Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004915.01.T01 | XP_003591585.1 | 97.17 | 530 | 15 | 0 | 1 | 530 | 1 | 530 | 0 | 1066 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004915.01.T01 | O82266 | 58.38 | 531 | 209 | 6 | 1 | 529 | 9 | 529 | 0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004915.01.T01 | G7I2U5 | 97.170 | 530 | 15 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1066 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000882.01 | MsG0180004915.01 | 0.810793 | 9.659702e-51 | 5.878242e-48 |
| MsG0180002023.01 | MsG0180004915.01 | 0.880421 | 5.567135e-70 | 3.134710e-66 |
| MsG0180003073.01 | MsG0180004915.01 | 0.841990 | 3.398350e-58 | 5.080255e-55 |
| MsG0180003097.01 | MsG0180004915.01 | 0.834448 | 2.979663e-56 | 3.537283e-53 |
| MsG0180003113.01 | MsG0180004915.01 | 0.805070 | 1.594031e-49 | 8.354105e-47 |
| MsG0180004130.01 | MsG0180004915.01 | 0.807400 | 5.149114e-50 | 2.865209e-47 |
| MsG0180004915.01 | MsG0180005436.01 | 0.816036 | 6.800838e-52 | 4.766443e-49 |
| MsG0180004915.01 | MsG0180005957.01 | 0.823999 | 1.023249e-53 | 8.950542e-51 |
| MsG0180004915.01 | MsG0180006143.01 | 0.825749 | 3.955572e-54 | 3.637669e-51 |
| MsG0180004915.01 | MsG0280006327.01 | 0.820435 | 6.868295e-53 | 5.434207e-50 |
| MsG0180004915.01 | MsG0280006406.01 | 0.844641 | 6.664556e-59 | 1.082806e-55 |
| MsG0180004915.01 | MsG0280007222.01 | 0.849757 | 2.634790e-60 | 5.046820e-57 |
| MsG0180004915.01 | MsG0280007690.01 | 0.874884 | 4.762717e-68 | 2.180342e-64 |
| MsG0180004915.01 | MsG0280008037.01 | 0.864466 | 1.191634e-64 | 3.745200e-61 |
| MsG0180004915.01 | MsG0280009230.01 | 0.893100 | 8.603854e-75 | 8.086513e-71 |
| MsG0180004915.01 | MsG0280009716.01 | 0.895930 | 6.000138e-76 | 6.349421e-72 |
| MsG0180004915.01 | MsG0380012250.01 | 0.803496 | 3.390804e-49 | 1.706536e-46 |
| MsG0180004915.01 | MsG0380012566.01 | 0.826673 | 2.384328e-54 | 2.251100e-51 |
| MsG0180004915.01 | MsG0380014276.01 | 0.830656 | 2.597349e-55 | 2.754047e-52 |
| MsG0180004915.01 | MsG0380014577.01 | 0.865158 | 7.230875e-65 | 2.329418e-61 |
| MsG0180004915.01 | MsG0380017788.01 | 0.860426 | 2.082716e-63 | 5.691027e-60 |
| MsG0180004915.01 | MsG0480018289.01 | 0.812312 | 4.516967e-51 | 2.862249e-48 |
| MsG0180004915.01 | MsG0480021904.01 | 0.896082 | 5.186893e-76 | 5.524437e-72 |
| MsG0180004915.01 | MsG0480022599.01 | 0.801639 | 8.187774e-49 | 3.930002e-46 |
| MsG0180004915.01 | MsG0480022791.01 | 0.807115 | 5.917297e-50 | 3.268170e-47 |
| MsG0180004915.01 | MsG0480023744.01 | 0.834546 | 2.815681e-56 | 3.352443e-53 |
| MsG0180004915.01 | MsG0580024390.01 | 0.814861 | 1.241634e-51 | 8.426618e-49 |
| MsG0180004915.01 | MsG0580024512.01 | 0.805488 | 1.303294e-49 | 6.903925e-47 |
| MsG0180004915.01 | MsG0580025296.01 | 0.809774 | 1.602298e-50 | 9.492351e-48 |
| MsG0180004915.01 | MsG0580025400.01 | 0.845726 | 3.392023e-59 | 5.706273e-56 |
| MsG0180004915.01 | MsG0580025421.01 | 0.871697 | 5.607232e-67 | 2.283261e-63 |
| MsG0180004915.01 | MsG0580027319.01 | -0.833866 | 4.168629e-56 | 4.863078e-53 |
| MsG0180004915.01 | MsG0580029283.01 | 0.810884 | 9.232920e-51 | 5.632381e-48 |
| MsG0180004915.01 | MsG0580029783.01 | 0.828041 | 1.120679e-54 | 1.101170e-51 |
| MsG0180004915.01 | MsG0680030285.01 | 0.801671 | 8.066907e-49 | 3.875109e-46 |
| MsG0180004915.01 | MsG0680030414.01 | 0.876968 | 9.150217e-69 | 4.523360e-65 |
| MsG0180004915.01 | MsG0680031822.01 | 0.840398 | 8.905483e-58 | 1.267026e-54 |
| MsG0180004915.01 | MsG0680035854.01 | 0.814063 | 1.864739e-51 | 1.238551e-48 |
| MsG0180004915.01 | MsG0780039289.01 | 0.832380 | 9.770118e-56 | 1.090122e-52 |
| MsG0180004915.01 | MsG0780039623.01 | 0.854242 | 1.402356e-61 | 3.112331e-58 |
| MsG0180004915.01 | MsG0780041555.01 | 0.826969 | 2.025807e-54 | 1.929235e-51 |
| MsG0180004915.01 | MsG0880042604.01 | 0.804443 | 2.155129e-49 | 1.111302e-46 |
| MsG0180004915.01 | MsG0880046321.01 | 0.859483 | 4.009953e-63 | 1.060693e-59 |
| MsG0180004915.01 | MsG0880046328.01 | 0.847758 | 9.443116e-60 | 1.695577e-56 |
| MsG0180004915.01 | MsG0880046575.01 | 0.821152 | 4.701083e-53 | 3.794279e-50 |
| MsG0180004915.01 | MsG0880046647.01 | 0.806624 | 7.515129e-50 | 4.098189e-47 |
| MsG0180004915.01 | MsG0880047038.01 | 0.813898 | 2.026784e-51 | 1.340215e-48 |
| MsG0180004915.01 | MsG0880047428.01 | 0.809979 | 1.447898e-50 | 8.623611e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004915.01.T01 | MTR_1g089260 | 97.170 | 530 | 15 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1066 |
| MsG0180004915.01.T01 | MTR_1g072140 | 31.579 | 171 | 112 | 5 | 80 | 249 | 22 | 188 | 4.73e-17 | 82.8 |
| MsG0180004915.01.T01 | MTR_4g125710 | 30.435 | 184 | 112 | 4 | 58 | 228 | 118 | 298 | 1.15e-14 | 75.5 |
| MsG0180004915.01.T01 | MTR_2g012630 | 24.651 | 215 | 146 | 7 | 118 | 330 | 49 | 249 | 4.56e-12 | 69.3 |
| MsG0180004915.01.T01 | MTR_2g012630 | 24.651 | 215 | 146 | 7 | 118 | 330 | 49 | 249 | 5.11e-12 | 69.3 |
| MsG0180004915.01.T01 | MTR_4g071130 | 24.424 | 217 | 141 | 5 | 46 | 260 | 12 | 207 | 2.67e-11 | 67.0 |
| MsG0180004915.01.T01 | MTR_3g075400 | 24.138 | 232 | 152 | 8 | 109 | 332 | 249 | 464 | 8.60e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004915.01.T01 | AT2G47990 | 58.380 | 531 | 209 | 6 | 1 | 529 | 9 | 529 | 0.0 | 599 |
| MsG0180004915.01.T01 | AT4G29830 | 32.653 | 147 | 96 | 2 | 88 | 234 | 161 | 304 | 9.76e-14 | 72.8 |
| MsG0180004915.01.T01 | AT5G50230 | 25.701 | 214 | 140 | 7 | 109 | 319 | 249 | 446 | 7.80e-13 | 71.2 |
| MsG0180004915.01.T01 | AT1G62020 | 25.688 | 218 | 137 | 6 | 46 | 260 | 12 | 207 | 1.85e-12 | 70.9 |
| MsG0180004915.01.T01 | AT2G21390 | 26.452 | 155 | 112 | 2 | 46 | 200 | 12 | 164 | 2.27e-12 | 70.5 |
| MsG0180004915.01.T01 | AT4G02730 | 26.061 | 165 | 116 | 6 | 80 | 242 | 38 | 198 | 4.81e-12 | 67.8 |
| MsG0180004915.01.T01 | AT5G13480 | 24.367 | 316 | 205 | 12 | 46 | 356 | 108 | 394 | 6.58e-12 | 68.6 |
| MsG0180004915.01.T01 | AT5G13480 | 24.367 | 316 | 205 | 12 | 46 | 356 | 85 | 371 | 6.89e-12 | 68.6 |
| MsG0180004915.01.T01 | AT5G13480 | 24.367 | 316 | 205 | 12 | 46 | 356 | 85 | 371 | 7.94e-12 | 68.2 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 8.15e-12 | 68.6 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 8.98e-12 | 68.6 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 9.64e-12 | 68.2 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 9.64e-12 | 68.2 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 9.64e-12 | 68.2 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 9.64e-12 | 68.2 |
| MsG0180004915.01.T01 | AT5G13480 | 24.367 | 316 | 205 | 12 | 46 | 356 | 97 | 383 | 9.72e-12 | 68.2 |
| MsG0180004915.01.T01 | AT3G15980 | 25.287 | 261 | 179 | 10 | 75 | 331 | 5 | 253 | 1.00e-11 | 68.2 |
| MsG0180004915.01.T01 | AT3G49660 | 27.869 | 183 | 121 | 7 | 77 | 253 | 16 | 193 | 1.32e-11 | 66.2 |
| MsG0180004915.01.T01 | AT1G11160 | 21.888 | 233 | 165 | 8 | 119 | 348 | 8 | 226 | 9.43e-11 | 65.1 |
Find 174 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGTTTGGGATTGTGTTCT+TGG | 0.157342 | 1:+84329938 | None:intergenic |
| GGGAGGATTGGGAAGGATTC+GGG | 0.188888 | 1:-84329200 | MsG0180004915.01.T01:CDS |
| GATAAGTTGCATTTAGTTTC+TGG | 0.212466 | 1:-84329581 | MsG0180004915.01.T01:CDS |
| GCAGTCAACTTCACCTTCTT+TGG | 0.223900 | 1:+84328819 | None:intergenic |
| CAAGTATTCTAGTTTGTTAA+TGG | 0.227969 | 1:-84328601 | MsG0180004915.01.T01:CDS |
| GAAGGGATGGAGAATTGTTT+AGG | 0.237807 | 1:+84329875 | None:intergenic |
| TTTGAAGGAAGACCAGTATT+TGG | 0.239917 | 1:+84329910 | None:intergenic |
| GGAGAAACTGGAACTTCTTT+TGG | 0.241910 | 1:-84328652 | MsG0180004915.01.T01:CDS |
| TTGTTAAGGTTTGGGATGTT+AGG | 0.254425 | 1:-84329415 | MsG0180004915.01.T01:CDS |
| GCGAAGGAATAGGGTGGATT+TGG | 0.263005 | 1:+84329839 | None:intergenic |
| GTTAATGGGATTGGCTAATA+AGG | 0.271721 | 1:-84328586 | MsG0180004915.01.T01:CDS |
| TGATTTGGATTTGGAGAAAC+TGG | 0.278153 | 1:-84328664 | MsG0180004915.01.T01:CDS |
| CTAGTTCGGTTTGGAGAATT+AGG | 0.279451 | 1:-84328947 | MsG0180004915.01.T01:CDS |
| GTCAAGATTTGGGATTTAAT+TGG | 0.284624 | 1:-84329284 | MsG0180004915.01.T01:CDS |
| GTGGGAATGCGGTCAAGATT+TGG | 0.293697 | 1:-84329295 | MsG0180004915.01.T01:CDS |
| GTTTGGGATGTTAGGGTTAG+AGG | 0.297753 | 1:-84329407 | MsG0180004915.01.T01:CDS |
| CGAAGGAATAGGGTGGATTT+GGG | 0.304966 | 1:+84329840 | None:intergenic |
| AAGGGATGGAGAATTGTTTA+GGG | 0.316527 | 1:+84329876 | None:intergenic |
| GTATTTGGATTCAGAGGTTT+GGG | 0.323308 | 1:+84329925 | None:intergenic |
| AAATGAGGGCTGATGATATT+AGG | 0.325566 | 1:-84328557 | MsG0180004915.01.T01:CDS |
| TGGGAGGATTGGGAAGGATT+CGG | 0.331014 | 1:-84329201 | MsG0180004915.01.T01:CDS |
| CATTAACAAACTAGAATACT+TGG | 0.351333 | 1:+84328602 | None:intergenic |
| ATTAGCGGCGGCGAAGGAAT+AGG | 0.358527 | 1:+84329829 | None:intergenic |
| GATCAAACAATCGTCCTGTT+AGG | 0.358606 | 1:-84329625 | MsG0180004915.01.T01:CDS |
| AAGATTTGTGTTGGGAGGAT+TGG | 0.360648 | 1:-84329212 | MsG0180004915.01.T01:CDS |
| TCTCCTTTGTTGAGAATTGC+TGG | 0.363442 | 1:-84328435 | MsG0180004915.01.T01:CDS |
| AAGGTGGATGAGAAGGAAGT+TGG | 0.363701 | 1:-84328981 | MsG0180004915.01.T01:CDS |
| TGGGAATGCGGTCAAGATTT+GGG | 0.370097 | 1:-84329294 | MsG0180004915.01.T01:CDS |
| AAGTATTCTAGTTTGTTAAT+GGG | 0.370766 | 1:-84328600 | MsG0180004915.01.T01:CDS |
| CACATCTAACATAATCCTTA+TGG | 0.370873 | 1:+84329492 | None:intergenic |
| GTTGAGGTGTGTTTCTGATT+TGG | 0.376020 | 1:-84328679 | MsG0180004915.01.T01:CDS |
| AGTATTTGGATTCAGAGGTT+TGG | 0.376412 | 1:+84329924 | None:intergenic |
| AGATTTGTGTTGGGAGGATT+GGG | 0.384429 | 1:-84329211 | MsG0180004915.01.T01:CDS |
| GTTGTTTATTTGCCGGGTGG+TGG | 0.385067 | 1:-84329335 | MsG0180004915.01.T01:CDS |
| GTGTGTTTCTGATTTGGATT+TGG | 0.386048 | 1:-84328673 | MsG0180004915.01.T01:CDS |
| TTCTAGTTTGTTAATGGGAT+TGG | 0.396417 | 1:-84328595 | MsG0180004915.01.T01:CDS |
| AGAATTGTTTAGGGATTTGT+TGG | 0.400534 | 1:+84329885 | None:intergenic |
| GGTGGGATGATTGCGACGGC+TGG | 0.402120 | 1:-84329317 | MsG0180004915.01.T01:CDS |
| GGAGGATGTTGTTTATTTGC+CGG | 0.402345 | 1:-84329342 | MsG0180004915.01.T01:CDS |
| TGTTAAGGTTTGGGATGTTA+GGG | 0.406978 | 1:-84329414 | MsG0180004915.01.T01:CDS |
| TTGGGATTGTGTTCTTGGTT+TGG | 0.407303 | 1:+84329943 | None:intergenic |
| ATTCGCCGGATTGTTCTACT+AGG | 0.408446 | 1:-84329052 | MsG0180004915.01.T01:CDS |
| ACCATCTGAGGGTGATTACT+TGG | 0.408850 | 1:-84328850 | MsG0180004915.01.T01:CDS |
| CTCGCTGCTTCTGACCTCTC+CGG | 0.411195 | 1:-84329698 | MsG0180004915.01.T01:CDS |
| ACAAAACAATCAGAACTAAC+CGG | 0.413789 | 1:+84329458 | None:intergenic |
| AGGTGGATGAGAAGGAAGTT+GGG | 0.415544 | 1:-84328980 | MsG0180004915.01.T01:CDS |
| GGGATGATTGCGACGGCTGG+TGG | 0.415876 | 1:-84329314 | MsG0180004915.01.T01:CDS |
| GATTGTTCTACTAGGGTGAT+TGG | 0.420300 | 1:-84329044 | MsG0180004915.01.T01:CDS |
| TGATGCCGTTGTTAGGTATT+GGG | 0.427423 | 1:-84329552 | MsG0180004915.01.T01:CDS |
| ACGGAGACAGGTACGTGATT+TGG | 0.428974 | 1:+84329655 | None:intergenic |
| TAGGATTATGAGTGTTGGTT+TGG | 0.431430 | 1:-84329159 | MsG0180004915.01.T01:CDS |
| GGATAATGAACAAACCTAAC+AGG | 0.439146 | 1:+84329611 | None:intergenic |
| TGGGGTGAGTGAGGCTAGTT+CGG | 0.440336 | 1:-84328961 | MsG0180004915.01.T01:CDS |
| TTAGCGGCGGCGAAGGAATA+GGG | 0.442136 | 1:+84329830 | None:intergenic |
| AGGAGGAGATGGTGGCGGTT+TGG | 0.451413 | 1:+84329768 | None:intergenic |
| ATGATGCCGTTGTTAGGTAT+TGG | 0.452405 | 1:-84329553 | MsG0180004915.01.T01:CDS |
| CATGGTGTTTCGTGGCCATA+AGG | 0.457919 | 1:-84329507 | MsG0180004915.01.T01:CDS |
| GGAGGATTGGGAAGGATTCG+GGG | 0.462374 | 1:-84329199 | MsG0180004915.01.T01:CDS |
| CTAATAAGGTTATTGAAATG+AGG | 0.469043 | 1:-84328572 | MsG0180004915.01.T01:CDS |
| GGATGATTGCGACGGCTGGT+GGG | 0.475951 | 1:-84329313 | MsG0180004915.01.T01:CDS |
| ATAGGGTGGATTTGGGGAGA+AGG | 0.477167 | 1:+84329847 | None:intergenic |
| GAATTGTTTAGGGATTTGTT+GGG | 0.479821 | 1:+84329886 | None:intergenic |
| TGAGTGAGGCTAGTTCGGTT+TGG | 0.481655 | 1:-84328956 | MsG0180004915.01.T01:CDS |
| TCGCTGCTTCTGACCTCTCC+GGG | 0.482840 | 1:-84329697 | MsG0180004915.01.T01:CDS |
| AGCTGAATTAGCGGCGGCGA+AGG | 0.485317 | 1:+84329823 | None:intergenic |
| AAGATTTGGGATTTAATTGG+TGG | 0.487586 | 1:-84329281 | MsG0180004915.01.T01:CDS |
| TGGATTTGGGGAGAAGGTGA+TGG | 0.489356 | 1:+84329853 | None:intergenic |
| CTTGGTTATGAAGCCAAAGA+AGG | 0.489834 | 1:-84328832 | MsG0180004915.01.T01:CDS |
| GAAGGTAAAGGTGGATGAGA+AGG | 0.491134 | 1:-84328988 | MsG0180004915.01.T01:CDS |
| GGTTGCTGTGACGGAGGAAT+TGG | 0.494979 | 1:-84328718 | MsG0180004915.01.T01:CDS |
| GTGTTGGAAGGTAAGAATCC+AGG | 0.495016 | 1:-84328747 | MsG0180004915.01.T01:CDS |
| AAGAGTTTGAGAGCTGAAGA+TGG | 0.496356 | 1:+84329793 | None:intergenic |
| AAACCTCTGAATCCAAATAC+TGG | 0.498293 | 1:-84329922 | MsG0180004915.01.T01:CDS |
| CGGTGACGAAGATTTGTGTT+GGG | 0.498679 | 1:-84329220 | MsG0180004915.01.T01:CDS |
| CAGTATAGGATTATGAGTGT+TGG | 0.498953 | 1:-84329164 | MsG0180004915.01.T01:CDS |
| GTTTGATTACGGTAATATGA+AGG | 0.499792 | 1:-84329120 | MsG0180004915.01.T01:CDS |
| TAGGTATTGGGATGTTAATG+AGG | 0.503737 | 1:-84329540 | MsG0180004915.01.T01:CDS |
| TGATCTAAGACGACGGAGAC+AGG | 0.504217 | 1:+84329643 | None:intergenic |
| CAGTCGTTGCAAGAGATACA+AGG | 0.510806 | 1:-84328465 | MsG0180004915.01.T01:CDS |
| GGAGGAGACGGTGTCGGAGA+AGG | 0.512976 | 1:+84329748 | None:intergenic |
| GGGATTTAATTGGTGGCGGG+AGG | 0.514751 | 1:-84329274 | MsG0180004915.01.T01:CDS |
| TTTGGGGAGAAGGTGATGGA+AGG | 0.518211 | 1:+84329857 | None:intergenic |
| TTGTTTATTTGCCGGGTGGT+GGG | 0.518288 | 1:-84329334 | MsG0180004915.01.T01:CDS |
| ATTATGAGTGTTGGTTTGGA+TGG | 0.518342 | 1:-84329155 | MsG0180004915.01.T01:CDS |
| CGGGAGGCTTGTGTATTCCA+TGG | 0.520699 | 1:-84329258 | MsG0180004915.01.T01:CDS |
| CAAAACAATCAGAACTAACC+GGG | 0.520896 | 1:+84329459 | None:intergenic |
| GTAGTGATGATGCCGTTGTT+AGG | 0.523290 | 1:-84329559 | MsG0180004915.01.T01:CDS |
| GCACTGTTGAGACAGAGATT+CGG | 0.523379 | 1:-84328494 | MsG0180004915.01.T01:CDS |
| CGAGGAGACGAGCATCGTTA+CGG | 0.525065 | 1:+84329717 | None:intergenic |
| TGACGGAGGAATTGGTGTCT+AGG | 0.525193 | 1:-84328710 | MsG0180004915.01.T01:CDS |
| AGGGCATGTGGTTGCTGTGA+CGG | 0.525604 | 1:-84328727 | MsG0180004915.01.T01:CDS |
| TTTGAGAGCTGAAGATGGAG+AGG | 0.526433 | 1:+84329798 | None:intergenic |
| GGAATGAGTCGGATCAGTAT+AGG | 0.527668 | 1:-84329178 | MsG0180004915.01.T01:CDS |
| AGGGTGATTGGAACTTCGAA+TGG | 0.528923 | 1:-84329032 | MsG0180004915.01.T01:CDS |
| GAAGGAAGTTGGGGTGAGTG+AGG | 0.529605 | 1:-84328970 | MsG0180004915.01.T01:CDS |
| TTGGAGAATTAGGCCGGTGG+AGG | 0.532273 | 1:-84328937 | MsG0180004915.01.T01:CDS |
| TTTGGGATTTAATTGGTGGC+GGG | 0.535262 | 1:-84329277 | MsG0180004915.01.T01:CDS |
| GAGGATGTTGTTTATTTGCC+GGG | 0.537889 | 1:-84329341 | MsG0180004915.01.T01:CDS |
| ACTCCGGTCATGGTGTTTCG+TGG | 0.543833 | 1:-84329515 | MsG0180004915.01.T01:CDS |
| GTCACAGCAACCACATGCCC+TGG | 0.544719 | 1:+84328729 | None:intergenic |
| TTCGGTTTGGAGAATTAGGC+CGG | 0.544980 | 1:-84328943 | MsG0180004915.01.T01:CDS |
| AGGTGAGACCAACTCGGTGA+TGG | 0.549474 | 1:-84329387 | MsG0180004915.01.T01:CDS |
| GGAGACGGTGTCGGAGAAGG+AGG | 0.550158 | 1:+84329751 | None:intergenic |
| ATTTGGGATTTAATTGGTGG+CGG | 0.550888 | 1:-84329278 | MsG0180004915.01.T01:CDS |
| CCAACAGACAAAAGCGGCGC+AGG | 0.551615 | 1:+84329077 | None:intergenic |
| AGACCAGTATTTGGATTCAG+AGG | 0.552256 | 1:+84329919 | None:intergenic |
| TTTGTCTGTTGGGTATTCGC+CGG | 0.553778 | 1:-84329066 | MsG0180004915.01.T01:CDS |
| CGTCTTATTATGACTCTCCA+TGG | 0.554512 | 1:+84329241 | None:intergenic |
| TTGTGTTGGGAGGATTGGGA+AGG | 0.555900 | 1:-84329207 | MsG0180004915.01.T01:CDS |
| TTCTTCTCAGTATCCTCCAC+CGG | 0.556705 | 1:+84328924 | None:intergenic |
| GGAGAAGGTGATGGAAGGGA+TGG | 0.558858 | 1:+84329862 | None:intergenic |
| TAATAAGGTTATTGAAATGA+GGG | 0.559117 | 1:-84328571 | MsG0180004915.01.T01:CDS |
| TGGCCACGAAACACCATGAC+CGG | 0.559409 | 1:+84329512 | None:intergenic |
| ATTAAAATCCATCACCGAGT+TGG | 0.559727 | 1:+84329379 | None:intergenic |
| TTGAGAGCTGAAGATGGAGA+GGG | 0.559770 | 1:+84329799 | None:intergenic |
| TTGGGGAGAAGGTGATGGAA+GGG | 0.571747 | 1:+84329858 | None:intergenic |
| GGGTGATTGGAACTTCGAAT+GGG | 0.571974 | 1:-84329031 | MsG0180004915.01.T01:CDS |
| CTTCCAGCAATTCTCAACAA+AGG | 0.572053 | 1:+84328432 | None:intergenic |
| GGTGGAGGATACTGAGAAGA+AGG | 0.572161 | 1:-84328922 | MsG0180004915.01.T01:CDS |
| ACGGTGACGAAGATTTGTGT+TGG | 0.574806 | 1:-84329221 | MsG0180004915.01.T01:CDS |
| GCATGTGGTTGCTGTGACGG+AGG | 0.578362 | 1:-84328724 | MsG0180004915.01.T01:CDS |
| TAATGAGGAAACTCCGGTCA+TGG | 0.578994 | 1:-84329525 | MsG0180004915.01.T01:CDS |
| GTCGGAGAAGGAGGAGATGG+TGG | 0.579404 | 1:+84329760 | None:intergenic |
| ATCGAAGATTTGAATTAACC+CGG | 0.580797 | 1:+84329679 | None:intergenic |
| GTCGCAATCATCCCACCACC+CGG | 0.582767 | 1:+84329323 | None:intergenic |
| GGAGAGGGAAGCTGAATTAG+CGG | 0.586229 | 1:+84329814 | None:intergenic |
| TAGATGTGGTGATTCGTCCC+CGG | 0.586555 | 1:-84329477 | MsG0180004915.01.T01:CDS |
| GAATAAGTTTAGGCATGGTG+AGG | 0.586991 | 1:-84328781 | MsG0180004915.01.T01:CDS |
| GGTGTCGGAGAAGGAGGAGA+TGG | 0.587195 | 1:+84329757 | None:intergenic |
| GGTGGATGAGAAGGAAGTTG+GGG | 0.590324 | 1:-84328979 | MsG0180004915.01.T01:CDS |
| GCTCTTGTGTGCGTGTTGGA+AGG | 0.593734 | 1:-84328759 | MsG0180004915.01.T01:CDS |
| ATCACCCTAGTAGAACAATC+CGG | 0.594271 | 1:+84329047 | None:intergenic |
| TGTTGGAAGGTAAGAATCCA+GGG | 0.600042 | 1:-84328746 | MsG0180004915.01.T01:CDS |
| TAATCATGGTTGTCCTGTGG+AGG | 0.600616 | 1:-84329360 | MsG0180004915.01.T01:CDS |
| TTCGCCGGATTGTTCTACTA+GGG | 0.603643 | 1:-84329051 | MsG0180004915.01.T01:CDS |
| TGAGGCTCTTGTGTGCGTGT+TGG | 0.603731 | 1:-84328763 | MsG0180004915.01.T01:CDS |
| GAATACCCAACAGACAAAAG+CGG | 0.604064 | 1:+84329071 | None:intergenic |
| TGCTGCAAAGAGGAAGGTAA+AGG | 0.605968 | 1:-84329000 | MsG0180004915.01.T01:CDS |
| GAAGGATTCGGGGAATGAGT+CGG | 0.607356 | 1:-84329189 | MsG0180004915.01.T01:CDS |
| GGGTGGTGGGATGATTGCGA+CGG | 0.608618 | 1:-84329321 | MsG0180004915.01.T01:CDS |
| AATTTATGCTGCAAAGAGGA+AGG | 0.608646 | 1:-84329006 | MsG0180004915.01.T01:CDS |
| TGACGAAGATTTGTGTTGGG+AGG | 0.610129 | 1:-84329217 | MsG0180004915.01.T01:CDS |
| GGATGTTAATGAGGAAACTC+CGG | 0.614519 | 1:-84329531 | MsG0180004915.01.T01:CDS |
| ATTAACAAACTAGAATACTT+GGG | 0.616436 | 1:+84328603 | None:intergenic |
| AAATAAACAACATCCTCCAC+AGG | 0.617238 | 1:+84329347 | None:intergenic |
| ACCAAGTAATCACCCTCAGA+TGG | 0.618575 | 1:+84328849 | None:intergenic |
| AGGTAAGAATCCAGGGCATG+TGG | 0.620054 | 1:-84328739 | MsG0180004915.01.T01:CDS |
| AGAGACGGAGGAGACGGTGT+CGG | 0.621983 | 1:+84329742 | None:intergenic |
| GGAGAAGGAGGAGATGGTGG+CGG | 0.624254 | 1:+84329763 | None:intergenic |
| TGCGACGGCTGGTGGGAATG+CGG | 0.625704 | 1:-84329306 | MsG0180004915.01.T01:CDS |
| ACGGAAAGAGACGGAGGAGA+CGG | 0.629393 | 1:+84329736 | None:intergenic |
| CATGGAGAGTCATAATAAGA+CGG | 0.634586 | 1:-84329240 | MsG0180004915.01.T01:CDS |
| AGATTTGAATTAACCCGGAG+AGG | 0.635639 | 1:+84329684 | None:intergenic |
| CAAGGTGAGAAACCATCTGA+GGG | 0.636287 | 1:-84328861 | MsG0180004915.01.T01:CDS |
| GCAAGGTGAGAAACCATCTG+AGG | 0.641081 | 1:-84328862 | MsG0180004915.01.T01:CDS |
| GGATAATTTATGCTGCAAAG+AGG | 0.645362 | 1:-84329010 | MsG0180004915.01.T01:CDS |
| AACATCCCAATACCTAACAA+CGG | 0.648314 | 1:+84329547 | None:intergenic |
| GGTTAGAGGTGAGACCAACT+CGG | 0.655570 | 1:-84329393 | MsG0180004915.01.T01:CDS |
| CGGAGAGGTCAGAAGCAGCG+AGG | 0.655821 | 1:+84329699 | None:intergenic |
| TGAAGGTTACTTATTCGATG+AGG | 0.658542 | 1:-84329103 | MsG0180004915.01.T01:CDS |
| GATTGTTTGATCTAAGACGA+CGG | 0.662044 | 1:+84329636 | None:intergenic |
| GGTTTGGAGAATTAGGCCGG+TGG | 0.670090 | 1:-84328940 | MsG0180004915.01.T01:CDS |
| AAATGCAACTTATCATGACG+CGG | 0.673001 | 1:+84329590 | None:intergenic |
| AGCATCGTTACGGAAAGAGA+CGG | 0.674964 | 1:+84329727 | None:intergenic |
| GAAGGAATAGGGTGGATTTG+GGG | 0.675040 | 1:+84329841 | None:intergenic |
| GATGTTGTTTATTTGCCGGG+TGG | 0.677452 | 1:-84329338 | MsG0180004915.01.T01:CDS |
| GAGGGAAGCTGAATTAGCGG+CGG | 0.678014 | 1:+84329817 | None:intergenic |
| CATAAGGATTATGTTAGATG+TGG | 0.678530 | 1:-84329491 | MsG0180004915.01.T01:CDS |
| GCGGCGGCGAAGGAATAGGG+TGG | 0.680220 | 1:+84329833 | None:intergenic |
| TGCAAAGAGGAAGGTAAAGG+TGG | 0.681900 | 1:-84328997 | MsG0180004915.01.T01:CDS |
| AGTCGTTGCAAGAGATACAA+GGG | 0.683300 | 1:-84328464 | MsG0180004915.01.T01:CDS |
| ATCGTTACGGAAAGAGACGG+AGG | 0.689504 | 1:+84329730 | None:intergenic |
| TGTCTAGGAAGAAGTTGTTG+AGG | 0.703968 | 1:-84328695 | MsG0180004915.01.T01:CDS |
| AAAACAATCAGAACTAACCG+GGG | 0.725083 | 1:+84329460 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAACAAACTAGAATACTT+GGG | + | Chr1:84329820-84329839 | None:intergenic | 20.0% |
| !! | TAATAAGGTTATTGAAATGA+GGG | - | Chr1:84329849-84329868 | MsG0180004915.01.T01:CDS | 20.0% |
| !!! | AAGTATTCTAGTTTGTTAAT+GGG | - | Chr1:84329820-84329839 | MsG0180004915.01.T01:CDS | 20.0% |
| !!! | ATAAGCTTTTGAATAAGTTT+AGG | - | Chr1:84329629-84329648 | MsG0180004915.01.T01:CDS | 20.0% |
| !!! | TATTTTAAGGTGTTTGATTA+CGG | - | Chr1:84329289-84329308 | MsG0180004915.01.T01:CDS | 20.0% |
| !!! | TTTTGAAAACTACTAACTTT+AGG | - | Chr1:84329521-84329540 | MsG0180004915.01.T01:CDS | 20.0% |
| ! | CATTAACAAACTAGAATACT+TGG | + | Chr1:84329821-84329840 | None:intergenic | 25.0% |
| ! | CTAATAAGGTTATTGAAATG+AGG | - | Chr1:84329848-84329867 | MsG0180004915.01.T01:CDS | 25.0% |
| !! | AACTTTAGGTATTTTCAAAG+AGG | - | Chr1:84329535-84329554 | MsG0180004915.01.T01:CDS | 25.0% |
| !! | ACTTTAGGTATTTTCAAAGA+GGG | - | Chr1:84329536-84329555 | MsG0180004915.01.T01:CDS | 25.0% |
| !! | ATGATCATTTTGTTAAGGTT+TGG | - | Chr1:84328996-84329015 | MsG0180004915.01.T01:CDS | 25.0% |
| !! | CTCTTATGATCATTTTGTTA+AGG | - | Chr1:84328991-84329010 | MsG0180004915.01.T01:CDS | 25.0% |
| !! | TGATCATTTTGTTAAGGTTT+GGG | - | Chr1:84328997-84329016 | MsG0180004915.01.T01:CDS | 25.0% |
| !!! | CAAGTATTCTAGTTTGTTAA+TGG | - | Chr1:84329819-84329838 | MsG0180004915.01.T01:CDS | 25.0% |
| ACAAAACAATCAGAACTAAC+CGG | + | Chr1:84328965-84328984 | None:intergenic | 30.0% | |
| AGAATTGTTTAGGGATTTGT+TGG | + | Chr1:84328538-84328557 | None:intergenic | 30.0% | |
| ATCGAAGATTTGAATTAACC+CGG | + | Chr1:84328744-84328763 | None:intergenic | 30.0% | |
| CACATCTAACATAATCCTTA+TGG | + | Chr1:84328931-84328950 | None:intergenic | 30.0% | |
| CATAAGGATTATGTTAGATG+TGG | - | Chr1:84328929-84328948 | MsG0180004915.01.T01:CDS | 30.0% | |
| GTTTGATTACGGTAATATGA+AGG | - | Chr1:84329300-84329319 | MsG0180004915.01.T01:CDS | 30.0% | |
| ! | AAGATTTGGGATTTAATTGG+TGG | - | Chr1:84329139-84329158 | MsG0180004915.01.T01:CDS | 30.0% |
| ! | CTTTTGAATAAGTTTAGGCA+TGG | - | Chr1:84329634-84329653 | MsG0180004915.01.T01:CDS | 30.0% |
| ! | GAATTGTTTAGGGATTTGTT+GGG | + | Chr1:84328537-84328556 | None:intergenic | 30.0% |
| ! | GATAAGTTGCATTTAGTTTC+TGG | - | Chr1:84328839-84328858 | MsG0180004915.01.T01:CDS | 30.0% |
| ! | GTCAAGATTTGGGATTTAAT+TGG | - | Chr1:84329136-84329155 | MsG0180004915.01.T01:CDS | 30.0% |
| !! | AGTTCTGATTGTTTTGTTAC+TGG | - | Chr1:84328968-84328987 | MsG0180004915.01.T01:CDS | 30.0% |
| !! | TGGTTTGGATGGTTATTTTA+AGG | - | Chr1:84329276-84329295 | MsG0180004915.01.T01:CDS | 30.0% |
| !! | TTCTAGTTTGTTAATGGGAT+TGG | - | Chr1:84329825-84329844 | MsG0180004915.01.T01:CDS | 30.0% |
| !!! | GTTTTGAGTTTAGGTTTAAC+TGG | + | Chr1:84328458-84328477 | None:intergenic | 30.0% |
| AAAACAATCAGAACTAACCG+GGG | + | Chr1:84328963-84328982 | None:intergenic | 35.0% | |
| AAACCTCTGAATCCAAATAC+TGG | - | Chr1:84328498-84328517 | MsG0180004915.01.T01:CDS | 35.0% | |
| AAATAAACAACATCCTCCAC+AGG | + | Chr1:84329076-84329095 | None:intergenic | 35.0% | |
| AAATGAGGGCTGATGATATT+AGG | - | Chr1:84329863-84329882 | MsG0180004915.01.T01:CDS | 35.0% | |
| AAATGCAACTTATCATGACG+CGG | + | Chr1:84328833-84328852 | None:intergenic | 35.0% | |
| AACATCCCAATACCTAACAA+CGG | + | Chr1:84328876-84328895 | None:intergenic | 35.0% | |
| AAGGGATGGAGAATTGTTTA+GGG | + | Chr1:84328547-84328566 | None:intergenic | 35.0% | |
| AATTTATGCTGCAAAGAGGA+AGG | - | Chr1:84329414-84329433 | MsG0180004915.01.T01:CDS | 35.0% | |
| AGTATTTGGATTCAGAGGTT+TGG | + | Chr1:84328499-84328518 | None:intergenic | 35.0% | |
| ATTAAAATCCATCACCGAGT+TGG | + | Chr1:84329044-84329063 | None:intergenic | 35.0% | |
| CAAAACAATCAGAACTAACC+GGG | + | Chr1:84328964-84328983 | None:intergenic | 35.0% | |
| CAGTATAGGATTATGAGTGT+TGG | - | Chr1:84329256-84329275 | MsG0180004915.01.T01:CDS | 35.0% | |
| CATGGAGAGTCATAATAAGA+CGG | - | Chr1:84329180-84329199 | MsG0180004915.01.T01:CDS | 35.0% | |
| GGATAATGAACAAACCTAAC+AGG | + | Chr1:84328812-84328831 | None:intergenic | 35.0% | |
| GGATAATTTATGCTGCAAAG+AGG | - | Chr1:84329410-84329429 | MsG0180004915.01.T01:CDS | 35.0% | |
| GTATTTGGATTCAGAGGTTT+GGG | + | Chr1:84328498-84328517 | None:intergenic | 35.0% | |
| TGAAGGTTACTTATTCGATG+AGG | - | Chr1:84329317-84329336 | MsG0180004915.01.T01:CDS | 35.0% | |
| TTTGAAGGAAGACCAGTATT+TGG | + | Chr1:84328513-84328532 | None:intergenic | 35.0% | |
| ! | ATTTGGGATTTAATTGGTGG+CGG | - | Chr1:84329142-84329161 | MsG0180004915.01.T01:CDS | 35.0% |
| ! | GATTGTTTGATCTAAGACGA+CGG | + | Chr1:84328787-84328806 | None:intergenic | 35.0% |
| ! | TGATTTGGATTTGGAGAAAC+TGG | - | Chr1:84329756-84329775 | MsG0180004915.01.T01:CDS | 35.0% |
| ! | TGTTAAGGTTTGGGATGTTA+GGG | - | Chr1:84329006-84329025 | MsG0180004915.01.T01:CDS | 35.0% |
| ! | TTGTTAAGGTTTGGGATGTT+AGG | - | Chr1:84329005-84329024 | MsG0180004915.01.T01:CDS | 35.0% |
| ! | TTTTAATCATGGTTGTCCTG+TGG | - | Chr1:84329057-84329076 | MsG0180004915.01.T01:CDS | 35.0% |
| !! | ATTATGAGTGTTGGTTTGGA+TGG | - | Chr1:84329265-84329284 | MsG0180004915.01.T01:CDS | 35.0% |
| !! | GTGTGTTTCTGATTTGGATT+TGG | - | Chr1:84329747-84329766 | MsG0180004915.01.T01:CDS | 35.0% |
| !! | GTTAATGGGATTGGCTAATA+AGG | - | Chr1:84329834-84329853 | MsG0180004915.01.T01:CDS | 35.0% |
| !! | TAGGATTATGAGTGTTGGTT+TGG | - | Chr1:84329261-84329280 | MsG0180004915.01.T01:CDS | 35.0% |
| !! | TAGGTATTGGGATGTTAATG+AGG | - | Chr1:84328880-84328899 | MsG0180004915.01.T01:CDS | 35.0% |
| !!! | CTTGGTTTGGTTTTGAGTTT+AGG | + | Chr1:84328467-84328486 | None:intergenic | 35.0% |
| !!! | TCGGTGATGGATTTTAATCA+TGG | - | Chr1:84329046-84329065 | MsG0180004915.01.T01:CDS | 35.0% |
| AAGAGTTTGAGAGCTGAAGA+TGG | + | Chr1:84328630-84328649 | None:intergenic | 40.0% | |
| AAGATTTGTGTTGGGAGGAT+TGG | - | Chr1:84329208-84329227 | MsG0180004915.01.T01:CDS | 40.0% | |
| AGACCAGTATTTGGATTCAG+AGG | + | Chr1:84328504-84328523 | None:intergenic | 40.0% | |
| AGATTTGAATTAACCCGGAG+AGG | + | Chr1:84328739-84328758 | None:intergenic | 40.0% | |
| AGATTTGTGTTGGGAGGATT+GGG | - | Chr1:84329209-84329228 | MsG0180004915.01.T01:CDS | 40.0% | |
| AGTCGTTGCAAGAGATACAA+GGG | - | Chr1:84329956-84329975 | MsG0180004915.01.T01:CDS | 40.0% | |
| ATCACCCTAGTAGAACAATC+CGG | + | Chr1:84329376-84329395 | None:intergenic | 40.0% | |
| ATGATGCCGTTGTTAGGTAT+TGG | - | Chr1:84328867-84328886 | MsG0180004915.01.T01:CDS | 40.0% | |
| CTTCCAGCAATTCTCAACAA+AGG | + | Chr1:84329991-84330010 | None:intergenic | 40.0% | |
| CTTGGTTATGAAGCCAAAGA+AGG | - | Chr1:84329588-84329607 | MsG0180004915.01.T01:CDS | 40.0% | |
| GAAGGGATGGAGAATTGTTT+AGG | + | Chr1:84328548-84328567 | None:intergenic | 40.0% | |
| GAATAAGTTTAGGCATGGTG+AGG | - | Chr1:84329639-84329658 | MsG0180004915.01.T01:CDS | 40.0% | |
| GAATACCCAACAGACAAAAG+CGG | + | Chr1:84329352-84329371 | None:intergenic | 40.0% | |
| GATCAAACAATCGTCCTGTT+AGG | - | Chr1:84328795-84328814 | MsG0180004915.01.T01:CDS | 40.0% | |
| GATTGTTCTACTAGGGTGAT+TGG | - | Chr1:84329376-84329395 | MsG0180004915.01.T01:CDS | 40.0% | |
| GGATGTTAATGAGGAAACTC+CGG | - | Chr1:84328889-84328908 | MsG0180004915.01.T01:CDS | 40.0% | |
| TCTCCTTTGTTGAGAATTGC+TGG | - | Chr1:84329985-84330004 | MsG0180004915.01.T01:CDS | 40.0% | |
| TGATGCCGTTGTTAGGTATT+GGG | - | Chr1:84328868-84328887 | MsG0180004915.01.T01:CDS | 40.0% | |
| TGTCTAGGAAGAAGTTGTTG+AGG | - | Chr1:84329725-84329744 | MsG0180004915.01.T01:CDS | 40.0% | |
| TGTTGGAAGGTAAGAATCCA+GGG | - | Chr1:84329674-84329693 | MsG0180004915.01.T01:CDS | 40.0% | |
| TTGGGATTGTGTTCTTGGTT+TGG | + | Chr1:84328480-84328499 | None:intergenic | 40.0% | |
| ! | AGGTATTTTCAAAGAGGGCA+AGG | - | Chr1:84329541-84329560 | MsG0180004915.01.T01:CDS | 40.0% |
| ! | CGTCTTATTATGACTCTCCA+TGG | + | Chr1:84329182-84329201 | None:intergenic | 40.0% |
| ! | GAGGATGTTGTTTATTTGCC+GGG | - | Chr1:84329079-84329098 | MsG0180004915.01.T01:CDS | 40.0% |
| ! | GGAGAAACTGGAACTTCTTT+TGG | - | Chr1:84329768-84329787 | MsG0180004915.01.T01:CDS | 40.0% |
| ! | GGAGGATGTTGTTTATTTGC+CGG | - | Chr1:84329078-84329097 | MsG0180004915.01.T01:CDS | 40.0% |
| ! | GTTGAGGTGTGTTTCTGATT+TGG | - | Chr1:84329741-84329760 | MsG0180004915.01.T01:CDS | 40.0% |
| ! | TTTGGGATTTAATTGGTGGC+GGG | - | Chr1:84329143-84329162 | MsG0180004915.01.T01:CDS | 40.0% |
| !! | CTAGTTCGGTTTGGAGAATT+AGG | - | Chr1:84329473-84329492 | MsG0180004915.01.T01:CDS | 40.0% |
| !!! | AGGGATTTGTTGGGTTTTGA+AGG | + | Chr1:84328528-84328547 | None:intergenic | 40.0% |
| AAGGTGGATGAGAAGGAAGT+TGG | - | Chr1:84329439-84329458 | MsG0180004915.01.T01:CDS | 45.0% | |
| ACCAAGTAATCACCCTCAGA+TGG | + | Chr1:84329574-84329593 | None:intergenic | 45.0% | |
| ACCATCTGAGGGTGATTACT+TGG | - | Chr1:84329570-84329589 | MsG0180004915.01.T01:CDS | 45.0% | |
| ACGGTGACGAAGATTTGTGT+TGG | - | Chr1:84329199-84329218 | MsG0180004915.01.T01:CDS | 45.0% | |
| AGCATCGTTACGGAAAGAGA+CGG | + | Chr1:84328696-84328715 | None:intergenic | 45.0% | |
| AGGGTGATTGGAACTTCGAA+TGG | - | Chr1:84329388-84329407 | MsG0180004915.01.T01:CDS | 45.0% | |
| AGGTGGATGAGAAGGAAGTT+GGG | - | Chr1:84329440-84329459 | MsG0180004915.01.T01:CDS | 45.0% | |
| ATTCGCCGGATTGTTCTACT+AGG | - | Chr1:84329368-84329387 | MsG0180004915.01.T01:CDS | 45.0% | |
| CAAGGTGAGAAACCATCTGA+GGG | - | Chr1:84329559-84329578 | MsG0180004915.01.T01:CDS | 45.0% | |
| CAGTCGTTGCAAGAGATACA+AGG | - | Chr1:84329955-84329974 | MsG0180004915.01.T01:CDS | 45.0% | |
| CGGTGACGAAGATTTGTGTT+GGG | - | Chr1:84329200-84329219 | MsG0180004915.01.T01:CDS | 45.0% | |
| GAAGGTAAAGGTGGATGAGA+AGG | - | Chr1:84329432-84329451 | MsG0180004915.01.T01:CDS | 45.0% | |
| GCACTGTTGAGACAGAGATT+CGG | - | Chr1:84329926-84329945 | MsG0180004915.01.T01:CDS | 45.0% | |
| GCAGTCAACTTCACCTTCTT+TGG | + | Chr1:84329604-84329623 | None:intergenic | 45.0% | |
| GGAATGAGTCGGATCAGTAT+AGG | - | Chr1:84329242-84329261 | MsG0180004915.01.T01:CDS | 45.0% | |
| GGGTGATTGGAACTTCGAAT+GGG | - | Chr1:84329389-84329408 | MsG0180004915.01.T01:CDS | 45.0% | |
| GTGTTGGAAGGTAAGAATCC+AGG | - | Chr1:84329673-84329692 | MsG0180004915.01.T01:CDS | 45.0% | |
| TAATCATGGTTGTCCTGTGG+AGG | - | Chr1:84329060-84329079 | MsG0180004915.01.T01:CDS | 45.0% | |
| TAATGAGGAAACTCCGGTCA+TGG | - | Chr1:84328895-84328914 | MsG0180004915.01.T01:CDS | 45.0% | |
| TGACGAAGATTTGTGTTGGG+AGG | - | Chr1:84329203-84329222 | MsG0180004915.01.T01:CDS | 45.0% | |
| TGCAAAGAGGAAGGTAAAGG+TGG | - | Chr1:84329423-84329442 | MsG0180004915.01.T01:CDS | 45.0% | |
| TGCTGCAAAGAGGAAGGTAA+AGG | - | Chr1:84329420-84329439 | MsG0180004915.01.T01:CDS | 45.0% | |
| TGGGAATGCGGTCAAGATTT+GGG | - | Chr1:84329126-84329145 | MsG0180004915.01.T01:CDS | 45.0% | |
| TTCGCCGGATTGTTCTACTA+GGG | - | Chr1:84329369-84329388 | MsG0180004915.01.T01:CDS | 45.0% | |
| TTCTTCTCAGTATCCTCCAC+CGG | + | Chr1:84329499-84329518 | None:intergenic | 45.0% | |
| TTGAGAGCTGAAGATGGAGA+GGG | + | Chr1:84328624-84328643 | None:intergenic | 45.0% | |
| TTGTTTATTTGCCGGGTGGT+GGG | - | Chr1:84329086-84329105 | MsG0180004915.01.T01:CDS | 45.0% | |
| TTTGAGAGCTGAAGATGGAG+AGG | + | Chr1:84328625-84328644 | None:intergenic | 45.0% | |
| TTTGTCTGTTGGGTATTCGC+CGG | - | Chr1:84329354-84329373 | MsG0180004915.01.T01:CDS | 45.0% | |
| ! | CGAAGGAATAGGGTGGATTT+GGG | + | Chr1:84328583-84328602 | None:intergenic | 45.0% |
| ! | GAAGGAATAGGGTGGATTTG+GGG | + | Chr1:84328582-84328601 | None:intergenic | 45.0% |
| ! | GAGGTTTGGGATTGTGTTCT+TGG | + | Chr1:84328485-84328504 | None:intergenic | 45.0% |
| ! | GATGTTGTTTATTTGCCGGG+TGG | - | Chr1:84329082-84329101 | MsG0180004915.01.T01:CDS | 45.0% |
| ! | GTAGTGATGATGCCGTTGTT+AGG | - | Chr1:84328861-84328880 | MsG0180004915.01.T01:CDS | 45.0% |
| ! | GTTTGGGATGTTAGGGTTAG+AGG | - | Chr1:84329013-84329032 | MsG0180004915.01.T01:CDS | 45.0% |
| !! | TTCGGTTTGGAGAATTAGGC+CGG | - | Chr1:84329477-84329496 | MsG0180004915.01.T01:CDS | 45.0% |
| ACGGAGACAGGTACGTGATT+TGG | + | Chr1:84328768-84328787 | None:intergenic | 50.0% | |
| AGGTAAGAATCCAGGGCATG+TGG | - | Chr1:84329681-84329700 | MsG0180004915.01.T01:CDS | 50.0% | |
| ATCGTTACGGAAAGAGACGG+AGG | + | Chr1:84328693-84328712 | None:intergenic | 50.0% | |
| CATGGTGTTTCGTGGCCATA+AGG | - | Chr1:84328913-84328932 | MsG0180004915.01.T01:CDS | 50.0% | |
| GAAGGATTCGGGGAATGAGT+CGG | - | Chr1:84329231-84329250 | MsG0180004915.01.T01:CDS | 50.0% | |
| GCAAGGTGAGAAACCATCTG+AGG | - | Chr1:84329558-84329577 | MsG0180004915.01.T01:CDS | 50.0% | |
| GGAGAGGGAAGCTGAATTAG+CGG | + | Chr1:84328609-84328628 | None:intergenic | 50.0% | |
| GGTGGAGGATACTGAGAAGA+AGG | - | Chr1:84329498-84329517 | MsG0180004915.01.T01:CDS | 50.0% | |
| GGTGGATGAGAAGGAAGTTG+GGG | - | Chr1:84329441-84329460 | MsG0180004915.01.T01:CDS | 50.0% | |
| GGTTAGAGGTGAGACCAACT+CGG | - | Chr1:84329027-84329046 | MsG0180004915.01.T01:CDS | 50.0% | |
| GTGGGAATGCGGTCAAGATT+TGG | - | Chr1:84329125-84329144 | MsG0180004915.01.T01:CDS | 50.0% | |
| GTTGTTTATTTGCCGGGTGG+TGG | - | Chr1:84329085-84329104 | MsG0180004915.01.T01:CDS | 50.0% | |
| TAGATGTGGTGATTCGTCCC+CGG | - | Chr1:84328943-84328962 | MsG0180004915.01.T01:CDS | 50.0% | |
| TGGATTTGGGGAGAAGGTGA+TGG | + | Chr1:84328570-84328589 | None:intergenic | 50.0% | |
| TGGGAGGATTGGGAAGGATT+CGG | - | Chr1:84329219-84329238 | MsG0180004915.01.T01:CDS | 50.0% | |
| TTGTGTTGGGAGGATTGGGA+AGG | - | Chr1:84329213-84329232 | MsG0180004915.01.T01:CDS | 50.0% | |
| ! | ATAGGGTGGATTTGGGGAGA+AGG | + | Chr1:84328576-84328595 | None:intergenic | 50.0% |
| ! | GCGAAGGAATAGGGTGGATT+TGG | + | Chr1:84328584-84328603 | None:intergenic | 50.0% |
| ! | TGACGGAGGAATTGGTGTCT+AGG | - | Chr1:84329710-84329729 | MsG0180004915.01.T01:CDS | 50.0% |
| ! | TGAGTGAGGCTAGTTCGGTT+TGG | - | Chr1:84329464-84329483 | MsG0180004915.01.T01:CDS | 50.0% |
| ! | TGATCTAAGACGACGGAGAC+AGG | + | Chr1:84328780-84328799 | None:intergenic | 50.0% |
| !! | TTGGGGAGAAGGTGATGGAA+GGG | + | Chr1:84328565-84328584 | None:intergenic | 50.0% |
| !! | TTTGGGGAGAAGGTGATGGA+AGG | + | Chr1:84328566-84328585 | None:intergenic | 50.0% |
| ACGGAAAGAGACGGAGGAGA+CGG | + | Chr1:84328687-84328706 | None:intergenic | 55.0% | |
| ACTCCGGTCATGGTGTTTCG+TGG | - | Chr1:84328905-84328924 | MsG0180004915.01.T01:CDS | 55.0% | |
| AGGGCATGTGGTTGCTGTGA+CGG | - | Chr1:84329693-84329712 | MsG0180004915.01.T01:CDS | 55.0% | |
| ATTAGCGGCGGCGAAGGAAT+AGG | + | Chr1:84328594-84328613 | None:intergenic | 55.0% | |
| CGGGAGGCTTGTGTATTCCA+TGG | - | Chr1:84329162-84329181 | MsG0180004915.01.T01:CDS | 55.0% | |
| GAAGGAAGTTGGGGTGAGTG+AGG | - | Chr1:84329450-84329469 | MsG0180004915.01.T01:CDS | 55.0% | |
| GAGGGAAGCTGAATTAGCGG+CGG | + | Chr1:84328606-84328625 | None:intergenic | 55.0% | |
| GCTCTTGTGTGCGTGTTGGA+AGG | - | Chr1:84329661-84329680 | MsG0180004915.01.T01:CDS | 55.0% | |
| GGAGGATTGGGAAGGATTCG+GGG | - | Chr1:84329221-84329240 | MsG0180004915.01.T01:CDS | 55.0% | |
| GGGAGGATTGGGAAGGATTC+GGG | - | Chr1:84329220-84329239 | MsG0180004915.01.T01:CDS | 55.0% | |
| GGTTTGGAGAATTAGGCCGG+TGG | - | Chr1:84329480-84329499 | MsG0180004915.01.T01:CDS | 55.0% | |
| TGAGGCTCTTGTGTGCGTGT+TGG | - | Chr1:84329657-84329676 | MsG0180004915.01.T01:CDS | 55.0% | |
| TGGCCACGAAACACCATGAC+CGG | + | Chr1:84328911-84328930 | None:intergenic | 55.0% | |
| TTAGCGGCGGCGAAGGAATA+GGG | + | Chr1:84328593-84328612 | None:intergenic | 55.0% | |
| TTGGAGAATTAGGCCGGTGG+AGG | - | Chr1:84329483-84329502 | MsG0180004915.01.T01:CDS | 55.0% | |
| ! | AGGTGAGACCAACTCGGTGA+TGG | - | Chr1:84329033-84329052 | MsG0180004915.01.T01:CDS | 55.0% |
| ! | CGAGGAGACGAGCATCGTTA+CGG | + | Chr1:84328706-84328725 | None:intergenic | 55.0% |
| ! | GGTTGCTGTGACGGAGGAAT+TGG | - | Chr1:84329702-84329721 | MsG0180004915.01.T01:CDS | 55.0% |
| ! | TGGGGTGAGTGAGGCTAGTT+CGG | - | Chr1:84329459-84329478 | MsG0180004915.01.T01:CDS | 55.0% |
| !! | GGAGAAGGTGATGGAAGGGA+TGG | + | Chr1:84328561-84328580 | None:intergenic | 55.0% |
| !! | GGGATTTAATTGGTGGCGGG+AGG | - | Chr1:84329146-84329165 | MsG0180004915.01.T01:CDS | 55.0% |
| !!! | CTGCGCCGCTTTTGTCTGTT+GGG | - | Chr1:84329344-84329363 | MsG0180004915.01.T01:CDS | 55.0% |
| AGAGACGGAGGAGACGGTGT+CGG | + | Chr1:84328681-84328700 | None:intergenic | 60.0% | |
| AGCTGAATTAGCGGCGGCGA+AGG | + | Chr1:84328600-84328619 | None:intergenic | 60.0% | |
| CCAACAGACAAAAGCGGCGC+AGG | + | Chr1:84329346-84329365 | None:intergenic | 60.0% | |
| CTCGCTGCTTCTGACCTCTC+CGG | - | Chr1:84328722-84328741 | MsG0180004915.01.T01:CDS | 60.0% | |
| GCATGTGGTTGCTGTGACGG+AGG | - | Chr1:84329696-84329715 | MsG0180004915.01.T01:CDS | 60.0% | |
| GGATGATTGCGACGGCTGGT+GGG | - | Chr1:84329107-84329126 | MsG0180004915.01.T01:CDS | 60.0% | |
| GTCACAGCAACCACATGCCC+TGG | + | Chr1:84329694-84329713 | None:intergenic | 60.0% | |
| GTCGCAATCATCCCACCACC+CGG | + | Chr1:84329100-84329119 | None:intergenic | 60.0% | |
| GTCGGAGAAGGAGGAGATGG+TGG | + | Chr1:84328663-84328682 | None:intergenic | 60.0% | |
| TCGCTGCTTCTGACCTCTCC+GGG | - | Chr1:84328723-84328742 | MsG0180004915.01.T01:CDS | 60.0% | |
| ! | GGAGAAGGAGGAGATGGTGG+CGG | + | Chr1:84328660-84328679 | None:intergenic | 60.0% |
| ! | GGTGTCGGAGAAGGAGGAGA+TGG | + | Chr1:84328666-84328685 | None:intergenic | 60.0% |
| !! | AGGAGGAGATGGTGGCGGTT+TGG | + | Chr1:84328655-84328674 | None:intergenic | 60.0% |
| !! | GGGTGGTGGGATGATTGCGA+CGG | - | Chr1:84329099-84329118 | MsG0180004915.01.T01:CDS | 60.0% |
| !!! | CCTGCGCCGCTTTTGTCTGT+TGG | - | Chr1:84329343-84329362 | MsG0180004915.01.T01:CDS | 60.0% |
| CGGAGAGGTCAGAAGCAGCG+AGG | + | Chr1:84328724-84328743 | None:intergenic | 65.0% | |
| GGGATGATTGCGACGGCTGG+TGG | - | Chr1:84329106-84329125 | MsG0180004915.01.T01:CDS | 65.0% | |
| GGTGGGATGATTGCGACGGC+TGG | - | Chr1:84329103-84329122 | MsG0180004915.01.T01:CDS | 65.0% | |
| TGCGACGGCTGGTGGGAATG+CGG | - | Chr1:84329114-84329133 | MsG0180004915.01.T01:CDS | 65.0% | |
| ! | GGAGACGGTGTCGGAGAAGG+AGG | + | Chr1:84328672-84328691 | None:intergenic | 65.0% |
| ! | GGAGGAGACGGTGTCGGAGA+AGG | + | Chr1:84328675-84328694 | None:intergenic | 65.0% |
| GCGGCGGCGAAGGAATAGGG+TGG | + | Chr1:84328590-84328609 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 84328425 | 84330017 | 84328425 | ID=MsG0180004915.01;Name=MsG0180004915.01 |
| Chr1 | mRNA | 84328425 | 84330017 | 84328425 | ID=MsG0180004915.01.T01;Parent=MsG0180004915.01;Name=MsG0180004915.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|530 |
| Chr1 | exon | 84328425 | 84330017 | 84328425 | ID=MsG0180004915.01.T01:exon:9256;Parent=MsG0180004915.01.T01 |
| Chr1 | CDS | 84328425 | 84330017 | 84328425 | ID=MsG0180004915.01.T01:cds;Parent=MsG0180004915.01.T01 |
| Gene Sequence |
| Protein sequence |
