MTR_1g116205 76.316 76 17 1 102 176 97 172 8.47e-34 127
MsG0180000856.01.T01 MTR_7g097160 41.985 131 72 2 266 393 25 154 2.11e-26 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000856.01.T01 AT2G25760 72.639 720 133 10 3 706 2 673 0.0 1071
MsG0180000856.01.T01 AT2G25760 72.061 723 135 11 3 706 2 676 0.0 1061
MsG0180000856.01.T01 AT3G13670 73.089 628 129 4 89 706 106 703 0.0 976
MsG0180000856.01.T01 AT3G03940 64.583 720 206 6 6 705 10 700 0.0 954
MsG0180000856.01.T01 AT5G18190 69.524 630 159 3 81 705 89 690 0.0 938
MsG0180000856.01.T01 AT5G18190 69.524 630 159 3 81 705 89 690 0.0 938
MsG0180000856.01.T01 AT3G03930 64.286 266 69 1 440 705 48 287 1.32e-117 354
MsG0180000856.01.T01 AT2G19470 38.828 273 156 5 124 393 9 273 4.96e-58 203
MsG0180000856.01.T01 AT5G57015 38.095 273 158 5 124 393 9 273 1.44e-57 202
MsG0180000856.01.T01 AT4G26100 38.095 273 158 5 124 393 9 273 1.49e-57 202
MsG0180000856.01.T01 AT3G23340 38.710 279 158 6 118 393 5 273 1.60e-57 202
MsG0180000856.01.T01 AT4G14340 38.710 279 158 6 118 393 11 279 9.58e-57 197
MsG0180000856.01.T01 AT1G03930 37.993 279 160 6 118 393 5 273 1.59e-56 200
MsG0180000856.01.T01 AT4G14340 38.710 279 158 6 118 393 11 279 2.25e-56 199
MsG0180000856.01.T01 AT1G72710 38.462 273 156 6 124 393 9 272 8.81e-56 197
MsG0180000856.01.T01 AT5G44100 36.918 279 163 6 118 393 5 273 2.33e-55 197
MsG0180000856.01.T01 AT5G44100 36.918 279 163 6 118 393 5 273 2.33e-55 197
MsG0180000856.01.T01 AT4G28540 37.276 279 162 6 118 393 9 277 3.10e-55 197
MsG0180000856.01.T01 AT5G43320 37.276 279 162 6 118 393 5 273 1.09e-53 192
MsG0180000856.01.T01 AT4G28880 37.276 279 162 6 118 393 5 273 1.51e-53 190
MsG0180000856.01.T01 AT4G28880 37.276 279 162 6 118 393 5 273 1.51e-53 190
MsG0180000856.01.T01 AT4G28880 37.276 279 162 6 118 393 5 273 1.51e-53 190
MsG0180000856.01.T01 AT4G28880 37.276 279 162 6 118 393 5 273 1.51e-53 190
MsG0180000856.01.T01 AT4G28860 37.276 279 162 6 118 393 5 273 2.52e-53 189
MsG0180000856.01.T01 AT5G43320 37.276 279 162 6 118 393 5 273 3.31e-53 188
MsG0180000856.01.T01 AT5G43320 37.276 279 162 6 118 393 5 273 3.31e-53 188
MsG0180000856.01.T01 AT4G28860 37.276 279 162 6 118 393 5 273 4.92e-53 189
MsG0180000856.01.T01 AT1G04440 36.559 279 164 6 118 393 5 273 1.32e-52 189
MsG0180000856.01.T01 AT3G23340 38.314 261 150 5 136 393 7 259 3.95e-51 184
MsG0180000856.01.T01 AT4G08800 33.333 273 139 6 124 393 9 241 7.70e-42 154

Find 185 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAGCACCGTCGGTGTTTA+TGG 0.131198 1:+12156895 None:intergenic
GATATATATTTGGCATAATT+TGG 0.158062 1:+12156959 None:intergenic
CCCATTCTGACTTTCTTCTT+TGG 0.171287 1:+12156718 None:intergenic
CTCACGTGCCGGAACAAATT+AGG 0.172612 1:-12159741 MsG0180000856.01.T01:CDS
ATATTCTTGGCCCTAGTTTA+TGG 0.174994 1:-12158281 MsG0180000856.01.T01:CDS
AGGAGGCATGTTAATCTTTA+AGG 0.188962 1:+12159960 None:intergenic
TAACCTTTGGGCACTGATTA+TGG 0.191586 1:-12156464 MsG0180000856.01.T01:CDS
ATCGAAAAGTGATATATATT+TGG 0.208565 1:+12156949 None:intergenic
AAATGATTCACTGACCTTAT+AGG 0.232158 1:+12155952 None:intergenic
AGAATGCATCTTCTCTAATA+TGG 0.254263 1:+12158078 None:intergenic
CTACCTCGTGTAGCGGGTTC+GGG 0.258671 1:+12159871 None:intergenic
ACCAGTAAAGGGTGTAATTA+TGG 0.259169 1:-12158580 MsG0180000856.01.T01:CDS
TTCTGATAAGCAAGAGATTA+TGG 0.259548 1:-12159716 MsG0180000856.01.T01:CDS
TAGGTTGTTGTTCTAACCTT+TGG 0.265781 1:-12156477 MsG0180000856.01.T01:CDS
TCCATAATTACACCCTTTAC+TGG 0.271957 1:+12158579 None:intergenic
TCGGGTTTAGCGATCGGGTT+CGG 0.281544 1:+12159889 None:intergenic
TCTTGTTTGCAAGAAGAAAA+TGG 0.283561 1:-12157071 MsG0180000856.01.T01:CDS
GCCCTAGTTTATGGGATGTT+TGG 0.283968 1:-12158272 MsG0180000856.01.T01:CDS
GAAGAAAACCTTTGCTTCAT+AGG 0.289095 1:+12156652 None:intergenic
TTGTTTGTATGTAGTGTATT+AGG 0.289760 1:-12158463 MsG0180000856.01.T01:intron
ATGGGTCTAATGTCTGGATT+TGG 0.294234 1:+12156914 None:intergenic
TTTCTGGTTGATCTTGGTTT+AGG 0.301281 1:-12157590 MsG0180000856.01.T01:intron
TGAGCACCGTCGGTGTTTAT+GGG 0.307946 1:+12156896 None:intergenic
TCTACCTCGTGTAGCGGGTT+CGG 0.313908 1:+12159870 None:intergenic
TATTCTTGGCCCTAGTTTAT+GGG 0.314228 1:-12158280 MsG0180000856.01.T01:CDS
CGGGTTTAGCGATCGGGTTC+GGG 0.318336 1:+12159890 None:intergenic
TCACGTGCCGGAACAAATTA+GGG 0.325179 1:-12159740 MsG0180000856.01.T01:CDS
AAGCTAGGGAAAGGAGGTTT+TGG 0.342457 1:-12159442 MsG0180000856.01.T01:CDS
ATCAACGTCCAGATGTATTT+AGG 0.344411 1:-12157413 MsG0180000856.01.T01:intron
ACACTAATCCATTGTGTTGC+TGG 0.346898 1:+12156691 None:intergenic
ACTCCATGAAACACTCTTCA+TGG 0.346925 1:-12159988 MsG0180000856.01.T01:five_prime_UTR
TTGCAGGTCATGGATATTCT+TGG 0.355219 1:-12158294 MsG0180000856.01.T01:intron
AGGTTGTTGTTCTAACCTTT+GGG 0.362175 1:-12156476 MsG0180000856.01.T01:CDS
TGGCCACTGCTGGAAGTAGA+TGG 0.368491 1:-12155877 MsG0180000856.01.T01:CDS
CTTTAGGATGTCTGCTGAAA+TGG 0.375494 1:-12158128 MsG0180000856.01.T01:intron
TTCTTCGCGGACGGCTACCC+TGG 0.381224 1:-12157202 MsG0180000856.01.T01:CDS
TCAGAAACCCTAATTTGTTC+CGG 0.382437 1:+12159733 None:intergenic
ATAGGATTGCTGCAAGTATT+GGG 0.382481 1:+12155970 None:intergenic
TATAGGATTGCTGCAAGTAT+TGG 0.382981 1:+12155969 None:intergenic
AGGTAGCAGAAGAGATGATT+TGG 0.392165 1:-12157252 MsG0180000856.01.T01:CDS
TAGCTGCAGGGTGAAAATAA+AGG 0.408921 1:-12157097 MsG0180000856.01.T01:intron
GGGAGAACCGCAGCTGATAA+AGG 0.410075 1:-12159670 MsG0180000856.01.T01:CDS
GTGTTTATGGGTCTAATGTC+TGG 0.411174 1:+12156908 None:intergenic
CGGGTTCGGGTTTAGCGATC+GGG 0.416775 1:+12159884 None:intergenic
TTCATGATTAAAGAAGACTA+TGG 0.420011 1:+12155506 None:intergenic
GTTTATGTTGGTCGTCGTAT+TGG 0.427782 1:-12159415 MsG0180000856.01.T01:CDS
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 1:-12155851 MsG0180000856.01.T01:CDS
ATACTTGCAGCAATCCTATA+AGG 0.432661 1:-12155966 MsG0180000856.01.T01:CDS
CTGATTATGGATGCCGGCAC+TGG 0.434575 1:-12156451 MsG0180000856.01.T01:CDS
ACAAGTTACCTAAATACATC+TGG 0.436822 1:+12157405 None:intergenic
CTCCCTTCATCTTCAGCAAC+CGG 0.439789 1:+12159646 None:intergenic
ACGTGCAGCGGCGGCGGCGA+TGG 0.440494 1:+12159816 None:intergenic
TATATTGCATCTATTTGTTA+CGG 0.443891 1:-12155435 MsG0180000856.01.T01:CDS
TATGACCTGGTATCCTTGCC+AGG 0.447271 1:+12157184 None:intergenic
CGTCGTATTGGTGCCGGAGC+CGG 0.448238 1:-12159403 MsG0180000856.01.T01:CDS
GCTCCATGAAGAGTGTTTCA+TGG 0.448600 1:+12159985 None:intergenic
ACAAGGGACGGCAAGGTGAT+TGG 0.451632 1:-12158411 MsG0180000856.01.T01:CDS
CGGCGGCGATGGTGTTGTTA+CGG 0.451967 1:+12159827 None:intergenic
GCGGGTTCGGGTTTAGCGAT+CGG 0.452422 1:+12159883 None:intergenic
TTGATCACGTGCAGCGGCGG+CGG 0.456771 1:+12159810 None:intergenic
TGGACCTCCTTATGAGTGGC+AGG 0.458909 1:-12158560 MsG0180000856.01.T01:CDS
GCCATAGCAGGATCTAATAG+TGG 0.459499 1:-12156180 MsG0180000856.01.T01:CDS
TTTGAGCATAAAACCAGTAA+AGG 0.460416 1:-12158592 MsG0180000856.01.T01:CDS
TTTACCTTGACATGAGTACT+AGG 0.461394 1:+12155552 None:intergenic
GGGTTATTTATCAGTAGTGT+AGG 0.469943 1:-12156496 MsG0180000856.01.T01:CDS
AACTCAATAAACTGCCGAAA+AGG 0.471641 1:+12157010 None:intergenic
ATCGAAAAGGGATATGAAGA+TGG 0.473461 1:-12156517 MsG0180000856.01.T01:CDS
TCGGCAGTTTATTGAGTTCG+TGG 0.473854 1:-12157005 MsG0180000856.01.T01:CDS
TACAGAGTAGATAGGAAGCT+AGG 0.474012 1:-12159457 MsG0180000856.01.T01:CDS
CTCATCCTTCTTCCTTCACA+AGG 0.477955 1:-12156404 MsG0180000856.01.T01:intron
CTCATCATCATCTCCTTCCA+TGG 0.479092 1:+12156744 None:intergenic
GTCACTGCTATGGCCACTGC+TGG 0.481033 1:-12155887 MsG0180000856.01.T01:CDS
GCCAAAGAAGAAAGTCAGAA+TGG 0.481635 1:-12156719 MsG0180000856.01.T01:CDS
TTGTAAACCTGCCACTCATA+AGG 0.483917 1:+12158553 None:intergenic
AACAAATAGATGCAATATAG+AGG 0.484055 1:+12155439 None:intergenic
TTGAGCATAAAACCAGTAAA+GGG 0.485067 1:-12158591 MsG0180000856.01.T01:CDS
GTGAATCATTTCCATTCAAG+TGG 0.485946 1:-12155940 MsG0180000856.01.T01:CDS
AGGGTAGCCGTCCGCGAAGA+AGG 0.489461 1:+12157204 None:intergenic
AACAACCTTGTGAAGGAAGA+AGG 0.492459 1:+12156399 None:intergenic
GTTGTCCCAACACATCGAAA+AGG 0.495024 1:-12156530 MsG0180000856.01.T01:CDS
GTGCAACAGGTTCAGGTGGG+TGG 0.497947 1:-12159490 MsG0180000856.01.T01:intron
GATAGGAAGCTAGGGAAAGG+AGG 0.498291 1:-12159448 MsG0180000856.01.T01:CDS
TACCTCAACAGCACCGGCTC+CGG 0.498945 1:+12159390 None:intergenic
GATGACTGTGATAGCGGCGG+TGG 0.500267 1:-12159691 MsG0180000856.01.T01:CDS
GGTCCGGTTGCTGAAGATGA+AGG 0.507097 1:-12159649 MsG0180000856.01.T01:CDS
TAGAACCGACGCAGATGGAG+AGG 0.508000 1:+12160081 None:intergenic
AGGAATGGATTATGGAACAG+TGG 0.508088 1:-12156224 MsG0180000856.01.T01:CDS
GCTAGTGTACATGCTCATCT+TGG 0.512428 1:-12157281 MsG0180000856.01.T01:CDS
TATTACATTAGTGCCATAGC+AGG 0.514536 1:-12156192 MsG0180000856.01.T01:CDS
GTTGGTCGTCGTATTGGTGC+CGG 0.516374 1:-12159409 MsG0180000856.01.T01:CDS
ATCTGAAAATCCAGCACCAC+GGG 0.518126 1:+12155841 None:intergenic
TTCCAAACATCCCATAAACT+AGG 0.518224 1:+12158270 None:intergenic
GTTTCTTGAGTTTCATCAGT+CGG 0.518437 1:+12155594 None:intergenic
CCTCTTCTACCTCGTGTAGC+GGG 0.519563 1:+12159865 None:intergenic
TCGTTGGTTGTAATGTCAAA+AGG 0.520574 1:-12156153 MsG0180000856.01.T01:intron
CATGCTCATCTTGGTAGGAC+AGG 0.525496 1:-12157272 MsG0180000856.01.T01:CDS
CCAAAGAAGAAAGTCAGAAT+GGG 0.530872 1:-12156718 MsG0180000856.01.T01:CDS
AACCGCAGCTGATAAAGGTC+CGG 0.531660 1:-12159665 MsG0180000856.01.T01:CDS
GAGAATAGAACCGACGCAGA+TGG 0.533722 1:+12160076 None:intergenic
ATAAACTGCCGAAAAGGTGC+GGG 0.538646 1:+12157016 None:intergenic
TTTGCCATGCAGCAACTCGT+TGG 0.539312 1:-12157470 MsG0180000856.01.T01:intron
TTGTCCCAACACATCGAAAA+GGG 0.539526 1:-12156529 MsG0180000856.01.T01:CDS
AAAACCTTTGCTTCATAGGT+CGG 0.541274 1:+12156656 None:intergenic
TTCACCCTCTCCATCTGCGT+CGG 0.541620 1:-12160086 MsG0180000856.01.T01:five_prime_UTR
CGCGGACGGCTACCCTGGCA+AGG 0.543822 1:-12157197 MsG0180000856.01.T01:CDS
CACCGATGTACAGAGTAGAT+AGG 0.545760 1:-12159465 MsG0180000856.01.T01:CDS
ACAGAGTAGATAGGAAGCTA+GGG 0.546436 1:-12159456 MsG0180000856.01.T01:CDS
CGTCCCTTGTAATGAACTCG+TGG 0.549783 1:+12158424 None:intergenic
AAACACCGACGGTGCTCAGA+AGG 0.551158 1:-12156891 MsG0180000856.01.T01:intron
GCTACCCTGGCAAGGATACC+AGG 0.551712 1:-12157189 MsG0180000856.01.T01:intron
GTGAAGGTATTCATCGAAGG+TGG 0.556433 1:-12155695 MsG0180000856.01.T01:CDS
AAACGAACAACCTCACGTGC+CGG 0.557745 1:-12159752 MsG0180000856.01.T01:CDS
GCATATCAGCAACATTGTAA+TGG 0.559923 1:+12156554 None:intergenic
CCCGCTACACGAGGTAGAAG+AGG 0.561644 1:-12159865 MsG0180000856.01.T01:CDS
TTTGTATGTAGTGTATTAGG+AGG 0.562063 1:-12158460 MsG0180000856.01.T01:intron
TCCAAACATCCCATAAACTA+GGG 0.562426 1:+12158271 None:intergenic
ACCTCTTCTACCTCGTGTAG+CGG 0.562642 1:+12159864 None:intergenic
GGAATGGATTATGGAACAGT+GGG 0.563150 1:-12156223 MsG0180000856.01.T01:CDS
TGCCGGAGCCGGTGCTGTTG+AGG 0.563693 1:-12159392 MsG0180000856.01.T01:intron
CACGAGTTCATTACAAGGGA+CGG 0.566096 1:-12158423 MsG0180000856.01.T01:CDS
GCCGAAAAGGTGCGGGACAG+AGG 0.569844 1:+12157023 None:intergenic
TGGGCACTGATTATGGATGC+CGG 0.570860 1:-12156457 MsG0180000856.01.T01:CDS
ATCTAATAGTGGGAGCTCGT+TGG 0.570915 1:-12156169 MsG0180000856.01.T01:CDS
GGCCACTGCTGGAAGTAGAT+GGG 0.571298 1:-12155876 MsG0180000856.01.T01:CDS
CTTCGATGAATACCTTCACT+AGG 0.572280 1:+12155699 None:intergenic
AGAGGACGGTTGACCATGGA+AGG 0.574941 1:-12156757 MsG0180000856.01.T01:CDS
CTATCATACCTCAACAGCAC+CGG 0.575452 1:+12159384 None:intergenic
CTAATTTGTTCCGGCACGTG+AGG 0.575786 1:+12159742 None:intergenic
TCGAAAAGGGATATGAAGAT+GGG 0.578550 1:-12156516 MsG0180000856.01.T01:CDS
CGTTGGCGTGATAATTCGAC+TGG 0.587524 1:-12157453 MsG0180000856.01.T01:CDS
GCAAGGTGATTGGTATGTCA+TGG 0.589006 1:-12158401 MsG0180000856.01.T01:intron
AACTGCTGCTACATATGACC+AGG 0.592537 1:-12155649 MsG0180000856.01.T01:CDS
CTGGAAGATTCGAACGACGA+CGG 0.594413 1:+12160018 None:intergenic
TACTTGATCACGTGCAGCGG+CGG 0.595072 1:+12159807 None:intergenic
AACCGGACCTTTATCAGCTG+CGG 0.595722 1:+12159663 None:intergenic
AATAAACTGCCGAAAAGGTG+CGG 0.597388 1:+12157015 None:intergenic
GTGTACATGCTCATCTTGGT+AGG 0.600986 1:-12157277 MsG0180000856.01.T01:CDS
GTCCGGTTGCTGAAGATGAA+GGG 0.607367 1:-12159648 MsG0180000856.01.T01:CDS
TACTAAGTACAAGAGCAGCC+TGG 0.608490 1:+12155631 None:intergenic
CTTTCCTAGTACTCATGTCA+AGG 0.608784 1:-12155556 MsG0180000856.01.T01:CDS
GTAGATAGGAAGCTAGGGAA+AGG 0.610159 1:-12159451 MsG0180000856.01.T01:CDS
TTGTGCAGTGAAACCAGTGC+CGG 0.610323 1:+12156438 None:intergenic
TGCCCATCTACTTCCAGCAG+TGG 0.611695 1:+12155874 None:intergenic
CCATAGCAGGATCTAATAGT+GGG 0.612424 1:-12156179 MsG0180000856.01.T01:CDS
CCCACTATTAGATCCTGCTA+TGG 0.617210 1:+12156179 None:intergenic
CACGCCGACCTATGAAGCAA+AGG 0.618216 1:-12156660 MsG0180000856.01.T01:intron
TTTCTGGTTCGAAGTTGAGG+AGG 0.618261 1:+12159943 None:intergenic
TCTCTTCATGAGTTCCCGGA+GGG 0.618779 1:+12157621 None:intergenic
GTTCATTACAAGGGACGGCA+AGG 0.622003 1:-12158418 MsG0180000856.01.T01:CDS
TATCAGGTTGGACAGAAGAG+AGG 0.622077 1:-12156775 MsG0180000856.01.T01:intron
GAAGAGAGGACGGTTGACCA+TGG 0.624209 1:-12156761 MsG0180000856.01.T01:CDS
TTGTACTTGATCACGTGCAG+CGG 0.625961 1:+12159804 None:intergenic
TGAAGGTATTCATCGAAGGT+GGG 0.628022 1:-12155694 MsG0180000856.01.T01:CDS
TTCTCTTCATGAGTTCCCGG+AGG 0.630312 1:+12157620 None:intergenic
TTCCTATCTACTCTGTACAT+CGG 0.632869 1:+12159463 None:intergenic
TGGGAATGCCAGCAACACAA+TGG 0.633757 1:-12156699 MsG0180000856.01.T01:CDS
CTAGTGAAGGTATTCATCGA+AGG 0.635960 1:-12155698 MsG0180000856.01.T01:CDS
TAGAGAAGATGCATTCTAGA+GGG 0.637214 1:-12158072 MsG0180000856.01.T01:intron
TTTGTGCAACAGGTTCAGGT+GGG 0.638924 1:-12159493 MsG0180000856.01.T01:intron
AGAACCGACGCAGATGGAGA+GGG 0.642887 1:+12160082 None:intergenic
ATGACCTGGTATCCTTGCCA+GGG 0.644585 1:+12157185 None:intergenic
TTAGAGAAGATGCATTCTAG+AGG 0.645638 1:-12158073 MsG0180000856.01.T01:CDS
ATTCATCGAAGGTGGGACAA+TGG 0.646078 1:-12155687 MsG0180000856.01.T01:CDS
TGGGCAATTGTTATGTCCCG+TGG 0.648130 1:-12155857 MsG0180000856.01.T01:CDS
TGTCCCACGAGTTCATTACA+AGG 0.652591 1:-12158428 MsG0180000856.01.T01:CDS
AATGAACTCGTGGGACACCA+TGG 0.653940 1:+12158434 None:intergenic
CATCCATAATCAGTGCCCAA+AGG 0.657903 1:+12156461 None:intergenic
TAGTACCTTCTGAGCACCGT+CGG 0.662057 1:+12156886 None:intergenic
ATTATGGACCTCCTTATGAG+TGG 0.663753 1:-12158564 MsG0180000856.01.T01:CDS
TAAACCTGCCACTCATAAGG+AGG 0.664178 1:+12158556 None:intergenic
ATGACTGTGATAGCGGCGGT+GGG 0.665147 1:-12159690 MsG0180000856.01.T01:CDS
GGTGTCGTGTATAGCAATCG+AGG 0.667047 1:-12158107 MsG0180000856.01.T01:CDS
AGTGTATTAGGAGGTAGCCA+TGG 0.671950 1:-12158451 MsG0180000856.01.T01:CDS
GATCTGAAAATCCAGCACCA+CGG 0.671996 1:+12155840 None:intergenic
ATTTGTTTCAGATACGTGCA+TGG 0.673109 1:-12157674 MsG0180000856.01.T01:intron
GTCCCTTGTAATGAACTCGT+GGG 0.673497 1:+12158425 None:intergenic
ATTACAATGTTGCTGATATG+CGG 0.677018 1:-12156552 MsG0180000856.01.T01:CDS
ATGGATGATGACTGTGATAG+CGG 0.678914 1:-12159697 MsG0180000856.01.T01:CDS
AGGTTGGACAGAAGAGAGGA+CGG 0.682501 1:-12156771 MsG0180000856.01.T01:CDS
GTCCCACGAGTTCATTACAA+GGG 0.693718 1:-12158427 MsG0180000856.01.T01:CDS
TAGCAGCAGTTGAAGTAATG+CGG 0.693804 1:+12155661 None:intergenic
ATTAGACCCATAAACACCGA+CGG 0.702909 1:-12156902 MsG0180000856.01.T01:CDS
AAACCCGAACCCGCTACACG+AGG 0.720713 1:-12159874 MsG0180000856.01.T01:CDS
GATGATGACTGTGATAGCGG+CGG 0.731600 1:-12159694 MsG0180000856.01.T01:CDS
GGACACAGCACAATCAACTG+CGG 0.760952 1:+12155527 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAAATTTACTTTTTC+AGG + Chr1:12155948-12155967 None:intergenic 10.0%
!!! TAATTTGATTTTTTTTTCAT+TGG - Chr1:12155429-12155448 MsG0180000856.01.T01:CDS 10.0%
!! ATTAATAAAAAATGGAAAGA+AGG - Chr1:12159638-12159657 MsG0180000856.01.T01:CDS 15.0%
!!! AAGATTTTATTTTTTTATCG+AGG - Chr1:12157190-12157209 MsG0180000856.01.T01:CDS 15.0%
!!! AGATTTTATTTTTTTATCGA+GGG - Chr1:12157191-12157210 MsG0180000856.01.T01:CDS 15.0%
!!! ATAACTACTTTTGTTTTTAT+AGG - Chr1:12159311-12159330 MsG0180000856.01.T01:intron 15.0%
!!! TAACTATATTTTCTATTTTG+TGG - Chr1:12157404-12157423 MsG0180000856.01.T01:intron 15.0%
!!! TTCAATTTTATTTTTTAACC+TGG - Chr1:12157231-12157250 MsG0180000856.01.T01:CDS 15.0%
!! AATAAAAACATCAATCAATG+TGG + Chr1:12156566-12156585 None:intergenic 20.0%
!! ATCGAAAAGTGATATATATT+TGG + Chr1:12158609-12158628 None:intergenic 20.0%
!! GATATATATTTGGCATAATT+TGG + Chr1:12158599-12158618 None:intergenic 20.0%
!! TATTAAAAACAAATATGACC+TGG + Chr1:12158387-12158406 None:intergenic 20.0%
!! TTGTTTGCATTTCTAATTTA+CGG - Chr1:12158169-12158188 MsG0180000856.01.T01:intron 20.0%
!!! AAATATATATCACTTTTCGA+TGG - Chr1:12158608-12158627 MsG0180000856.01.T01:intron 20.0%
!!! AAATTTACTTTTTCAGGAAT+AGG + Chr1:12155942-12155961 None:intergenic 20.0%
!!! AAGTGATTTGCATTTTTTTT+CGG + Chr1:12157801-12157820 None:intergenic 20.0%
!!! AGCTAACAATTTTATTAGAA+CGG + Chr1:12158443-12158462 None:intergenic 20.0%
!!! ATCAATTTTTTTTATCTGCA+TGG - Chr1:12155986-12156005 MsG0180000856.01.T01:intron 20.0%
!!! TACTTTTGTTTTTATAGGAA+TGG - Chr1:12159316-12159335 MsG0180000856.01.T01:intron 20.0%
!!! TATATTGCATCTATTTGTTA+CGG - Chr1:12160120-12160139 MsG0180000856.01.T01:five_prime_UTR 20.0%
!!! TCAAGTGGATTAATAAAAAA+TGG - Chr1:12159630-12159649 MsG0180000856.01.T01:CDS 20.0%
!!! TTAGGATATTTTGCATATTT+TGG - Chr1:12159490-12159509 MsG0180000856.01.T01:intron 20.0%
!!! TTTTAAAATTTTTGTGCAAC+AGG - Chr1:12156052-12156071 MsG0180000856.01.T01:intron 20.0%
!!! TTTTTATTAATCCACTTGAA+TGG + Chr1:12159629-12159648 None:intergenic 20.0%
!!! TTTTTTTATTCTTTTTGTCC+AGG - Chr1:12158976-12158995 MsG0180000856.01.T01:intron 20.0%
! AAAAAATAACAACCTTGTGA+AGG + Chr1:12159166-12159185 None:intergenic 25.0%
! AAAAATCAGCCATATAAGTA+CGG - Chr1:12156367-12156386 MsG0180000856.01.T01:intron 25.0%
! AACAAATAGATGCAATATAG+AGG + Chr1:12160119-12160138 None:intergenic 25.0%
! AACTCAACTTAAATTAGTTG+GGG - Chr1:12157742-12157761 MsG0180000856.01.T01:intron 25.0%
! AATAAATCAAAAACAGGATC+AGG + Chr1:12157522-12157541 None:intergenic 25.0%
! ATGATAAAGTAATGTCTATG+TGG - Chr1:12156244-12156263 MsG0180000856.01.T01:intron 25.0%
! ATTGTAATAAATGAGCTGAA+AGG + Chr1:12157048-12157067 None:intergenic 25.0%
! ATTTAGAGATTACTGTTTAC+AGG - Chr1:12158703-12158722 MsG0180000856.01.T01:intron 25.0%
! CAACTCAACTTAAATTAGTT+GGG - Chr1:12157741-12157760 MsG0180000856.01.T01:intron 25.0%
! TAATAAAATTGTTAGCTGCA+GGG - Chr1:12158446-12158465 MsG0180000856.01.T01:CDS 25.0%
! TAATGTATTCTTCACAGTAT+TGG - Chr1:12159262-12159281 MsG0180000856.01.T01:intron 25.0%
! TCAACTCAACTTAAATTAGT+TGG - Chr1:12157740-12157759 MsG0180000856.01.T01:intron 25.0%
! TCCACAAATAAATCAAAAAC+AGG + Chr1:12157528-12157547 None:intergenic 25.0%
! TGAAGTTAAATGAGTCTTTA+TGG - Chr1:12158926-12158945 MsG0180000856.01.T01:intron 25.0%
! TGATAAAGTAATGTCTATGT+GGG - Chr1:12156245-12156264 MsG0180000856.01.T01:intron 25.0%
! TTCATGATTAAAGAAGACTA+TGG + Chr1:12160052-12160071 None:intergenic 25.0%
! TTGTTTGTATGTAGTGTATT+AGG - Chr1:12157092-12157111 MsG0180000856.01.T01:intron 25.0%
! TTTCATTCATAATCAAAGTC+TGG - Chr1:12156611-12156630 MsG0180000856.01.T01:intron 25.0%
!! ATTTTCTATTTTGTGGCTTT+AGG - Chr1:12157411-12157430 MsG0180000856.01.T01:intron 25.0%
!!! ATGTTTGATGTTATTTTTGC+AGG - Chr1:12160077-12160096 MsG0180000856.01.T01:five_prime_UTR 25.0%
!!! CTTTCTTGCATTTTTTTTTG+GGG - Chr1:12157642-12157661 MsG0180000856.01.T01:CDS 25.0%
!!! GCTTTCTTGCATTTTTTTTT+GGG - Chr1:12157641-12157660 MsG0180000856.01.T01:CDS 25.0%
!!! GTTATTTTTGCAGGAAAAAT+GGG - Chr1:12160086-12160105 MsG0180000856.01.T01:five_prime_UTR 25.0%
!!! GTTTTTATAGGAATGGATTA+TGG - Chr1:12159323-12159342 MsG0180000856.01.T01:intron 25.0%
!!! TCCTGTTTTTGATTTATTTG+TGG - Chr1:12157524-12157543 MsG0180000856.01.T01:intron 25.0%
!!! TCTCTTCTAAAATTAATTCC+AGG - Chr1:12159810-12159829 MsG0180000856.01.T01:CDS 25.0%
!!! TGTTATTTTTGCAGGAAAAA+TGG - Chr1:12160085-12160104 MsG0180000856.01.T01:five_prime_UTR 25.0%
!!! TTTCTTGCATTTTTTTTTGG+GGG - Chr1:12157643-12157662 MsG0180000856.01.T01:CDS 25.0%
AAATGATTCACTGACCTTAT+AGG + Chr1:12159606-12159625 None:intergenic 30.0%
ACAACATCATACTTATATGG+CGG + Chr1:12156520-12156539 None:intergenic 30.0%
ACAAGTTACCTAAATACATC+TGG + Chr1:12158153-12158172 None:intergenic 30.0%
ACCACAACATCATACTTATA+TGG + Chr1:12156523-12156542 None:intergenic 30.0%
AGAAGAGAAAACATCACATA+TGG + Chr1:12159798-12159817 None:intergenic 30.0%
AGAATGCATCTTCTCTAATA+TGG + Chr1:12157480-12157499 None:intergenic 30.0%
ATTACAATGTTGCTGATATG+CGG - Chr1:12159003-12159022 MsG0180000856.01.T01:intron 30.0%
CTAAAATTAATTCCAGGTTG+TGG - Chr1:12159816-12159835 MsG0180000856.01.T01:CDS 30.0%
CTAATAAAATTGTTAGCTGC+AGG - Chr1:12158445-12158464 MsG0180000856.01.T01:CDS 30.0%
GGTAGGAATATCATAAAAAC+TGG - Chr1:12156639-12156658 MsG0180000856.01.T01:intron 30.0%
GTAATTGACTGGATTGTATT+AGG - Chr1:12159472-12159491 MsG0180000856.01.T01:CDS 30.0%
GTTAAGCTTATTTATCAGGT+TGG - Chr1:12158768-12158787 MsG0180000856.01.T01:intron 30.0%
TACAGATTGAACCTAATATC+CGG - Chr1:12156414-12156433 MsG0180000856.01.T01:CDS 30.0%
TGCTGTTAAGCTTATTTATC+AGG - Chr1:12158764-12158783 MsG0180000856.01.T01:intron 30.0%
TTAACCTGGAATTATATTGC+AGG - Chr1:12157245-12157264 MsG0180000856.01.T01:CDS 30.0%
TTCTGATAAGCAAGAGATTA+TGG - Chr1:12155839-12155858 MsG0180000856.01.T01:CDS 30.0%
TTGAGCATAAAACCAGTAAA+GGG - Chr1:12156964-12156983 MsG0180000856.01.T01:CDS 30.0%
TTTGAGCATAAAACCAGTAA+AGG - Chr1:12156963-12156982 MsG0180000856.01.T01:CDS 30.0%
TTTGTATGTAGTGTATTAGG+AGG - Chr1:12157095-12157114 MsG0180000856.01.T01:intron 30.0%
! AAGCTTTTTGTGTCCTTATT+AGG - Chr1:12157717-12157736 MsG0180000856.01.T01:intron 30.0%
! GAATTTTCTGATCAAAATCC+AGG - Chr1:12158193-12158212 MsG0180000856.01.T01:intron 30.0%
! TCAGTGTTATTGATTGGATT+TGG - Chr1:12156333-12156352 MsG0180000856.01.T01:intron 30.0%
! TCTTGTTGCTAATATTTTCC+TGG - Chr1:12158737-12158756 MsG0180000856.01.T01:intron 30.0%
! TCTTGTTTGCAAGAAGAAAA+TGG - Chr1:12158484-12158503 MsG0180000856.01.T01:intron 30.0%
! TGTGTCGTGATTTTTATTGT+TGG - Chr1:12157363-12157382 MsG0180000856.01.T01:intron 30.0%
! TTGATGTCAGTGTTATTGAT+TGG - Chr1:12156327-12156346 MsG0180000856.01.T01:intron 30.0%
! TTGTGCAATGAATAATTTGC+AGG - Chr1:12156929-12156948 MsG0180000856.01.T01:CDS 30.0%
!! TAAGTTGAGTTGACCTAATA+AGG + Chr1:12157733-12157752 None:intergenic 30.0%
!! TCATTTTTATGCCGGATATT+AGG + Chr1:12156428-12156447 None:intergenic 30.0%
!! TCGATCATTCATTTTTATGC+CGG + Chr1:12156436-12156455 None:intergenic 30.0%
!! TGAAGAGAAAAAGCTTTTTC+TGG - Chr1:12157949-12157968 MsG0180000856.01.T01:intron 30.0%
!!! ACCAGTGCATTCTTTTTTAA+TGG - Chr1:12156854-12156873 MsG0180000856.01.T01:intron 30.0%
!!! CCAGTGCATTCTTTTTTAAT+GGG - Chr1:12156855-12156874 MsG0180000856.01.T01:intron 30.0%
!!! CGGGTTATTTTTAGTTTTTC+TGG + Chr1:12155631-12155650 None:intergenic 30.0%
!!! GGCTTTCTTGCATTTTTTTT+TGG - Chr1:12157640-12157659 MsG0180000856.01.T01:CDS 30.0%
!!! TATTTTTTTATCGAGGGCTA+GGG - Chr1:12157197-12157216 MsG0180000856.01.T01:CDS 30.0%
!!! TTATTTTTTTATCGAGGGCT+AGG - Chr1:12157196-12157215 MsG0180000856.01.T01:CDS 30.0%
!!! TTTACTTTTTCAGGAATAGG+CGG + Chr1:12155939-12155958 None:intergenic 30.0%
AAAACCTTTGCTTCATAGGT+CGG + Chr1:12158902-12158921 None:intergenic 35.0%
AAATTAGTTGGGGTCTAATG+TGG - Chr1:12157752-12157771 MsG0180000856.01.T01:intron 35.0%
AACTCAATAAACTGCCGAAA+AGG + Chr1:12158548-12158567 None:intergenic 35.0%
AATCTAGGTACACACACTAT+GGG + Chr1:12157697-12157716 None:intergenic 35.0%
ACTAAAATTGCCAAAGATGC+CGG + Chr1:12157580-12157599 None:intergenic 35.0%
ACTGCAAATTACACACACTA+AGG + Chr1:12156897-12156916 None:intergenic 35.0%
AGATTACTGTTTACAGGTGA+GGG - Chr1:12158709-12158728 MsG0180000856.01.T01:intron 35.0%
ATACTTGCAGCAATCCTATA+AGG - Chr1:12159589-12159608 MsG0180000856.01.T01:intron 35.0%
ATAGGATTGCTGCAAGTATT+GGG + Chr1:12159588-12159607 None:intergenic 35.0%
ATATTCTTGGCCCTAGTTTA+TGG - Chr1:12157274-12157293 MsG0180000856.01.T01:CDS 35.0%
ATCAACGTCCAGATGTATTT+AGG - Chr1:12158142-12158161 MsG0180000856.01.T01:intron 35.0%
ATCGAAAAGGGATATGAAGA+TGG - Chr1:12159038-12159057 MsG0180000856.01.T01:intron 35.0%
ATCTGTATCACATTCACCAT+AGG + Chr1:12156401-12156420 None:intergenic 35.0%
ATGACCTGCAATATAATTCC+AGG + Chr1:12157252-12157271 None:intergenic 35.0%
ATTGCCATATTCTTGCAACA+GGG - Chr1:12158237-12158256 MsG0180000856.01.T01:intron 35.0%
ATTTGTTTCAGATACGTGCA+TGG - Chr1:12157881-12157900 MsG0180000856.01.T01:intron 35.0%
CATAATCAAAGTCTGGATAC+AGG - Chr1:12156618-12156637 MsG0180000856.01.T01:intron 35.0%
CCAAAGAAGAAAGTCAGAAT+GGG - Chr1:12158837-12158856 MsG0180000856.01.T01:intron 35.0%
CCCATTAAAAAAGAATGCAC+TGG + Chr1:12156858-12156877 None:intergenic 35.0%
GAAGAAAACCTTTGCTTCAT+AGG + Chr1:12158906-12158925 None:intergenic 35.0%
GCATATCAGCAACATTGTAA+TGG + Chr1:12159004-12159023 None:intergenic 35.0%
GCCATATAAGTATGATGTTG+TGG - Chr1:12156519-12156538 MsG0180000856.01.T01:CDS 35.0%
GGACACAAAAAGCTTAATCT+AGG + Chr1:12157712-12157731 None:intergenic 35.0%
GGGTTATTTATCAGTAGTGT+AGG - Chr1:12159059-12159078 MsG0180000856.01.T01:intron 35.0%
GTGAATCATTTCCATTCAAG+TGG - Chr1:12159615-12159634 MsG0180000856.01.T01:intron 35.0%
GTTTCTTGAGTTTCATCAGT+CGG + Chr1:12159964-12159983 None:intergenic 35.0%
TAATCTAGGTACACACACTA+TGG + Chr1:12157698-12157717 None:intergenic 35.0%
TAGAGAAGATGCATTCTAGA+GGG - Chr1:12157483-12157502 MsG0180000856.01.T01:intron 35.0%
TATAGGATTGCTGCAAGTAT+TGG + Chr1:12159589-12159608 None:intergenic 35.0%
TATTACATTAGTGCCATAGC+AGG - Chr1:12159363-12159382 MsG0180000856.01.T01:intron 35.0%
TATTCTTGGCCCTAGTTTAT+GGG - Chr1:12157275-12157294 MsG0180000856.01.T01:CDS 35.0%
TCCAAACATCCCATAAACTA+GGG + Chr1:12157287-12157306 None:intergenic 35.0%
TCCATAATTACACCCTTTAC+TGG + Chr1:12156979-12156998 None:intergenic 35.0%
TCGAAAAGGGATATGAAGAT+GGG - Chr1:12159039-12159058 MsG0180000856.01.T01:intron 35.0%
TCGTTAAAGCTCTATTCTTC+AGG - Chr1:12159429-12159448 MsG0180000856.01.T01:CDS 35.0%
TGCAAGGAGACAAACTAATA+CGG + Chr1:12156710-12156729 None:intergenic 35.0%
TGGAATTATATTGCAGGTCA+TGG - Chr1:12157251-12157270 MsG0180000856.01.T01:CDS 35.0%
TGGAGAACTAGCATTATATG+TGG - Chr1:12156659-12156678 MsG0180000856.01.T01:intron 35.0%
TGTTATTACCAACTCTCATG+TGG + Chr1:12156737-12156756 None:intergenic 35.0%
TTAGAGAAGATGCATTCTAG+AGG - Chr1:12157482-12157501 MsG0180000856.01.T01:intron 35.0%
TTCCAAACATCCCATAAACT+AGG + Chr1:12157288-12157307 None:intergenic 35.0%
TTCCTATCTACTCTGTACAT+CGG + Chr1:12156095-12156114 None:intergenic 35.0%
TTTACCTTGACATGAGTACT+AGG + Chr1:12160006-12160025 None:intergenic 35.0%
! AAACCTGAGAACTTTTTGCT+TGG - Chr1:12157911-12157930 MsG0180000856.01.T01:intron 35.0%
! AATTTTTGTGCAACAGGTTC+AGG - Chr1:12156058-12156077 MsG0180000856.01.T01:intron 35.0%
! ACACTAATTTTCCTTCTTCG+CGG - Chr1:12158340-12158359 MsG0180000856.01.T01:intron 35.0%
! ACCAGTAAAGGGTGTAATTA+TGG - Chr1:12156975-12156994 MsG0180000856.01.T01:CDS 35.0%
! AGGAGGCATGTTAATCTTTA+AGG + Chr1:12155598-12155617 None:intergenic 35.0%
! AGGTTGTTGTTCTAACCTTT+GGG - Chr1:12159079-12159098 MsG0180000856.01.T01:intron 35.0%
! ATATCCCTTTTCGATGTGTT+GGG + Chr1:12159033-12159052 None:intergenic 35.0%
! CAGAGGATACACATATTTTC+TGG + Chr1:12158518-12158537 None:intergenic 35.0%
! GATTTTCTGTATCCTAGTGA+AGG - Chr1:12159844-12159863 MsG0180000856.01.T01:CDS 35.0%
! GTGGATTTTTCATTACTGTG+CGG - Chr1:12157543-12157562 MsG0180000856.01.T01:intron 35.0%
! GTGTAAGTACCAACTTTTCT+TGG + Chr1:12158007-12158026 None:intergenic 35.0%
! GTGTTATTGATTGGATTTGG+CGG - Chr1:12156336-12156355 MsG0180000856.01.T01:intron 35.0%
! TAGGTTGTTGTTCTAACCTT+TGG - Chr1:12159078-12159097 MsG0180000856.01.T01:intron 35.0%
! TCTTCAGGCATTTGGTATTT+TGG - Chr1:12159444-12159463 MsG0180000856.01.T01:CDS 35.0%
! TGCAATGAATAATTTGCAGG+TGG - Chr1:12156932-12156951 MsG0180000856.01.T01:CDS 35.0%
! TGTTATTGATTGGATTTGGC+GGG - Chr1:12156337-12156356 MsG0180000856.01.T01:intron 35.0%
! TTCTTCACAGTATTGGAACT+TGG - Chr1:12159269-12159288 MsG0180000856.01.T01:intron 35.0%
! TTTTTCATTACTGTGCGGAT+TGG - Chr1:12157548-12157567 MsG0180000856.01.T01:intron 35.0%
! TTTTTCTCTTCATGAGTTCC+CGG + Chr1:12157941-12157960 None:intergenic 35.0%
!! GTCTCTGATCATTTTAACAC+TGG + Chr1:12158952-12158971 None:intergenic 35.0%
!! TCACTTTTCGATGGAATTGT+TGG - Chr1:12158617-12158636 MsG0180000856.01.T01:intron 35.0%
!! TCAGAAACCCTAATTTGTTC+CGG + Chr1:12155825-12155844 None:intergenic 35.0%
!! TTTCTGGTTGATCTTGGTTT+AGG - Chr1:12157965-12157984 MsG0180000856.01.T01:intron 35.0%
!!! AAGCTTTTTCTGGTTGATCT+TGG - Chr1:12157959-12157978 MsG0180000856.01.T01:intron 35.0%
!!! ATTTTTTTATCGAGGGCTAG+GGG - Chr1:12157198-12157217 MsG0180000856.01.T01:CDS 35.0%
!!! CAATCAATGCTTGCTTTTTG+AGG + Chr1:12156779-12156798 None:intergenic 35.0%
!!! GGTTTTGGACAAGTTTATGT+TGG - Chr1:12156128-12156147 MsG0180000856.01.T01:intron 35.0%
!!! GTTTCATGGAGTTTTGTTTC+TGG + Chr1:12155559-12155578 None:intergenic 35.0%
!!! TTGCATTTTTTTTTGGGGGT+GGG - Chr1:12157647-12157666 MsG0180000856.01.T01:CDS 35.0%
!!! TTTTTTCGGTTTTAGACCCA+CGG + Chr1:12157787-12157806 None:intergenic 35.0%
AACAACCTTGTGAAGGAAGA+AGG + Chr1:12159159-12159178 None:intergenic 40.0%
AATAAACTGCCGAAAAGGTG+CGG + Chr1:12158543-12158562 None:intergenic 40.0%
ACACTAATCCATTGTGTTGC+TGG + Chr1:12158867-12158886 None:intergenic 40.0%
ACAGAGTAGATAGGAAGCTA+GGG - Chr1:12156099-12156118 MsG0180000856.01.T01:intron 40.0%
ACTATGTCTCTCACTTCTAC+TGG - Chr1:12159542-12159561 MsG0180000856.01.T01:intron 40.0%
ACTCCATGAAACACTCTTCA+TGG - Chr1:12155567-12155586 MsG0180000856.01.T01:CDS 40.0%
AGCAACATTGTAATGGTACC+TGG + Chr1:12158997-12159016 None:intergenic 40.0%
AGCTCTATTCTTCAGGCATT+TGG - Chr1:12159436-12159455 MsG0180000856.01.T01:CDS 40.0%
AGGTAGCAGAAGAGATGATT+TGG - Chr1:12158303-12158322 MsG0180000856.01.T01:intron 40.0%
ATCAAAGTCTGGATACAGGT+AGG - Chr1:12156622-12156641 MsG0180000856.01.T01:intron 40.0%
ATGGATGATGACTGTGATAG+CGG - Chr1:12155858-12155877 MsG0180000856.01.T01:CDS 40.0%
ATGGGTCTAATGTCTGGATT+TGG + Chr1:12158644-12158663 None:intergenic 40.0%
ATTAGACCCATAAACACCGA+CGG - Chr1:12158653-12158672 MsG0180000856.01.T01:intron 40.0%
ATTATGGACCTCCTTATGAG+TGG - Chr1:12156991-12157010 MsG0180000856.01.T01:CDS 40.0%
ATTGATGTCAATGCCAACGA+TGG - Chr1:12156471-12156490 MsG0180000856.01.T01:CDS 40.0%
CCATAGCAGGATCTAATAGT+GGG - Chr1:12159376-12159395 MsG0180000856.01.T01:intron 40.0%
CCCATTCTGACTTTCTTCTT+TGG + Chr1:12158840-12158859 None:intergenic 40.0%
CTTCGATGAATACCTTCACT+AGG + Chr1:12159859-12159878 None:intergenic 40.0%
CTTTCCTAGTACTCATGTCA+AGG - Chr1:12159999-12160018 MsG0180000856.01.T01:five_prime_UTR 40.0%
GAGATTACTGTTTACAGGTG+AGG - Chr1:12158708-12158727 MsG0180000856.01.T01:intron 40.0%
GATTGCCATATTCTTGCAAC+AGG - Chr1:12158236-12158255 MsG0180000856.01.T01:intron 40.0%
GCCAAAGAAGAAAGTCAGAA+TGG - Chr1:12158836-12158855 MsG0180000856.01.T01:intron 40.0%
GTCACAACACCGTACTTATA+TGG + Chr1:12156379-12156398 None:intergenic 40.0%
GTGTTTATGGGTCTAATGTC+TGG + Chr1:12158650-12158669 None:intergenic 40.0%
GTTAAACTGTGAAAGCCACA+AGG + Chr1:12157619-12157638 None:intergenic 40.0%
GTTTATGTTGGTCGTCGTAT+TGG - Chr1:12156140-12156159 MsG0180000856.01.T01:intron 40.0%
TAAGCTTAACAGCACAAACC+AGG + Chr1:12158758-12158777 None:intergenic 40.0%
TACAGAGTAGATAGGAAGCT+AGG - Chr1:12156098-12156117 MsG0180000856.01.T01:intron 40.0%
TAGCAGCAGTTGAAGTAATG+CGG + Chr1:12159897-12159916 None:intergenic 40.0%
TAGCTGCAGGGTGAAAATAA+AGG - Chr1:12158458-12158477 MsG0180000856.01.T01:intron 40.0%
TCTACCTTGCCAAGAAAAGT+TGG - Chr1:12157995-12158014 MsG0180000856.01.T01:intron 40.0%
TCTGATCAAAATCCAGGCTT+TGG - Chr1:12158199-12158218 MsG0180000856.01.T01:intron 40.0%
TGTGGCTTTCACAGTTTAAC+AGG - Chr1:12157619-12157638 MsG0180000856.01.T01:CDS 40.0%
TTGCAGGTCATGGATATTCT+TGG - Chr1:12157261-12157280 MsG0180000856.01.T01:CDS 40.0%
TTGCCATATTCTTGCAACAG+GGG - Chr1:12158238-12158257 MsG0180000856.01.T01:intron 40.0%
TTGTAAACCTGCCACTCATA+AGG + Chr1:12157005-12157024 None:intergenic 40.0%
TTGTCCCAACACATCGAAAA+GGG - Chr1:12159026-12159045 MsG0180000856.01.T01:intron 40.0%
! AGGATTTTTCGTCACTGCTA+TGG - Chr1:12159658-12159677 MsG0180000856.01.T01:CDS 40.0%
! AGTACCAACTTTTCTTGGCA+AGG + Chr1:12158002-12158021 None:intergenic 40.0%
! CACTTCTACTGGTGATTTGT+TGG - Chr1:12159553-12159572 MsG0180000856.01.T01:intron 40.0%
! CATATCCCTTTTCGATGTGT+TGG + Chr1:12159034-12159053 None:intergenic 40.0%
! TAATTTTCCTTCTTCGCGGA+CGG - Chr1:12158344-12158363 MsG0180000856.01.T01:intron 40.0%
! TTTTGGCGACAGTAATTGAC+TGG - Chr1:12159461-12159480 MsG0180000856.01.T01:CDS 40.0%
!! ACTGGTGATTTGTTGGTTTC+AGG - Chr1:12159560-12159579 MsG0180000856.01.T01:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG - Chr1:12159331-12159350 MsG0180000856.01.T01:intron 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG - Chr1:12159857-12159876 MsG0180000856.01.T01:CDS 40.0%
!! CTGGTGATTTGTTGGTTTCA+GGG - Chr1:12159561-12159580 MsG0180000856.01.T01:intron 40.0%
!! CTTTAGGATGTCTGCTGAAA+TGG - Chr1:12157427-12157446 MsG0180000856.01.T01:CDS 40.0%
!! GATACACATATTTTCTGGCG+AGG + Chr1:12158513-12158532 None:intergenic 40.0%
!! GCTCAAGCTTTAAGCAAAAG+CGG + Chr1:12156685-12156704 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG - Chr1:12159332-12159351 MsG0180000856.01.T01:intron 40.0%
!! TAACCTTTGGGCACTGATTA+TGG - Chr1:12159091-12159110 MsG0180000856.01.T01:intron 40.0%
!! TCATCAGTCGGTTTTCTTCT+TGG + Chr1:12159952-12159971 None:intergenic 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG - Chr1:12159861-12159880 MsG0180000856.01.T01:CDS 40.0%
!!! CTTGCATTTTTTTTTGGGGG+TGG - Chr1:12157646-12157665 MsG0180000856.01.T01:CDS 40.0%
!!! GTGTTGTTACGGTTTTTAGC+AGG + Chr1:12155720-12155739 None:intergenic 40.0%
!!! GTTTTTCTGGTTCGAAGTTG+AGG + Chr1:12155618-12155637 None:intergenic 40.0%
!!! TGCATTTTTTTTTGGGGGTG+GGG - Chr1:12157648-12157667 MsG0180000856.01.T01:CDS 40.0%
!!! TTCGGGTTTTGATTCGGATT+CGG + Chr1:12155651-12155670 None:intergenic 40.0%
AACTGCTGCTACATATGACC+AGG - Chr1:12159906-12159925 MsG0180000856.01.T01:CDS 45.0%
ACTCTCATGTGGAGTTTGCA+AGG + Chr1:12156726-12156745 None:intergenic 45.0%
AGTGAGAGACATAGTCACAC+AGG + Chr1:12159537-12159556 None:intergenic 45.0%
AGTGTATTAGGAGGTAGCCA+TGG - Chr1:12157104-12157123 MsG0180000856.01.T01:intron 45.0%
ATCTGAAAATCCAGCACCAC+GGG + Chr1:12159717-12159736 None:intergenic 45.0%
ATTCATCGAAGGTGGGACAA+TGG - Chr1:12159868-12159887 MsG0180000856.01.T01:CDS 45.0%
CACCGATGTACAGAGTAGAT+AGG - Chr1:12156090-12156109 MsG0180000856.01.T01:intron 45.0%
CACGAGTTCATTACAAGGGA+CGG - Chr1:12157132-12157151 MsG0180000856.01.T01:intron 45.0%
CATCCATAATCAGTGCCCAA+AGG + Chr1:12159097-12159116 None:intergenic 45.0%
CCCACTATTAGATCCTGCTA+TGG + Chr1:12159379-12159398 None:intergenic 45.0%
CGTCAAAATCAACCAAAGCC+TGG + Chr1:12158214-12158233 None:intergenic 45.0%
CTATCATACCTCAACAGCAC+CGG + Chr1:12156174-12156193 None:intergenic 45.0%
CTCATCATCATCTCCTTCCA+TGG + Chr1:12158814-12158833 None:intergenic 45.0%
CTCATCCTTCTTCCTTCACA+AGG - Chr1:12159151-12159170 MsG0180000856.01.T01:intron 45.0%
GAAAATCAAGCTCCACAACC+TGG + Chr1:12159831-12159850 None:intergenic 45.0%
GATCTGAAAATCCAGCACCA+CGG + Chr1:12159718-12159737 None:intergenic 45.0%
GCAAGGTGATTGGTATGTCA+TGG - Chr1:12157154-12157173 MsG0180000856.01.T01:intron 45.0%
GCCATAGCAGGATCTAATAG+TGG - Chr1:12159375-12159394 MsG0180000856.01.T01:intron 45.0%
GCCCTAGTTTATGGGATGTT+TGG - Chr1:12157283-12157302 MsG0180000856.01.T01:CDS 45.0%
GCTAGTGTACATGCTCATCT+TGG - Chr1:12158274-12158293 MsG0180000856.01.T01:CDS 45.0%
GTAGATAGGAAGCTAGGGAA+AGG - Chr1:12156104-12156123 MsG0180000856.01.T01:intron 45.0%
GTCCCACGAGTTCATTACAA+GGG - Chr1:12157128-12157147 MsG0180000856.01.T01:intron 45.0%
GTCCCTTGTAATGAACTCGT+GGG + Chr1:12157133-12157152 None:intergenic 45.0%
GTGTACATGCTCATCTTGGT+AGG - Chr1:12158278-12158297 MsG0180000856.01.T01:CDS 45.0%
GTTCCCCTGTTGCAAGAATA+TGG + Chr1:12158244-12158263 None:intergenic 45.0%
GTTGTCCCAACACATCGAAA+AGG - Chr1:12159025-12159044 MsG0180000856.01.T01:intron 45.0%
TAAACCTGCCACTCATAAGG+AGG + Chr1:12157002-12157021 None:intergenic 45.0%
TACTAAGTACAAGAGCAGCC+TGG + Chr1:12159927-12159946 None:intergenic 45.0%
TCAATGCCAACGATGGTAGA+TGG - Chr1:12156478-12156497 MsG0180000856.01.T01:CDS 45.0%
TCACGTGCCGGAACAAATTA+GGG - Chr1:12155815-12155834 MsG0180000856.01.T01:intron 45.0%
TCGGCAGTTTATTGAGTTCG+TGG - Chr1:12158550-12158569 MsG0180000856.01.T01:intron 45.0%
TGCAAACTCCACATGAGAGT+TGG - Chr1:12156726-12156745 MsG0180000856.01.T01:CDS 45.0%
TGTCCCACGAGTTCATTACA+AGG - Chr1:12157127-12157146 MsG0180000856.01.T01:intron 45.0%
TTGGATATAGCCGGCATCTT+TGG - Chr1:12157567-12157586 MsG0180000856.01.T01:intron 45.0%
TTGGGGTCTAATGTGGCTTT+AGG - Chr1:12157759-12157778 MsG0180000856.01.T01:intron 45.0%
TTGTACTTGATCACGTGCAG+CGG + Chr1:12155754-12155773 None:intergenic 45.0%
TTTGTGCAACAGGTTCAGGT+GGG - Chr1:12156062-12156081 MsG0180000856.01.T01:intron 45.0%
! AAGCTAGGGAAAGGAGGTTT+TGG - Chr1:12156113-12156132 MsG0180000856.01.T01:intron 45.0%
! ATAAACTGCCGAAAAGGTGC+GGG + Chr1:12158542-12158561 None:intergenic 45.0%
! ATCTAATAGTGGGAGCTCGT+TGG - Chr1:12159386-12159405 MsG0180000856.01.T01:intron 45.0%
! TTTTGTGCAACAGGTTCAGG+TGG - Chr1:12156061-12156080 MsG0180000856.01.T01:intron 45.0%
!! AAGTACGGTGTTGTGACCTA+TGG - Chr1:12156382-12156401 MsG0180000856.01.T01:intron 45.0%
!! AATGTGGCTTTAGGATCCGT+GGG - Chr1:12157768-12157787 MsG0180000856.01.T01:intron 45.0%
!! ACACATATTTTCTGGCGAGG+TGG + Chr1:12158510-12158529 None:intergenic 45.0%
!! GCTCCATGAAGAGTGTTTCA+TGG + Chr1:12155573-12155592 None:intergenic 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG - Chr1:12159860-12159879 MsG0180000856.01.T01:CDS 45.0%
!! TAATGTGGCTTTAGGATCCG+TGG - Chr1:12157767-12157786 MsG0180000856.01.T01:intron 45.0%
!! TATCAGGTTGGACAGAAGAG+AGG - Chr1:12158780-12158799 MsG0180000856.01.T01:intron 45.0%
!! TGGTGCTGGATTTTCAGATC+AGG - Chr1:12159718-12159737 MsG0180000856.01.T01:CDS 45.0%
!! TTTCTGGTTCGAAGTTGAGG+AGG + Chr1:12155615-12155634 None:intergenic 45.0%
!!! ATCGGGTTCGGGTTTTGATT+CGG + Chr1:12155657-12155676 None:intergenic 45.0%
!!! ATTTTTTTTTGGGGGTGGGG+GGG - Chr1:12157651-12157670 MsG0180000856.01.T01:CDS 45.0%
!!! CATTTTTTTTTGGGGGTGGG+GGG - Chr1:12157650-12157669 MsG0180000856.01.T01:CDS 45.0%
!!! GCATTTTTTTTTGGGGGTGG+GGG - Chr1:12157649-12157668 MsG0180000856.01.T01:CDS 45.0%
!!! GGCAATTTTAGTTGCCAGAC+TGG - Chr1:12157588-12157607 MsG0180000856.01.T01:intron 45.0%
!!! TCGGGTTTTGATTCGGATTC+GGG + Chr1:12155650-12155669 None:intergenic 45.0%
AAACGAACAACCTCACGTGC+CGG - Chr1:12155803-12155822 MsG0180000856.01.T01:intron 50.0%
AACCGCAGCTGATAAAGGTC+CGG - Chr1:12155890-12155909 MsG0180000856.01.T01:CDS 50.0%
AACCGGACCTTTATCAGCTG+CGG + Chr1:12155895-12155914 None:intergenic 50.0%
AATGAACTCGTGGGACACCA+TGG + Chr1:12157124-12157143 None:intergenic 50.0%
ACCTCTTCTACCTCGTGTAG+CGG + Chr1:12155694-12155713 None:intergenic 50.0%
AGGTTGGACAGAAGAGAGGA+CGG - Chr1:12158784-12158803 MsG0180000856.01.T01:intron 50.0%
ATGACCTGGTATCCTTGCCA+GGG + Chr1:12158373-12158392 None:intergenic 50.0%
ATGCCAACGATGGTAGATGG+CGG - Chr1:12156481-12156500 MsG0180000856.01.T01:CDS 50.0%
ATTGTTATGTCCCGTGGTGC+TGG - Chr1:12159704-12159723 MsG0180000856.01.T01:CDS 50.0%
CATGCTCATCTTGGTAGGAC+AGG - Chr1:12158283-12158302 MsG0180000856.01.T01:CDS 50.0%
CGTAAGTTCATCTCTCGTGC+TGG - Chr1:12157322-12157341 MsG0180000856.01.T01:intron 50.0%
CGTCCCTTGTAATGAACTCG+TGG + Chr1:12157134-12157153 None:intergenic 50.0%
CGTTGGCGTGATAATTCGAC+TGG - Chr1:12158102-12158121 MsG0180000856.01.T01:CDS 50.0%
CTCACGTGCCGGAACAAATT+AGG - Chr1:12155814-12155833 MsG0180000856.01.T01:intron 50.0%
CTCCCTTCATCTTCAGCAAC+CGG + Chr1:12155912-12155931 None:intergenic 50.0%
CTGGAAGATTCGAACGACGA+CGG + Chr1:12155540-12155559 None:intergenic 50.0%
GAGAATAGAACCGACGCAGA+TGG + Chr1:12155482-12155501 None:intergenic 50.0%
GATAGGAAGCTAGGGAAAGG+AGG - Chr1:12156107-12156126 MsG0180000856.01.T01:intron 50.0%
GGACACAGCACAATCAACTG+CGG + Chr1:12160031-12160050 None:intergenic 50.0%
GGCAGGTTTACAAGTGAGTG+TGG - Chr1:12157012-12157031 MsG0180000856.01.T01:CDS 50.0%
GGGCCAAGCAAAAAGTTCTC+AGG + Chr1:12157917-12157936 None:intergenic 50.0%
GTCCGGTTGCTGAAGATGAA+GGG - Chr1:12155907-12155926 MsG0180000856.01.T01:CDS 50.0%
GTTCATTACAAGGGACGGCA+AGG - Chr1:12157137-12157156 MsG0180000856.01.T01:intron 50.0%
TATGACCTGGTATCCTTGCC+AGG + Chr1:12158374-12158393 None:intergenic 50.0%
TCTCTTCATGAGTTCCCGGA+GGG + Chr1:12157937-12157956 None:intergenic 50.0%
TGGGAATGCCAGCAACACAA+TGG - Chr1:12158856-12158875 MsG0180000856.01.T01:intron 50.0%
TGGGCAATTGTTATGTCCCG+TGG - Chr1:12159698-12159717 MsG0180000856.01.T01:CDS 50.0%
TTCTCTTCATGAGTTCCCGG+AGG + Chr1:12157938-12157957 None:intergenic 50.0%
TTGTGCAGTGAAACCAGTGC+CGG + Chr1:12159120-12159139 None:intergenic 50.0%
TTTGCCATGCAGCAACTCGT+TGG - Chr1:12158085-12158104 MsG0180000856.01.T01:CDS 50.0%
! AACTTTTTGCTTGGCCCTCC+GGG - Chr1:12157920-12157939 MsG0180000856.01.T01:intron 50.0%
! GAACTTTTTGCTTGGCCCTC+CGG - Chr1:12157919-12157938 MsG0180000856.01.T01:intron 50.0%
! GGTGTCGTGTATAGCAATCG+AGG - Chr1:12157448-12157467 MsG0180000856.01.T01:CDS 50.0%
! TAGTACCTTCTGAGCACCGT+CGG + Chr1:12158672-12158691 None:intergenic 50.0%
! TGAGCACCGTCGGTGTTTAT+GGG + Chr1:12158662-12158681 None:intergenic 50.0%
!! CTAATTTGTTCCGGCACGTG+AGG + Chr1:12155816-12155835 None:intergenic 50.0%
!! CTGTGCGGATTGGATATAGC+CGG - Chr1:12157558-12157577 MsG0180000856.01.T01:intron 50.0%
!! GATGATGACTGTGATAGCGG+CGG - Chr1:12155861-12155880 MsG0180000856.01.T01:CDS 50.0%
!! TGGGCACTGATTATGGATGC+CGG - Chr1:12159098-12159117 MsG0180000856.01.T01:intron 50.0%
AAACACCGACGGTGCTCAGA+AGG - Chr1:12158664-12158683 MsG0180000856.01.T01:intron 55.0%
ACAAGGGACGGCAAGGTGAT+TGG - Chr1:12157144-12157163 MsG0180000856.01.T01:intron 55.0%
AGAACCGACGCAGATGGAGA+GGG + Chr1:12155476-12155495 None:intergenic 55.0%
AGAGGACGGTTGACCATGGA+AGG - Chr1:12158798-12158817 MsG0180000856.01.T01:intron 55.0%
CACGCCGACCTATGAAGCAA+AGG - Chr1:12158895-12158914 MsG0180000856.01.T01:intron 55.0%
CCTCTTCTACCTCGTGTAGC+GGG + Chr1:12155693-12155712 None:intergenic 55.0%
CTGATTATGGATGCCGGCAC+TGG - Chr1:12159104-12159123 MsG0180000856.01.T01:intron 55.0%
GAAGAGAGGACGGTTGACCA+TGG - Chr1:12158794-12158813 MsG0180000856.01.T01:intron 55.0%
GGCCACTGCTGGAAGTAGAT+GGG - Chr1:12159679-12159698 MsG0180000856.01.T01:CDS 55.0%
GGGAGAACCGCAGCTGATAA+AGG - Chr1:12155885-12155904 MsG0180000856.01.T01:CDS 55.0%
GGTCCGGTTGCTGAAGATGA+AGG - Chr1:12155906-12155925 MsG0180000856.01.T01:CDS 55.0%
TACTTGATCACGTGCAGCGG+CGG + Chr1:12155751-12155770 None:intergenic 55.0%
TAGAACCGACGCAGATGGAG+AGG + Chr1:12155477-12155496 None:intergenic 55.0%
TCGGGTTTAGCGATCGGGTT+CGG + Chr1:12155669-12155688 None:intergenic 55.0%
TGCCAACGATGGTAGATGGC+GGG - Chr1:12156482-12156501 MsG0180000856.01.T01:CDS 55.0%
TGCCCATCTACTTCCAGCAG+TGG + Chr1:12159684-12159703 None:intergenic 55.0%
TGGACCTCCTTATGAGTGGC+AGG - Chr1:12156995-12157014 MsG0180000856.01.T01:CDS 55.0%
TGGCCACTGCTGGAAGTAGA+TGG - Chr1:12159678-12159697 MsG0180000856.01.T01:CDS 55.0%
TTCACCCTCTCCATCTGCGT+CGG - Chr1:12155469-12155488 MsG0180000856.01.T01:CDS 55.0%
! CTGAGCACCGTCGGTGTTTA+TGG + Chr1:12158663-12158682 None:intergenic 55.0%
! GTTGGTCGTCGTATTGGTGC+CGG - Chr1:12156146-12156165 MsG0180000856.01.T01:intron 55.0%
! TCCTCTGTCCCGCACCTTTT+CGG - Chr1:12158531-12158550 MsG0180000856.01.T01:intron 55.0%
!! ATGACTGTGATAGCGGCGGT+GGG - Chr1:12155865-12155884 MsG0180000856.01.T01:CDS 55.0%
!! TCTACCTCGTGTAGCGGGTT+CGG + Chr1:12155688-12155707 None:intergenic 55.0%
AAACCCGAACCCGCTACACG+AGG - Chr1:12155681-12155700 MsG0180000856.01.T01:CDS 60.0%
CACCCGCCATCTACCATCGT+TGG + Chr1:12156487-12156506 None:intergenic 60.0%
CACGCCAACGAGTTGCTGCA+TGG + Chr1:12158092-12158111 None:intergenic 60.0%
CCCGCTACACGAGGTAGAAG+AGG - Chr1:12155690-12155709 MsG0180000856.01.T01:CDS 60.0%
CGGGTTTAGCGATCGGGTTC+GGG + Chr1:12155668-12155687 None:intergenic 60.0%
GCCACAAGGTGAGACCAGTC+TGG + Chr1:12157605-12157624 None:intergenic 60.0%
GCTACCCTGGCAAGGATACC+AGG - Chr1:12158366-12158385 MsG0180000856.01.T01:intron 60.0%
GTCACTGCTATGGCCACTGC+TGG - Chr1:12159668-12159687 MsG0180000856.01.T01:CDS 60.0%
GTGCAACAGGTTCAGGTGGG+TGG - Chr1:12156065-12156084 MsG0180000856.01.T01:intron 60.0%
! CGGGTTCGGGTTTAGCGATC+GGG + Chr1:12155674-12155693 None:intergenic 60.0%
! GCGGGTTCGGGTTTAGCGAT+CGG + Chr1:12155675-12155694 None:intergenic 60.0%
!! CGATGGTAGATGGCGGGTGA+TGG - Chr1:12156488-12156507 MsG0180000856.01.T01:CDS 60.0%
!! CGGCGGCGATGGTGTTGTTA+CGG + Chr1:12155731-12155750 None:intergenic 60.0%
!! CTACCTCGTGTAGCGGGTTC+GGG + Chr1:12155687-12155706 None:intergenic 60.0%
!! GATGACTGTGATAGCGGCGG+TGG - Chr1:12155864-12155883 MsG0180000856.01.T01:CDS 60.0%
!! GCCAGACTGGTCTCACCTTG+TGG - Chr1:12157601-12157620 MsG0180000856.01.T01:CDS 60.0%
!! TACCTCAACAGCACCGGCTC+CGG + Chr1:12156168-12156187 None:intergenic 60.0%
!!! TTTTTTGGGGGTGGGGGGGT+GGG - Chr1:12157655-12157674 MsG0180000856.01.T01:CDS 60.0%
!!! TTTTTTTGGGGGTGGGGGGG+TGG - Chr1:12157654-12157673 MsG0180000856.01.T01:CDS 60.0%
AGGGTAGCCGTCCGCGAAGA+AGG + Chr1:12158354-12158373 None:intergenic 65.0%
TTCTTCGCGGACGGCTACCC+TGG - Chr1:12158353-12158372 MsG0180000856.01.T01:intron 65.0%
TTGATCACGTGCAGCGGCGG+CGG + Chr1:12155748-12155767 None:intergenic 65.0%
! GCCGAAAAGGTGCGGGACAG+AGG + Chr1:12158535-12158554 None:intergenic 65.0%
!! CGTCGTATTGGTGCCGGAGC+CGG - Chr1:12156152-12156171 MsG0180000856.01.T01:intron 65.0%
!! TTTTTGGGGGTGGGGGGGTG+GGG - Chr1:12157656-12157675 MsG0180000856.01.T01:CDS 65.0%
!! TGCCGGAGCCGGTGCTGTTG+AGG - Chr1:12156163-12156182 MsG0180000856.01.T01:CDS 70.0%
!! TTTTGGGGGTGGGGGGGTGG+GGG - Chr1:12157657-12157676 MsG0180000856.01.T01:CDS 70.0%
CGCGGACGGCTACCCTGGCA+AGG - Chr1:12158358-12158377 MsG0180000856.01.T01:intron 75.0%
TTTGGGGGTGGGGGGGTGGG+GGG - Chr1:12157658-12157677 MsG0180000856.01.T01:CDS 75.0%
! ACGTGCAGCGGCGGCGGCGA+TGG + Chr1:12155742-12155761 None:intergenic 80.0%
! TTGGGGGTGGGGGGGTGGGG+GGG - Chr1:12157659-12157678 MsG0180000856.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 12155419 12160158 12155419 ID=MsG0180000856.01;Name=MsG0180000856.01
Chr1 mRNA 12155419 12160158 12155419 ID=MsG0180000856.01.T01;Parent=MsG0180000856.01;Name=MsG0180000856.01.T01;_AED=0.33;_eAED=0.35;_QI=190|0.92|0.86|1|1|1|15|0|706
Chr1 exon 12159624 12160158 12159624 ID=MsG0180000856.01.T01:exon:347;Parent=MsG0180000856.01.T01
Chr1 exon 12159393 12159503 12159393 ID=MsG0180000856.01.T01:exon:348;Parent=MsG0180000856.01.T01
Chr1 exon 12158553 12158626 12158553 ID=MsG0180000856.01.T01:exon:349;Parent=MsG0180000856.01.T01
Chr1 exon 12158402 12158471 12158402 ID=MsG0180000856.01.T01:exon:350;Parent=MsG0180000856.01.T01
Chr1 exon 12158255 12158310 12158255 ID=MsG0180000856.01.T01:exon:351;Parent=MsG0180000856.01.T01
Chr1 exon 12158073 12158144 12158073 ID=MsG0180000856.01.T01:exon:352;Parent=MsG0180000856.01.T01
Chr1 exon 12157591 12157685 12157591 ID=MsG0180000856.01.T01:exon:353;Parent=MsG0180000856.01.T01
Chr1 exon 12157414 12157480 12157414 ID=MsG0180000856.01.T01:exon:354;Parent=MsG0180000856.01.T01
Chr1 exon 12157190 12157319 12157190 ID=MsG0180000856.01.T01:exon:355;Parent=MsG0180000856.01.T01
Chr1 exon 12156892 12157110 12156892 ID=MsG0180000856.01.T01:exon:356;Parent=MsG0180000856.01.T01
Chr1 exon 12156661 12156791 12156661 ID=MsG0180000856.01.T01:exon:357;Parent=MsG0180000856.01.T01
Chr1 exon 12156405 12156579 12156405 ID=MsG0180000856.01.T01:exon:358;Parent=MsG0180000856.01.T01
Chr1 exon 12156154 12156244 12156154 ID=MsG0180000856.01.T01:exon:359;Parent=MsG0180000856.01.T01
Chr1 exon 12155838 12155995 12155838 ID=MsG0180000856.01.T01:exon:360;Parent=MsG0180000856.01.T01
Chr1 exon 12155419 12155745 12155419 ID=MsG0180000856.01.T01:exon:361;Parent=MsG0180000856.01.T01
Chr1 five_prime_UTR 12159969 12160158 12159969 ID=MsG0180000856.01.T01:five_prime_utr;Parent=MsG0180000856.01.T01
Chr1 CDS 12159624 12159968 12159624 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12159393 12159503 12159393 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12158553 12158626 12158553 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12158402 12158471 12158402 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12158255 12158310 12158255 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12158073 12158144 12158073 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12157591 12157685 12157591 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12157414 12157480 12157414 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12157190 12157319 12157190 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12156892 12157110 12156892 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12156661 12156791 12156661 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12156405 12156579 12156405 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12156154 12156244 12156154 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12155838 12155995 12155838 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Chr1 CDS 12155419 12155745 12155419 ID=MsG0180000856.01.T01:cds;Parent=MsG0180000856.01.T01
Gene Sequence

>MsG0180000856.01.T01

ATGCCTCCTCAACTTCGAACCAGAAAAACTAAAAATAACCCGAATCCGAATCAAAACCCGAACCCGATCGCTAAACCCGAACCCGCTACACGAGGTAGAAGAGGTAGACCTGCTAAAAACCGTAACAACACCATCGCCGCCGCCGCTGCACGTGATCAAGTACAAGAACAACAACAACAACAACAACAACAACAAAACGAACAACCTCACGTGCCGGAACAAATTAGGGTTTCTGATAAGCAAGAGATTATGGATGATGACTGTGATAGCGGCGGTGGGAGAACCGCAGCTGATAAAGGTCCGGTTGCTGAAGATGAAGGGAGTACACCGCCTATTCCTGAAAAAGTTCAGGTGGGTGGTTCACCGATGTACAGAGTAGATAGGAAGCTAGGGAAAGGAGGTTTTGGACAAGTTTATGTTGGTCGTCGTATTGGTGCCGGAGCCGGTGCTGTTGAGGTGGCTTTGAAATTTGAGCATAAAACCAGTAAAGGGTGTAATTATGGACCTCCTTATGAGTGGCAGGTTTACAATGTATTAGGAGGTAGCCATGGTGTCCCACGAGTTCATTACAAGGGACGGCAAGGTGATTGGTATGTCATGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGTCGTGTATAGCAATCGAGGCTGTTTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGACGTAAAACCTGAGAACTTTTTGCTTGGCCCTCCGGGAACTCATGAAGAGAAAAAGCTTTTTCTGGTTGATCTTGGTTTAGCAACTCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGATTACGATCAACGTCCAGATGTATTTAGGGGAACTGTTCGTTATGCTAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCATACACACTAATTTTCCTTCTTCGCGGACGGCTACCCTGGCAAGGATACCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGCCACCTCGCCAGAAAATATGTGTATCCTCTGTCCCGCACCTTTTCGGCAGTTTATTGAGTTCGTGGTGAATTTGAAGTTCGACGAAGAACCAAATTATGCCAAATATATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAACACCGACGGTGCTCAGAAGGTTGGACAGAAGAGAGGACGGTTGACCATGGAAGGAGATGATGATGAGCAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCACGCCGACCTATGAAGCAAAGGTACCATTACAATGTTGCTGATATGCGGTTGTCCCAACACATCGAAAAGGGATATGAAGATGGGTTATTTATCAGTAGTGTAGGTTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTTCTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATTAGTGCCATAGCAGGATCTAATAGTGGGAGCTCGTTGGTTGTAATGTCAAAAGGGACCCAATACTTGCAGCAATCCTATAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTCGTCACTGCTATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAGCTTGATTTTCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATTACTTCAACTGCTGCTACATATGACCAGGCTGCTCTTGTACTTAGTATTCCAAGAAGAAAACCGACTGATGAAACTCAAGAAACACTTCGCACATCTGACTTTCCTAGTACTCATGTCAAGGTAAATACCGCAGTTGATTGTGCTGTGTCCATAGTCTTCTTTAATCATGAAAGCTTATGTTTGATGTTATTTTTGCAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTACGGAAGAACTGTTTCATGA

Protein sequence

>MsG0180000856.01.T01

MPPQLRTRKTKNNPNPNQNPNPIAKPEPATRGRRGRPAKNRNNTIAAAAARDQVQEQQQQQQQQQNEQPHVPEQIRVSDKQEIMDDDCDSGGGRTAADKGPVAEDEGSTPPIPEKVQVGGSPMYRVDRKLGKGGFGQVYVGRRIGAGAGAVEVALKFEHKTSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDWYVMVMDILGPSLWDVWNNKTHTMSAEMVSCIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEFVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKVGQKRGRLTMEGDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSFFLHKEWIMEQWEKNYYISAIAGSNSGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAALVLSIPRRKPTDETQETLRTSDFPSTHVKVNTAVDCAVSIVFFNHESLCLMLFLQEKWAKNLYIASICYGRTVS*