AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014383.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014383.01.T01 MTR_3g055920 69.444 324 35 4 1 280 2 305 9.15e-140 409
MsG0380014383.01.T01 MTR_3g055930 79.389 131 27 0 280 410 12 142 6.18e-60 216
MsG0380014383.01.T01 MTR_8g075990 90.000 90 9 0 521 610 417 506 3.92e-50 182
MsG0380014383.01.T01 MTR_3g113720 65.556 90 31 0 521 610 411 500 5.64e-35 139
MsG0380014383.01.T01 MTR_3g056360 62.069 116 34 3 295 410 6 111 3.48e-32 133
MsG0380014383.01.T01 MTR_3g056410 64.545 110 29 3 301 410 3 102 9.07e-32 132
MsG0380014383.01.T01 MTR_3g056380 48.905 137 64 2 276 412 3 133 5.30e-29 123
MsG0380014383.01.T01 MTR_3g056320 59.633 109 39 2 301 408 33 137 1.63e-28 122
MsG0380014383.01.T01 MTR_3g056310 57.658 111 43 2 301 410 27 134 1.99e-28 121
MsG0380014383.01.T01 MTR_3g056620 56.140 114 44 2 301 414 35 142 2.37e-27 118
MsG0380014383.01.T01 MTR_3g456030 44.186 129 72 0 281 409 5 133 3.90e-27 117
MsG0380014383.01.T01 MTR_3g056610 57.273 110 41 2 301 410 3 106 4.78e-27 116
MsG0380014383.01.T01 MTR_3g056615 55.455 110 43 2 301 410 37 140 9.70e-27 110
MsG0380014383.01.T01 MTR_1g078160 51.402 107 52 0 303 409 7 113 2.40e-26 106
MsG0380014383.01.T01 MTR_3g056200 54.545 110 43 2 301 410 35 137 2.79e-26 115
MsG0380014383.01.T01 MTR_1g078190 52.294 109 52 0 301 409 25 133 2.00e-25 112
MsG0380014383.01.T01 MTR_3g055830 47.706 109 57 0 301 409 22 130 2.93e-25 111
MsG0380014383.01.T01 MTR_5g009970 54.545 88 35 2 525 607 216 303 1.46e-24 105
MsG0380014383.01.T01 MTR_3g456060 59.459 74 29 1 301 373 22 95 1.47e-24 99.0
MsG0380014383.01.T01 MTR_3g055720 48.624 109 56 0 301 409 25 133 2.19e-24 108
MsG0380014383.01.T01 MTR_5g009970 54.545 88 35 2 525 607 284 371 3.44e-24 105
MsG0380014383.01.T01 MTR_3g056590 49.074 108 55 0 302 409 26 133 4.18e-24 108
MsG0380014383.01.T01 MTR_5g009970 54.545 88 35 2 525 607 311 398 6.69e-24 105
MsG0380014383.01.T01 MTR_5g009970 54.545 88 35 2 525 607 385 472 8.83e-24 105
MsG0380014383.01.T01 MTR_3g056635 47.706 109 57 0 301 409 25 133 1.80e-23 105
MsG0380014383.01.T01 MTR_3g452130 45.872 109 55 1 301 409 23 127 2.96e-23 99.4
MsG0380014383.01.T01 MTR_3g455910 50.000 110 50 2 301 409 25 130 4.21e-23 104
MsG0380014383.01.T01 MTR_5g010000 54.545 88 35 2 525 607 384 471 1.62e-22 101
MsG0380014383.01.T01 MTR_3g055870 44.000 125 65 2 281 404 2 122 3.55e-22 102
MsG0380014383.01.T01 MTR_7g108925 45.556 90 45 1 525 610 91 180 5.73e-22 95.1
MsG0380014383.01.T01 MTR_2g028480 47.253 91 47 1 518 607 478 568 1.39e-21 99.8
MsG0380014383.01.T01 MTR_3g056300 63.529 85 26 2 327 410 1 81 1.62e-21 99.4
MsG0380014383.01.T01 MTR_3g080810 49.451 91 42 1 524 610 385 475 1.63e-21 98.6
MsG0380014383.01.T01 MTR_5g085730 49.451 91 41 2 525 610 388 478 1.82e-21 98.6
MsG0380014383.01.T01 MTR_3g090540 52.381 84 39 1 525 607 479 562 3.56e-21 98.2
MsG0380014383.01.T01 MTR_5g093590 48.913 92 42 2 525 611 392 483 3.84e-21 97.4
MsG0380014383.01.T01 MTR_3g080190 48.352 91 42 2 525 610 397 487 9.62e-21 96.3
MsG0380014383.01.T01 MTR_4g128810 46.429 84 44 1 525 607 229 312 3.36e-20 93.2
MsG0380014383.01.T01 MTR_4g035930 48.936 94 44 2 521 610 356 449 4.60e-20 94.0
MsG0380014383.01.T01 MTR_8g104820 52.381 84 34 2 525 604 382 463 6.38e-20 93.6
MsG0380014383.01.T01 MTR_3g082440 47.619 84 43 1 525 607 487 570 1.43e-19 93.2
MsG0380014383.01.T01 MTR_3g056190 53.509 114 47 2 301 414 35 142 1.73e-19 93.6
MsG0380014383.01.T01 MTR_4g074960 47.253 91 43 2 525 610 384 474 2.91e-19 92.4
MsG0380014383.01.T01 MTR_3g055740 45.455 110 55 2 301 409 25 130 3.47e-19 92.4
MsG0380014383.01.T01 MTR_0393s0050 47.778 90 42 3 526 610 69 158 3.56e-19 86.3
MsG0380014383.01.T01 MTR_3g117500 48.810 84 39 1 526 605 378 461 3.67e-19 91.3
MsG0380014383.01.T01 MTR_1g037320 41.045 134 57 6 491 607 142 270 8.31e-19 87.8
MsG0380014383.01.T01 MTR_4g035955 47.778 90 43 2 525 610 359 448 9.37e-19 89.7
MsG0380014383.01.T01 MTR_3g069210 47.706 109 48 2 301 409 25 124 1.59e-18 90.5
MsG0380014383.01.T01 MTR_4g035975 45.556 90 45 1 525 610 382 471 1.69e-18 89.4
MsG0380014383.01.T01 MTR_1g088190 46.667 90 44 1 525 610 371 460 2.07e-18 89.0
MsG0380014383.01.T01 MTR_1g037340 46.667 105 50 3 508 607 357 460 3.05e-18 88.6
MsG0380014383.01.T01 MTR_3g455860 53.623 69 31 1 301 368 25 93 8.10e-18 79.3
MsG0380014383.01.T01 MTR_0691s0020 40.323 124 70 3 287 409 11 131 1.22e-17 87.8
MsG0380014383.01.T01 MTR_3g011420 39.316 117 69 2 293 409 17 131 1.51e-17 87.4
MsG0380014383.01.T01 MTR_3g010330 49.425 87 39 3 526 607 373 459 2.66e-17 85.5
MsG0380014383.01.T01 MTR_3g056585 39.815 108 65 0 302 409 26 133 1.37e-16 84.3
MsG0380014383.01.T01 MTR_3g011270 39.024 123 73 2 287 409 11 131 5.15e-16 82.4
MsG0380014383.01.T01 MTR_3g011460 43.478 115 62 3 287 401 11 122 7.50e-16 82.0
MsG0380014383.01.T01 MTR_8g099410 47.674 86 35 4 525 604 383 464 8.10e-16 80.9
MsG0380014383.01.T01 MTR_8g099410 47.674 86 35 4 525 604 383 464 1.01e-15 80.9
MsG0380014383.01.T01 MTR_3g011480 38.710 124 72 3 287 409 11 131 1.06e-15 81.3
MsG0380014383.01.T01 MTR_3g011390 42.342 111 61 3 301 409 25 134 4.39e-15 79.3
MsG0380014383.01.T01 MTR_3g011280 36.434 129 77 4 287 414 11 135 4.69e-15 79.3
MsG0380014383.01.T01 MTR_3g011280 36.434 129 77 4 287 414 11 135 4.73e-15 79.3
MsG0380014383.01.T01 MTR_3g011300 40.741 108 62 2 302 409 26 131 1.02e-14 78.2
MsG0380014383.01.T01 MTR_3g105230 42.045 88 47 2 525 608 372 459 1.78e-14 76.6
MsG0380014383.01.T01 MTR_3g023740 40.909 88 48 2 525 608 372 459 2.06e-14 76.6
MsG0380014383.01.T01 MTR_3g011360 36.800 125 76 3 287 409 11 134 4.66e-14 76.3
MsG0380014383.01.T01 MTR_3g011370 39.252 107 63 2 303 409 27 131 5.09e-14 75.9
MsG0380014383.01.T01 MTR_3g012090 36.842 114 70 2 302 414 26 138 9.11e-13 72.0
MsG0380014383.01.T01 MTR_3g019340 38.318 107 64 2 303 409 5 109 1.87e-12 70.9
MsG0380014383.01.T01 MTR_1g078150 53.226 62 29 0 301 362 25 86 1.97e-12 70.9
MsG0380014383.01.T01 MTR_3g012240 37.168 113 69 1 302 412 72 184 2.87e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014383.01.T01 AT1G50575 57.407 216 66 4 74 287 115 306 5.86e-70 229
MsG0380014383.01.T01 AT1G19940 62.222 90 34 0 521 610 398 487 5.86e-34 136
MsG0380014383.01.T01 AT1G19940 62.222 90 34 0 521 610 398 487 5.86e-34 136
MsG0380014383.01.T01 AT1G75680 59.302 86 35 0 525 610 411 496 4.39e-32 130
MsG0380014383.01.T01 AT5G49720 51.190 84 40 1 525 607 482 565 1.66e-21 99.4
MsG0380014383.01.T01 AT1G22880 52.874 87 37 1 525 607 287 373 2.57e-21 97.1
MsG0380014383.01.T01 AT4G24260 51.807 83 40 0 525 607 483 565 2.57e-21 98.6
MsG0380014383.01.T01 AT1G22880 52.874 87 37 1 525 607 371 457 6.18e-21 96.7
MsG0380014383.01.T01 AT1G23210 48.837 86 40 1 524 605 377 462 8.96e-21 96.3
MsG0380014383.01.T01 AT4G23560 42.373 118 55 3 503 607 336 453 2.00e-20 95.1
MsG0380014383.01.T01 AT1G71380 49.425 87 40 1 525 607 371 457 5.58e-20 94.0
MsG0380014383.01.T01 AT1G70710 47.674 86 41 2 524 605 377 462 6.21e-20 94.0
MsG0380014383.01.T01 AT2G44540 48.913 92 42 2 524 610 381 472 9.57e-20 93.2
MsG0380014383.01.T01 AT2G44550 47.917 96 37 3 524 610 380 471 1.42e-19 92.8
MsG0380014383.01.T01 AT1G65610 45.238 84 45 1 525 607 486 569 2.16e-19 92.8
MsG0380014383.01.T01 AT2G44570 50.562 89 37 3 525 607 383 470 3.16e-19 91.7
MsG0380014383.01.T01 AT2G32990 46.154 91 44 2 525 610 396 486 3.36e-19 91.7
MsG0380014383.01.T01 AT4G39000 45.055 91 46 1 524 610 378 468 4.46e-19 91.3
MsG0380014383.01.T01 AT4G09740 48.276 87 41 1 525 607 367 453 5.74e-19 90.9
MsG0380014383.01.T01 AT1G02800 48.837 86 40 1 526 607 392 477 1.01e-18 90.1
MsG0380014383.01.T01 AT4G39010 51.316 76 33 1 524 595 382 457 1.82e-18 89.4
MsG0380014383.01.T01 AT4G38990 43.678 87 45 1 528 610 385 471 2.91e-18 88.6
MsG0380014383.01.T01 AT2G44560 46.591 88 42 2 525 607 382 469 4.28e-18 88.2
MsG0380014383.01.T01 AT4G02290 44.944 89 45 1 526 610 291 379 4.41e-18 87.4
MsG0380014383.01.T01 AT4G02290 44.944 89 45 1 526 610 403 491 9.85e-18 87.0
MsG0380014383.01.T01 AT1G48930 46.154 91 44 2 525 610 385 475 6.33e-17 85.1
MsG0380014383.01.T01 AT4G11050 44.565 92 46 3 524 610 380 471 1.03e-15 80.9
MsG0380014383.01.T01 AT4G11050 44.565 92 46 3 524 610 380 471 1.19e-15 80.9
MsG0380014383.01.T01 AT4G11050 44.565 92 46 3 524 610 380 471 1.20e-15 80.9
MsG0380014383.01.T01 AT3G43860 42.697 89 47 2 525 609 376 464 3.08e-15 79.0
MsG0380014383.01.T01 AT3G43860 42.697 89 47 2 525 609 376 464 3.08e-15 79.0
MsG0380014383.01.T01 AT1G64390 42.391 92 46 3 525 610 380 470 8.97e-15 78.2

Find 140 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTATGATGTATATATTT+AGG 0.125626 3:-53922072 None:intergenic
TTCATGTCTGCAACTTCTTT+TGG 0.153822 3:-53918837 None:intergenic
CCATTTGCTTCCACTATTAA+AGG 0.206014 3:+53918789 MsG0380014383.01.T01:CDS
ATTCCAGTTAATGCTAAAAC+TGG 0.239887 3:+53922102 MsG0380014383.01.T01:CDS
ATGAGACATATGATGATTTC+AGG 0.248779 3:+53922211 MsG0380014383.01.T01:CDS
GTCATGTGTACTTTGCAATT+TGG 0.276730 3:-53917820 None:intergenic
CAGCTGCATAAAAGCAATTT+AGG 0.284819 3:-53920192 None:intergenic
GTGATGGGTGTTACCTCATT+TGG 0.284831 3:-53914583 None:intergenic
TTTGCAGATAGCAAATCTTT+TGG 0.287696 3:+53916461 MsG0380014383.01.T01:intron
AAAGCAATTTAGGCTCAAAT+TGG 0.294930 3:-53920182 None:intergenic
TGTTTATATTGAAACTATAA+AGG 0.305027 3:+53920138 MsG0380014383.01.T01:CDS
CCAAATGCCACATTAGGATT+TGG 0.305770 3:-53922162 None:intergenic
TTTAGATGTTTGTGAGGATT+GGG 0.324586 3:+53917674 MsG0380014383.01.T01:CDS
TGATGGGTGTTACCTCATTT+GGG 0.333370 3:-53914582 None:intergenic
CTCTATGATGTATATATTTA+GGG 0.334551 3:-53922071 None:intergenic
TTGGGACACCTCTATCATAT+TGG 0.337929 3:-53918818 None:intergenic
ACAAATAGCTTACAAGATTC+AGG 0.342069 3:+53919100 MsG0380014383.01.T01:CDS
GAAACGATACCTGGATCTAT+TGG 0.343800 3:-53920059 None:intergenic
ACGCCTTGGCCATGATGTTT+TGG 0.344989 3:+53920542 MsG0380014383.01.T01:CDS
TGCTCTGCTGGCAGGGAAAC+CGG 0.350625 3:+53916539 MsG0380014383.01.T01:CDS
ACAAGAAAACTCATCTTCAT+TGG 0.353683 3:-53922030 None:intergenic
GATTTCTACTGCATTTCTTC+CGG 0.361087 3:+53917774 MsG0380014383.01.T01:CDS
ACTGCCGTGGTTGCCCTTCC+AGG 0.368491 3:+53917522 MsG0380014383.01.T01:CDS
CCAAATCCTAATGTGGCATT+TGG 0.371582 3:+53922162 MsG0380014383.01.T01:CDS
GGGTCAGATAAGGTCAAATT+TGG 0.375047 3:-53917331 None:intergenic
TTCGTTGAAACGAAAAGGTC+TGG 0.378571 3:+53920575 MsG0380014383.01.T01:CDS
TAATAGCAACTCAGAAGCTT+TGG 0.379535 3:+53917740 MsG0380014383.01.T01:CDS
AGGGGCTGGACCAGGACTAA+TGG 0.385187 3:+53916500 MsG0380014383.01.T01:CDS
GTTGCCCTTCCAGGTGGAAT+TGG 0.399712 3:+53917531 MsG0380014383.01.T01:CDS
CTCATACCCATCCTTTGGTT+CGG 0.408105 3:-53917302 None:intergenic
TTGGACAGCACTACATGGTC+AGG 0.409199 3:+53916480 MsG0380014383.01.T01:CDS
AAGGAGAGGTTGCATCGTTA+TGG 0.409480 3:+53917709 MsG0380014383.01.T01:CDS
TGTTCGTCACCAGGTTAGTT+TGG 0.409673 3:+53917240 MsG0380014383.01.T01:CDS
ATAGCTCCAAATGCCACATT+AGG 0.412153 3:-53922168 None:intergenic
ATCAGTTGCTTCCGTTAGCT+CGG 0.416517 3:+53918764 MsG0380014383.01.T01:intron
GTAATGATGGCATTCTCGTT+TGG 0.420141 3:+53914364 None:intergenic
CGTCCGACATCAAATGGTTC+AGG 0.422103 3:-53919989 None:intergenic
CATATTGTCTTCTTCAGCTT+CGG 0.425442 3:-53918910 None:intergenic
TGTCGTAAAACCTACGGATT+GGG 0.434689 3:+53917271 MsG0380014383.01.T01:CDS
CAGCACAAGAACAATAGCTT+TGG 0.434901 3:+53914469 MsG0380014383.01.T01:CDS
AGATGAGTTGTTCGAGATGC+TGG 0.435190 3:+53917560 MsG0380014383.01.T01:CDS
TATTTGTAGACGAAGAATCT+TGG 0.435934 3:-53919084 None:intergenic
ACCCATCCTTTGGTTCGGAT+TGG 0.438255 3:-53917297 None:intergenic
GACCCGTGTACACTACTAAC+AGG 0.441660 3:+53917349 MsG0380014383.01.T01:CDS
ACTCAAGGTGCTCTGCTGGC+AGG 0.449196 3:+53916531 MsG0380014383.01.T01:CDS
CAAACCTCATACCCATCCTT+TGG 0.449835 3:-53917307 None:intergenic
AAACTAACCTGGTGACGAAC+AGG 0.450431 3:-53917238 None:intergenic
CAAAGGATGGGTATGAGGTT+TGG 0.451279 3:+53917308 MsG0380014383.01.T01:CDS
TTCATCAACAGGAAGGGAAC+AGG 0.452080 3:-53917618 None:intergenic
GGACAACAGCCTCATGATCC+TGG 0.455968 3:+53919020 MsG0380014383.01.T01:CDS
ACGAATCATAGTTCATCAAC+AGG 0.464849 3:-53917629 None:intergenic
GCTAAAACTGGGTGCAAGGA+TGG 0.467282 3:+53922114 MsG0380014383.01.T01:CDS
ATCATATGTCTCATTGAAGA+AGG 0.469679 3:-53922202 None:intergenic
TGTTACTCAAGGTGCTCTGC+TGG 0.469704 3:+53916527 MsG0380014383.01.T01:CDS
TTTCAAGCTCTCAAAGCATA+AGG 0.470958 3:+53914492 MsG0380014383.01.T01:CDS
CACATCATACTTTCAACTAC+TGG 0.472340 3:+53920035 MsG0380014383.01.T01:CDS
TTGGTTACTTCCTTTAATAG+TGG 0.473358 3:-53918799 None:intergenic
CACATTTAATTTAGAAGTCA+CGG 0.486847 3:+53920093 MsG0380014383.01.T01:CDS
TCAACCCGTCCGACATCAAA+TGG 0.488600 3:-53919995 None:intergenic
GTCACTAGTTAGTGCATTGG+AGG 0.489213 3:+53919130 MsG0380014383.01.T01:CDS
TTGTCGTAAAACCTACGGAT+TGG 0.498654 3:+53917270 MsG0380014383.01.T01:CDS
GGTGACGAACAGGTTGAGTC+AGG 0.507132 3:-53917228 None:intergenic
GACTCAACCTGTTCGTCACC+AGG 0.507557 3:+53917231 MsG0380014383.01.T01:CDS
ATGGCTTCGTTGAAACGAAA+AGG 0.508337 3:+53920570 MsG0380014383.01.T01:CDS
TGGCTCAATGAAACGATACC+TGG 0.509049 3:-53920068 None:intergenic
CGAACCAAAGGATGGGTATG+AGG 0.509636 3:+53917303 MsG0380014383.01.T01:CDS
CTCAAGGTGCTCTGCTGGCA+GGG 0.510550 3:+53916532 MsG0380014383.01.T01:CDS
GTGGCATTTGGAGCTATAGT+AGG 0.510610 3:+53922174 MsG0380014383.01.T01:CDS
TTTCAGGTAGAGTATGTGTT+GGG 0.512409 3:+53922000 MsG0380014383.01.T01:intron
CGGCGATATAAGTCAAAAGA+AGG 0.513536 3:+53917794 MsG0380014383.01.T01:CDS
TATGCAGGATTTAAACGCCT+TGG 0.516617 3:+53920528 MsG0380014383.01.T01:intron
TCAGTTGCTTCCGTTAGCTC+GGG 0.519761 3:+53918765 MsG0380014383.01.T01:intron
TTAATTCAACTAGAACGGAT+TGG 0.520861 3:+53917585 MsG0380014383.01.T01:CDS
ATTGTTCTTGTGCTGTGTTG+TGG 0.521244 3:-53914461 None:intergenic
CTGAACCATTTGATGTCGGA+CGG 0.525253 3:+53919990 MsG0380014383.01.T01:CDS
GGAAGTAAAGCTGCACATCC+AGG 0.527443 3:-53919038 None:intergenic
TTGATTTGTCGTAAAACCTA+CGG 0.528649 3:+53917265 MsG0380014383.01.T01:CDS
GCCACATTAGGATTTGGTTG+AGG 0.529601 3:-53922156 None:intergenic
CCTTTAATAGTGGAAGCAAA+TGG 0.531188 3:-53918789 None:intergenic
AGCAAATGGTCCCGAGCTAA+CGG 0.531567 3:-53918775 None:intergenic
AGCACTACATGGTCAGGGGC+TGG 0.532037 3:+53916486 MsG0380014383.01.T01:CDS
GGAAGTAACCAATATGATAG+AGG 0.532628 3:+53918810 MsG0380014383.01.T01:CDS
ACATGGTCAGGGGCTGGACC+AGG 0.534351 3:+53916492 MsG0380014383.01.T01:CDS
CGAACAGGTTGAGTCAGGTT+GGG 0.534694 3:-53917223 None:intergenic
TAGTGTACACGGGTCAGATA+AGG 0.537023 3:-53917341 None:intergenic
TAAGTCACTAGTTAGTGCAT+TGG 0.538080 3:+53919127 MsG0380014383.01.T01:CDS
GATTGGGGAACTGTCTCTAA+AGG 0.541611 3:+53917690 MsG0380014383.01.T01:CDS
ACTACTGGTCCAATAGATCC+AGG 0.546915 3:+53920050 MsG0380014383.01.T01:CDS
ACTTCTAAATTAAATGTGGA+TGG 0.546956 3:-53920088 None:intergenic
TGAACCATTTGATGTCGGAC+GGG 0.547568 3:+53919991 MsG0380014383.01.T01:CDS
ACGAACAGGTTGAGTCAGGT+TGG 0.547639 3:-53917224 None:intergenic
ATCCAATCCGAACCAAAGGA+TGG 0.547894 3:+53917295 MsG0380014383.01.T01:CDS
TCGTTGAAACGAAAAGGTCT+GGG 0.554472 3:+53920576 MsG0380014383.01.T01:CDS
TAATGCTAAAACTGGGTGCA+AGG 0.555261 3:+53922110 MsG0380014383.01.T01:CDS
ATCATAGTTCATCAACAGGA+AGG 0.558794 3:-53917625 None:intergenic
TAGTTGAAAGTATGATGTGC+TGG 0.559524 3:-53920031 None:intergenic
CCTAAATATATACATCATAG+AGG 0.561318 3:+53922072 MsG0380014383.01.T01:CDS
TTAGATGTTTGTGAGGATTG+GGG 0.562429 3:+53917675 MsG0380014383.01.T01:CDS
AGAGGTTGCATCGTTATGGA+AGG 0.564199 3:+53917713 MsG0380014383.01.T01:CDS
ATTTCAGGTAGAGTATGTGT+TGG 0.566116 3:+53921999 MsG0380014383.01.T01:intron
TCATATGTCTCATTGAAGAA+GGG 0.567516 3:-53922201 None:intergenic
TGGACAGCACTACATGGTCA+GGG 0.568716 3:+53916481 MsG0380014383.01.T01:CDS
GAGTACCAATTCCACCTGGA+AGG 0.573582 3:-53917536 None:intergenic
AGTACCAATTCCACCTGGAA+GGG 0.580896 3:-53917535 None:intergenic
TGGCGTTAATTCAACTAGAA+CGG 0.581141 3:+53917580 MsG0380014383.01.T01:CDS
CATCCTGTTAGTAGTGTACA+CGG 0.582402 3:-53917352 None:intergenic
GGATTGGATACCCAATCCGT+AGG 0.584097 3:-53917281 None:intergenic
AATCATTTGAGTTTGATGAG+AGG 0.587148 3:+53914554 MsG0380014383.01.T01:CDS
AAATCAAAACCAAACTAACC+TGG 0.593380 3:-53917249 None:intergenic
TCCACCTGGAAGGGCAACCA+CGG 0.594829 3:-53917526 None:intergenic
CTAATGGATGCTGTTACTCA+AGG 0.595662 3:+53916516 MsG0380014383.01.T01:CDS
GCATTTGGAGCTATAGTAGG+TGG 0.597872 3:+53922177 MsG0380014383.01.T01:CDS
CGTGACTTCTAAATTAAATG+TGG 0.598392 3:-53920092 None:intergenic
GTAACAGCATCCATTAGTCC+TGG 0.598981 3:-53916510 None:intergenic
CATATGTCTCATTGAAGAAG+GGG 0.599968 3:-53922200 None:intergenic
TTCATTTGATAAAACTGCCG+TGG 0.600242 3:+53917509 MsG0380014383.01.T01:CDS
CCATATGCACCAAAACATCA+TGG 0.601139 3:-53920551 None:intergenic
TGAGAGGAAAAGCCCAAATG+AGG 0.601940 3:+53914570 MsG0380014383.01.T01:CDS
GCACCAAAACATCATGGCCA+AGG 0.602715 3:-53920545 None:intergenic
TCCAATCCGAACCAAAGGAT+GGG 0.604006 3:+53917296 MsG0380014383.01.T01:CDS
TTCCAGTTAATGCTAAAACT+GGG 0.612319 3:+53922103 MsG0380014383.01.T01:CDS
TCATAGTTCATCAACAGGAA+GGG 0.619618 3:-53917624 None:intergenic
GGGTATCCAATCCGAACCAA+AGG 0.621974 3:+53917291 MsG0380014383.01.T01:CDS
GCCGTGGTTGCCCTTCCAGG+TGG 0.626815 3:+53917525 MsG0380014383.01.T01:CDS
GCACCTGAACCATTTGATGT+CGG 0.631127 3:+53919986 MsG0380014383.01.T01:CDS
ACCTCAACCAAATCCTAATG+TGG 0.631977 3:+53922155 MsG0380014383.01.T01:CDS
CGTGTACACTACTAACAGGA+TGG 0.635772 3:+53917353 MsG0380014383.01.T01:CDS
TCTAGAGTACCAATTCCACC+TGG 0.637363 3:-53917540 None:intergenic
GCTGCACATCCAGGATCATG+AGG 0.642394 3:-53919029 None:intergenic
GGCTAGTCGATGCTGTAGTG+AGG 0.642446 3:+53917481 MsG0380014383.01.T01:CDS
GGACAGCACTACATGGTCAG+GGG 0.658121 3:+53916482 MsG0380014383.01.T01:CDS
GGGAACTGTCTCTAAAGGAG+AGG 0.658219 3:+53917695 MsG0380014383.01.T01:CDS
TGATGAATATATGATATGTG+AGG 0.659084 3:+53918998 MsG0380014383.01.T01:CDS
GGGTTTGATGAGCACAACAT+CGG 0.666045 3:-53914392 None:intergenic
GATGAATATATGATATGTGA+GGG 0.669067 3:+53918999 MsG0380014383.01.T01:CDS
TTTGATGAGCACAACATCGG+AGG 0.672092 3:-53914389 None:intergenic
GAAGAAGACAATATGCGCGA+CGG 0.675900 3:+53918918 MsG0380014383.01.T01:CDS
AAATGCAGTAGAAATCAGCA+AGG 0.696467 3:-53917767 None:intergenic
GGTGCAAGGATGGATTCAAG+TGG 0.704525 3:+53922124 MsG0380014383.01.T01:CDS
ATCCTGTTAGTAGTGTACAC+GGG 0.723050 3:-53917351 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAAAAAGAATATCA+AGG - Chr3:53921515-53921534 None:intergenic 10.0%
!!! AAAATTTTAATGTAAGTTAA+AGG - Chr3:53920330-53920349 None:intergenic 10.0%
!!! AAATTTTTACGAATAAAAAA+AGG + Chr3:53919761-53919780 MsG0380014383.01.T01:intron 10.0%
!!! TTAACTTACATTAAAATTTT+TGG + Chr3:53920330-53920349 MsG0380014383.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+AGG - Chr3:53918370-53918389 None:intergenic 10.0%
!! AAATTGACAGAAAAAATAAT+TGG - Chr3:53917076-53917095 None:intergenic 15.0%
!! AATTAAAAAACTGCAATAAA+TGG + Chr3:53921383-53921402 MsG0380014383.01.T01:intron 15.0%
!! AATTGACAGAAAAAATAATT+GGG - Chr3:53917075-53917094 None:intergenic 15.0%
!! AGCATTTCATTAATAAATAA+TGG - Chr3:53918336-53918355 None:intergenic 15.0%
!! CTTTAAACATGTTATAATTA+TGG - Chr3:53919599-53919618 None:intergenic 15.0%
!! GGTGTAAAAAATAATAAAAA+TGG + Chr3:53919802-53919821 MsG0380014383.01.T01:intron 15.0%
!! TATTATGTCATATATGAATT+CGG - Chr3:53919300-53919319 None:intergenic 15.0%
!! TGTTTATATTGAAACTATAA+AGG + Chr3:53920138-53920157 MsG0380014383.01.T01:CDS 15.0%
!!! AAACTATTGTATTTTTACTT+TGG + Chr3:53915267-53915286 MsG0380014383.01.T01:intron 15.0%
!!! AACTATTTTGATTTAAATTC+AGG + Chr3:53917436-53917455 MsG0380014383.01.T01:intron 15.0%
!!! ATTATTTTTTACACCATTTT+TGG - Chr3:53919797-53919816 None:intergenic 15.0%
!!! GATAAGATTTTCTTAATTTT+AGG - Chr3:53918213-53918232 None:intergenic 15.0%
!!! GGTTATATGATTATTTTAAA+TGG + Chr3:53920434-53920453 MsG0380014383.01.T01:intron 15.0%
!!! GTATTTTTTTACATTCAAAT+AGG + Chr3:53917375-53917394 MsG0380014383.01.T01:intron 15.0%
!!! TTTAAATTACACTATTTTTG+AGG - Chr3:53918490-53918509 None:intergenic 15.0%
!!! TTTGTTAATATTGATGATAA+AGG + Chr3:53921847-53921866 MsG0380014383.01.T01:intron 15.0%
!! AAATAATTACCAAGTATTCA+AGG - Chr3:53917882-53917901 None:intergenic 20.0%
!! AAATTAAATTATTCCCTTGA+TGG - Chr3:53918151-53918170 None:intergenic 20.0%
!! AGGATAATCATAACAATTAA+TGG + Chr3:53921109-53921128 MsG0380014383.01.T01:intron 20.0%
!! AGTATTACATGAATTAAATC+TGG + Chr3:53921541-53921560 MsG0380014383.01.T01:intron 20.0%
!! ATAGCGTGTTAAATAAAATT+AGG + Chr3:53919446-53919465 MsG0380014383.01.T01:intron 20.0%
!! ATCAATGTAAATGCATAAAT+CGG + Chr3:53921431-53921450 MsG0380014383.01.T01:intron 20.0%
!! ATGAAGAACTAATAATTGAA+GGG + Chr3:53921873-53921892 MsG0380014383.01.T01:intron 20.0%
!! ATTATGTCATATATGAATTC+GGG - Chr3:53919299-53919318 None:intergenic 20.0%
!! CTCTATGATGTATATATTTA+GGG - Chr3:53922074-53922093 None:intergenic 20.0%
!! GAAAAAATGTTTATAAGTGA+GGG + Chr3:53914646-53914665 MsG0380014383.01.T01:intron 20.0%
!! GACACAATTAACATAATATT+AGG - Chr3:53921952-53921971 None:intergenic 20.0%
!! GTCATAAATAGAAATAAAAG+AGG + Chr3:53919364-53919383 MsG0380014383.01.T01:intron 20.0%
!! TAAGTGAATCTAAACAATAA+TGG + Chr3:53915022-53915041 MsG0380014383.01.T01:intron 20.0%
!! TGAAAAAATGTTTATAAGTG+AGG + Chr3:53914645-53914664 MsG0380014383.01.T01:intron 20.0%
!! TTTGTTTATGAAATTAAGAG+TGG - Chr3:53918188-53918207 None:intergenic 20.0%
!!! AATGCAACTTATTTTGAATT+AGG - Chr3:53921737-53921756 None:intergenic 20.0%
!!! AATGTAAGTTAAAGGTATTA+AGG - Chr3:53920322-53920341 None:intergenic 20.0%
!!! ATGCAACTTATTTTGAATTA+GGG - Chr3:53921736-53921755 None:intergenic 20.0%
!!! ATTAATTTTGTAAGACTGTT+TGG - Chr3:53914983-53915002 None:intergenic 20.0%
!!! CAGTTTTTTAATTCAAATTC+TGG - Chr3:53921376-53921395 None:intergenic 20.0%
!!! CATAATTTTGTTTGAAATTG+TGG + Chr3:53917130-53917149 MsG0380014383.01.T01:intron 20.0%
!!! GAATATCTGTTTTATGAATT+CGG + Chr3:53921224-53921243 MsG0380014383.01.T01:intron 20.0%
!!! GTACTTTTTTTGATTATGTA+AGG - Chr3:53915895-53915914 None:intergenic 20.0%
!!! TTTTTCTTCTTCAAAATTAC+AGG + Chr3:53916147-53916166 MsG0380014383.01.T01:intron 20.0%
! AAACAAAAACTCTTATCAAG+AGG - Chr3:53917850-53917869 None:intergenic 25.0%
! AAAGATAGATGAATTGAAAC+TGG - Chr3:53921464-53921483 None:intergenic 25.0%
! AAATGTAAACATGTTGGAAA+AGG + Chr3:53921341-53921360 MsG0380014383.01.T01:intron 25.0%
! AACAAAAACTCTTATCAAGA+GGG - Chr3:53917849-53917868 None:intergenic 25.0%
! AATATAATCTTCCTTCTAGT+GGG + Chr3:53915504-53915523 MsG0380014383.01.T01:intron 25.0%
! AATGTAAACATGTTGGAAAA+GGG + Chr3:53921342-53921361 MsG0380014383.01.T01:intron 25.0%
! ACTTAAGATGCAATTTATGA+TGG + Chr3:53915638-53915657 MsG0380014383.01.T01:intron 25.0%
! ACTTCTAAATTAAATGTGGA+TGG - Chr3:53920091-53920110 None:intergenic 25.0%
! AGATAGAAAGACATTTGATT+TGG + Chr3:53916717-53916736 MsG0380014383.01.T01:intron 25.0%
! ATGCATTTACATTGATAAGT+AGG - Chr3:53921427-53921446 None:intergenic 25.0%
! CATAAATAAGATCCAAGATA+AGG - Chr3:53915391-53915410 None:intergenic 25.0%
! CATGAAGAACTAATAATTGA+AGG + Chr3:53921872-53921891 MsG0380014383.01.T01:intron 25.0%
! CCTAAATATATACATCATAG+AGG + Chr3:53922072-53922091 MsG0380014383.01.T01:CDS 25.0%
! CCTCTATGATGTATATATTT+AGG - Chr3:53922075-53922094 None:intergenic 25.0%
! GATGAATATATGATATGTGA+GGG + Chr3:53918999-53919018 MsG0380014383.01.T01:CDS 25.0%
! GGTGTAAATTACAATAGTTT+AGG - Chr3:53917940-53917959 None:intergenic 25.0%
! TAACATTAAAAACCTATGCA+AGG - Chr3:53915150-53915169 None:intergenic 25.0%
! TACAAAAATTGATCTGTGAT+TGG - Chr3:53914518-53914537 None:intergenic 25.0%
! TACAAATGTAGTATACCATA+AGG + Chr3:53921673-53921692 MsG0380014383.01.T01:intron 25.0%
! TAGAACAAACTGTTAAACAA+TGG - Chr3:53916667-53916686 None:intergenic 25.0%
! TATGAACTCATAAACCAATT+AGG + Chr3:53916193-53916212 MsG0380014383.01.T01:intron 25.0%
! TATGGTATACTACATTTGTA+TGG - Chr3:53921673-53921692 None:intergenic 25.0%
! TATTATATCTAGTATGGACT+TGG + Chr3:53915671-53915690 MsG0380014383.01.T01:intron 25.0%
! TCTAACAAGAACAACAATAT+TGG + Chr3:53918034-53918053 MsG0380014383.01.T01:intron 25.0%
! TCTTTGAATAGTTAAGTCTA+TGG - Chr3:53918635-53918654 None:intergenic 25.0%
! TGAAGAACTAATAATTGAAG+GGG + Chr3:53921874-53921893 MsG0380014383.01.T01:intron 25.0%
! TGATGAATATATGATATGTG+AGG + Chr3:53918998-53919017 MsG0380014383.01.T01:CDS 25.0%
! TGCAAAGTATAGTCAAATAT+CGG - Chr3:53915795-53915814 None:intergenic 25.0%
! TGGCAAATTAAAACAATTTC+AGG + Chr3:53921984-53922003 MsG0380014383.01.T01:intron 25.0%
! TGTGTCAGAAAAAACATTAT+TGG - Chr3:53916378-53916397 None:intergenic 25.0%
! TTATACATAATAAGCACTTG+TGG - Chr3:53914805-53914824 None:intergenic 25.0%
! TTCTTATGATAAGTTATGAC+TGG - Chr3:53918548-53918567 None:intergenic 25.0%
! TTGTAATTGACCATATAACA+TGG + Chr3:53916019-53916038 MsG0380014383.01.T01:intron 25.0%
!! AAAGTCTGAGATTATTAGTT+AGG - Chr3:53921915-53921934 None:intergenic 25.0%
!! AGACTGAAAAAGTTTTTGTT+TGG + Chr3:53916406-53916425 MsG0380014383.01.T01:intron 25.0%
!! AGTTTTCTTTCATATTATGC+AGG + Chr3:53920498-53920517 MsG0380014383.01.T01:intron 25.0%
!! ATCTCTAAGAAGGAAAAAAA+TGG + Chr3:53915974-53915993 MsG0380014383.01.T01:intron 25.0%
!! CACATTTAATTTAGAAGTCA+CGG + Chr3:53920093-53920112 MsG0380014383.01.T01:CDS 25.0%
!! GTTTTCTTTCATATTATGCA+GGG + Chr3:53920499-53920518 MsG0380014383.01.T01:intron 25.0%
!! TAATTCATGTTTGTGCTTTT+TGG - Chr3:53921292-53921311 None:intergenic 25.0%
!! TAATTTTCTGATGGTAAGTA+TGG - Chr3:53916621-53916640 None:intergenic 25.0%
!! TCAGGCTTTTATGTAAATTA+AGG + Chr3:53914706-53914725 MsG0380014383.01.T01:intron 25.0%
!! TTTGAAAAAGTCATTAGTCT+CGG - Chr3:53919063-53919082 None:intergenic 25.0%
!!! AAAATTTTTGGCCTCTATTT+CGG + Chr3:53920342-53920361 MsG0380014383.01.T01:intron 25.0%
!!! AGCTATGTTTTTGTTGTTTA+TGG + Chr3:53915207-53915226 MsG0380014383.01.T01:intron 25.0%
!!! GCTTTTTTGAATTTTTACTC+TGG + Chr3:53920897-53920916 MsG0380014383.01.T01:intron 25.0%
!!! TGCAACTTATTTTGAATTAG+GGG - Chr3:53921735-53921754 None:intergenic 25.0%
!!! TTGTTTGAAATTGTGGTTTT+TGG + Chr3:53917137-53917156 MsG0380014383.01.T01:intron 25.0%
AAACAATTCCTCTTCCTAAT+TGG - Chr3:53916210-53916229 None:intergenic 30.0%
AAAGCAATTTAGGCTCAAAT+TGG - Chr3:53920185-53920204 None:intergenic 30.0%
AAAGCACAAACATGAATTAG+TGG + Chr3:53921293-53921312 MsG0380014383.01.T01:intron 30.0%
AAATCAAAACCAAACTAACC+TGG - Chr3:53917252-53917271 None:intergenic 30.0%
AAGCACAAACATGAATTAGT+GGG + Chr3:53921294-53921313 MsG0380014383.01.T01:intron 30.0%
AATACTACTGCTAAATTGGT+CGG - Chr3:53920710-53920729 None:intergenic 30.0%
AATGGAGTTAGATGAAAATG+TGG - Chr3:53918318-53918337 None:intergenic 30.0%
ACAAATAGCTTACAAGATTC+AGG + Chr3:53919100-53919119 MsG0380014383.01.T01:CDS 30.0%
ACAAGAAAACTCATCTTCAT+TGG - Chr3:53922033-53922052 None:intergenic 30.0%
ACCTAAGACTCATTTAAACA+AGG + Chr3:53915560-53915579 MsG0380014383.01.T01:intron 30.0%
ACTCTTTAACAAGTAAGTGA+TGG - Chr3:53914602-53914621 None:intergenic 30.0%
AGAAAGAAATCAAAGAAGTG+TGG + Chr3:53918564-53918583 MsG0380014383.01.T01:intron 30.0%
AGGGTGTATTATATCTAGTA+TGG + Chr3:53915665-53915684 MsG0380014383.01.T01:intron 30.0%
AGGTGAAAATGTAAACATGT+TGG + Chr3:53921335-53921354 MsG0380014383.01.T01:intron 30.0%
ATACTAGTGGAAAAAAACCA+TGG + Chr3:53919153-53919172 MsG0380014383.01.T01:intron 30.0%
ATATGACAAAGCAAAACTGT+TGG - Chr3:53916803-53916822 None:intergenic 30.0%
ATATGGTCAATTACAAGCAA+AGG - Chr3:53916015-53916034 None:intergenic 30.0%
ATCAAATCATCTTTGACTCA+AGG + Chr3:53919186-53919205 MsG0380014383.01.T01:intron 30.0%
ATCATATGTCTCATTGAAGA+AGG - Chr3:53922205-53922224 None:intergenic 30.0%
ATGAGACATATGATGATTTC+AGG + Chr3:53922211-53922230 MsG0380014383.01.T01:CDS 30.0%
ATTAATGGTGAGATTGATGA+AGG - Chr3:53918688-53918707 None:intergenic 30.0%
ATTCCAGTTAATGCTAAAAC+TGG + Chr3:53922102-53922121 MsG0380014383.01.T01:CDS 30.0%
ATTTGTTTGATAGAACTCTC+CGG - Chr3:53916067-53916086 None:intergenic 30.0%
CAGAAAATTACCTTACTTGA+AGG + Chr3:53916631-53916650 MsG0380014383.01.T01:intron 30.0%
CCATGTTTAAGCAATAACAA+AGG - Chr3:53921712-53921731 None:intergenic 30.0%
CCTAAGACTCATTTAAACAA+GGG + Chr3:53915561-53915580 MsG0380014383.01.T01:intron 30.0%
CGTGACTTCTAAATTAAATG+TGG - Chr3:53920095-53920114 None:intergenic 30.0%
CTCTAATACTACTGCTAAAT+TGG - Chr3:53920714-53920733 None:intergenic 30.0%
CTCTTTAACAAGTAAGTGAT+GGG - Chr3:53914601-53914620 None:intergenic 30.0%
GAATATAATCTTCCTTCTAG+TGG + Chr3:53915503-53915522 MsG0380014383.01.T01:intron 30.0%
GACAGAAAAAATAATTGGGT+CGG - Chr3:53917071-53917090 None:intergenic 30.0%
GAGTCAAAGATGATTTGATT+TGG - Chr3:53919185-53919204 None:intergenic 30.0%
GATAACGATCCTTAATATTG+CGG - Chr3:53915109-53915128 None:intergenic 30.0%
GCGTGTTAAATAAAATTAGG+AGG + Chr3:53919449-53919468 MsG0380014383.01.T01:intron 30.0%
GCTAAAATACAATGTTGACA+TGG + Chr3:53920765-53920784 MsG0380014383.01.T01:intron 30.0%
GGATTTCTTTACTCATTAAC+AGG + Chr3:53921315-53921334 MsG0380014383.01.T01:intron 30.0%
GGTAATCAGTTAACAGAAAT+TGG + Chr3:53915288-53915307 MsG0380014383.01.T01:intron 30.0%
TAACTTTCACCTTGAATACT+TGG + Chr3:53917870-53917889 MsG0380014383.01.T01:intron 30.0%
TACAAAAAATCACCACTCTT+AGG + Chr3:53918090-53918109 MsG0380014383.01.T01:intron 30.0%
TAGATGAATTGAAACTGGAT+TGG - Chr3:53921459-53921478 None:intergenic 30.0%
TAGTCAGAAACAAACAAATG+AGG + Chr3:53918268-53918287 MsG0380014383.01.T01:intron 30.0%
TATTTGTAGACGAAGAATCT+TGG - Chr3:53919087-53919106 None:intergenic 30.0%
TCATAAATCGTGTGAAATAG+TGG + Chr3:53915723-53915742 MsG0380014383.01.T01:intron 30.0%
TCATATGTCTCATTGAAGAA+GGG - Chr3:53922204-53922223 None:intergenic 30.0%
TGAGAGACATCAATATTTCT+TGG - Chr3:53918235-53918254 None:intergenic 30.0%
TGGACCACATCAAATAAAAT+AGG + Chr3:53921633-53921652 MsG0380014383.01.T01:intron 30.0%
TGTTGAGACTGTATATCTTT+GGG - Chr3:53918399-53918418 None:intergenic 30.0%
TTAATTCAACTAGAACGGAT+TGG + Chr3:53917585-53917604 MsG0380014383.01.T01:CDS 30.0%
TTATTTAACACGCTATTGTC+AGG - Chr3:53919442-53919461 None:intergenic 30.0%
TTCCAGTTAATGCTAAAACT+GGG + Chr3:53922103-53922122 MsG0380014383.01.T01:CDS 30.0%
TTGCGTGTAATAAATACTCA+AGG + Chr3:53920823-53920842 MsG0380014383.01.T01:intron 30.0%
TTGGTTACTTCCTTTAATAG+TGG - Chr3:53918802-53918821 None:intergenic 30.0%
TTGTTGAGACTGTATATCTT+TGG - Chr3:53918400-53918419 None:intergenic 30.0%
TTTAGATGTTTGTGAGGATT+GGG + Chr3:53917674-53917693 MsG0380014383.01.T01:CDS 30.0%
TTTCTCCAACTCATGAAAAA+GGG - Chr3:53920369-53920388 None:intergenic 30.0%
TTTGAACACAATCACAATTG+AGG + Chr3:53915054-53915073 MsG0380014383.01.T01:intron 30.0%
TTTGAGTCCAATGATTCTAA+GGG - Chr3:53915920-53915939 None:intergenic 30.0%
! AAAAGAATGCATGTGGATTA+TGG + Chr3:53920386-53920405 MsG0380014383.01.T01:intron 30.0%
! AAAATTAAAGTTGACTCAGC+TGG + Chr3:53919838-53919857 MsG0380014383.01.T01:intron 30.0%
! AAACATAGCTTTTTGTCACT+AGG - Chr3:53915197-53915216 None:intergenic 30.0%
! AAAGAATGCATGTGGATTAT+GGG + Chr3:53920387-53920406 MsG0380014383.01.T01:intron 30.0%
! AATCATTTGAGTTTGATGAG+AGG + Chr3:53914554-53914573 MsG0380014383.01.T01:CDS 30.0%
! ATGAAGATGAGTTTTCTTGT+CGG + Chr3:53922033-53922052 MsG0380014383.01.T01:CDS 30.0%
! ATTGTGTCACTCATGAAAAA+TGG + Chr3:53921964-53921983 MsG0380014383.01.T01:intron 30.0%
! CAAGTAAGGTAATTTTCTGA+TGG - Chr3:53916630-53916649 None:intergenic 30.0%
! CATTTTTCTTCTCCTTATCT+TGG + Chr3:53915376-53915395 MsG0380014383.01.T01:intron 30.0%
! GGATTAGTGATGATAAATAG+AGG - Chr3:53915874-53915893 None:intergenic 30.0%
! GTCAATTTGAGTATGTTTTC+TGG + Chr3:53917088-53917107 MsG0380014383.01.T01:intron 30.0%
! TACTACGCAAAAAGTACAAA+TGG + Chr3:53921613-53921632 MsG0380014383.01.T01:intron 30.0%
! TCATTTGTTTCGATTTGTAC+AGG - Chr3:53921778-53921797 None:intergenic 30.0%
! TGACTTTTTAGATGTTTGTG+AGG + Chr3:53917668-53917687 MsG0380014383.01.T01:CDS 30.0%
! TTGAAAAAGTCATTAGTCTC+GGG - Chr3:53919062-53919081 None:intergenic 30.0%
! TTTGCAGATAGCAAATCTTT+TGG + Chr3:53916461-53916480 MsG0380014383.01.T01:intron 30.0%
! TTTTAGATGTTTGTGAGGAT+TGG + Chr3:53917673-53917692 MsG0380014383.01.T01:CDS 30.0%
! TTTTCTCCAACTCATGAAAA+AGG - Chr3:53920370-53920389 None:intergenic 30.0%
! TTTTGAACAATTCCAGTACA+AGG + Chr3:53920466-53920485 MsG0380014383.01.T01:intron 30.0%
!! AAGGTATTTAGTCTTACTGA+TGG - Chr3:53921496-53921515 None:intergenic 30.0%
!! ATGCAATTTATGATGGACAT+AGG + Chr3:53915645-53915664 MsG0380014383.01.T01:intron 30.0%
!! CCTTTGTTATTGCTTAAACA+TGG + Chr3:53921709-53921728 MsG0380014383.01.T01:intron 30.0%
!! GTTAAAGGTATTAAGGTTCT+AGG - Chr3:53920315-53920334 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG + Chr3:53914892-53914911 MsG0380014383.01.T01:intron 30.0%
!! TCAAAGATGATTTGATTTGG+AGG - Chr3:53919182-53919201 None:intergenic 30.0%
!! TGCAATTTATGATGGACATA+GGG + Chr3:53915646-53915665 MsG0380014383.01.T01:intron 30.0%
!! TTGATTTGTCGTAAAACCTA+CGG + Chr3:53917265-53917284 MsG0380014383.01.T01:CDS 30.0%
!!! AAGAGTGGTGATTTTTTGTA+GGG - Chr3:53918090-53918109 None:intergenic 30.0%
!!! AATAGCAGTCAAGTTGATTT+TGG - Chr3:53917416-53917435 None:intergenic 30.0%
!!! AATCTGTTTTGAAGATGACT+GGG - Chr3:53914415-53914434 None:intergenic 30.0%
!!! CGGTGAATATCTTTTTTTGT+TGG + Chr3:53915320-53915339 MsG0380014383.01.T01:intron 30.0%
!!! TAAGAGTGGTGATTTTTTGT+AGG - Chr3:53918091-53918110 None:intergenic 30.0%
!!! TAATCTGTTTTGAAGATGAC+TGG - Chr3:53914416-53914435 None:intergenic 30.0%
AAACACCATATTGAACACAG+TGG + Chr3:53919233-53919252 MsG0380014383.01.T01:intron 35.0%
AAACTATCTCGTATCCAATG+TGG - Chr3:53914626-53914645 None:intergenic 35.0%
AAACTGTTAAACAATGGCAG+TGG - Chr3:53916661-53916680 None:intergenic 35.0%
AAATAATTGGGTCGGTTGAA+TGG - Chr3:53917063-53917082 None:intergenic 35.0%
AAATGCAGTAGAAATCAGCA+AGG - Chr3:53917770-53917789 None:intergenic 35.0%
AACTATCTCGTATCCAATGT+GGG - Chr3:53914625-53914644 None:intergenic 35.0%
AATCACAATTGAGGTCTCTT+TGG + Chr3:53915063-53915082 MsG0380014383.01.T01:intron 35.0%
AATCCATTCCATGACAAAGT+TGG - Chr3:53915241-53915260 None:intergenic 35.0%
AATGCCAACAAGACTACATA+AGG + Chr3:53921255-53921274 MsG0380014383.01.T01:intron 35.0%
ACGAATCATAGTTCATCAAC+AGG - Chr3:53917632-53917651 None:intergenic 35.0%
ACTAATAAGCATGAAGCAAG+AGG + Chr3:53920924-53920943 MsG0380014383.01.T01:intron 35.0%
ACTGAGCAAGCATAAATGAT+AGG + Chr3:53921810-53921829 MsG0380014383.01.T01:intron 35.0%
ACTTGAATTGTACCTTGTAC+TGG - Chr3:53920481-53920500 None:intergenic 35.0%
AGTTGAGTCATTGGGTTAAT+CGG - Chr3:53916967-53916986 None:intergenic 35.0%
ATCATAGTTCATCAACAGGA+AGG - Chr3:53917628-53917647 None:intergenic 35.0%
CAAGCTTTCTAGACAAAGAA+TGG - Chr3:53915484-53915503 None:intergenic 35.0%
CACATCATACTTTCAACTAC+TGG + Chr3:53920035-53920054 MsG0380014383.01.T01:CDS 35.0%
CAGCTGCATAAAAGCAATTT+AGG - Chr3:53920195-53920214 None:intergenic 35.0%
CATATGTCTCATTGAAGAAG+GGG - Chr3:53922203-53922222 None:intergenic 35.0%
CATATTGTCTTCTTCAGCTT+CGG - Chr3:53918913-53918932 None:intergenic 35.0%
CATGTCAAAAGTCAACCATA+AGG - Chr3:53917966-53917985 None:intergenic 35.0%
CCATTTGCTTCCACTATTAA+AGG + Chr3:53918789-53918808 MsG0380014383.01.T01:CDS 35.0%
CTAATAAGCATGAAGCAAGA+GGG + Chr3:53920925-53920944 MsG0380014383.01.T01:intron 35.0%
CTATGCAAGGTCTTAAATAG+TGG - Chr3:53915137-53915156 None:intergenic 35.0%
CTCATAAACCAATTAGGAAG+AGG + Chr3:53916199-53916218 MsG0380014383.01.T01:intron 35.0%
GATTTCTACTGCATTTCTTC+CGG + Chr3:53917774-53917793 MsG0380014383.01.T01:CDS 35.0%
GGAAGAGGAATTGTTTATCT+AGG + Chr3:53916214-53916233 MsG0380014383.01.T01:intron 35.0%
GGAAGTAACCAATATGATAG+AGG + Chr3:53918810-53918829 MsG0380014383.01.T01:CDS 35.0%
GTAATTTACACCAAGCCTTA+TGG + Chr3:53917948-53917967 MsG0380014383.01.T01:intron 35.0%
GTCATGTGTACTTTGCAATT+TGG - Chr3:53917823-53917842 None:intergenic 35.0%
GTTTGAGTCCAATGATTCTA+AGG - Chr3:53915921-53915940 None:intergenic 35.0%
TAAGTCACTAGTTAGTGCAT+TGG + Chr3:53919127-53919146 MsG0380014383.01.T01:CDS 35.0%
TAATAGCAACTCAGAAGCTT+TGG + Chr3:53917740-53917759 MsG0380014383.01.T01:CDS 35.0%
TACATAATAAGCACTTGTGG+TGG - Chr3:53914802-53914821 None:intergenic 35.0%
TATGTTGAGCATGCAAGTTA+TGG + Chr3:53919889-53919908 MsG0380014383.01.T01:intron 35.0%
TCATAGTTCATCAACAGGAA+GGG - Chr3:53917627-53917646 None:intergenic 35.0%
TCATTTATGCTTGCTCAGTT+TGG - Chr3:53921809-53921828 None:intergenic 35.0%
TGCTAGACAACCATGTTATA+TGG - Chr3:53916032-53916051 None:intergenic 35.0%
TGGCGTTAATTCAACTAGAA+CGG + Chr3:53917580-53917599 MsG0380014383.01.T01:CDS 35.0%
TGGTAAGTATGGATGAAAGT+TGG - Chr3:53916610-53916629 None:intergenic 35.0%
TGTGTTTCTCCGCAATATTA+AGG + Chr3:53915097-53915116 MsG0380014383.01.T01:intron 35.0%
TTAGATGTTTGTGAGGATTG+GGG + Chr3:53917675-53917694 MsG0380014383.01.T01:CDS 35.0%
TTATGTGCAAGCACAAGAAT+TGG + Chr3:53916267-53916286 MsG0380014383.01.T01:intron 35.0%
TTCAAAAAAGCCATTGCTTC+TGG - Chr3:53920888-53920907 None:intergenic 35.0%
TTCATTTGATAAAACTGCCG+TGG + Chr3:53917509-53917528 MsG0380014383.01.T01:CDS 35.0%
TTGTTGTGATGCTATGTGTT+TGG + Chr3:53920413-53920432 MsG0380014383.01.T01:intron 35.0%
TTTCAAGCTCTCAAAGCATA+AGG + Chr3:53914492-53914511 MsG0380014383.01.T01:CDS 35.0%
! AGGCATTAAAGTGCCAAAAA+TGG + Chr3:53919781-53919800 MsG0380014383.01.T01:intron 35.0%
! ATGAGTTTTCTTGTCGGATA+TGG + Chr3:53922039-53922058 MsG0380014383.01.T01:CDS 35.0%
! ATTTCAGGTAGAGTATGTGT+TGG + Chr3:53921999-53922018 MsG0380014383.01.T01:intron 35.0%
! CACTATTTAAGACCTTGCAT+AGG + Chr3:53915135-53915154 MsG0380014383.01.T01:intron 35.0%
! CCCTTGTTTAAATGAGTCTT+AGG - Chr3:53915564-53915583 None:intergenic 35.0%
! CCTTTAATAGTGGAAGCAAA+TGG - Chr3:53918792-53918811 None:intergenic 35.0%
! CTATGGTTTCTGCTGATTAA+TGG - Chr3:53918703-53918722 None:intergenic 35.0%
! CTTCACCATGATCTTTTGTA+TGG - Chr3:53916767-53916786 None:intergenic 35.0%
! TAGTTGAAAGTATGATGTGC+TGG - Chr3:53920034-53920053 None:intergenic 35.0%
! TCATGTCTGCAACTTCTTTT+GGG - Chr3:53918839-53918858 None:intergenic 35.0%
! TGATTTTATAGCTCCTGAAG+AGG - Chr3:53919960-53919979 None:intergenic 35.0%
! TTCATGTCTGCAACTTCTTT+TGG - Chr3:53918840-53918859 None:intergenic 35.0%
! TTTCAGGTAGAGTATGTGTT+GGG + Chr3:53922000-53922019 MsG0380014383.01.T01:intron 35.0%
! TTTTTGCGTAGTATCAGACT+AGG - Chr3:53921606-53921625 None:intergenic 35.0%
!! AAAGGTATTAAGGTTCTAGG+AGG - Chr3:53920312-53920331 None:intergenic 35.0%
!! AAGGTATTAAGGTTCTAGGA+GGG - Chr3:53920311-53920330 None:intergenic 35.0%
!! AATTCAGGTTTTTCTCTGCA+AGG + Chr3:53917451-53917470 MsG0380014383.01.T01:intron 35.0%
!! ACAGAAATTGGTTTGCTTTG+CGG + Chr3:53915300-53915319 MsG0380014383.01.T01:intron 35.0%
!! ACCGTTTTGTTGAAGTACAA+GGG - Chr3:53919481-53919500 None:intergenic 35.0%
!! ATTTGATTTGGAGGAATCCA+TGG - Chr3:53919173-53919192 None:intergenic 35.0%
!! CACACATTTTGTTGTGTCTA+TGG - Chr3:53918720-53918739 None:intergenic 35.0%
!! CTGATTTGGTCTTCACTATT+AGG + Chr3:53921089-53921108 MsG0380014383.01.T01:intron 35.0%
!! GGTGCCTATTTTATTTGATG+TGG - Chr3:53921640-53921659 None:intergenic 35.0%
!! TGAACCTTATGTAGTCTTGT+TGG - Chr3:53921262-53921281 None:intergenic 35.0%
!! TGTTGAGATATGCACTGATT+TGG + Chr3:53921075-53921094 MsG0380014383.01.T01:intron 35.0%
!! TTCATGTTTGTGCTTTTTGG+AGG - Chr3:53921289-53921308 None:intergenic 35.0%
!! TTGGATTGAGTTGAGTCATT+GGG - Chr3:53916975-53916994 None:intergenic 35.0%
!! TTGTCATGGAATGGATTATC+TGG + Chr3:53915244-53915263 MsG0380014383.01.T01:intron 35.0%
!!! CTTCTTTTGACTTATATCGC+CGG - Chr3:53917796-53917815 None:intergenic 35.0%
!!! GGATCTGTTTTGATATAGCT+TGG - Chr3:53921585-53921604 None:intergenic 35.0%
!!! TATTTTAGCTCTCCATTTGC+TGG - Chr3:53920754-53920773 None:intergenic 35.0%
!!! TTTTAGAGTTCCAGAAGCAA+TGG + Chr3:53920875-53920894 MsG0380014383.01.T01:intron 35.0%
AACCACATCCGGATTTAATC+GGG - Chr3:53917015-53917034 None:intergenic 40.0%
ACCTCAACCAAATCCTAATG+TGG + Chr3:53922155-53922174 MsG0380014383.01.T01:CDS 40.0%
AGCACAAGAATTGGCTAAAG+AGG + Chr3:53916276-53916295 MsG0380014383.01.T01:intron 40.0%
AGTACCACCCTTAGAATCAT+TGG + Chr3:53915910-53915929 MsG0380014383.01.T01:intron 40.0%
AGTCAAATATCGGCAATCAC+AGG - Chr3:53915785-53915804 None:intergenic 40.0%
AGTTAGATGCAGTCATGCAA+AGG - Chr3:53916091-53916110 None:intergenic 40.0%
ATAGCTCCAAATGCCACATT+AGG - Chr3:53922171-53922190 None:intergenic 40.0%
ATCCTGTTAGTAGTGTACAC+GGG - Chr3:53917354-53917373 None:intergenic 40.0%
ATCGGGTTCAGGTAAAGTAT+AGG - Chr3:53916998-53917017 None:intergenic 40.0%
ATGAGCTTCCAACTTTGTCA+TGG + Chr3:53915230-53915249 MsG0380014383.01.T01:intron 40.0%
ATGGCTTCGTTGAAACGAAA+AGG + Chr3:53920570-53920589 MsG0380014383.01.T01:CDS 40.0%
ATTAAATCCGGATGTGGTTC+AGG + Chr3:53917016-53917035 MsG0380014383.01.T01:intron 40.0%
ATTGTTCTTGTGCTGTGTTG+TGG - Chr3:53914464-53914483 None:intergenic 40.0%
CAAAAGTCAACCATAAGGCT+TGG - Chr3:53917961-53917980 None:intergenic 40.0%
CAGCACAAGAACAATAGCTT+TGG + Chr3:53914469-53914488 MsG0380014383.01.T01:CDS 40.0%
CATCCTGTTAGTAGTGTACA+CGG - Chr3:53917355-53917374 None:intergenic 40.0%
CCAAATCCTAATGTGGCATT+TGG + Chr3:53922162-53922181 MsG0380014383.01.T01:CDS 40.0%
CCAAATGCCACATTAGGATT+TGG - Chr3:53922165-53922184 None:intergenic 40.0%
CCATATGCACCAAAACATCA+TGG - Chr3:53920554-53920573 None:intergenic 40.0%
CGGCGATATAAGTCAAAAGA+AGG + Chr3:53917794-53917813 MsG0380014383.01.T01:CDS 40.0%
CTTCCAACTTTGTCATGGAA+TGG + Chr3:53915235-53915254 MsG0380014383.01.T01:intron 40.0%
CTTCTGTTCGGATAACTGTT+CGG + Chr3:53914751-53914770 MsG0380014383.01.T01:intron 40.0%
CTTGTTAAAGAGTCCCACAT+TGG + Chr3:53914609-53914628 MsG0380014383.01.T01:intron 40.0%
GAAACGATACCTGGATCTAT+TGG - Chr3:53920062-53920081 None:intergenic 40.0%
GAACCACATCCGGATTTAAT+CGG - Chr3:53917016-53917035 None:intergenic 40.0%
GCCCTTGTACTTCAACAAAA+CGG + Chr3:53919477-53919496 MsG0380014383.01.T01:intron 40.0%
GGGTCAGATAAGGTCAAATT+TGG - Chr3:53917334-53917353 None:intergenic 40.0%
GGTTCAGGTAAAGTATAGGT+TGG - Chr3:53916994-53917013 None:intergenic 40.0%
GTAGTATTAGAGTTCCACAG+TGG + Chr3:53920722-53920741 MsG0380014383.01.T01:intron 40.0%
GTGACTCGATTGTGTGTTTA+AGG + Chr3:53921051-53921070 MsG0380014383.01.T01:intron 40.0%
GTGCACCATACAAAAGATCA+TGG + Chr3:53916759-53916778 MsG0380014383.01.T01:intron 40.0%
GTGCTTGCACATAATGTGAA+TGG - Chr3:53916261-53916280 None:intergenic 40.0%
GTGCTTTAGTGCATTTGATC+AGG + Chr3:53914688-53914707 MsG0380014383.01.T01:intron 40.0%
GTTGGAGAAAAGAATGCATG+TGG + Chr3:53920379-53920398 MsG0380014383.01.T01:intron 40.0%
TAATGCTAAAACTGGGTGCA+AGG + Chr3:53922110-53922129 MsG0380014383.01.T01:CDS 40.0%
TACCTGAACCCGATTAAATC+CGG + Chr3:53917004-53917023 MsG0380014383.01.T01:intron 40.0%
TACTCAAGGAGAGTTCATCA+AGG + Chr3:53920837-53920856 MsG0380014383.01.T01:intron 40.0%
TAGACCTTTGTCACAACACA+GGG + Chr3:53916863-53916882 MsG0380014383.01.T01:intron 40.0%
TATGCAGGATTTAAACGCCT+TGG + Chr3:53920528-53920547 MsG0380014383.01.T01:intron 40.0%
TCACCAGCAAGAAAACATAC+TGG - Chr3:53916325-53916344 None:intergenic 40.0%
TCGTTGAAACGAAAAGGTCT+GGG + Chr3:53920576-53920595 MsG0380014383.01.T01:CDS 40.0%
TGAAAAAGGGTCCGAAATAG+AGG - Chr3:53920356-53920375 None:intergenic 40.0%
TGTACACCCTTGGATCTTAT+TGG - Chr3:53916929-53916948 None:intergenic 40.0%
TGTCGTAAAACCTACGGATT+GGG + Chr3:53917271-53917290 MsG0380014383.01.T01:CDS 40.0%
TTAGACCTTTGTCACAACAC+AGG + Chr3:53916862-53916881 MsG0380014383.01.T01:intron 40.0%
TTCAAGATAGGAAGAGAAGC+CGG + Chr3:53916570-53916589 MsG0380014383.01.T01:intron 40.0%
TTCGTTGAAACGAAAAGGTC+TGG + Chr3:53920575-53920594 MsG0380014383.01.T01:CDS 40.0%
TTGCACATAATGTGAATGGC+TGG - Chr3:53916257-53916276 None:intergenic 40.0%
TTGGGACACCTCTATCATAT+TGG - Chr3:53918821-53918840 None:intergenic 40.0%
TTGTCGTAAAACCTACGGAT+TGG + Chr3:53917270-53917289 MsG0380014383.01.T01:CDS 40.0%
! AATGCACTTTTCTCCTCTTC+AGG + Chr3:53919944-53919963 MsG0380014383.01.T01:intron 40.0%
! ATCTTTTGGACAGCACTACA+TGG + Chr3:53916475-53916494 MsG0380014383.01.T01:CDS 40.0%
! ATTATTCCCTTGATGGCCTT+TGG - Chr3:53918144-53918163 None:intergenic 40.0%
! CTAATGGATGCTGTTACTCA+AGG + Chr3:53916516-53916535 MsG0380014383.01.T01:CDS 40.0%
! CTCTAAAAAACAGCAGGTCT+TGG - Chr3:53920863-53920882 None:intergenic 40.0%
! CTGGAACTCTAAAAAACAGC+AGG - Chr3:53920869-53920888 None:intergenic 40.0%
! CTTCCAGTATGTTTTCTTGC+TGG + Chr3:53916319-53916338 MsG0380014383.01.T01:intron 40.0%
! GGTCTTTGAAGACTTCCTTA+TGG - Chr3:53921691-53921710 None:intergenic 40.0%
! GTGCTGATACATCTCTAAGA+AGG + Chr3:53915964-53915983 MsG0380014383.01.T01:intron 40.0%
! TGATGGGTGTTACCTCATTT+GGG - Chr3:53914585-53914604 None:intergenic 40.0%
! TTATTCCCTTGATGGCCTTT+GGG - Chr3:53918143-53918162 None:intergenic 40.0%
! TTTTTCTCTGCAAGGAAGCA+CGG + Chr3:53917459-53917478 MsG0380014383.01.T01:CDS 40.0%
!! AATTGCTTTTATGCAGCTGC+TGG + Chr3:53920196-53920215 MsG0380014383.01.T01:CDS 40.0%
!! CACCCAGTTTTAGCATTAAC+TGG - Chr3:53922108-53922127 None:intergenic 40.0%
!! GACCGTTTTGTTGAAGTACA+AGG - Chr3:53919482-53919501 None:intergenic 40.0%
!! GTTGGATTGAGTTGAGTCAT+TGG - Chr3:53916976-53916995 None:intergenic 40.0%
!!! CCATGATGTTTTGGTGCATA+TGG + Chr3:53920551-53920570 MsG0380014383.01.T01:CDS 40.0%
!!! TTTTATGCAGCTGCTGGTTT+GGG + Chr3:53920202-53920221 MsG0380014383.01.T01:intron 40.0%
AACAGAAGTCGCAGACATCA+TGG - Chr3:53914739-53914758 None:intergenic 45.0%
AACCCGATTAAATCCGGATG+TGG + Chr3:53917010-53917029 MsG0380014383.01.T01:intron 45.0%
AAGCAACTGATCGCAAGCAA+AGG - Chr3:53918755-53918774 None:intergenic 45.0%
AAGGAGAGGTTGCATCGTTA+TGG + Chr3:53917709-53917728 MsG0380014383.01.T01:CDS 45.0%
ACTACTGGTCCAATAGATCC+AGG + Chr3:53920050-53920069 MsG0380014383.01.T01:CDS 45.0%
AGAGGTTGCATCGTTATGGA+AGG + Chr3:53917713-53917732 MsG0380014383.01.T01:CDS 45.0%
AGATGAGTTGTTCGAGATGC+TGG + Chr3:53917560-53917579 MsG0380014383.01.T01:CDS 45.0%
AGTACCAATTCCACCTGGAA+GGG - Chr3:53917538-53917557 None:intergenic 45.0%
AGTGCATTGGAGGATACTAG+TGG + Chr3:53919140-53919159 MsG0380014383.01.T01:intron 45.0%
ATCAGTTGCTTCCGTTAGCT+CGG + Chr3:53918764-53918783 MsG0380014383.01.T01:intron 45.0%
ATCCAATCCGAACCAAAGGA+TGG + Chr3:53917295-53917314 MsG0380014383.01.T01:CDS 45.0%
ATCCGGATTTAATCGGGTTC+AGG - Chr3:53917009-53917028 None:intergenic 45.0%
ATGACCCTGTGTTGTGACAA+AGG - Chr3:53916870-53916889 None:intergenic 45.0%
CAAACCTCATACCCATCCTT+TGG - Chr3:53917310-53917329 None:intergenic 45.0%
CAAAGGATGGGTATGAGGTT+TGG + Chr3:53917308-53917327 MsG0380014383.01.T01:CDS 45.0%
CACCATATTGAACACAGTGG+CGG + Chr3:53919236-53919255 MsG0380014383.01.T01:intron 45.0%
CACTCTTAGGCATCTTTGGA+TGG + Chr3:53918103-53918122 MsG0380014383.01.T01:intron 45.0%
CAGAGATCAATCCCACTAGA+AGG - Chr3:53915518-53915537 None:intergenic 45.0%
CAGTGGATCACCTTCAAGTA+AGG - Chr3:53916644-53916663 None:intergenic 45.0%
CATCCAAAGATGCCTAAGAG+TGG - Chr3:53918105-53918124 None:intergenic 45.0%
CATTTGTATGGTGCGCACAT+TGG - Chr3:53921661-53921680 None:intergenic 45.0%
CCTATCTTGAATCCACCAAC+CGG - Chr3:53916561-53916580 None:intergenic 45.0%
CGTGTACACTACTAACAGGA+TGG + Chr3:53917353-53917372 MsG0380014383.01.T01:CDS 45.0%
CTCATACCCATCCTTTGGTT+CGG - Chr3:53917305-53917324 None:intergenic 45.0%
CTCGCTCCAATAAGATCCAA+GGG + Chr3:53916920-53916939 MsG0380014383.01.T01:intron 45.0%
CTGAACCATTTGATGTCGGA+CGG + Chr3:53919990-53920009 MsG0380014383.01.T01:CDS 45.0%
CTTCAACAAAACGGTCTTCG+CGG + Chr3:53919486-53919505 MsG0380014383.01.T01:intron 45.0%
GAAGAAGACAATATGCGCGA+CGG + Chr3:53918918-53918937 MsG0380014383.01.T01:CDS 45.0%
GATTGGGGAACTGTCTCTAA+AGG + Chr3:53917690-53917709 MsG0380014383.01.T01:CDS 45.0%
GCACCTGAACCATTTGATGT+CGG + Chr3:53919986-53920005 MsG0380014383.01.T01:CDS 45.0%
GGGTTTGATGAGCACAACAT+CGG - Chr3:53914395-53914414 None:intergenic 45.0%
GTAACAGCATCCATTAGTCC+TGG - Chr3:53916513-53916532 None:intergenic 45.0%
GTCACTAGTTAGTGCATTGG+AGG + Chr3:53919130-53919149 MsG0380014383.01.T01:CDS 45.0%
TAGTGTACACGGGTCAGATA+AGG - Chr3:53917344-53917363 None:intergenic 45.0%
TATGCAGGGACTGAATATGC+AGG + Chr3:53920513-53920532 MsG0380014383.01.T01:intron 45.0%
TCAAGATAGGAAGAGAAGCC+GGG + Chr3:53916571-53916590 MsG0380014383.01.T01:intron 45.0%
TCACCACTCTTAGGCATCTT+TGG + Chr3:53918099-53918118 MsG0380014383.01.T01:intron 45.0%
TCCAATCCGAACCAAAGGAT+GGG + Chr3:53917296-53917315 MsG0380014383.01.T01:CDS 45.0%
TCTAGCAAAACACTTTGCGC+CGG + Chr3:53916045-53916064 MsG0380014383.01.T01:intron 45.0%
TCTCGCTCCAATAAGATCCA+AGG + Chr3:53916919-53916938 MsG0380014383.01.T01:intron 45.0%
TGAACCATTTGATGTCGGAC+GGG + Chr3:53919991-53920010 MsG0380014383.01.T01:CDS 45.0%
TGAGAGGAAAAGCCCAAATG+AGG + Chr3:53914570-53914589 MsG0380014383.01.T01:CDS 45.0%
TGATGTCTGCGACTTCTGTT+CGG + Chr3:53914739-53914758 MsG0380014383.01.T01:intron 45.0%
TGGCTCAATGAAACGATACC+TGG - Chr3:53920071-53920090 None:intergenic 45.0%
TTCATCAACAGGAAGGGAAC+AGG - Chr3:53917621-53917640 None:intergenic 45.0%
TTTGATGAGCACAACATCGG+AGG - Chr3:53914392-53914411 None:intergenic 45.0%
! AAACTAACCTGGTGACGAAC+AGG - Chr3:53917241-53917260 None:intergenic 45.0%
! AAAGTGTCAATACGCTCGTG+CGG - Chr3:53918011-53918030 None:intergenic 45.0%
! CGTGTGAAGTGCTATCTGAT+TGG + Chr3:53920638-53920657 MsG0380014383.01.T01:intron 45.0%
! CTTTTTGTCACTAGGCGCAT+TGG - Chr3:53915189-53915208 None:intergenic 45.0%
! GAGTCCAATGATTCTAAGGG+TGG - Chr3:53915917-53915936 None:intergenic 45.0%
! GCATTTGGAGCTATAGTAGG+TGG + Chr3:53922177-53922196 MsG0380014383.01.T01:CDS 45.0%
! GCCACATTAGGATTTGGTTG+AGG - Chr3:53922159-53922178 None:intergenic 45.0%
! GTGGCATTTGGAGCTATAGT+AGG + Chr3:53922174-53922193 MsG0380014383.01.T01:CDS 45.0%
! TCCAAGGGTGTACACAGAAT+CGG + Chr3:53916935-53916954 MsG0380014383.01.T01:intron 45.0%
! TCTAGAGTACCAATTCCACC+TGG - Chr3:53917543-53917562 None:intergenic 45.0%
! TGGTTTGGGAACCTATGTAG+AGG + Chr3:53920216-53920235 MsG0380014383.01.T01:intron 45.0%
! TGTTCGTCACCAGGTTAGTT+TGG + Chr3:53917240-53917259 MsG0380014383.01.T01:CDS 45.0%
!! CAGTGGACTAAACCAGCAAA+TGG + Chr3:53920739-53920758 MsG0380014383.01.T01:intron 45.0%
!! CTTTTATGCAGCTGCTGGTT+TGG + Chr3:53920201-53920220 MsG0380014383.01.T01:intron 45.0%
!! GTGATGGGTGTTACCTCATT+TGG - Chr3:53914586-53914605 None:intergenic 45.0%
!! TCGGACCCTTTTTCATGAGT+TGG + Chr3:53920361-53920380 MsG0380014383.01.T01:intron 45.0%
!! TTTGCTGGTTTAGTCCACTG+TGG - Chr3:53920739-53920758 None:intergenic 45.0%
!! TTTTCTCTGCAAGGAAGCAC+GGG + Chr3:53917460-53917479 MsG0380014383.01.T01:CDS 45.0%
!!! CCAGGATTTTTCTAGAGCCT+GGG + Chr3:53919261-53919280 MsG0380014383.01.T01:intron 45.0%
!!! TTTTTAATGTTATTTATTTA+TGG + Chr3:53915158-53915177 MsG0380014383.01.T01:intron 5.0%
AAACAATGCGTCTCCAGGTG+TGG + Chr3:53915937-53915956 MsG0380014383.01.T01:intron 50.0%
AAGTGTCAATACGCTCGTGC+GGG - Chr3:53918010-53918029 None:intergenic 50.0%
AGCAAATGGTCCCGAGCTAA+CGG - Chr3:53918778-53918797 None:intergenic 50.0%
AGCATGAAGCAAGAGGGTGA+TGG + Chr3:53920931-53920950 MsG0380014383.01.T01:intron 50.0%
AGGTTGTTCACGCGTTAGCA+GGG + Chr3:53918288-53918307 MsG0380014383.01.T01:intron 50.0%
ATTGTTTGCAGCTGCTGCAC+TGG - Chr3:53920683-53920702 None:intergenic 50.0%
CAAGATAGGAAGAGAAGCCG+GGG + Chr3:53916572-53916591 MsG0380014383.01.T01:intron 50.0%
CGAACCAAAGGATGGGTATG+AGG + Chr3:53917303-53917322 MsG0380014383.01.T01:CDS 50.0%
CGTCCGACATCAAATGGTTC+AGG - Chr3:53919992-53920011 None:intergenic 50.0%
CTCCGCCACTGTGTTCAATA+TGG - Chr3:53919241-53919260 None:intergenic 50.0%
GACCCGTGTACACTACTAAC+AGG + Chr3:53917349-53917368 MsG0380014383.01.T01:CDS 50.0%
GACTCAAACAATGCGTCTCC+AGG + Chr3:53915932-53915951 MsG0380014383.01.T01:intron 50.0%
GAGTACCAATTCCACCTGGA+AGG - Chr3:53917539-53917558 None:intergenic 50.0%
GCACCAAAACATCATGGCCA+AGG - Chr3:53920548-53920567 None:intergenic 50.0%
GCATGAAGCAAGAGGGTGAT+GGG + Chr3:53920932-53920951 MsG0380014383.01.T01:intron 50.0%
GCTAAAACTGGGTGCAAGGA+TGG + Chr3:53922114-53922133 MsG0380014383.01.T01:CDS 50.0%
GGAAGTAAAGCTGCACATCC+AGG - Chr3:53919041-53919060 None:intergenic 50.0%
GGATTGGATACCCAATCCGT+AGG - Chr3:53917284-53917303 None:intergenic 50.0%
GGGTATCCAATCCGAACCAA+AGG + Chr3:53917291-53917310 MsG0380014383.01.T01:CDS 50.0%
TCAACCCGTCCGACATCAAA+TGG - Chr3:53919998-53920017 None:intergenic 50.0%
TCAGTTGCTTCCGTTAGCTC+GGG + Chr3:53918765-53918784 MsG0380014383.01.T01:intron 50.0%
TCATCCCTCCGTCTCACAAA+CGG - Chr3:53920791-53920810 None:intergenic 50.0%
TCGGGATACAAATTTCGCCC+AGG - Chr3:53919281-53919300 None:intergenic 50.0%
TCTCGCAAGTGCCTCTACAT+AGG - Chr3:53920230-53920249 None:intergenic 50.0%
TGACATGGCCGTTTGTGAGA+CGG + Chr3:53920780-53920799 MsG0380014383.01.T01:intron 50.0%
TGGACAGCACTACATGGTCA+GGG + Chr3:53916481-53916500 MsG0380014383.01.T01:CDS 50.0%
TGTGAGACGGAGGGATGATT+TGG + Chr3:53920793-53920812 MsG0380014383.01.T01:intron 50.0%
TTGGACAGCACTACATGGTC+AGG + Chr3:53916480-53916499 MsG0380014383.01.T01:CDS 50.0%
! ACGAACAGGTTGAGTCAGGT+TGG - Chr3:53917227-53917246 None:intergenic 50.0%
! ACGCCTTGGCCATGATGTTT+TGG + Chr3:53920542-53920561 MsG0380014383.01.T01:CDS 50.0%
! AGGTTGGGCTGACTAGTCAA+AGG - Chr3:53917211-53917230 None:intergenic 50.0%
! CCAAGGGTGTACACAGAATC+GGG + Chr3:53916936-53916955 MsG0380014383.01.T01:intron 50.0%
! CGAACAGGTTGAGTCAGGTT+GGG - Chr3:53917226-53917245 None:intergenic 50.0%
! GATGACTTGTAGCAGCCCAA+AGG + Chr3:53918125-53918144 MsG0380014383.01.T01:intron 50.0%
! GGGAACTGTCTCTAAAGGAG+AGG + Chr3:53917695-53917714 MsG0380014383.01.T01:CDS 50.0%
! GGTGCAAGGATGGATTCAAG+TGG + Chr3:53922124-53922143 MsG0380014383.01.T01:CDS 50.0%
! GGTTGGGCTGACTAGTCAAA+GGG - Chr3:53917210-53917229 None:intergenic 50.0%
! TGTTACTCAAGGTGCTCTGC+TGG + Chr3:53916527-53916546 MsG0380014383.01.T01:CDS 50.0%
!! ACCCATCCTTTGGTTCGGAT+TGG - Chr3:53917300-53917319 None:intergenic 50.0%
!! CCCAGGCTCTAGAAAAATCC+TGG - Chr3:53919264-53919283 None:intergenic 50.0%
!! CCGGTTGGTGGATTCAAGAT+AGG + Chr3:53916558-53916577 MsG0380014383.01.T01:intron 50.0%
!!! GCCAGGATTTTTCTAGAGCC+TGG + Chr3:53919260-53919279 MsG0380014383.01.T01:intron 50.0%
AGCAGCCCAAAGGCCATCAA+GGG + Chr3:53918135-53918154 MsG0380014383.01.T01:intron 55.0%
ATGGCCGTTTGTGAGACGGA+GGG + Chr3:53920784-53920803 MsG0380014383.01.T01:intron 55.0%
CCCGATTCTGTGTACACCCT+TGG - Chr3:53916939-53916958 None:intergenic 55.0%
GACTCAACCTGTTCGTCACC+AGG + Chr3:53917231-53917250 MsG0380014383.01.T01:CDS 55.0%
GAGGTTGTTCACGCGTTAGC+AGG + Chr3:53918287-53918306 MsG0380014383.01.T01:intron 55.0%
GCTGCACATCCAGGATCATG+AGG - Chr3:53919032-53919051 None:intergenic 55.0%
GGACAACAGCCTCATGATCC+TGG + Chr3:53919020-53919039 MsG0380014383.01.T01:CDS 55.0%
GGACAGCACTACATGGTCAG+GGG + Chr3:53916482-53916501 MsG0380014383.01.T01:CDS 55.0%
GGTTGTTCACGCGTTAGCAG+GGG + Chr3:53918289-53918308 MsG0380014383.01.T01:intron 55.0%
GTTGCCCTTCCAGGTGGAAT+TGG + Chr3:53917531-53917550 MsG0380014383.01.T01:CDS 55.0%
GTTGGATGCTGTCCATTCCC+CGG - Chr3:53916592-53916611 None:intergenic 55.0%
TAGCAGCCCAAAGGCCATCA+AGG + Chr3:53918134-53918153 MsG0380014383.01.T01:intron 55.0%
TAGGAAGAGAAGCCGGGGAA+TGG + Chr3:53916577-53916596 MsG0380014383.01.T01:intron 55.0%
TATCAGCACTGCACCACACC+TGG - Chr3:53915953-53915972 None:intergenic 55.0%
TCCGGATGTGGTTCAGGTGA+CGG + Chr3:53917022-53917041 MsG0380014383.01.T01:intron 55.0%
TCCGTCACCTGAACCACATC+CGG - Chr3:53917026-53917045 None:intergenic 55.0%
! GGCTAGTCGATGCTGTAGTG+AGG + Chr3:53917481-53917500 MsG0380014383.01.T01:CDS 55.0%
! GGTGACGAACAGGTTGAGTC+AGG - Chr3:53917231-53917250 None:intergenic 55.0%
AGCACTACATGGTCAGGGGC+TGG + Chr3:53916486-53916505 MsG0380014383.01.T01:CDS 60.0%
AGGGGCTGGACCAGGACTAA+TGG + Chr3:53916500-53916519 MsG0380014383.01.T01:CDS 60.0%
CATGGCCGTTTGTGAGACGG+AGG + Chr3:53920783-53920802 MsG0380014383.01.T01:intron 60.0%
TCCACCTGGAAGGGCAACCA+CGG - Chr3:53917529-53917548 None:intergenic 60.0%
TGCTCTGCTGGCAGGGAAAC+CGG + Chr3:53916539-53916558 MsG0380014383.01.T01:CDS 60.0%
! ACTCAAGGTGCTCTGCTGGC+AGG + Chr3:53916531-53916550 MsG0380014383.01.T01:CDS 60.0%
! CTCAAGGTGCTCTGCTGGCA+GGG + Chr3:53916532-53916551 MsG0380014383.01.T01:CDS 60.0%
! TTGAACACAGTGGCGGAGCC+AGG + Chr3:53919243-53919262 MsG0380014383.01.T01:intron 60.0%
ACATGGTCAGGGGCTGGACC+AGG + Chr3:53916492-53916511 MsG0380014383.01.T01:CDS 65.0%
ACTGCCGTGGTTGCCCTTCC+AGG + Chr3:53917522-53917541 MsG0380014383.01.T01:CDS 65.0%
CTGCTGGCAGGGAAACCGGT+TGG + Chr3:53916543-53916562 MsG0380014383.01.T01:intron 65.0%
CTGGCAGGGAAACCGGTTGG+TGG + Chr3:53916546-53916565 MsG0380014383.01.T01:intron 65.0%
GCCGTGGTTGCCCTTCCAGG+TGG + Chr3:53917525-53917544 MsG0380014383.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 53914370 53922260 53914370 ID=MsG0380014383.01;Name=MsG0380014383.01
Chr3 mRNA 53914370 53922260 53914370 ID=MsG0380014383.01.T01;Parent=MsG0380014383.01;Name=MsG0380014383.01.T01;_AED=0.45;_eAED=0.61;_QI=0|0|0|1|1|1|8|0|613
Chr3 exon 53914370 53914591 53914370 ID=MsG0380014383.01.T01:exon:9973;Parent=MsG0380014383.01.T01
Chr3 exon 53916468 53916560 53916468 ID=MsG0380014383.01.T01:exon:9974;Parent=MsG0380014383.01.T01
Chr3 exon 53917223 53917374 53917223 ID=MsG0380014383.01.T01:exon:9975;Parent=MsG0380014383.01.T01
Chr3 exon 53917458 53917831 53917458 ID=MsG0380014383.01.T01:exon:9976;Parent=MsG0380014383.01.T01
Chr3 exon 53918769 53919158 53918769 ID=MsG0380014383.01.T01:exon:9977;Parent=MsG0380014383.01.T01
Chr3 exon 53919966 53920217 53919966 ID=MsG0380014383.01.T01:exon:9978;Parent=MsG0380014383.01.T01
Chr3 exon 53920535 53920638 53920535 ID=MsG0380014383.01.T01:exon:9979;Parent=MsG0380014383.01.T01
Chr3 exon 53922006 53922260 53922006 ID=MsG0380014383.01.T01:exon:9980;Parent=MsG0380014383.01.T01
Chr3 CDS 53914370 53914591 53914370 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53916468 53916560 53916468 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53917223 53917374 53917223 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53917458 53917831 53917458 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53918769 53919158 53918769 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53919966 53920217 53919966 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53920535 53920638 53920535 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Chr3 CDS 53922006 53922260 53922006 ID=MsG0380014383.01.T01:cds;Parent=MsG0380014383.01.T01
Gene Sequence

>MsG0380014383.01.T01

ATGGCATTCTCGTTTGGTTCCTCCGATGTTGTGCTCATCAAACCCAGTCATCTTCAAAACAGATTAATCAACTGCAGCAAATTAGTATTCTCCACAACACAGCACAAGAACAATAGCTTTGGTTTCAAGCTCTCAAAGCATAAGGCCAATCACAGATCAATTTTTGTAAGCAAAAGCAAGCAAGAATCATTTGAGTTTGATGAGAGGAAAAGCCCAAATGAGATAGCAAATCTTTTGGACAGCACTACATGGTCAGGGGCTGGACCAGGACTAATGGATGCTGTTACTCAAGGTGCTCTGCTGGCAGGGAAACCGCCCAACCTGACTCAACCTGTTCGTCACCAGGTTAGTTTGGTTTTGATTTGTCGTAAAACCTACGGATTGGGTATCCAATCCGAACCAAAGGATGGGTATGAGGTTTGGCCAAATTTGACCTTATCTGACCCGTGTACACTACTAACAGGATGGTTTTTCTCTGCAAGGAAGCACGGGCTAGTCGATGCTGTAGTGAGGAATAATTCATTTGATAAAACTGCCGTGGTTGCCCTTCCAGGTGGAATTGGTACTCTAGATGAGTTGTTCGAGATGCTGGCGTTAATTCAACTAGAACGGATTGGATCAAAACTTCCTGTTCCCTTCCTGTTGATGAACTATGATTCGTTTTATTCAAAACTACTTGACTTTTTAGATGTTTGTGAGGATTGGGGAACTGTCTCTAAAGGAGAGGTTGCATCGTTATGGAAGGTTTGTAATAGCAACTCAGAAGCTTTGGCTTACCTTGCTGATTTCTACTGCATTTCTTCCGGCGATATAAGTCAAAAGAAGGAAACCAAATTGCAAATTGCTTCCGTTAGCTCGGGACCATTTGCTTCCACTATTAAAGGAAGTAACCAATATGATAGAGGTGTCCCAAAAGAAGTTGCAGACATGAAAAATGAACTAGAAAGCATTGAAGACTTCATCAACAATGCAGATAGAATGACCGAAGCTGAAGAAGACAATATGCGCGACGGAATCAAAGCAAAGATCAGACAGCTGAGAGAAGCATCTTTTCACATACAAGATGTCATTGATGAATATATGATATGTGAGGGACAACAGCCTCATGATCCTGGATGTGCAGCTTTACTTCCCGAGACTAATGACTTTTTCAAAACCAAGATTCTTCGTCTACAAATAGCTTACAAGATTCAGGACATTAAGTCACTAGTTAGTGCATTGGAGGATACTAGAGCTATAAAATCAGTTTACGCACCTGAACCATTTGATGTCGGACGGGTTGACTATTTCAGAAAACCAGCACATCATACTTTCAACTACTGGTCCAATAGATCCAGGTATCGTTTCATTGAGCCATCCACATTTAATTTAGAAGTCACGGACATACATAGATTCTACATATTTGTTTATATTGAAACTATAAAGGTGTTATCTTTACGTTGCACAACCAATTTGAGCCTAAATTGCTTTTATGCAGCTGCTGGATTTAAACGCCTTGGCCATGATGTTTTGGTGCATATGGCTTCGTTGAAACGAAAAGGTCTGGGACAATCAAACGAAGACAGTGATAAATTCAGTTCAGAACACGTAGAGTATGTGTTGGGAGAAAATCCAATGAAGATGAGTTTTCTTGTCGGATATGGAAGTAACTACCCTAAATATATACATCATAGAGGATCTTCAATTCCAGTTAATGCTAAAACTGGGTGCAAGGATGGATTCAAGTGGTATGACTCACCTCAACCAAATCCTAATGTGGCATTTGGAGCTATAGTAGGTGGCCCCTTCTTCAATGAGACATATGATGATTTCAGGAACAACACAGTGCAGCTATTTCTTTAA
Protein sequence

>MsG0380014383.01.T01

MAFSFGSSDVVLIKPSHLQNRLINCSKLVFSTTQHKNNSFGFKLSKHKANHRSIFVSKSKQESFEFDERKSPNEIANLLDSTTWSGAGPGLMDAVTQGALLAGKPPNLTQPVRHQVSLVLICRKTYGLGIQSEPKDGYEVWPNLTLSDPCTLLTGWFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLDVCEDWGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDISQKKETKLQIASVSSGPFASTIKGSNQYDRGVPKEVADMKNELESIEDFINNADRMTEAEEDNMRDGIKAKIRQLREASFHIQDVIDEYMICEGQQPHDPGCAALLPETNDFFKTKILRLQIAYKIQDIKSLVSALEDTRAIKSVYAPEPFDVGRVDYFRKPAHHTFNYWSNRSRYRFIEPSTFNLEVTDIHRFYIFVYIETIKVLSLRCTTNLSLNCFYAAAGFKRLGHDVLVHMASLKRKGLGQSNEDSDKFSSEHVEYVLGENPMKMSFLVGYGSNYPKYIHHRGSSIPVNAKTGCKDGFKWYDSPQPNPNVAFGAIVGGPFFNETYDDFRNNTVQLFL*