AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006031.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006031.01.T01 MTR_1g112280 83.817 482 25 4 14 494 303 732 0.0 823
MsG0180006031.01.T01 MTR_1g112280 83.803 426 25 3 14 438 303 685 0.0 725
MsG0180006031.01.T01 MTR_8g080340 30.882 136 80 3 343 478 1 122 4.73e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006031.01.T01 AT1G75010 41.494 482 202 11 23 494 310 721 8.53e-112 347
MsG0180006031.01.T01 AT1G60890 33.600 125 74 1 368 492 71 186 3.67e-12 69.3
MsG0180006031.01.T01 AT1G60890 33.600 125 74 1 368 492 59 174 3.94e-12 69.3

Find 219 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCATCAGCTTCCCTTTCT+TGG 0.160785 1:-99086118 None:intergenic
TGAATAGGTACACTGAAATT+TGG 0.182648 1:+99088865 MsG0180006031.01.T01:three_prime_UTR
ACGCGAAGTATAATTAATTA+TGG 0.196256 1:-99088547 None:intergenic
AAAATAAAATAGAATAAAAT+TGG 0.219368 1:-99089179 None:intergenic
GAAATATCTATGATGGTTTA+TGG 0.235774 1:+99086969 MsG0180006031.01.T01:CDS
ATGCATATGACTGCACTATT+TGG 0.239687 1:-99084325 None:intergenic
AGGAAAATGCAGGGCAAGTT+TGG 0.247568 1:-99085530 None:intergenic
AGGTTTGACTTTATATTTAC+AGG 0.256121 1:+99086695 MsG0180006031.01.T01:CDS
GACAGAACACCGTGCTTCTT+TGG 0.282395 1:-99086323 None:intergenic
AAATCTGTCATCTATAATAC+TGG 0.287616 1:-99085677 None:intergenic
CGGGAAGGGATCCACCATTT+TGG 0.292065 1:-99087672 None:intergenic
TCCTAATGGCTTTGTATAAT+AGG 0.293854 1:+99089108 MsG0180006031.01.T01:three_prime_UTR
ATCGGTGGTTTGCAAACTTC+TGG 0.294923 1:+99087368 MsG0180006031.01.T01:CDS
AAAATTACCTTCTTCATTAA+CGG 0.298913 1:-99085918 None:intergenic
AACCAGGGGCGTCTTGTTCT+TGG 0.303924 1:+99086941 MsG0180006031.01.T01:intron
AAGTCTGGTGATGCCTTCTT+TGG 0.305312 1:+99087427 MsG0180006031.01.T01:CDS
TAATACACATGTGAACAAAA+AGG 0.318677 1:-99087733 None:intergenic
GTTCTTTATACTAAGAATAA+AGG 0.330118 1:+99086524 MsG0180006031.01.T01:CDS
TTGTTGATTAATTGATGTTT+GGG 0.346701 1:+99088454 MsG0180006031.01.T01:three_prime_UTR
ATCATCAGCTTCCCTTTCTT+GGG 0.346872 1:-99086117 None:intergenic
AGTAGTAAAGATTGATGATA+TGG 0.348590 1:+99088027 MsG0180006031.01.T01:three_prime_UTR
TTCTTGAAATAGAATGTTCC+TGG 0.349806 1:-99087013 None:intergenic
GCAGCTTGGAAACTGGAATC+TGG 0.352297 1:+99086064 MsG0180006031.01.T01:CDS
TGTTGTGGAAATACAATATA+GGG 0.352525 1:+99086752 MsG0180006031.01.T01:CDS
CTAGGGAGCAGCTTGGAAAC+TGG 0.352578 1:+99086057 MsG0180006031.01.T01:CDS
TTTGTTGATTAATTGATGTT+TGG 0.354669 1:+99088453 MsG0180006031.01.T01:three_prime_UTR
TTTGGCCTTCTTCTATCTCT+AGG 0.361074 1:-99088064 None:intergenic
CTTCTTCTATCTCTAGGTAT+TGG 0.361171 1:-99088058 None:intergenic
TTAAACACAAGTTTGTAAAC+AGG 0.361429 1:-99088603 None:intergenic
AAGAGAGGTGTCGAGATAAA+TGG 0.370969 1:+99088112 MsG0180006031.01.T01:three_prime_UTR
CGCGAAGTATAATTAATTAT+GGG 0.374710 1:-99088546 None:intergenic
CTGTTGTGGAAATACAATAT+AGG 0.375868 1:+99086751 MsG0180006031.01.T01:CDS
TTACACAAGAGGCTGTTTCC+AGG 0.378319 1:-99087621 None:intergenic
TCTTCATTAACGGATTCATA+AGG 0.378330 1:-99085908 None:intergenic
AGTCAGCAACAAACTGTCTC+TGG 0.381755 1:+99085580 MsG0180006031.01.T01:CDS
TGGTGGTCAAATTAAAGTTC+AGG 0.384766 1:-99087883 None:intergenic
TAAGAATTTACCTTCCCTTC+AGG 0.388358 1:-99086810 None:intergenic
TGCTATATCACTATCATTGA+TGG 0.389779 1:-99084365 None:intergenic
GAATAGGTACACTGAAATTT+GGG 0.392508 1:+99088866 MsG0180006031.01.T01:three_prime_UTR
TCTTGATGGCAGTCGCTGCC+TGG 0.396151 1:-99088237 None:intergenic
AAGACGACAAATATAAAATT+AGG 0.401296 1:+99088256 MsG0180006031.01.T01:three_prime_UTR
CAAAATGGTGGATCCCTTCC+CGG 0.401626 1:+99087673 MsG0180006031.01.T01:three_prime_UTR
TCGTGTATTCTGTTGTTTGA+CGG 0.402618 1:-99084405 None:intergenic
AAAAGGGCAGATATCAATTC+TGG 0.403553 1:+99088372 MsG0180006031.01.T01:three_prime_UTR
GTTATAGTTGTCTGTAATTG+AGG 0.404301 1:+99088196 MsG0180006031.01.T01:three_prime_UTR
ATGCGGGAGCTTTAGTGCAC+TGG 0.405471 1:+99087705 MsG0180006031.01.T01:three_prime_UTR
CCTTCGCGGAAGTTAAAACT+TGG 0.406583 1:+99088412 MsG0180006031.01.T01:three_prime_UTR
GGTGGCTAATATAAGTTGTT+TGG 0.410747 1:-99087785 None:intergenic
CTTCATTAACGGATTCATAA+GGG 0.412878 1:-99085907 None:intergenic
GCTCAAAGTTGTCTGCTTCA+AGG 0.412995 1:+99085743 MsG0180006031.01.T01:CDS
CTGTGTACTGTCATGTGAAT+AGG 0.414038 1:+99088850 MsG0180006031.01.T01:three_prime_UTR
CGACACCTCTCTTATTGATT+CGG 0.414111 1:-99088102 None:intergenic
GAGATCTTATAACGTTGATA+AGG 0.414385 1:+99085636 MsG0180006031.01.T01:CDS
GGAACATTCTATTTCAAGAA+TGG 0.415848 1:+99087016 MsG0180006031.01.T01:CDS
GAGCCGTTATTGCTTGTGTT+TGG 0.417420 1:-99085724 None:intergenic
AGTAGGTTGGGCTCGACATC+AGG 0.417739 1:-99084457 None:intergenic
ACTTTACAATTGGAGTATAT+AGG 0.420045 1:+99088679 MsG0180006031.01.T01:three_prime_UTR
ACCTCTATCATGGTTTATCA+TGG 0.420334 1:-99088518 None:intergenic
AGATCTTATAACGTTGATAA+GGG 0.421092 1:+99085637 MsG0180006031.01.T01:CDS
CTATATTGTATTTCCACAAC+AGG 0.424847 1:-99086750 None:intergenic
TCGGAAGGCCTCACACCAAC+AGG 0.431900 1:-99086176 None:intergenic
GTATAATAGGTGTTTATTGT+GGG 0.432689 1:+99089121 MsG0180006031.01.T01:three_prime_UTR
TCACGTAGAATATTAACAAA+AGG 0.437223 1:+99088355 MsG0180006031.01.T01:three_prime_UTR
AAGAATGGAGATATGTTTCA+AGG 0.440013 1:+99087031 MsG0180006031.01.T01:CDS
CTGCGTACAATACACCAAAA+TGG 0.441496 1:+99087658 MsG0180006031.01.T01:three_prime_UTR
CCATGTGGCTAACCTTATCC+AGG 0.448273 1:+99088160 MsG0180006031.01.T01:three_prime_UTR
GTCTTTGAAATTGCCAAAGA+AGG 0.449174 1:-99087440 None:intergenic
TGTATAATAGGTGTTTATTG+TGG 0.449285 1:+99089120 MsG0180006031.01.T01:three_prime_UTR
GTTAAAACTTGGATAAAGAT+AGG 0.451566 1:+99088423 MsG0180006031.01.T01:three_prime_UTR
CAAAAGAGTGGGCCCAAGAA+AGG 0.452782 1:+99086105 MsG0180006031.01.T01:CDS
TTCTGGAAGGGAAAGGCAAA+TGG 0.454145 1:+99087385 MsG0180006031.01.T01:CDS
TAAACAGTCTTTCGACTCTT+CGG 0.455530 1:-99086195 None:intergenic
TGGCACAGCGGCAAGAGATC+AGG 0.458775 1:+99086989 MsG0180006031.01.T01:CDS
GACCAGAGTTAAATTTAAAA+CGG 0.459437 1:-99087092 None:intergenic
TTCCCGGACCCTGTGTATGC+GGG 0.459793 1:+99087689 MsG0180006031.01.T01:three_prime_UTR
GCTCCCGCATACACAGGGTC+CGG 0.460133 1:-99087692 None:intergenic
CAGTTTCCAAGCTGCTCCCT+AGG 0.460619 1:-99086056 None:intergenic
ATAAGGGATAGGACAATTAG+AGG 0.460878 1:-99085891 None:intergenic
AACCTCTAGACCGATCCTAA+TGG 0.464637 1:+99089094 MsG0180006031.01.T01:three_prime_UTR
AAGATACTTACCTAAGTGTA+AGG 0.466797 1:-99084492 None:intergenic
GGTCTAGAGGTTAGAGGCTG+AGG 0.467719 1:-99089083 None:intergenic
GGGCGTCTTGTTCTTGGAGA+TGG 0.473196 1:+99086947 MsG0180006031.01.T01:CDS
AGCATATTCCACCTTCCTGT+TGG 0.473885 1:+99086161 MsG0180006031.01.T01:CDS
TTTAATTTGACCACCAATCC+AGG 0.474608 1:+99087890 MsG0180006031.01.T01:three_prime_UTR
GGAGATGGAAATATCTATGA+TGG 0.474755 1:+99086962 MsG0180006031.01.T01:CDS
GGTTTATCATGGTTTGAAGT+TGG 0.479589 1:-99088507 None:intergenic
TAACAGAAAGAAGACTTAAA+CGG 0.480992 1:-99087806 None:intergenic
CAGGAAGGTGGAATATGCTT+AGG 0.487208 1:-99086157 None:intergenic
ACCTATTATACAAAGCCATT+AGG 0.489564 1:-99089109 None:intergenic
AGGATCGGTCTAGAGGTTAG+AGG 0.490600 1:-99089089 None:intergenic
ACCAGATGGCTTTGACAAGT+TGG 0.491750 1:-99088320 None:intergenic
TATGAATCCGTTAATGAAGA+AGG 0.494377 1:+99085911 MsG0180006031.01.T01:CDS
GACAGTCGTGATCAGTAGGT+TGG 0.494454 1:-99084470 None:intergenic
TTCTTTGGCAATTTCAAAGA+CGG 0.496112 1:+99087442 MsG0180006031.01.T01:CDS
ACCAACTTGTCAAAGCCATC+TGG 0.496475 1:+99088319 MsG0180006031.01.T01:three_prime_UTR
CAGCTTGGAAACTGGAATCT+GGG 0.497400 1:+99086065 MsG0180006031.01.T01:CDS
TTTAGTTTGATTGCCTGTCA+TGG 0.498863 1:+99088817 MsG0180006031.01.T01:three_prime_UTR
ACAAACTGTCTCTGGGAAAG+AGG 0.503277 1:+99085588 MsG0180006031.01.T01:CDS
TGACAGGCAATCAAACTAAA+CGG 0.503799 1:-99088814 None:intergenic
TCACACTAAAATTAATGTCC+TGG 0.507138 1:-99087908 None:intergenic
GGAAACTGGAATCTGGGCCC+TGG 0.507776 1:+99086071 MsG0180006031.01.T01:CDS
TGACAAACACTGCGCAGAGT+TGG 0.508108 1:+99085699 MsG0180006031.01.T01:CDS
GCCAAGGTGGTCTGCCTGAA+GGG 0.513027 1:+99086796 MsG0180006031.01.T01:CDS
CACGTAGAATATTAACAAAA+GGG 0.513177 1:+99088356 MsG0180006031.01.T01:three_prime_UTR
ATGGGATCGAACCTCTATCA+TGG 0.513266 1:-99088528 None:intergenic
GGCAGGTGTGGAAGCAGTGA+TGG 0.515489 1:+99086253 MsG0180006031.01.T01:CDS
ATGCTTAGGTTATCCACCAT+TGG 0.516196 1:-99086143 None:intergenic
AAATTAATGTCCTGGATTGG+TGG 0.516319 1:-99087900 None:intergenic
TGAGGGGAGCCTTGATGCAA+TGG 0.517700 1:+99087557 MsG0180006031.01.T01:three_prime_UTR
TATCATGGTTTGAAGTTGGT+AGG 0.519750 1:-99088503 None:intergenic
ACAGTCGTGATCAGTAGGTT+GGG 0.522663 1:-99084469 None:intergenic
GAGCCAAACACAAGCAATAA+CGG 0.525587 1:+99085721 MsG0180006031.01.T01:CDS
CTTCCCGGACCCTGTGTATG+CGG 0.528877 1:+99087688 MsG0180006031.01.T01:three_prime_UTR
GCATGAGCCGGAGGCAGGTG+TGG 0.529807 1:+99086241 MsG0180006031.01.T01:CDS
CTAAAATTAATGTCCTGGAT+TGG 0.529913 1:-99087903 None:intergenic
AAGGGAAAGGCAAATGGAGA+GGG 0.532264 1:+99087391 MsG0180006031.01.T01:CDS
ACTGCTTCCACACCTGCCTC+CGG 0.534605 1:-99086248 None:intergenic
AAAAGAGTGGGCCCAAGAAA+GGG 0.535989 1:+99086106 MsG0180006031.01.T01:CDS
AGGGAAAGGCAAATGGAGAG+GGG 0.536953 1:+99087392 MsG0180006031.01.T01:CDS
TGGATAGTATACCACCACTC+TGG 0.537473 1:-99085510 None:intergenic
TGTTCGTGCAGCATCTATGC+TGG 0.537748 1:+99086346 MsG0180006031.01.T01:CDS
CTCCCGCATACACAGGGTCC+GGG 0.538585 1:-99087691 None:intergenic
GTTTAGACAGATGACTAAGC+TGG 0.543408 1:+99088916 MsG0180006031.01.T01:three_prime_UTR
GCATACACAGGGTCCGGGAA+GGG 0.543630 1:-99087686 None:intergenic
ACCATGATAAACCATGATAG+AGG 0.543630 1:+99088517 MsG0180006031.01.T01:three_prime_UTR
TTAACGGATTCATAAGGGAT+AGG 0.544925 1:-99085902 None:intergenic
TCCACCTTCCTGTTGGTGTG+AGG 0.546047 1:+99086168 MsG0180006031.01.T01:CDS
GGTAGTATACATAACGTCCT+AGG 0.546472 1:-99089062 None:intergenic
GTCAGCAACAAACTGTCTCT+GGG 0.548258 1:+99085581 MsG0180006031.01.T01:CDS
TGCCAAGGTGGTCTGCCTGA+AGG 0.548874 1:+99086795 MsG0180006031.01.T01:CDS
AAGGTCACGGGATCAAGTCC+TGG 0.551377 1:+99087603 MsG0180006031.01.T01:three_prime_UTR
TGCGGGAGCTTTAGTGCACT+GGG 0.553218 1:+99087706 MsG0180006031.01.T01:three_prime_UTR
CTTTGTATGTTGTATAATAG+CGG 0.556147 1:+99089004 MsG0180006031.01.T01:three_prime_UTR
GGATAGTATACCACCACTCT+GGG 0.558036 1:-99085509 None:intergenic
AGGTGGTCTGCCTGAAGGGA+AGG 0.558342 1:+99086800 MsG0180006031.01.T01:CDS
CGCATACACAGGGTCCGGGA+AGG 0.563422 1:-99087687 None:intergenic
TTCAAAGACGGATGGCGGCA+TGG 0.564291 1:+99087454 MsG0180006031.01.T01:CDS
GCTATATCACTATCATTGAT+GGG 0.564613 1:-99084364 None:intergenic
GTTGTTGTCACGTGACTGAA+AGG 0.565385 1:+99087584 MsG0180006031.01.T01:three_prime_UTR
CAGAAAGTCAATTCCATGAC+AGG 0.566617 1:-99088830 None:intergenic
AAATTAAAGTTCAGGACTTG+AGG 0.566778 1:-99087875 None:intergenic
TGGTTTGCAAACTTCTGGAA+GGG 0.569915 1:+99087373 MsG0180006031.01.T01:CDS
ACAACTTTACCATTGCATCA+AGG 0.570136 1:-99087566 None:intergenic
TTGGCAATTTCAAAGACGGA+TGG 0.570378 1:+99087446 MsG0180006031.01.T01:CDS
TACACTGAAATTTGGGATCA+CGG 0.572724 1:+99088873 MsG0180006031.01.T01:three_prime_UTR
ACATGACATTGACATTTGAG+AGG 0.572834 1:+99087830 MsG0180006031.01.T01:three_prime_UTR
AGTAAAGATTGATGATATGG+AGG 0.573525 1:+99088030 MsG0180006031.01.T01:three_prime_UTR
ACTAAAGCTCCCGCATACAC+AGG 0.573751 1:-99087698 None:intergenic
CAGAAAGAAGACTTAAACGG+TGG 0.575221 1:-99087803 None:intergenic
GTCACGTGACTGAAAGGTCA+CGG 0.576961 1:+99087590 MsG0180006031.01.T01:three_prime_UTR
CCTGGATAAGGTTAGCCACA+TGG 0.577900 1:-99088160 None:intergenic
GCAATTTCAAAGACGGATGG+CGG 0.577985 1:+99087449 MsG0180006031.01.T01:CDS
ACTCTGGGAAGGTTGTTGTA+CGG 0.578741 1:-99085494 None:intergenic
TGCAAACTTCTGGAAGGGAA+AGG 0.579004 1:+99087378 MsG0180006031.01.T01:CDS
CTGCTATAATCATATGAAGA+GGG 0.579221 1:-99085466 None:intergenic
CAGTCTTTCGACTCTTCGGA+AGG 0.581994 1:-99086191 None:intergenic
TAAGGACAGTCGTGATCAGT+AGG 0.582500 1:-99084474 None:intergenic
GTGGTTTGCAAACTTCTGGA+AGG 0.583196 1:+99087372 MsG0180006031.01.T01:CDS
AGAACTCTGAATTTCCTTCG+CGG 0.584962 1:+99088398 MsG0180006031.01.T01:three_prime_UTR
AGCTGATGATACACCAATGG+TGG 0.587823 1:+99086130 MsG0180006031.01.T01:CDS
TCACGACTGTCCTTACACTT+AGG 0.588645 1:+99084482 MsG0180006031.01.T01:CDS
AAGATTGATGATATGGAGGA+TGG 0.590298 1:+99088034 MsG0180006031.01.T01:three_prime_UTR
AACAAAGTGGAGTCCTGTTG+TGG 0.594201 1:+99086737 MsG0180006031.01.T01:CDS
TCCCTTCAGGCAGACCACCT+TGG 0.595487 1:-99086797 None:intergenic
ATCTTATAACGTTGATAAGG+GGG 0.598467 1:+99085639 MsG0180006031.01.T01:CDS
AGATACAAGGGACGATGCCA+AGG 0.599966 1:+99086780 MsG0180006031.01.T01:CDS
GAGATATGTTTCAAGGATCG+TGG 0.601230 1:+99087038 MsG0180006031.01.T01:CDS
GATCTTATAACGTTGATAAG+GGG 0.602409 1:+99085638 MsG0180006031.01.T01:CDS
TAAACACAAGTTTGTAAACA+GGG 0.602607 1:-99088602 None:intergenic
AAACATCAATTAATCAACAA+AGG 0.602969 1:-99088451 None:intergenic
AGCGGCAAGAGATCAGGTCC+AGG 0.603757 1:+99086995 MsG0180006031.01.T01:CDS
GATTTGAAGTGGCAAAAGAG+TGG 0.603772 1:+99086093 MsG0180006031.01.T01:CDS
TTTGAAGTTGGTAGGAGCGA+GGG 0.606496 1:-99088495 None:intergenic
CAATACCTAGAGATAGAAGA+AGG 0.607263 1:+99088059 MsG0180006031.01.T01:three_prime_UTR
TTATACAAAGCCATTAGGAT+CGG 0.612198 1:-99089104 None:intergenic
GAAGGGAAAGGCAAATGGAG+AGG 0.613049 1:+99087390 MsG0180006031.01.T01:CDS
CATGTGGCTAACCTTATCCA+GGG 0.613529 1:+99088161 MsG0180006031.01.T01:three_prime_UTR
AGCCATTAGGATCGGTCTAG+AGG 0.613884 1:-99089096 None:intergenic
TCACGTGACTGAAAGGTCAC+GGG 0.614117 1:+99087591 MsG0180006031.01.T01:three_prime_UTR
ATTTGAAGTGGCAAAAGAGT+GGG 0.615548 1:+99086094 MsG0180006031.01.T01:CDS
GTTTGAAGTTGGTAGGAGCG+AGG 0.616974 1:-99088496 None:intergenic
ATATAGGGGAGGAAGATACA+AGG 0.618509 1:+99086767 MsG0180006031.01.T01:CDS
TCTGGGCCCTGGATTTGAAG+TGG 0.618907 1:+99086082 MsG0180006031.01.T01:CDS
AACACAAGTTTGTAAACAGG+GGG 0.619819 1:-99088600 None:intergenic
GGATGATGTCATGCACGGCA+AGG 0.621090 1:+99087063 MsG0180006031.01.T01:CDS
GAGGTGTCGAGATAAATGGC+AGG 0.621686 1:+99088116 MsG0180006031.01.T01:three_prime_UTR
AACGTGATTTGTCAACAAAG+TGG 0.625546 1:+99086724 MsG0180006031.01.T01:CDS
GTGTGAATGCAAATGGAGAG+AGG 0.626401 1:+99087488 MsG0180006031.01.T01:CDS
GCCTCACACCAACAGGAAGG+TGG 0.629056 1:-99086169 None:intergenic
AATCTGTCATCTATAATACT+GGG 0.629535 1:-99085676 None:intergenic
GCTGCTATAATCATATGAAG+AGG 0.630324 1:-99085467 None:intergenic
TGGAGGGATGATGTCATGCA+CGG 0.631513 1:+99087058 MsG0180006031.01.T01:CDS
CTAAAGCTCCCGCATACACA+GGG 0.634368 1:-99087697 None:intergenic
CGTACAATACACCAAAATGG+TGG 0.636503 1:+99087661 MsG0180006031.01.T01:three_prime_UTR
TTTGACTTTATATTTACAGG+AGG 0.636730 1:+99086698 MsG0180006031.01.T01:CDS
GTTGTGGAAATACAATATAG+GGG 0.640990 1:+99086753 MsG0180006031.01.T01:CDS
GAATCTAATGAAGTACCAGA+TGG 0.643994 1:-99088334 None:intergenic
AGTATACCACCACTCTGGGA+AGG 0.644388 1:-99085505 None:intergenic
AGGCAAGGAAGTTTGAACCT+AGG 0.644931 1:+99089045 MsG0180006031.01.T01:three_prime_UTR
TATGTTTCAAGGATCGTGGA+GGG 0.652467 1:+99087042 MsG0180006031.01.T01:CDS
TCAGACCGAATCAATAAGAG+AGG 0.656064 1:+99088097 MsG0180006031.01.T01:three_prime_UTR
GGAAGCTGATGATACACCAA+TGG 0.657220 1:+99086127 MsG0180006031.01.T01:CDS
AGTAACAAACCAAAGAAGCA+CGG 0.658630 1:+99086314 MsG0180006031.01.T01:CDS
AAACACAAGTTTGTAAACAG+GGG 0.659300 1:-99088601 None:intergenic
ATGACTAAGCTGGATAAATG+TGG 0.659330 1:+99088926 MsG0180006031.01.T01:three_prime_UTR
TAGCAATCAATTGATCCATG+TGG 0.666575 1:+99088145 MsG0180006031.01.T01:three_prime_UTR
ATGTGGCTAACCTTATCCAG+GGG 0.668253 1:+99088162 MsG0180006031.01.T01:three_prime_UTR
AAGGCCTCACACCAACAGGA+AGG 0.668342 1:-99086172 None:intergenic
GTGGAAATACAATATAGGGG+AGG 0.668898 1:+99086756 MsG0180006031.01.T01:CDS
GTCAAACAACAGAATACACG+AGG 0.682365 1:+99084407 MsG0180006031.01.T01:CDS
CAACAACCTTCCCAGAGTGG+TGG 0.686943 1:+99085499 MsG0180006031.01.T01:CDS
ATATGTTTCAAGGATCGTGG+AGG 0.691184 1:+99087041 MsG0180006031.01.T01:CDS
TACAAGGGACGATGCCAAGG+TGG 0.695745 1:+99086783 MsG0180006031.01.T01:CDS
GAAAGGCAAATGGAGAGGGG+CGG 0.715092 1:+99087395 MsG0180006031.01.T01:CDS
TATAGGGGAGGAAGATACAA+GGG 0.718321 1:+99086768 MsG0180006031.01.T01:CDS
GTACAACAACCTTCCCAGAG+TGG 0.725672 1:+99085496 MsG0180006031.01.T01:CDS
TGTGGCTAACCTTATCCAGG+GGG 0.732149 1:+99088163 MsG0180006031.01.T01:three_prime_UTR
TATGATGGTTTATGGCACAG+CGG 0.781523 1:+99086977 MsG0180006031.01.T01:CDS
TCAAACAACAGAATACACGA+GGG 0.791232 1:+99084408 MsG0180006031.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTCTACTTTATTTTTA+AGG + Chr1:99089151-99089170 MsG0180006031.01.T01:three_prime_UTR 10.0%
!!! AAAAAAGAGAAAAAGAATTT+TGG - Chr1:99086876-99086895 None:intergenic 15.0%
!!! AAATTCTTTTTCTCTTTTTT+TGG + Chr1:99086876-99086895 MsG0180006031.01.T01:intron 15.0%
!!! AAATTTTACCCAAAAAATAA+TGG - Chr1:99088754-99088773 None:intergenic 15.0%
!!! ACTATTAACCATTATTTTTT+GGG + Chr1:99088743-99088762 MsG0180006031.01.T01:three_prime_UTR 15.0%
!!! AGGATAAAATTTGTTTAAAA+AGG - Chr1:99085825-99085844 None:intergenic 15.0%
!!! GCAATTATAATTTTATACAA+TGG - Chr1:99084289-99084308 None:intergenic 15.0%
!!! TAAAATTTGTTTAAAAAGGA+AGG - Chr1:99085821-99085840 None:intergenic 15.0%
!!! TATAAATAATTTTACTTGGT+AGG + Chr1:99087956-99087975 MsG0180006031.01.T01:three_prime_UTR 15.0%
!!! TTATTTTTTGGGTAAAATTT+CGG + Chr1:99088754-99088773 MsG0180006031.01.T01:three_prime_UTR 15.0%
!!! TTCGTATAAATAATTTTACT+TGG + Chr1:99087952-99087971 MsG0180006031.01.T01:three_prime_UTR 15.0%
!!! TTGAGGTAATTTTATTATTT+TGG + Chr1:99088213-99088232 MsG0180006031.01.T01:three_prime_UTR 15.0%
!! AAAATTACCTTCTTCATTAA+CGG - Chr1:99085921-99085940 None:intergenic 20.0%
!! AAACATCAATTAATCAACAA+AGG - Chr1:99088454-99088473 None:intergenic 20.0%
!! AAGTTTAATTGTAAAGTAGT+AGG + Chr1:99086579-99086598 MsG0180006031.01.T01:intron 20.0%
!! AGTATTATTAATGATATTGG+TGG + Chr1:99086444-99086463 MsG0180006031.01.T01:intron 20.0%
!! GTATTATTAATGATATTGGT+GGG + Chr1:99086445-99086464 MsG0180006031.01.T01:intron 20.0%
!! GTCAGTATTATTAATGATAT+TGG + Chr1:99086441-99086460 MsG0180006031.01.T01:intron 20.0%
!! GTTCTTTATACTAAGAATAA+AGG + Chr1:99086524-99086543 MsG0180006031.01.T01:CDS 20.0%
!! TAAACTTTAACAAATCTCAA+TGG - Chr1:99086566-99086585 None:intergenic 20.0%
!! TTGAAAATATATTGTAATCC+AGG + Chr1:99086657-99086676 MsG0180006031.01.T01:intron 20.0%
!!! AACATTTTGACATTTCAAAT+TGG - Chr1:99088641-99088660 None:intergenic 20.0%
!!! AACTTTTCAAACTTTACAAT+TGG + Chr1:99088669-99088688 MsG0180006031.01.T01:three_prime_UTR 20.0%
!!! ACAGTAATAATCACAATTTT+AGG - Chr1:99088954-99088973 None:intergenic 20.0%
!!! ATTTACATCTTCATTTTTGA+AGG + Chr1:99086277-99086296 MsG0180006031.01.T01:CDS 20.0%
!!! GACTATTAACCATTATTTTT+TGG + Chr1:99088742-99088761 MsG0180006031.01.T01:three_prime_UTR 20.0%
!!! TAATTTTATTATTTTGGTCC+AGG + Chr1:99088219-99088238 MsG0180006031.01.T01:three_prime_UTR 20.0%
!!! TCTTGATTTGTTAAGTATTA+GGG + Chr1:99085412-99085431 MsG0180006031.01.T01:intron 20.0%
!!! TGAATGACAATTATTTTCAA+AGG - Chr1:99085297-99085316 None:intergenic 20.0%
!!! TGATTTTAAATCGATAAAAC+TGG + Chr1:99084966-99084985 MsG0180006031.01.T01:intron 20.0%
!!! TTCTTGATTTGTTAAGTATT+AGG + Chr1:99085411-99085430 MsG0180006031.01.T01:intron 20.0%
!!! TTGTTGATTAATTGATGTTT+GGG + Chr1:99088454-99088473 MsG0180006031.01.T01:three_prime_UTR 20.0%
!!! TTTGTTGATTAATTGATGTT+TGG + Chr1:99088453-99088472 MsG0180006031.01.T01:three_prime_UTR 20.0%
! AAAATATATTGTAATCCAGG+TGG + Chr1:99086660-99086679 MsG0180006031.01.T01:intron 25.0%
! AAATCTGTCATCTATAATAC+TGG - Chr1:99085680-99085699 None:intergenic 25.0%
! AATACACATGTGAACAAAAA+GGG - Chr1:99087735-99087754 None:intergenic 25.0%
! AATCTGTCATCTATAATACT+GGG - Chr1:99085679-99085698 None:intergenic 25.0%
! ACGCGAAGTATAATTAATTA+TGG - Chr1:99088550-99088569 None:intergenic 25.0%
! ACTTTACAATTGGAGTATAT+AGG + Chr1:99088679-99088698 MsG0180006031.01.T01:three_prime_UTR 25.0%
! ATGATGCTTATCAATTATGT+AGG + Chr1:99087321-99087340 MsG0180006031.01.T01:intron 25.0%
! CACGTAGAATATTAACAAAA+GGG + Chr1:99088356-99088375 MsG0180006031.01.T01:three_prime_UTR 25.0%
! CGCGAAGTATAATTAATTAT+GGG - Chr1:99088549-99088568 None:intergenic 25.0%
! CTTTGTATGTTGTATAATAG+CGG + Chr1:99089004-99089023 MsG0180006031.01.T01:three_prime_UTR 25.0%
! GAAATATCTATGATGGTTTA+TGG + Chr1:99086969-99086988 MsG0180006031.01.T01:CDS 25.0%
! GACCAGAGTTAAATTTAAAA+CGG - Chr1:99087095-99087114 None:intergenic 25.0%
! GTATAATAGGTGTTTATTGT+GGG + Chr1:99089121-99089140 MsG0180006031.01.T01:three_prime_UTR 25.0%
! GTTAAAACTTGGATAAAGAT+AGG + Chr1:99088423-99088442 MsG0180006031.01.T01:three_prime_UTR 25.0%
! TAAACACAAGTTTGTAAACA+GGG - Chr1:99088605-99088624 None:intergenic 25.0%
! TAAATGAAAATCTACAACCA+GGG + Chr1:99086926-99086945 MsG0180006031.01.T01:intron 25.0%
! TAACAGAAAGAAGACTTAAA+CGG - Chr1:99087809-99087828 None:intergenic 25.0%
! TAAGTGATTGACAATATACA+AGG + Chr1:99085066-99085085 MsG0180006031.01.T01:intron 25.0%
! TAATACACATGTGAACAAAA+AGG - Chr1:99087736-99087755 None:intergenic 25.0%
! TCACGTAGAATATTAACAAA+AGG + Chr1:99088355-99088374 MsG0180006031.01.T01:three_prime_UTR 25.0%
! TGATGCTTATCAATTATGTA+GGG + Chr1:99087322-99087341 MsG0180006031.01.T01:intron 25.0%
! TGTATAATAGGTGTTTATTG+TGG + Chr1:99089120-99089139 MsG0180006031.01.T01:three_prime_UTR 25.0%
! TGTTGTGGAAATACAATATA+GGG + Chr1:99086752-99086771 MsG0180006031.01.T01:CDS 25.0%
! TTAAACACAAGTTTGTAAAC+AGG - Chr1:99088606-99088625 None:intergenic 25.0%
! TTAAATGAAAATCTACAACC+AGG + Chr1:99086925-99086944 MsG0180006031.01.T01:intron 25.0%
!! AGATCTTATAACGTTGATAA+GGG + Chr1:99085637-99085656 MsG0180006031.01.T01:CDS 25.0%
!! AGGTTTGACTTTATATTTAC+AGG + Chr1:99086695-99086714 MsG0180006031.01.T01:CDS 25.0%
!! AGTAGTAAAGATTGATGATA+TGG + Chr1:99088027-99088046 MsG0180006031.01.T01:three_prime_UTR 25.0%
!! ATTTTATACAATGGAAGAGA+AGG - Chr1:99084280-99084299 None:intergenic 25.0%
!! TTTGACTTTATATTTACAGG+AGG + Chr1:99086698-99086717 MsG0180006031.01.T01:CDS 25.0%
!!! CTTGATTTGTTAAGTATTAG+GGG + Chr1:99085413-99085432 MsG0180006031.01.T01:intron 25.0%
!!! GGATAATTATTTTTCTGTGT+TGG + Chr1:99085948-99085967 MsG0180006031.01.T01:intron 25.0%
!!! TAATGTAAGAGTGTTTAGAT+AGG + Chr1:99085104-99085123 MsG0180006031.01.T01:intron 25.0%
!!! TACCGTTTTAAATTTAACTC+TGG + Chr1:99087090-99087109 MsG0180006031.01.T01:CDS 25.0%
!!! TATAATTGCCATGTTTTTTC+AGG + Chr1:99084300-99084319 MsG0180006031.01.T01:CDS 25.0%
!!! TGAAGCTCGTATTTTTTTTT+TGG - Chr1:99084827-99084846 None:intergenic 25.0%
!!! TTTTTTTGTGTGAATGCAAA+TGG + Chr1:99087481-99087500 MsG0180006031.01.T01:CDS 25.0%
AAAAACAAGAGGAAAATGCA+GGG - Chr1:99085542-99085561 None:intergenic 30.0%
AAACACAAGTTTGTAAACAG+GGG - Chr1:99088604-99088623 None:intergenic 30.0%
AAAGCTCGTATTTGACAATA+AGG - Chr1:99084804-99084823 None:intergenic 30.0%
AAATGAAAATCTACAACCAG+GGG + Chr1:99086927-99086946 MsG0180006031.01.T01:intron 30.0%
AAATTAAAGTTCAGGACTTG+AGG - Chr1:99087878-99087897 None:intergenic 30.0%
AAGAATGGAGATATGTTTCA+AGG + Chr1:99087031-99087050 MsG0180006031.01.T01:CDS 30.0%
AAGATACTTACCTAAGTGTA+AGG - Chr1:99084495-99084514 None:intergenic 30.0%
AATTATTCTCTTCAGCTTGT+TGG - Chr1:99086902-99086921 None:intergenic 30.0%
ACCTATTATACAAAGCCATT+AGG - Chr1:99089112-99089131 None:intergenic 30.0%
ATATACAAGGATCTGATCAT+TGG + Chr1:99085079-99085098 MsG0180006031.01.T01:intron 30.0%
ATTTGGATCCTGAAAAAACA+TGG - Chr1:99084311-99084330 None:intergenic 30.0%
CTAAAATTAATGTCCTGGAT+TGG - Chr1:99087906-99087925 None:intergenic 30.0%
CTATATTGTATTTCCACAAC+AGG - Chr1:99086753-99086772 None:intergenic 30.0%
CTGCTATAATCATATGAAGA+GGG - Chr1:99085469-99085488 None:intergenic 30.0%
CTGTTGTGGAAATACAATAT+AGG + Chr1:99086751-99086770 MsG0180006031.01.T01:CDS 30.0%
GAATAGGTACACTGAAATTT+GGG + Chr1:99088866-99088885 MsG0180006031.01.T01:three_prime_UTR 30.0%
GAATTTGTGTGATGATTATG+AGG + Chr1:99085240-99085259 MsG0180006031.01.T01:intron 30.0%
GAGATCTTATAACGTTGATA+AGG + Chr1:99085636-99085655 MsG0180006031.01.T01:CDS 30.0%
GATAATGAAAGAAGATAGAG+AGG - Chr1:99085772-99085791 None:intergenic 30.0%
GCTATATCACTATCATTGAT+GGG - Chr1:99084367-99084386 None:intergenic 30.0%
GGAAAAAAAAAACTCCATCA+AGG - Chr1:99084876-99084895 None:intergenic 30.0%
GGAACATTCTATTTCAAGAA+TGG + Chr1:99087016-99087035 MsG0180006031.01.T01:CDS 30.0%
GTTATAGTTGTCTGTAATTG+AGG + Chr1:99088196-99088215 MsG0180006031.01.T01:three_prime_UTR 30.0%
GTTGTGGAAATACAATATAG+GGG + Chr1:99086753-99086772 MsG0180006031.01.T01:CDS 30.0%
TACAGCAGTAATTTGAGTAT+TGG - Chr1:99087180-99087199 None:intergenic 30.0%
TACTAAGAATAAAGGAAGTG+TGG + Chr1:99086532-99086551 MsG0180006031.01.T01:intron 30.0%
TATGAATCCGTTAATGAAGA+AGG + Chr1:99085911-99085930 MsG0180006031.01.T01:CDS 30.0%
TCACACTAAAATTAATGTCC+TGG - Chr1:99087911-99087930 None:intergenic 30.0%
TCTAGCAACTGTTATTGTAT+GGG + Chr1:99087209-99087228 MsG0180006031.01.T01:intron 30.0%
TGAATAGGTACACTGAAATT+TGG + Chr1:99088865-99088884 MsG0180006031.01.T01:three_prime_UTR 30.0%
TGCTATATCACTATCATTGA+TGG - Chr1:99084368-99084387 None:intergenic 30.0%
TTATACAAAGCCATTAGGAT+CGG - Chr1:99089107-99089126 None:intergenic 30.0%
TTATCCTGTATTACATGACA+GGG + Chr1:99085838-99085857 MsG0180006031.01.T01:intron 30.0%
TTCTAGCAACTGTTATTGTA+TGG + Chr1:99087208-99087227 MsG0180006031.01.T01:intron 30.0%
TTCTTGAAATAGAATGTTCC+TGG - Chr1:99087016-99087035 None:intergenic 30.0%
TTCTTTGGCAATTTCAAAGA+CGG + Chr1:99087442-99087461 MsG0180006031.01.T01:CDS 30.0%
TTGCATTCACACAAAAAAAC+TGG - Chr1:99087480-99087499 None:intergenic 30.0%
TTTATCCTGTATTACATGAC+AGG + Chr1:99085837-99085856 MsG0180006031.01.T01:intron 30.0%
TTTCTTCCTCATGTTGTATA+CGG + Chr1:99084849-99084868 MsG0180006031.01.T01:intron 30.0%
TTTGGTAAAACACTAGAAGA+AGG + Chr1:99087295-99087314 MsG0180006031.01.T01:intron 30.0%
! AAGTTCAGAAAACTTTTTGC+TGG + Chr1:99084748-99084767 MsG0180006031.01.T01:intron 30.0%
! AATTTCAAGTGTCTGTTAAG+TGG + Chr1:99085193-99085212 MsG0180006031.01.T01:intron 30.0%
! ACAGACACTTGAAATTCTTT+TGG - Chr1:99085189-99085208 None:intergenic 30.0%
! AGTAAAGATTGATGATATGG+AGG + Chr1:99088030-99088049 MsG0180006031.01.T01:three_prime_UTR 30.0%
! ATCTTATAACGTTGATAAGG+GGG + Chr1:99085639-99085658 MsG0180006031.01.T01:CDS 30.0%
! GATCTTATAACGTTGATAAG+GGG + Chr1:99085638-99085657 MsG0180006031.01.T01:CDS 30.0%
! GTATTGGTACAACATATCAA+CGG - Chr1:99087164-99087183 None:intergenic 30.0%
! GTGTGGTATGTTAATTTTGA+TGG + Chr1:99085346-99085365 MsG0180006031.01.T01:intron 30.0%
! TGTCTAATTTTCTGTAGTCT+CGG + Chr1:99084714-99084733 MsG0180006031.01.T01:intron 30.0%
! TTGTTCACTGTGTTTTATGA+GGG + Chr1:99087540-99087559 MsG0180006031.01.T01:three_prime_UTR 30.0%
! TTTTAGTGTGATAGTCATTG+TGG + Chr1:99087920-99087939 MsG0180006031.01.T01:three_prime_UTR 30.0%
!! AAGAAGGTAATTTTGAGAGA+TGG + Chr1:99085927-99085946 MsG0180006031.01.T01:intron 30.0%
!! CTTCATTAACGGATTCATAA+GGG - Chr1:99085910-99085929 None:intergenic 30.0%
!! GGTATTTTTACATACGATGA+AGG + Chr1:99089025-99089044 MsG0180006031.01.T01:three_prime_UTR 30.0%
!! TAACGTAAGAGTGTTTAGAT+AGG + Chr1:99085159-99085178 MsG0180006031.01.T01:intron 30.0%
!! TCATTTTTGAAGGCAAAACA+CGG + Chr1:99086287-99086306 MsG0180006031.01.T01:CDS 30.0%
!! TCCTAATGGCTTTGTATAAT+AGG + Chr1:99089108-99089127 MsG0180006031.01.T01:three_prime_UTR 30.0%
!! TCTTCATTAACGGATTCATA+AGG - Chr1:99085911-99085930 None:intergenic 30.0%
!! TTTATTTTCACACTGGTGAT+CGG + Chr1:99087350-99087369 MsG0180006031.01.T01:CDS 30.0%
!!! TATACTTCGCGTTTTTTAAG+AGG + Chr1:99088558-99088577 MsG0180006031.01.T01:three_prime_UTR 30.0%
!!! TTTGTTTTGTTGCAAAGAGA+AGG + Chr1:99084513-99084532 MsG0180006031.01.T01:intron 30.0%
AAAAGGGCAGATATCAATTC+TGG + Chr1:99088372-99088391 MsG0180006031.01.T01:three_prime_UTR 35.0%
AACACAAGTTTGTAAACAGG+GGG - Chr1:99088603-99088622 None:intergenic 35.0%
ACAACTTTACCATTGCATCA+AGG - Chr1:99087569-99087588 None:intergenic 35.0%
ACATGACATTGACATTTGAG+AGG + Chr1:99087830-99087849 MsG0180006031.01.T01:three_prime_UTR 35.0%
ACCATGATAAACCATGATAG+AGG + Chr1:99088517-99088536 MsG0180006031.01.T01:three_prime_UTR 35.0%
ACCTCTATCATGGTTTATCA+TGG - Chr1:99088521-99088540 None:intergenic 35.0%
ACTAAAGGTAGTGAAATTGC+TGG + Chr1:99085037-99085056 MsG0180006031.01.T01:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + Chr1:99087630-99087649 MsG0180006031.01.T01:three_prime_UTR 35.0%
AGTAACAAACCAAAGAAGCA+CGG + Chr1:99086314-99086333 MsG0180006031.01.T01:CDS 35.0%
ATAAGGGATAGGACAATTAG+AGG - Chr1:99085894-99085913 None:intergenic 35.0%
ATGACTAAGCTGGATAAATG+TGG + Chr1:99088926-99088945 MsG0180006031.01.T01:three_prime_UTR 35.0%
ATGCATATGACTGCACTATT+TGG - Chr1:99084328-99084347 None:intergenic 35.0%
CAAAAACAAGAGGAAAATGC+AGG - Chr1:99085543-99085562 None:intergenic 35.0%
CAATACCTAGAGATAGAAGA+AGG + Chr1:99088059-99088078 MsG0180006031.01.T01:three_prime_UTR 35.0%
CCTAAAAAATTCTTACCACC+TGG - Chr1:99086678-99086697 None:intergenic 35.0%
CGCACATAAATTAGACGTTT+CGG - Chr1:99087254-99087273 None:intergenic 35.0%
CTTCTTCTATCTCTAGGTAT+TGG - Chr1:99088061-99088080 None:intergenic 35.0%
GCTGCTATAATCATATGAAG+AGG - Chr1:99085470-99085489 None:intergenic 35.0%
GCTTATCAATTATGTAGGGT+TGG + Chr1:99087326-99087345 MsG0180006031.01.T01:intron 35.0%
GGAGATGGAAATATCTATGA+TGG + Chr1:99086962-99086981 MsG0180006031.01.T01:CDS 35.0%
GGTGGCTAATATAAGTTGTT+TGG - Chr1:99087788-99087807 None:intergenic 35.0%
TAAACAGTCTTTCGACTCTT+CGG - Chr1:99086198-99086217 None:intergenic 35.0%
TAAGAATTTACCTTCCCTTC+AGG - Chr1:99086813-99086832 None:intergenic 35.0%
TACAGAATTCATGCGTTTCT+AGG - Chr1:99086483-99086502 None:intergenic 35.0%
TAGCAATCAATTGATCCATG+TGG + Chr1:99088145-99088164 MsG0180006031.01.T01:three_prime_UTR 35.0%
TCAAACAACAGAATACACGA+GGG + Chr1:99084408-99084427 MsG0180006031.01.T01:CDS 35.0%
TGAAAATCCTGCAGAACTAA+AGG + Chr1:99085022-99085041 MsG0180006031.01.T01:intron 35.0%
TGACAGGCAATCAAACTAAA+CGG - Chr1:99088817-99088836 None:intergenic 35.0%
TGACTCAAATGTTAAATGCG+TGG + Chr1:99084687-99084706 MsG0180006031.01.T01:intron 35.0%
TGGTGGTCAAATTAAAGTTC+AGG - Chr1:99087886-99087905 None:intergenic 35.0%
TGTTCAAATCAACTTGCACT+AGG + Chr1:99086020-99086039 MsG0180006031.01.T01:intron 35.0%
TTCTTCCTCATGTTGTATAC+GGG + Chr1:99084850-99084869 MsG0180006031.01.T01:intron 35.0%
! AAATTAATGTCCTGGATTGG+TGG - Chr1:99087903-99087922 None:intergenic 35.0%
! AACGTGATTTGTCAACAAAG+TGG + Chr1:99086724-99086743 MsG0180006031.01.T01:CDS 35.0%
! AAGATTGATGATATGGAGGA+TGG + Chr1:99088034-99088053 MsG0180006031.01.T01:three_prime_UTR 35.0%
! ATTTGAAGTGGCAAAAGAGT+GGG + Chr1:99086094-99086113 MsG0180006031.01.T01:CDS 35.0%
! GAAGAATTTCAAGTGTCTGT+TGG + Chr1:99085134-99085153 MsG0180006031.01.T01:intron 35.0%
! GAATCTAATGAAGTACCAGA+TGG - Chr1:99088337-99088356 None:intergenic 35.0%
! GGTTTATCATGGTTTGAAGT+TGG - Chr1:99088510-99088529 None:intergenic 35.0%
! GTTGTTCACTGTGTTTTATG+AGG + Chr1:99087539-99087558 MsG0180006031.01.T01:three_prime_UTR 35.0%
! TACACTGAAATTTGGGATCA+CGG + Chr1:99088873-99088892 MsG0180006031.01.T01:three_prime_UTR 35.0%
! TATCATGGTTTGAAGTTGGT+AGG - Chr1:99088506-99088525 None:intergenic 35.0%
! TATGTCAAAAAAGCATGAGC+CGG + Chr1:99086229-99086248 MsG0180006031.01.T01:CDS 35.0%
! TCGTGTATTCTGTTGTTTGA+CGG - Chr1:99084408-99084427 None:intergenic 35.0%
! TGTTCACTGTGTTTTATGAG+GGG + Chr1:99087541-99087560 MsG0180006031.01.T01:three_prime_UTR 35.0%
! TTTTACATACGATGAAGGCA+AGG + Chr1:99089030-99089049 MsG0180006031.01.T01:three_prime_UTR 35.0%
!! GGAAAAAGAAGTGTTGTTGA+AGG + Chr1:99087851-99087870 MsG0180006031.01.T01:three_prime_UTR 35.0%
!! GGTACTAGATTTTGGAAAAC+AGG + Chr1:99084995-99085014 MsG0180006031.01.T01:intron 35.0%
!! GTCTTTGAAATTGCCAAAGA+AGG - Chr1:99087443-99087462 None:intergenic 35.0%
!! TTAACGGATTCATAAGGGAT+AGG - Chr1:99085905-99085924 None:intergenic 35.0%
!! TTTAATTTGACCACCAATCC+AGG + Chr1:99087890-99087909 MsG0180006031.01.T01:three_prime_UTR 35.0%
!! TTTAGTTTGATTGCCTGTCA+TGG + Chr1:99088817-99088836 MsG0180006031.01.T01:three_prime_UTR 35.0%
!!! AAAGAATTTTGGAGTCTAGC+TGG - Chr1:99086865-99086884 None:intergenic 35.0%
!!! CCAGGTGGTAAGAATTTTTT+AGG + Chr1:99086675-99086694 MsG0180006031.01.T01:intron 35.0%
!!! CGGTCTGATGTTTTTTCTTT+TGG - Chr1:99088085-99088104 None:intergenic 35.0%
!!! CTGCATTTTCCTCTTGTTTT+TGG + Chr1:99085541-99085560 MsG0180006031.01.T01:CDS 35.0%
!!! GGTTGGTTTTATTTTCACAC+TGG + Chr1:99087343-99087362 MsG0180006031.01.T01:CDS 35.0%
!!! TCCTCTTGTTTTTGGCTTTT+GGG + Chr1:99085549-99085568 MsG0180006031.01.T01:CDS 35.0%
!!! TTCCTCTTGTTTTTGGCTTT+TGG + Chr1:99085548-99085567 MsG0180006031.01.T01:CDS 35.0%
AATCGATAAAACTGGCACTG+AGG + Chr1:99084974-99084993 MsG0180006031.01.T01:intron 40.0%
ACCACAAGCGTAAAATCAGA+AGG - Chr1:99084897-99084916 None:intergenic 40.0%
ACCAGATCAGATGTAAGCAA+TGG + Chr1:99085378-99085397 MsG0180006031.01.T01:intron 40.0%
AGAACTCTGAATTTCCTTCG+CGG + Chr1:99088398-99088417 MsG0180006031.01.T01:three_prime_UTR 40.0%
ATATAGGGGAGGAAGATACA+AGG + Chr1:99086767-99086786 MsG0180006031.01.T01:CDS 40.0%
ATATGTTTCAAGGATCGTGG+AGG + Chr1:99087041-99087060 MsG0180006031.01.T01:CDS 40.0%
ATCATCAGCTTCCCTTTCTT+GGG - Chr1:99086120-99086139 None:intergenic 40.0%
ATCCAATGACCAAGAAGCAA+TGG - Chr1:99085325-99085344 None:intergenic 40.0%
ATGCTTAGGTTATCCACCAT+TGG - Chr1:99086146-99086165 None:intergenic 40.0%
CAGAAAGAAGACTTAAACGG+TGG - Chr1:99087806-99087825 None:intergenic 40.0%
CAGAAAGTCAATTCCATGAC+AGG - Chr1:99088833-99088852 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + Chr1:99087629-99087648 MsG0180006031.01.T01:three_prime_UTR 40.0%
CCAGATCAGATGTAAGCAAT+GGG + Chr1:99085379-99085398 MsG0180006031.01.T01:intron 40.0%
CGTACAATACACCAAAATGG+TGG + Chr1:99087661-99087680 MsG0180006031.01.T01:three_prime_UTR 40.0%
CTGCGTACAATACACCAAAA+TGG + Chr1:99087658-99087677 MsG0180006031.01.T01:three_prime_UTR 40.0%
CTGTGTACTGTCATGTGAAT+AGG + Chr1:99088850-99088869 MsG0180006031.01.T01:three_prime_UTR 40.0%
CTTGTGTAAAAAACAGGGTG+AGG + Chr1:99087635-99087654 MsG0180006031.01.T01:three_prime_UTR 40.0%
GAATCCCTGTCATGTAATAC+AGG - Chr1:99085845-99085864 None:intergenic 40.0%
GAGATATGTTTCAAGGATCG+TGG + Chr1:99087038-99087057 MsG0180006031.01.T01:CDS 40.0%
GAGCCAAACACAAGCAATAA+CGG + Chr1:99085721-99085740 MsG0180006031.01.T01:CDS 40.0%
GGAAACCTGTCAAACATTCT+TGG - Chr1:99085448-99085467 None:intergenic 40.0%
GGTAGTATACATAACGTCCT+AGG - Chr1:99089065-99089084 None:intergenic 40.0%
GTCAAACAACAGAATACACG+AGG + Chr1:99084407-99084426 MsG0180006031.01.T01:CDS 40.0%
GTCAAACATTCTTGGACGTA+TGG - Chr1:99085440-99085459 None:intergenic 40.0%
GTGGAAATACAATATAGGGG+AGG + Chr1:99086756-99086775 MsG0180006031.01.T01:CDS 40.0%
GTTTAGACAGATGACTAAGC+TGG + Chr1:99088916-99088935 MsG0180006031.01.T01:three_prime_UTR 40.0%
TACGTCCAAGAATGTTTGAC+AGG + Chr1:99085440-99085459 MsG0180006031.01.T01:intron 40.0%
TATAGGGGAGGAAGATACAA+GGG + Chr1:99086768-99086787 MsG0180006031.01.T01:CDS 40.0%
TATCATCAGCTTCCCTTTCT+TGG - Chr1:99086121-99086140 None:intergenic 40.0%
TATGATGGTTTATGGCACAG+CGG + Chr1:99086977-99086996 MsG0180006031.01.T01:CDS 40.0%
TATGTTTCAAGGATCGTGGA+GGG + Chr1:99087042-99087061 MsG0180006031.01.T01:CDS 40.0%
TCAGACCGAATCAATAAGAG+AGG + Chr1:99088097-99088116 MsG0180006031.01.T01:three_prime_UTR 40.0%
TGTTATTGTATGGGCCATGT+GGG + Chr1:99087218-99087237 MsG0180006031.01.T01:intron 40.0%
TTCAGTAGACCATTGCTTCT+TGG + Chr1:99085313-99085332 MsG0180006031.01.T01:intron 40.0%
TTCTTGGTCATTGGATAGTG+TGG + Chr1:99085329-99085348 MsG0180006031.01.T01:intron 40.0%
TTGGCAATTTCAAAGACGGA+TGG + Chr1:99087446-99087465 MsG0180006031.01.T01:CDS 40.0%
! ACGTTGATAAGGGGGAAAAT+AGG + Chr1:99085647-99085666 MsG0180006031.01.T01:CDS 40.0%
! CGACACCTCTCTTATTGATT+CGG - Chr1:99088105-99088124 None:intergenic 40.0%
! GATTTGAAGTGGCAAAAGAG+TGG + Chr1:99086093-99086112 MsG0180006031.01.T01:CDS 40.0%
! TCCTTCTGATTTTACGCTTG+TGG + Chr1:99084893-99084912 MsG0180006031.01.T01:intron 40.0%
! TGGTTTGCAAACTTCTGGAA+GGG + Chr1:99087373-99087392 MsG0180006031.01.T01:CDS 40.0%
! TTTGGCCTTCTTCTATCTCT+AGG - Chr1:99088067-99088086 None:intergenic 40.0%
!! AAGAGAGGTGTCGAGATAAA+TGG + Chr1:99088112-99088131 MsG0180006031.01.T01:three_prime_UTR 40.0%
!! CTTTTGCCACTTCAAATCCA+GGG - Chr1:99086091-99086110 None:intergenic 40.0%
!! GAGAGCACTGACTATTACTT+TGG + Chr1:99087277-99087296 MsG0180006031.01.T01:intron 40.0%
!! TCTTTTGCCACTTCAAATCC+AGG - Chr1:99086092-99086111 None:intergenic 40.0%
!! TTCACTACCTTTAGTTCTGC+AGG - Chr1:99085032-99085051 None:intergenic 40.0%
!!! CACCCTGTTTTTTACACAAG+AGG - Chr1:99087635-99087654 None:intergenic 40.0%
!!! CCTCTTGTTTTTGGCTTTTG+GGG + Chr1:99085550-99085569 MsG0180006031.01.T01:CDS 40.0%
AAAAGAGTGGGCCCAAGAAA+GGG + Chr1:99086106-99086125 MsG0180006031.01.T01:CDS 45.0%
AACAAAGTGGAGTCCTGTTG+TGG + Chr1:99086737-99086756 MsG0180006031.01.T01:CDS 45.0%
AACCTCTAGACCGATCCTAA+TGG + Chr1:99089094-99089113 MsG0180006031.01.T01:three_prime_UTR 45.0%
AAGGGAAAGGCAAATGGAGA+GGG + Chr1:99087391-99087410 MsG0180006031.01.T01:CDS 45.0%
ACAGTCGTGATCAGTAGGTT+GGG - Chr1:99084472-99084491 None:intergenic 45.0%
ACCAACTTGTCAAAGCCATC+TGG + Chr1:99088319-99088338 MsG0180006031.01.T01:three_prime_UTR 45.0%
AGCATATTCCACCTTCCTGT+TGG + Chr1:99086161-99086180 MsG0180006031.01.T01:CDS 45.0%
AGCTGATGATACACCAATGG+TGG + Chr1:99086130-99086149 MsG0180006031.01.T01:CDS 45.0%
AGGAAAATGCAGGGCAAGTT+TGG - Chr1:99085533-99085552 None:intergenic 45.0%
AGGCAAGGAAGTTTGAACCT+AGG + Chr1:99089045-99089064 MsG0180006031.01.T01:three_prime_UTR 45.0%
AGTCAGCAACAAACTGTCTC+TGG + Chr1:99085580-99085599 MsG0180006031.01.T01:CDS 45.0%
ATGGGATCGAACCTCTATCA+TGG - Chr1:99088531-99088550 None:intergenic 45.0%
ATGTGGCTAACCTTATCCAG+GGG + Chr1:99088162-99088181 MsG0180006031.01.T01:three_prime_UTR 45.0%
ATGTTGTATACGGGCCTTGA+TGG + Chr1:99084859-99084878 MsG0180006031.01.T01:intron 45.0%
CAGATGTAAGCAATGGGACA+AGG + Chr1:99085385-99085404 MsG0180006031.01.T01:intron 45.0%
CAGCTTGGAAACTGGAATCT+GGG + Chr1:99086065-99086084 MsG0180006031.01.T01:CDS 45.0%
CAGGAAGGTGGAATATGCTT+AGG - Chr1:99086160-99086179 None:intergenic 45.0%
CATGCTTAGTGTCAATCGCA+CGG - Chr1:99084649-99084668 None:intergenic 45.0%
CATGTGGCTAACCTTATCCA+GGG + Chr1:99088161-99088180 MsG0180006031.01.T01:three_prime_UTR 45.0%
CCCATTGCTTACATCTGATC+TGG - Chr1:99085382-99085401 None:intergenic 45.0%
CCCCAAAAGCCAAAAACAAG+AGG - Chr1:99085553-99085572 None:intergenic 45.0%
CCTTCGCGGAAGTTAAAACT+TGG + Chr1:99088412-99088431 MsG0180006031.01.T01:three_prime_UTR 45.0%
CTGTTATTGTATGGGCCATG+TGG + Chr1:99087217-99087236 MsG0180006031.01.T01:intron 45.0%
GACCATTGCTTCTTGGTCAT+TGG + Chr1:99085320-99085339 MsG0180006031.01.T01:intron 45.0%
GAGCCGTTATTGCTTGTGTT+TGG - Chr1:99085727-99085746 None:intergenic 45.0%
GCAATTTCAAAGACGGATGG+CGG + Chr1:99087449-99087468 MsG0180006031.01.T01:CDS 45.0%
GCTCAAAGTTGTCTGCTTCA+AGG + Chr1:99085743-99085762 MsG0180006031.01.T01:CDS 45.0%
GGAAGCTGATGATACACCAA+TGG + Chr1:99086127-99086146 MsG0180006031.01.T01:CDS 45.0%
GGATAGTATACCACCACTCT+GGG - Chr1:99085512-99085531 None:intergenic 45.0%
GTCAGCAACAAACTGTCTCT+GGG + Chr1:99085581-99085600 MsG0180006031.01.T01:CDS 45.0%
GTGTGAATGCAAATGGAGAG+AGG + Chr1:99087488-99087507 MsG0180006031.01.T01:CDS 45.0%
GTTATTGTATGGGCCATGTG+GGG + Chr1:99087219-99087238 MsG0180006031.01.T01:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG + Chr1:99087584-99087603 MsG0180006031.01.T01:three_prime_UTR 45.0%
TAAGGACAGTCGTGATCAGT+AGG - Chr1:99084477-99084496 None:intergenic 45.0%
TCACGACTGTCCTTACACTT+AGG + Chr1:99084482-99084501 MsG0180006031.01.T01:CDS 45.0%
TCTGTTAAGTGGCTGTGAAC+AGG + Chr1:99085204-99085223 MsG0180006031.01.T01:intron 45.0%
TGGATAGTATACCACCACTC+TGG - Chr1:99085513-99085532 None:intergenic 45.0%
TTATCCAGGGGGAAAAGTCT+TGG + Chr1:99088174-99088193 MsG0180006031.01.T01:three_prime_UTR 45.0%
! AAGACTTTTCCCCCTGGATA+AGG - Chr1:99088175-99088194 None:intergenic 45.0%
! AAGTCTGGTGATGCCTTCTT+TGG + Chr1:99087427-99087446 MsG0180006031.01.T01:CDS 45.0%
! ACAAACTGTCTCTGGGAAAG+AGG + Chr1:99085588-99085607 MsG0180006031.01.T01:CDS 45.0%
! ACGCTTGTGGTTTGCATCAA+TGG + Chr1:99084906-99084925 MsG0180006031.01.T01:intron 45.0%
! ACTCTGGGAAGGTTGTTGTA+CGG - Chr1:99085497-99085516 None:intergenic 45.0%
! ATAACCAAGACTTTTCCCCC+TGG - Chr1:99088181-99088200 None:intergenic 45.0%
! ATCGGTGGTTTGCAAACTTC+TGG + Chr1:99087368-99087387 MsG0180006031.01.T01:CDS 45.0%
! ATTTTCACACTGGTGATCGG+TGG + Chr1:99087353-99087372 MsG0180006031.01.T01:CDS 45.0%
! CGCTTGTGGTTTGCATCAAT+GGG + Chr1:99084907-99084926 MsG0180006031.01.T01:intron 45.0%
! GTGGTTTGCAAACTTCTGGA+AGG + Chr1:99087372-99087391 MsG0180006031.01.T01:CDS 45.0%
! GTGGTTTGCATCAATGGGAT+GGG + Chr1:99084912-99084931 MsG0180006031.01.T01:intron 45.0%
! TGCAAACTTCTGGAAGGGAA+AGG + Chr1:99087378-99087397 MsG0180006031.01.T01:CDS 45.0%
! TGGTTTGCATCAATGGGATG+GGG + Chr1:99084913-99084932 MsG0180006031.01.T01:intron 45.0%
! TGTGGTTTGCATCAATGGGA+TGG + Chr1:99084911-99084930 MsG0180006031.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr1:99087624-99087643 None:intergenic 45.0%
! TTCTGGAAGGGAAAGGCAAA+TGG + Chr1:99087385-99087404 MsG0180006031.01.T01:CDS 45.0%
!! ACCAGATGGCTTTGACAAGT+TGG - Chr1:99088323-99088342 None:intergenic 45.0%
!! AGGTGACTCTGCTTTTCCTA+GGG + Chr1:99086040-99086059 MsG0180006031.01.T01:intron 45.0%
!! GGCACTGAGGTACTAGATTT+TGG + Chr1:99084987-99085006 MsG0180006031.01.T01:intron 45.0%
!! TAGGTGACTCTGCTTTTCCT+AGG + Chr1:99086039-99086058 MsG0180006031.01.T01:intron 45.0%
!! TTTGAAGTTGGTAGGAGCGA+GGG - Chr1:99088498-99088517 None:intergenic 45.0%
!!! CCAAGTTTTAACTTCCGCGA+AGG - Chr1:99088415-99088434 None:intergenic 45.0%
AAACAGGGGGATGCTTGACA+AGG - Chr1:99088590-99088609 None:intergenic 50.0%
AACAGGGGGATGCTTGACAA+GGG - Chr1:99088589-99088608 None:intergenic 50.0%
ACTAAAGCTCCCGCATACAC+AGG - Chr1:99087701-99087720 None:intergenic 50.0%
AGATACAAGGGACGATGCCA+AGG + Chr1:99086780-99086799 MsG0180006031.01.T01:CDS 50.0%
AGCCATTAGGATCGGTCTAG+AGG - Chr1:99089099-99089118 None:intergenic 50.0%
AGGATCGGTCTAGAGGTTAG+AGG - Chr1:99089092-99089111 None:intergenic 50.0%
AGGGAAAGGCAAATGGAGAG+GGG + Chr1:99087392-99087411 MsG0180006031.01.T01:CDS 50.0%
CAAAAGAGTGGGCCCAAGAA+AGG + Chr1:99086105-99086124 MsG0180006031.01.T01:CDS 50.0%
CAAGGCCCGTATACAACATG+AGG - Chr1:99084858-99084877 None:intergenic 50.0%
CAGTCTTTCGACTCTTCGGA+AGG - Chr1:99086194-99086213 None:intergenic 50.0%
CCATGTGGCTAACCTTATCC+AGG + Chr1:99088160-99088179 MsG0180006031.01.T01:three_prime_UTR 50.0%
CTAAAGCTCCCGCATACACA+GGG - Chr1:99087700-99087719 None:intergenic 50.0%
GAAGGGAAAGGCAAATGGAG+AGG + Chr1:99087390-99087409 MsG0180006031.01.T01:CDS 50.0%
GACAGAACACCGTGCTTCTT+TGG - Chr1:99086326-99086345 None:intergenic 50.0%
GACAGTCGTGATCAGTAGGT+TGG - Chr1:99084473-99084492 None:intergenic 50.0%
GCAGCTTGGAAACTGGAATC+TGG + Chr1:99086064-99086083 MsG0180006031.01.T01:CDS 50.0%
GGTTTGCATCAATGGGATGG+GGG + Chr1:99084914-99084933 MsG0180006031.01.T01:intron 50.0%
GTACAACAACCTTCCCAGAG+TGG + Chr1:99085496-99085515 MsG0180006031.01.T01:CDS 50.0%
GTCACGTGACTGAAAGGTCA+CGG + Chr1:99087590-99087609 MsG0180006031.01.T01:three_prime_UTR 50.0%
TCACGTGACTGAAAGGTCAC+GGG + Chr1:99087591-99087610 MsG0180006031.01.T01:three_prime_UTR 50.0%
TCGGCTAAGAAAACCCCACA+TGG - Chr1:99087235-99087254 None:intergenic 50.0%
TGACAAACACTGCGCAGAGT+TGG + Chr1:99085699-99085718 MsG0180006031.01.T01:CDS 50.0%
TGGAGGGATGATGTCATGCA+CGG + Chr1:99087058-99087077 MsG0180006031.01.T01:CDS 50.0%
TGTGGCTAACCTTATCCAGG+GGG + Chr1:99088163-99088182 MsG0180006031.01.T01:three_prime_UTR 50.0%
TGTTCGTGCAGCATCTATGC+TGG + Chr1:99086346-99086365 MsG0180006031.01.T01:CDS 50.0%
! AGTATACCACCACTCTGGGA+AGG - Chr1:99085508-99085527 None:intergenic 50.0%
! CCTGGATAAGGTTAGCCACA+TGG - Chr1:99088163-99088182 None:intergenic 50.0%
! GGGCGGTTTTACACAAAGTC+TGG + Chr1:99087412-99087431 MsG0180006031.01.T01:CDS 50.0%
! GTCAAAAAAGCATGAGCCGG+AGG + Chr1:99086232-99086251 MsG0180006031.01.T01:CDS 50.0%
!! CAAAATGGTGGATCCCTTCC+CGG + Chr1:99087673-99087692 MsG0180006031.01.T01:three_prime_UTR 50.0%
!! GAGGTGTCGAGATAAATGGC+AGG + Chr1:99088116-99088135 MsG0180006031.01.T01:three_prime_UTR 50.0%
!! GTTTGAAGTTGGTAGGAGCG+AGG - Chr1:99088499-99088518 None:intergenic 50.0%
AAGGCCTCACACCAACAGGA+AGG - Chr1:99086175-99086194 None:intergenic 55.0%
AAGGTCACGGGATCAAGTCC+TGG + Chr1:99087603-99087622 MsG0180006031.01.T01:three_prime_UTR 55.0%
CAACAACCTTCCCAGAGTGG+TGG + Chr1:99085499-99085518 MsG0180006031.01.T01:CDS 55.0%
CAGTTTCCAAGCTGCTCCCT+AGG - Chr1:99086059-99086078 None:intergenic 55.0%
CTAGGGAGCAGCTTGGAAAC+TGG + Chr1:99086057-99086076 MsG0180006031.01.T01:CDS 55.0%
GAAAGGCAAATGGAGAGGGG+CGG + Chr1:99087395-99087414 MsG0180006031.01.T01:CDS 55.0%
GGATGATGTCATGCACGGCA+AGG + Chr1:99087063-99087082 MsG0180006031.01.T01:CDS 55.0%
GGTCTAGAGGTTAGAGGCTG+AGG - Chr1:99089086-99089105 None:intergenic 55.0%
TACAAGGGACGATGCCAAGG+TGG + Chr1:99086783-99086802 MsG0180006031.01.T01:CDS 55.0%
TCCACCTTCCTGTTGGTGTG+AGG + Chr1:99086168-99086187 MsG0180006031.01.T01:CDS 55.0%
TCTGGGCCCTGGATTTGAAG+TGG + Chr1:99086082-99086101 MsG0180006031.01.T01:CDS 55.0%
TGAGGGGAGCCTTGATGCAA+TGG + Chr1:99087557-99087576 MsG0180006031.01.T01:three_prime_UTR 55.0%
! AAAAAGCATGAGCCGGAGGC+AGG + Chr1:99086236-99086255 MsG0180006031.01.T01:CDS 55.0%
! AGTAGGTTGGGCTCGACATC+AGG - Chr1:99084460-99084479 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+TGG + Chr1:99087705-99087724 MsG0180006031.01.T01:three_prime_UTR 55.0%
! CGGGAAGGGATCCACCATTT+TGG - Chr1:99087675-99087694 None:intergenic 55.0%
! GCTTTTCCTAGGGAGCAGCT+TGG + Chr1:99086050-99086069 MsG0180006031.01.T01:CDS 55.0%
! GGGCGTCTTGTTCTTGGAGA+TGG + Chr1:99086947-99086966 MsG0180006031.01.T01:CDS 55.0%
! TGCGGGAGCTTTAGTGCACT+GGG + Chr1:99087706-99087725 MsG0180006031.01.T01:three_prime_UTR 55.0%
! TTCAAAGACGGATGGCGGCA+TGG + Chr1:99087454-99087473 MsG0180006031.01.T01:CDS 55.0%
!! AACCAGGGGCGTCTTGTTCT+TGG + Chr1:99086941-99086960 MsG0180006031.01.T01:intron 55.0%
ACTGCTTCCACACCTGCCTC+CGG - Chr1:99086251-99086270 None:intergenic 60.0%
AGCGGCAAGAGATCAGGTCC+AGG + Chr1:99086995-99087014 MsG0180006031.01.T01:CDS 60.0%
AGGTGGTCTGCCTGAAGGGA+AGG + Chr1:99086800-99086819 MsG0180006031.01.T01:CDS 60.0%
CTCCAAGAACAAGACGCCCC+TGG - Chr1:99086946-99086965 None:intergenic 60.0%
CTTCCCGGACCCTGTGTATG+CGG + Chr1:99087688-99087707 MsG0180006031.01.T01:three_prime_UTR 60.0%
GCATACACAGGGTCCGGGAA+GGG - Chr1:99087689-99087708 None:intergenic 60.0%
GCCAAGGTGGTCTGCCTGAA+GGG + Chr1:99086796-99086815 MsG0180006031.01.T01:CDS 60.0%
GCCTCACACCAACAGGAAGG+TGG - Chr1:99086172-99086191 None:intergenic 60.0%
GGAAACTGGAATCTGGGCCC+TGG + Chr1:99086071-99086090 MsG0180006031.01.T01:CDS 60.0%
GGCAGGTGTGGAAGCAGTGA+TGG + Chr1:99086253-99086272 MsG0180006031.01.T01:CDS 60.0%
TCCCTTCAGGCAGACCACCT+TGG - Chr1:99086800-99086819 None:intergenic 60.0%
TCGGAAGGCCTCACACCAAC+AGG - Chr1:99086179-99086198 None:intergenic 60.0%
TGCCAAGGTGGTCTGCCTGA+AGG + Chr1:99086795-99086814 MsG0180006031.01.T01:CDS 60.0%
TGGCACAGCGGCAAGAGATC+AGG + Chr1:99086989-99087008 MsG0180006031.01.T01:CDS 60.0%
TTCCCGGACCCTGTGTATGC+GGG + Chr1:99087689-99087708 MsG0180006031.01.T01:three_prime_UTR 60.0%
! TCTTGATGGCAGTCGCTGCC+TGG - Chr1:99088240-99088259 None:intergenic 60.0%
CGCATACACAGGGTCCGGGA+AGG - Chr1:99087690-99087709 None:intergenic 65.0%
CTCCCGCATACACAGGGTCC+GGG - Chr1:99087694-99087713 None:intergenic 65.0%
GCTCCCGCATACACAGGGTC+CGG - Chr1:99087695-99087714 None:intergenic 65.0%
GCATGAGCCGGAGGCAGGTG+TGG + Chr1:99086241-99086260 MsG0180006031.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 99084265 99089200 99084265 ID=MsG0180006031.01;Name=MsG0180006031.01
Chr1 mRNA 99084265 99089200 99084265 ID=MsG0180006031.01.T01;Parent=MsG0180006031.01;Name=MsG0180006031.01.T01;_AED=0.32;_eAED=0.33;_QI=0|0.42|0.37|1|0.42|0.25|8|1687|494
Chr1 exon 99084265 99084503 99084265 ID=MsG0180006031.01.T01:exon:19784;Parent=MsG0180006031.01.T01
Chr1 exon 99085462 99085764 99085462 ID=MsG0180006031.01.T01:exon:19785;Parent=MsG0180006031.01.T01
Chr1 exon 99085859 99085932 99085859 ID=MsG0180006031.01.T01:exon:19786;Parent=MsG0180006031.01.T01
Chr1 exon 99086042 99086367 99086042 ID=MsG0180006031.01.T01:exon:19787;Parent=MsG0180006031.01.T01
Chr1 exon 99086485 99086548 99086485 ID=MsG0180006031.01.T01:exon:19788;Parent=MsG0180006031.01.T01
Chr1 exon 99086679 99086821 99086679 ID=MsG0180006031.01.T01:exon:19789;Parent=MsG0180006031.01.T01
Chr1 exon 99086947 99087111 99086947 ID=MsG0180006031.01.T01:exon:19790;Parent=MsG0180006031.01.T01
Chr1 exon 99087343 99089200 99087343 ID=MsG0180006031.01.T01:exon:19791;Parent=MsG0180006031.01.T01
Chr1 CDS 99084265 99084503 99084265 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99085462 99085764 99085462 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99085859 99085932 99085859 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99086042 99086367 99086042 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99086485 99086548 99086485 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99086679 99086821 99086679 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99086947 99087111 99086947 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 CDS 99087343 99087513 99087343 ID=MsG0180006031.01.T01:cds;Parent=MsG0180006031.01.T01
Chr1 three_prime_UTR 99087514 99089200 99087514 ID=MsG0180006031.01.T01:three_prime_utr;Parent=MsG0180006031.01.T01
Gene Sequence

>MsG0180006031.01.T01

CTGATTCTCATTCCTTCTCTTCCATTGTATAAAATTATAATTGCCATGTTTTTTCAGGATCCAAATAGTGCAGTCATATGCATTATTGCGTGTTCTGAGCCCATCAATGATAGTGATATAGCAGTCTTTCTGCGTATTTTCCGTCAAACAACAGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTCGAGCCCAACCTACTGATCACGACTGTCCTTACACTTAGGTTTCCCTCTTCATATGATTATAGCAGCTCAACCGTACAACAACCTTCCCAGAGTGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCTTGTTTTTGGCTTTTGGGGAAAACATAGTCAGCAACAAACTGTCTCTGGGAAAGAGGATGCAGTATCTTCTCATGAAACAATGAGATCTTATAACGTTGATAAGGGGGAAAATAGGATTGCTCCCAGTATTATAGATGACAGATTTGACAAACACTGCGCAGAGTTGGAGCCAAACACAAGCAATAACGGCTCAAAGTTGTCTGCTTCAAGGGATTCTGAAAAAAATGAAGATTTATTTGACACCTCTAATTGTCCTATCCCTTATGAATCCGTTAATGAAGAAGGTGACTCTGCTTTTCCTAGGGAGCAGCTTGGAAACTGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAAGGGAAGCTGATGATACACCAATGGTGGATAACCTAAGCATATTCCACCTTCCTGTTGGTGTGAGGCCTTCCGAAGAGTCGAAAGACTGTTTAGAAATCTCATTTATGTCAAAAAAGCATGAGCCGGAGGCAGGTGTGGAAGCAGTGATGGAATTTACATCTTCATTTTTGAAGGCAAAACACGGTAATAGTAACAAACCAAAGAAGCACGGTGTTCTGTCTGTTCGTGCAGCATCTATGCTGAAACGCATGAATTCTGTAGCTGACAATGTAAATGACACAGTTCTTTATACTAAGAATAAAGGAAGTGGTAAGAATTTTTTAGGTTTGACTTTATATTTACAGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTGGAGATGGAAATATCTATGATGGTTTATGGCACAGCGGCAAGAGATCAGGTCCAGGAACATTCTATTTCAAGAATGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGTTTGTACCGTTTTAAATTTAACTCTGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGACGGATGGCGGCATGGCCAGTTTTTTTGTGTGAATGCAAATGGAGAGAGGTAA

Protein sequence

>MsG0180006031.01.T01

LILIPSLPLYKIIIAMFFQDPNSAVICIIACSEPINDSDIAVFLRIFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLRFPSSYDYSSSTVQQPSQSGGILSKLALHFPLVFGFWGKHSQQQTVSGKEDAVSSHETMRSYNVDKGENRIAPSIIDDRFDKHCAELEPNTSNNGSKLSASRDSEKNEDLFDTSNCPIPYESVNEEGDSAFPREQLGNWNLGPGFEVAKEWAQEREADDTPMVDNLSIFHLPVGVRPSEESKDCLEISFMSKKHEPEAGVEAVMEFTSSFLKAKHGNSNKPKKHGVLSVRAASMLKRMNSVADNVNDTVLYTKNKGSGKNFLGLTLYLQEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLGDGNIYDGLWHSGKRSGPGTFYFKNGDMFQGSWRDDVMHGKVCTVLNLTLGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFFCVNANGER*