AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001610.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001610.01.T01 MTR_1g039990 96.500 400 12 1 90 489 1 398 0.0 786
MsG0180001610.01.T01 MTR_0804s0020 83.871 62 8 1 90 151 1 60 6.23e-25 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001610.01.T01 AT3G28760 66.146 384 117 2 107 488 71 443 0.0 522
MsG0180001610.01.T01 AT3G28760 66.146 384 117 2 107 488 49 421 0.0 522
MsG0180001610.01.T01 AT5G08540 50.000 84 34 1 16 91 263 346 6.26e-18 85.5

Find 106 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTAGTGAGAAGGATATTT+TGG 0.180793 1:+24068790 MsG0180001610.01.T01:CDS
AAGACTTGGTCTGATATATT+TGG 0.266344 1:-24072968 None:intergenic
TTTGGATGCACAAAATAAAA+AGG 0.273689 1:+24068808 MsG0180001610.01.T01:CDS
GGCAAAAGATGCTTCACTTT+AGG 0.292968 1:+24073058 MsG0180001610.01.T01:three_prime_UTR
AATCAAAGAAAGTGTGGATA+TGG 0.301157 1:+24067529 MsG0180001610.01.T01:CDS
TGTCCTCTTAAAACATGAAT+TGG 0.310213 1:-24065014 None:intergenic
CACGCCTACATTGCTGTTCC+AGG 0.323371 1:+24070802 MsG0180001610.01.T01:CDS
CATTGCTTTCTTCTGTTCTT+CGG 0.350670 1:-24070078 None:intergenic
AGTGATTGTGGTTGATCAAC+AGG 0.351036 1:+24070867 MsG0180001610.01.T01:CDS
TTCTTCTTCTTGGACACCAT+TGG 0.354356 1:+24067488 MsG0180001610.01.T01:CDS
ATGTCTTTACTGTCGCAAAT+TGG 0.354779 1:+24067384 MsG0180001610.01.T01:CDS
TTCCTCAACTTGCCAATGAT+TGG 0.356737 1:+24067622 MsG0180001610.01.T01:CDS
TTAGTTGTCAAGGAAATCTT+CGG 0.373589 1:+24065560 MsG0180001610.01.T01:CDS
AGATGGCAAATACAGTCTTT+TGG 0.378386 1:-24069773 None:intergenic
TGAGCCTATTCTTGAGCTTA+AGG 0.383726 1:+24069973 MsG0180001610.01.T01:CDS
ATGTATGTAAACAGATATAA+TGG 0.383937 1:+24073098 MsG0180001610.01.T01:three_prime_UTR
CAAATTCAAGTTGCTGGAAT+GGG 0.397178 1:+24070130 MsG0180001610.01.T01:CDS
GCACTTGAACATGGCTTAGA+TGG 0.408508 1:+24069926 MsG0180001610.01.T01:CDS
TGGACACCATTGGAGGATAC+TGG 0.409798 1:+24067498 MsG0180001610.01.T01:CDS
AATTTGTGTCACAGTGGCTT+TGG 0.410779 1:-24070113 None:intergenic
GTGACACAAATTCAAGTTGC+TGG 0.412213 1:+24070124 MsG0180001610.01.T01:CDS
CCATCTTCTCAAGCGAATCT+AGG 0.413021 1:-24065967 None:intergenic
TTTGCCTCCACAAGGATTAG+TGG 0.415111 1:-24070937 None:intergenic
TAGTTGTCAAGGAAATCTTC+GGG 0.415832 1:+24065561 MsG0180001610.01.T01:CDS
TTTATAGTTGAGAAATGAAA+AGG 0.416485 1:+24072813 MsG0180001610.01.T01:exon
TTGTAGTTAATTTACTTGAT+TGG 0.425623 1:+24068906 MsG0180001610.01.T01:CDS
CCTAGATTCGCTTGAGAAGA+TGG 0.435482 1:+24065967 MsG0180001610.01.T01:CDS
CAAGGAGGGGCTCGACATAC+TGG 0.436961 1:+24072774 MsG0180001610.01.T01:CDS
ATCTTCATGGTCACCTCTAC+AGG 0.444721 1:-24065047 None:intergenic
AGTTAATTTACTTGATTGGC+AGG 0.445134 1:+24068910 MsG0180001610.01.T01:CDS
CGGCAAAGAATTGCAATTGT+TGG 0.452724 1:+24070892 MsG0180001610.01.T01:CDS
ACAAATTGAATTACCTTGTA+CGG 0.452777 1:-24072623 None:intergenic
TCTTGTTCATTCAGAATGCT+TGG 0.454670 1:+24070308 MsG0180001610.01.T01:CDS
AAACGTGTGTTGGAAGTAGA+AGG 0.460018 1:-24067429 None:intergenic
CTCAAGAAATGTCTGAGCTT+CGG 0.461769 1:-24069808 None:intergenic
CCAGTGACATCACTAAAAGT+TGG 0.464939 1:+24072729 MsG0180001610.01.T01:CDS
TACCTGTCAGAATTAAAATC+AGG 0.467479 1:+24070838 MsG0180001610.01.T01:CDS
CAAGTTGAGGAAGGTGAGAT+GGG 0.470330 1:-24067611 None:intergenic
GTCCTCTTAAAACATGAATT+GGG 0.472712 1:-24065013 None:intergenic
TAAAATACATGACCAATCAT+TGG 0.473391 1:-24067634 None:intergenic
GAAGATTTCCTTGACAACTA+AGG 0.473890 1:-24065558 None:intergenic
ACAGCAATGTAGGCGTGAAC+TGG 0.479131 1:-24070796 None:intergenic
GCAAGTTGAGGAAGGTGAGA+TGG 0.481357 1:-24067612 None:intergenic
TTCTTCTTGGACACCATTGG+AGG 0.485849 1:+24067491 MsG0180001610.01.T01:CDS
GCTTTAGTTTGTCCCGTACA+AGG 0.485966 1:+24072610 MsG0180001610.01.T01:CDS
ACAAATTCAAGTTGCTGGAA+TGG 0.489970 1:+24070129 MsG0180001610.01.T01:CDS
TTGTTACCAGTATCCTCCAA+TGG 0.499727 1:-24067504 None:intergenic
GACGCAGAAGCCACCCGGGT+GGG 0.502597 1:+24064416 MsG0180001610.01.T01:CDS
CAAATTGAATTACCTTGTAC+GGG 0.507264 1:-24072622 None:intergenic
TTTGAGGCGCAAACGTGTGT+TGG 0.510108 1:-24067439 None:intergenic
AGGTAGGATGTTCTACCGCC+TGG 0.514003 1:-24070820 None:intergenic
TAGGTTGGATCCTTTGCTAG+AGG 0.519842 1:+24070279 MsG0180001610.01.T01:intron
ACGCAGAAGCCACCCGGGTG+GGG 0.522339 1:+24064417 MsG0180001610.01.T01:CDS
CTAAGTCGTTCTAGTTCCTC+CGG 0.524065 1:-24068857 None:intergenic
CTCTGCAGTCTTATGAGACC+TGG 0.525874 1:+24070172 MsG0180001610.01.T01:CDS
ACTAATCCTTGTGGAGGCAA+AGG 0.534041 1:+24070939 MsG0180001610.01.T01:CDS
GTAAACAGATATAATGGAGT+TGG 0.537288 1:+24073104 MsG0180001610.01.T01:three_prime_UTR
CTTACCGCATTCACCCGAAA+AGG 0.538390 1:-24070354 None:intergenic
AGATAGCTCCTTAGTTGTCA+AGG 0.541338 1:+24065550 MsG0180001610.01.T01:CDS
TGAATTGTGTAAAGTCCAGT+TGG 0.544052 1:+24073037 MsG0180001610.01.T01:three_prime_UTR
GATCCATAATGGATCAACTA+GGG 0.547651 1:+24064391 None:intergenic
ATCAGGAAAAGAAGTGATTG+TGG 0.556374 1:+24070855 MsG0180001610.01.T01:CDS
AAGAAATAATCCTCTAGCAA+AGG 0.559960 1:-24070289 None:intergenic
TTGTAGAAGAACAAGGTTTG+AGG 0.561848 1:-24067455 None:intergenic
CACAAACCTTTGCCTCCACA+AGG 0.562034 1:-24070945 None:intergenic
ATCACCTTAAGCTCAAGAAT+AGG 0.564561 1:-24069977 None:intergenic
ATACACACAACTTCTGAAGC+TGG 0.564898 1:+24065941 MsG0180001610.01.T01:CDS
GGGGTGACGCAGAAGCCACC+CGG 0.565246 1:+24064411 MsG0180001610.01.T01:CDS
CTGCAGCTGTTGAAAGAGGA+TGG 0.567310 1:+24067574 MsG0180001610.01.T01:CDS
GACCAATCATTGGCAAGTTG+AGG 0.569625 1:-24067624 None:intergenic
TTCGGATGCATTATCAGAGA+TGG 0.570257 1:-24069790 None:intergenic
AAATTCAAGTTGCTGGAATG+GGG 0.571305 1:+24070131 MsG0180001610.01.T01:CDS
GAAGTTCTATTGAGAGTACA+AGG 0.574180 1:+24072756 MsG0180001610.01.T01:CDS
GAAGGCATTGTAGAAGAACA+AGG 0.582626 1:-24067462 None:intergenic
TTCTATTGAGAGTACAAGGA+GGG 0.583807 1:+24072760 MsG0180001610.01.T01:CDS
GTCTACTTTCTATCTTTACA+CGG 0.590915 1:-24070915 None:intergenic
CGAAGCTCAGACATTTCTTG+AGG 0.591185 1:+24069809 MsG0180001610.01.T01:CDS
ATATCATATCTTACCCCACC+CGG 0.603988 1:-24064430 None:intergenic
ATGAAAATAATGCAAAGACT+TGG 0.605754 1:-24072982 None:intergenic
AATCATTGGCAAGTTGAGGA+AGG 0.609879 1:-24067620 None:intergenic
GGATCCATAATGGATCAACT+AGG 0.610707 1:+24064390 None:intergenic
ACCGCCTGGAACAGCAATGT+AGG 0.611914 1:-24070806 None:intergenic
ATGACTGCAGCTGTTGAAAG+AGG 0.614177 1:+24067570 MsG0180001610.01.T01:CDS
TGACGCAGAAGCCACCCGGG+TGG 0.618828 1:+24064415 MsG0180001610.01.T01:CDS
AAGTAGACCACTAATCCTTG+TGG 0.623475 1:+24070930 MsG0180001610.01.T01:CDS
GGGTGACGCAGAAGCCACCC+GGG 0.624380 1:+24064412 MsG0180001610.01.T01:CDS
AATTCAAGTTGCTGGAATGG+GGG 0.626295 1:+24070132 MsG0180001610.01.T01:CDS
GTGTTGGAAGTAGAAGGTGG+TGG 0.630075 1:-24067423 None:intergenic
AAGAGGACAGATGACTGCAA+TGG 0.637867 1:-24068765 None:intergenic
TTGTGGTTGATCAACAGGGT+CGG 0.642420 1:+24070872 MsG0180001610.01.T01:CDS
AGTCTTATGAGACCTGGTGA+AGG 0.644139 1:+24070178 MsG0180001610.01.T01:CDS
CATACGAGAAGTCCTTCACC+AGG 0.653315 1:-24070190 None:intergenic
TATCATATCTTACCCCACCC+GGG 0.654623 1:-24064429 None:intergenic
TCTATTGAGAGTACAAGGAG+GGG 0.656158 1:+24072761 MsG0180001610.01.T01:CDS
GATATGGACAAAGAACAAGC+AGG 0.656378 1:+24067545 MsG0180001610.01.T01:CDS
ACATGTGCGAAGACCTGTAG+AGG 0.669788 1:+24065034 MsG0180001610.01.T01:CDS
GTGATTGTGGTTGATCAACA+GGG 0.670264 1:+24070868 MsG0180001610.01.T01:CDS
TAGACCACTAATCCTTGTGG+AGG 0.673279 1:+24070933 MsG0180001610.01.T01:CDS
GCCTACATTGCTGTTCCAGG+CGG 0.679259 1:+24070805 MsG0180001610.01.T01:CDS
AACTTGAATTTGTGTCACAG+TGG 0.683036 1:-24070119 None:intergenic
ATCCATAATGGATCAACTAG+GGG 0.695373 1:+24064392 None:intergenic
AGTTGTCAAGGAAATCTTCG+GGG 0.716074 1:+24065562 MsG0180001610.01.T01:CDS
CATATCTTACCCCACCCGGG+TGG 0.724919 1:-24064426 None:intergenic
ACTAGAACGACTTAGACCTG+AGG 0.735230 1:+24068865 MsG0180001610.01.T01:CDS
GTTCTATTGAGAGTACAAGG+AGG 0.743766 1:+24072759 MsG0180001610.01.T01:CDS
CGTGTGTTGGAAGTAGAAGG+TGG 0.751214 1:-24067426 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTAAATTATTAATGTAAA+AGG - Chr1:24065378-24065397 None:intergenic 10.0%
!! TGTTAAAATAGTTAAAAATA+TGG - Chr1:24072081-24072100 None:intergenic 10.0%
!!! AAATTTTTGTACTTATAAAA+TGG - Chr1:24067117-24067136 None:intergenic 10.0%
!!! AATAACTCTTATTTTAAAAT+AGG - Chr1:24066750-24066769 None:intergenic 10.0%
!!! ATAACAATTGAATTTAAAAT+GGG - Chr1:24066419-24066438 None:intergenic 10.0%
!!! TATTTAGTCTTTAAAATTTT+AGG + Chr1:24068281-24068300 MsG0180001610.01.T01:intron 10.0%
!!! TTAGTTTTTAAAAATGTTAA+TGG + Chr1:24071762-24071781 MsG0180001610.01.T01:intron 10.0%
!! AAACGATGTAAAAAATTATA+CGG - Chr1:24071894-24071913 None:intergenic 15.0%
!! AATTATCTGAATTTGAAAAT+AGG + Chr1:24072214-24072233 MsG0180001610.01.T01:intron 15.0%
!! ACAACAAATCTATATATTAA+AGG + Chr1:24064674-24064693 MsG0180001610.01.T01:intron 15.0%
!! AGATTAAAATGAAAAACAAA+AGG - Chr1:24068451-24068470 None:intergenic 15.0%
!! ATTAAAATGAAAAACAAAAG+GGG - Chr1:24068449-24068468 None:intergenic 15.0%
!! CATAACAATTGAATTTAAAA+TGG - Chr1:24066420-24066439 None:intergenic 15.0%
!! GATTAAAATGAAAAACAAAA+GGG - Chr1:24068450-24068469 None:intergenic 15.0%
!! TACATTATTGAAATTGAAAA+TGG - Chr1:24069673-24069692 None:intergenic 15.0%
!! TATTATTATGATTGTTTAGA+AGG + Chr1:24064725-24064744 MsG0180001610.01.T01:intron 15.0%
!!! AAATATTTTCCAATAACTAA+TGG - Chr1:24070974-24070993 None:intergenic 15.0%
!!! ATAAAAAAAAGTTTTTCAGA+TGG - Chr1:24064509-24064528 None:intergenic 15.0%
!!! ATTTTAAAATCATCCAATTT+TGG + Chr1:24066934-24066953 MsG0180001610.01.T01:intron 15.0%
!!! ATTTTTTTTGAGAGAAATTT+CGG + Chr1:24064775-24064794 MsG0180001610.01.T01:intron 15.0%
!!! CAAAAAAACAAATTCTAAAA+AGG - Chr1:24071025-24071044 None:intergenic 15.0%
!!! CAATTGGATTTAAAATATAA+TGG - Chr1:24067684-24067703 None:intergenic 15.0%
!!! CTTTTGCTTATATTTTATAA+TGG - Chr1:24071429-24071448 None:intergenic 15.0%
!!! GATTTAAAATATAATGGAAA+GGG - Chr1:24067678-24067697 None:intergenic 15.0%
!!! TAACAATTGAATTTAAAATG+GGG - Chr1:24066418-24066437 None:intergenic 15.0%
!!! TCTGAAAAACTTTTTTTTAT+AGG + Chr1:24064509-24064528 MsG0180001610.01.T01:intron 15.0%
!!! TGTTTCCTTATATTTTTTTT+AGG + Chr1:24065419-24065438 MsG0180001610.01.T01:intron 15.0%
!!! TTATATTTTTTTTAGGCAAA+AGG + Chr1:24065426-24065445 MsG0180001610.01.T01:intron 15.0%
!!! TTTTATGATATTTGGAATTT+TGG + Chr1:24068726-24068745 MsG0180001610.01.T01:intron 15.0%
!!! TTTTGCCTAAAAAAAATATA+AGG - Chr1:24065427-24065446 None:intergenic 15.0%
!!! TTTTTTTTTTTCCATTGATT+TGG - Chr1:24072196-24072215 None:intergenic 15.0%
!! AAACAAGGAAAACTAATATA+AGG - Chr1:24069167-24069186 None:intergenic 20.0%
!! AAATAATGAATTCAAAACCA+TGG + Chr1:24072159-24072178 MsG0180001610.01.T01:intron 20.0%
!! AAATGGAAACAAATAACAAA+AGG - Chr1:24067724-24067743 None:intergenic 20.0%
!! AAATTAACCAAATACTTAAG+TGG + Chr1:24068327-24068346 MsG0180001610.01.T01:intron 20.0%
!! AATAATGAATTCAAAACCAT+GGG + Chr1:24072160-24072179 MsG0180001610.01.T01:intron 20.0%
!! AATGGAAACAAATAACAAAA+GGG - Chr1:24067723-24067742 None:intergenic 20.0%
!! AGCTTATCTATTTAGATAAT+AGG + Chr1:24064480-24064499 MsG0180001610.01.T01:intron 20.0%
!! AGGTATATAAATATTAGTAG+GGG + Chr1:24069829-24069848 MsG0180001610.01.T01:intron 20.0%
!! ATCTTGAGATACAATTAATA+AGG - Chr1:24071297-24071316 None:intergenic 20.0%
!! ATGTATGTAAACAGATATAA+TGG + Chr1:24073098-24073117 MsG0180001610.01.T01:three_prime_UTR 20.0%
!! ATTATAAATAATGAGACAGA+GGG - Chr1:24071230-24071249 None:intergenic 20.0%
!! ATTTAAATCCAAATAGTTCT+TGG - Chr1:24065151-24065170 None:intergenic 20.0%
!! GAGGTATATAAATATTAGTA+GGG + Chr1:24069828-24069847 MsG0180001610.01.T01:intron 20.0%
!! TAATGTGATACTAAAACAAT+TGG - Chr1:24067700-24067719 None:intergenic 20.0%
!! TATTATAAATAATGAGACAG+AGG - Chr1:24071231-24071250 None:intergenic 20.0%
!! TCTTGAGATACAATTAATAA+GGG - Chr1:24071296-24071315 None:intergenic 20.0%
!! TGAGGTATATAAATATTAGT+AGG + Chr1:24069827-24069846 MsG0180001610.01.T01:intron 20.0%
!! TTGTAGTTAATTTACTTGAT+TGG + Chr1:24068906-24068925 MsG0180001610.01.T01:CDS 20.0%
!! TTTATAGTTGAGAAATGAAA+AGG + Chr1:24072813-24072832 MsG0180001610.01.T01:exon 20.0%
!!! AACTCTTATTTTAAAATAGG+AGG - Chr1:24066747-24066766 None:intergenic 20.0%
!!! ACTTTTATTTTAATGAACTC+CGG - Chr1:24068647-24068666 None:intergenic 20.0%
!!! ATTGTTTTACTTCCATATTT+TGG - Chr1:24066146-24066165 None:intergenic 20.0%
!!! ATTTGAACCATATTTTTATG+TGG - Chr1:24065126-24065145 None:intergenic 20.0%
!!! GATGATTTTAAAATGAGAAA+TGG - Chr1:24066928-24066947 None:intergenic 20.0%
!!! GGATTTAAAATATAATGGAA+AGG - Chr1:24067679-24067698 None:intergenic 20.0%
!!! GTTTTTTCTTCATTTCTTTA+TGG + Chr1:24066184-24066203 MsG0180001610.01.T01:intron 20.0%
!!! TGTTGATAAAAAAGTTCAAA+TGG - Chr1:24065825-24065844 None:intergenic 20.0%
!!! TTAATTTGTTGATACATGAT+TGG + Chr1:24068547-24068566 MsG0180001610.01.T01:intron 20.0%
! AAACAGTAAGATGAATAGTT+AGG - Chr1:24071321-24071340 None:intergenic 25.0%
! AACAAGGAAATATGGATTTA+TGG - Chr1:24072049-24072068 None:intergenic 25.0%
! AACAGTCAAAAACTTTCTTT+AGG + Chr1:24070260-24070279 MsG0180001610.01.T01:intron 25.0%
! AAGATGAATGTTTGATGTTA+TGG + Chr1:24070711-24070730 MsG0180001610.01.T01:intron 25.0%
! AATTGTTAGCGATAGTTATA+GGG + Chr1:24065095-24065114 MsG0180001610.01.T01:intron 25.0%
! ACAAAAAATCAAAGAAAGTG+TGG + Chr1:24067523-24067542 MsG0180001610.01.T01:CDS 25.0%
! ACAAATTGAATTACCTTGTA+CGG - Chr1:24072626-24072645 None:intergenic 25.0%
! ACTTTCAGTTTAAATCTTTC+AGG + Chr1:24070045-24070064 MsG0180001610.01.T01:intron 25.0%
! AGATTTAAACTGAAAGTAAG+AGG - Chr1:24070042-24070061 None:intergenic 25.0%
! AGGAAATAAACCGTTAAAAA+CGG + Chr1:24072701-24072720 MsG0180001610.01.T01:intron 25.0%
! ATAATGAATTCAAAACCATG+GGG + Chr1:24072161-24072180 MsG0180001610.01.T01:intron 25.0%
! ATACAAAACATGATTCATGA+TGG - Chr1:24066965-24066984 None:intergenic 25.0%
! ATGAAAATAATGCAAAGACT+TGG - Chr1:24072985-24073004 None:intergenic 25.0%
! ATTGAAGTCTTCAATTACAT+TGG + Chr1:24068358-24068377 MsG0180001610.01.T01:intron 25.0%
! ATTTAACTCTGAATTTCATC+AGG - Chr1:24072281-24072300 None:intergenic 25.0%
! GAATTTGAACAAATCACTAT+TGG + Chr1:24071177-24071196 MsG0180001610.01.T01:intron 25.0%
! GATTTATGGTGTAAAAAACA+CGG - Chr1:24072035-24072054 None:intergenic 25.0%
! GGAGTTCATTAAAATAAAAG+TGG + Chr1:24068646-24068665 MsG0180001610.01.T01:intron 25.0%
! GGTGAAATTTAAACACAAAA+TGG - Chr1:24067741-24067760 None:intergenic 25.0%
! TAAAATACATGACCAATCAT+TGG - Chr1:24067637-24067656 None:intergenic 25.0%
! TAAAGACAACTAGAAATAGA+TGG - Chr1:24072424-24072443 None:intergenic 25.0%
! TAATTAGTGGAAAAGATGAT+TGG + Chr1:24071858-24071877 MsG0180001610.01.T01:intron 25.0%
! TCAAACAAAATTGATGTACT+TGG - Chr1:24071491-24071510 None:intergenic 25.0%
! TCTTGTAATTTCTTTAGTGT+TGG - Chr1:24067054-24067073 None:intergenic 25.0%
! TGTAAAAAACACGGAAATAT+GGG - Chr1:24072026-24072045 None:intergenic 25.0%
! TTCTCACTTACTTAAGAAAT+TGG + Chr1:24066720-24066739 MsG0180001610.01.T01:intron 25.0%
! TTTAACTCTGAATTTCATCA+GGG - Chr1:24072280-24072299 None:intergenic 25.0%
! TTTATAGGATATCTACAGTT+AGG + Chr1:24064524-24064543 MsG0180001610.01.T01:intron 25.0%
! TTTGGATGCACAAAATAAAA+AGG + Chr1:24068808-24068827 MsG0180001610.01.T01:CDS 25.0%
! TTTGTGTATCCATTAGTTAT+TGG + Chr1:24070962-24070981 MsG0180001610.01.T01:intron 25.0%
!! AAATAGAGTTTGAGTTATGT+TGG + Chr1:24068606-24068625 MsG0180001610.01.T01:intron 25.0%
!! AATCATCTTTTCCACTAATT+AGG - Chr1:24071859-24071878 None:intergenic 25.0%
!! AATTTAAAATGGGGAGAAAA+TGG - Chr1:24066409-24066428 None:intergenic 25.0%
!! CATTCATAAGGAAGATATTT+TGG + Chr1:24068505-24068524 MsG0180001610.01.T01:intron 25.0%
!! CTTTTGCTTATGTTTTGTAA+TGG + Chr1:24071515-24071534 MsG0180001610.01.T01:intron 25.0%
!! GATGTACTTGGTTTAAAATT+TGG - Chr1:24071479-24071498 None:intergenic 25.0%
!! TATTACTACCAATTTTCTGA+GGG + Chr1:24069560-24069579 MsG0180001610.01.T01:intron 25.0%
!! TGGAAATGTTTTTCACATTT+AGG + Chr1:24068567-24068586 MsG0180001610.01.T01:intron 25.0%
!! TTAGCAATATTTTCATAGTG+TGG + Chr1:24072441-24072460 MsG0180001610.01.T01:intron 25.0%
!! TTATTACTACCAATTTTCTG+AGG + Chr1:24069559-24069578 MsG0180001610.01.T01:intron 25.0%
!! TTTTGAATTCAAAAAGGTTG+GGG + Chr1:24066053-24066072 MsG0180001610.01.T01:intron 25.0%
!!! AAGTTTTTGACTGTTAAGAA+TGG - Chr1:24070255-24070274 None:intergenic 25.0%
!!! ACCTTACAAATTGGTTTTTT+AGG + Chr1:24064990-24065009 MsG0180001610.01.T01:intron 25.0%
!!! AGACTGTTTTGAATTCAAAA+AGG + Chr1:24066047-24066066 MsG0180001610.01.T01:intron 25.0%
!!! AGTCTTTAAAATTTTAGGAG+AGG + Chr1:24068286-24068305 MsG0180001610.01.T01:intron 25.0%
!!! ATAGATTTGTTGTCTATGAA+AGG - Chr1:24064667-24064686 None:intergenic 25.0%
!!! ATATTGATTCAGCAAAAACA+AGG - Chr1:24069182-24069201 None:intergenic 25.0%
!!! ATGAAATTTTTTAGTTGCTG+TGG - Chr1:24072125-24072144 None:intergenic 25.0%
!!! CATTTTGGTATAGTTATAGA+AGG + Chr1:24066340-24066359 MsG0180001610.01.T01:intron 25.0%
!!! GTTGTTGCAATGTTTATTTT+GGG + Chr1:24065256-24065275 MsG0180001610.01.T01:intron 25.0%
!!! GTTTTGAATTCAAAAAGGTT+GGG + Chr1:24066052-24066071 MsG0180001610.01.T01:intron 25.0%
!!! TAGAGTGGTTTATGATTTTT+TGG + Chr1:24072914-24072933 MsG0180001610.01.T01:intron 25.0%
!!! TGTTTTGAATTCAAAAAGGT+TGG + Chr1:24066051-24066070 MsG0180001610.01.T01:intron 25.0%
!!! TTACTGTTTTTGTCAAATAG+CGG + Chr1:24071332-24071351 MsG0180001610.01.T01:intron 25.0%
!!! TTGTTGCAATGTTTATTTTG+GGG + Chr1:24065257-24065276 MsG0180001610.01.T01:intron 25.0%
!!! TTTGAGCAATTTTCAAGTAT+CGG + Chr1:24069286-24069305 MsG0180001610.01.T01:intron 25.0%
AAAAACCAATTTGTAAGGTG+AGG - Chr1:24064989-24065008 None:intergenic 30.0%
AAAAGACAGGTAATATGAGA+GGG + Chr1:24071727-24071746 MsG0180001610.01.T01:intron 30.0%
AAAGGATACTTAGTATGAGA+CGG - Chr1:24071007-24071026 None:intergenic 30.0%
AACGGTTTATTTCCTGAATA+GGG - Chr1:24072696-24072715 None:intergenic 30.0%
AAGAAATAATCCTCTAGCAA+AGG - Chr1:24070292-24070311 None:intergenic 30.0%
AATACTCAAGAAGCTTCAAA+TGG - Chr1:24070010-24070029 None:intergenic 30.0%
ACAAATTTGATCCAATGTCT+TGG + Chr1:24068477-24068496 MsG0180001610.01.T01:intron 30.0%
ACCAGTTACTTGTAATAACA+GGG + Chr1:24070772-24070791 MsG0180001610.01.T01:intron 30.0%
ACTACACATGTCATATCTAT+AGG - Chr1:24067941-24067960 None:intergenic 30.0%
ACTTTCTACTTGAAGAAATG+TGG + Chr1:24069599-24069618 MsG0180001610.01.T01:intron 30.0%
AGATGTAAGAGAACTTGAAA+TGG + Chr1:24072372-24072391 MsG0180001610.01.T01:intron 30.0%
AGTTAATTTACTTGATTGGC+AGG + Chr1:24068910-24068929 MsG0180001610.01.T01:CDS 30.0%
ATCATCTCGAATCCAAAATA+TGG + Chr1:24066131-24066150 MsG0180001610.01.T01:intron 30.0%
ATGATGCTAGAGTGAAAATA+AGG - Chr1:24071949-24071968 None:intergenic 30.0%
ATGTATTTAGGAACAATGGA+AGG + Chr1:24066588-24066607 MsG0180001610.01.T01:intron 30.0%
ATGTGGTTGTTTATATTTGC+TGG + Chr1:24069616-24069635 MsG0180001610.01.T01:intron 30.0%
ATTACAAGTAACTGGTGAAA+AGG - Chr1:24070768-24070787 None:intergenic 30.0%
ATTCATCATAGAGTTTCTCT+TGG - Chr1:24070745-24070764 None:intergenic 30.0%
ATTGTGTTTGCATTTGCAAA+TGG + Chr1:24067762-24067781 MsG0180001610.01.T01:intron 30.0%
ATTTCTATGACAACTATCCA+AGG - Chr1:24068232-24068251 None:intergenic 30.0%
ATTTGCAAATGCAAACACAA+TGG - Chr1:24067763-24067782 None:intergenic 30.0%
CAAATTGAATTACCTTGTAC+GGG - Chr1:24072625-24072644 None:intergenic 30.0%
CAATTGTTAGCGATAGTTAT+AGG + Chr1:24065094-24065113 MsG0180001610.01.T01:intron 30.0%
CACTTAAAAGGTAAAGGTTA+TGG + Chr1:24065234-24065253 MsG0180001610.01.T01:intron 30.0%
CTTAAGTAAGTGAGAATAGA+GGG - Chr1:24066716-24066735 None:intergenic 30.0%
GAGTTTGTAAGTGTAATACA+TGG - Chr1:24072308-24072327 None:intergenic 30.0%
GCCTAAAAAACCAATTTGTA+AGG - Chr1:24064994-24065013 None:intergenic 30.0%
GTCAAAAACTTTCTTTAGGT+TGG + Chr1:24070264-24070283 MsG0180001610.01.T01:intron 30.0%
GTCCTCTTAAAACATGAATT+GGG - Chr1:24065016-24065035 None:intergenic 30.0%
GTCTACTTTCTATCTTTACA+CGG - Chr1:24070918-24070937 None:intergenic 30.0%
GTGTAAAAAACACGGAAATA+TGG - Chr1:24072027-24072046 None:intergenic 30.0%
TAAAAGACAGGTAATATGAG+AGG + Chr1:24071726-24071745 MsG0180001610.01.T01:intron 30.0%
TAACAAAGTAGTTAGTGACA+AGG - Chr1:24071623-24071642 None:intergenic 30.0%
TAACGGTTTATTTCCTGAAT+AGG - Chr1:24072697-24072716 None:intergenic 30.0%
TAAGGCAGAATTTCCATAAT+AGG - Chr1:24064807-24064826 None:intergenic 30.0%
TAATGAATTCAAAACCATGG+GGG + Chr1:24072162-24072181 MsG0180001610.01.T01:intron 30.0%
TAATGATCAAAGTTCGTCAT+TGG + Chr1:24066540-24066559 MsG0180001610.01.T01:intron 30.0%
TACCTGTCAGAATTAAAATC+AGG + Chr1:24070838-24070857 MsG0180001610.01.T01:CDS 30.0%
TATGGGTGCAGTTAAAAATA+TGG - Chr1:24072009-24072028 None:intergenic 30.0%
TCAAATCACCAAGAACTATT+TGG + Chr1:24065140-24065159 MsG0180001610.01.T01:intron 30.0%
TCACAAACCACTTAAGTATT+TGG - Chr1:24068337-24068356 None:intergenic 30.0%
TCTTAAGTAAGTGAGAATAG+AGG - Chr1:24066717-24066736 None:intergenic 30.0%
TGAAAATTCAGCTTTCATTG+TGG + Chr1:24068123-24068142 MsG0180001610.01.T01:intron 30.0%
TGACATGTATTTAGGAACAA+TGG + Chr1:24066584-24066603 MsG0180001610.01.T01:intron 30.0%
TGATGAACTAATAACGTTGT+TGG + Chr1:24067318-24067337 MsG0180001610.01.T01:intron 30.0%
TGTCCTCTTAAAACATGAAT+TGG - Chr1:24065017-24065036 None:intergenic 30.0%
TGTGGTTGTTTATATTTGCT+GGG + Chr1:24069617-24069636 MsG0180001610.01.T01:intron 30.0%
TTAACTCAACCATACAAAAC+CGG - Chr1:24067998-24068017 None:intergenic 30.0%
TTACTTTCTCTCTATTGCTT+TGG - Chr1:24066841-24066860 None:intergenic 30.0%
TTAGTTGTCAAGGAAATCTT+CGG + Chr1:24065560-24065579 MsG0180001610.01.T01:CDS 30.0%
TTCATGCTAGTTAAATTGAC+TGG + Chr1:24065629-24065648 MsG0180001610.01.T01:intron 30.0%
TTGTAAGTGTAATACATGGT+GGG - Chr1:24072304-24072323 None:intergenic 30.0%
TTTCTATGACAACTATCCAA+GGG - Chr1:24068231-24068250 None:intergenic 30.0%
TTTGCAAATGCAAACACAAT+GGG - Chr1:24067762-24067781 None:intergenic 30.0%
TTTGTAAGTGTAATACATGG+TGG - Chr1:24072305-24072324 None:intergenic 30.0%
! AAGACTTGGTCTGATATATT+TGG - Chr1:24072971-24072990 None:intergenic 30.0%
! AATCAAAGAAAGTGTGGATA+TGG + Chr1:24067529-24067548 MsG0180001610.01.T01:CDS 30.0%
! CATAACCTTTACCTTTTAAG+TGG - Chr1:24065236-24065255 None:intergenic 30.0%
! CTCGTATGTATTCATTTTGA+TGG + Chr1:24070205-24070224 MsG0180001610.01.T01:intron 30.0%
! CTTTAAGAAACTTCAAAGAG+AGG - Chr1:24065712-24065731 None:intergenic 30.0%
! GGTTGTTGCAATGTTTATTT+TGG + Chr1:24065255-24065274 MsG0180001610.01.T01:intron 30.0%
! GTAAACAGATATAATGGAGT+TGG + Chr1:24073104-24073123 MsG0180001610.01.T01:three_prime_UTR 30.0%
! TATTAAAGGATGAGCTTTGT+AGG + Chr1:24064688-24064707 MsG0180001610.01.T01:intron 30.0%
! TGGCATATCACTTTAAGAAT+AGG + Chr1:24066381-24066400 MsG0180001610.01.T01:intron 30.0%
! TGTTTCTTATGTGTTCTAGA+AGG - Chr1:24071060-24071079 None:intergenic 30.0%
! TTGCAACCTTTGAATTTTGT+AGG + Chr1:24069904-24069923 MsG0180001610.01.T01:intron 30.0%
! TTGCTTATGTTTTGTAATGG+AGG + Chr1:24071518-24071537 MsG0180001610.01.T01:intron 30.0%
!! ATATTTTGGATTCGAGATGA+TGG - Chr1:24066132-24066151 None:intergenic 30.0%
!! ATTTGTTGTCTATGAAAGGA+TGG - Chr1:24064663-24064682 None:intergenic 30.0%
!! CAATGGTGAGTTGATTAATT+AGG - Chr1:24071128-24071147 None:intergenic 30.0%
!! GCTATTTTCATAAGCTATCT+TGG - Chr1:24070536-24070555 None:intergenic 30.0%
!! GTCAAAGAAAGTTGATGTAT+TGG + Chr1:24071452-24071471 MsG0180001610.01.T01:intron 30.0%
!! GTTTAGGACATTCTTTTCTA+TGG + Chr1:24066657-24066676 MsG0180001610.01.T01:intron 30.0%
!! TGCTTATGTTTTGTAATGGA+GGG + Chr1:24071519-24071538 MsG0180001610.01.T01:intron 30.0%
!! TTAACCAAACTAGTCTTTCA+TGG + Chr1:24070650-24070669 MsG0180001610.01.T01:intron 30.0%
!! TTGGTGATTTTGAATTTTGC+CGG + Chr1:24068625-24068644 MsG0180001610.01.T01:intron 30.0%
!! TTTTGAAGGTAGGAACATAA+GGG - Chr1:24071817-24071836 None:intergenic 30.0%
!! TTTTTGAAGGTAGGAACATA+AGG - Chr1:24071818-24071837 None:intergenic 30.0%
!!! CATCTTATTTTGTTTGTCAG+CGG - Chr1:24067367-24067386 None:intergenic 30.0%
!!! CTTTAAAATTTTAGGAGAGG+AGG + Chr1:24068289-24068308 MsG0180001610.01.T01:intron 30.0%
!!! GTTTATGATTTTTTGGCTAG+AGG + Chr1:24072921-24072940 MsG0180001610.01.T01:three_prime_UTR 30.0%
!!! TAAGGAAGTTTGGTTTTTGA+AGG - Chr1:24071831-24071850 None:intergenic 30.0%
!!! TGATTTTAATTCTGACAGGT+AGG - Chr1:24070839-24070858 None:intergenic 30.0%
!!! TTCCTGATTTTAATTCTGAC+AGG - Chr1:24070843-24070862 None:intergenic 30.0%
AACTTGAATTTGTGTCACAG+TGG - Chr1:24070122-24070141 None:intergenic 35.0%
AAGCTATCTTGGAGACTTTA+TGG - Chr1:24070525-24070544 None:intergenic 35.0%
AATATGGATCGCAGAAAACA+AGG - Chr1:24072065-24072084 None:intergenic 35.0%
AATGAATTCAAAACCATGGG+GGG + Chr1:24072163-24072182 MsG0180001610.01.T01:intron 35.0%
ACATCAATGCTGTTAAAGAC+TGG - Chr1:24066281-24066300 None:intergenic 35.0%
ACTCAAATTTCGCAATTAGG+AGG - Chr1:24067851-24067870 None:intergenic 35.0%
AGATTCAGAAGATTCTAGTG+AGG + Chr1:24066000-24066019 MsG0180001610.01.T01:intron 35.0%
AGGAACATAAGGGTTAGATA+AGG - Chr1:24071807-24071826 None:intergenic 35.0%
AGTGTCTCATATAGTCCTTA+CGG + Chr1:24068984-24069003 MsG0180001610.01.T01:intron 35.0%
ATCACCTTAAGCTCAAGAAT+AGG - Chr1:24069980-24069999 None:intergenic 35.0%
ATCAGGAAAAGAAGTGATTG+TGG + Chr1:24070855-24070874 MsG0180001610.01.T01:CDS 35.0%
ATGTCTTTACTGTCGCAAAT+TGG + Chr1:24067384-24067403 MsG0180001610.01.T01:CDS 35.0%
ATTCAAAGGTTGCAACTGTA+AGG - Chr1:24069899-24069918 None:intergenic 35.0%
CAAAAAATCACACTTCGTTC+TGG + Chr1:24065287-24065306 MsG0180001610.01.T01:intron 35.0%
CAAAACATGATTCATGATGG+AGG - Chr1:24066962-24066981 None:intergenic 35.0%
CAAACAATCTTCTCATGACT+TGG + Chr1:24066087-24066106 MsG0180001610.01.T01:intron 35.0%
CAAGTGCCTACAAAATTCAA+AGG - Chr1:24069913-24069932 None:intergenic 35.0%
CACCAGTTACTTGTAATAAC+AGG + Chr1:24070771-24070790 MsG0180001610.01.T01:intron 35.0%
CATCAAACATTCATCTTCCA+AGG - Chr1:24070708-24070727 None:intergenic 35.0%
CATTAGCTAGTCCTTAAAGA+TGG - Chr1:24069349-24069368 None:intergenic 35.0%
CATTGCTTTCTTCTGTTCTT+CGG - Chr1:24070081-24070100 None:intergenic 35.0%
CCACAAGACGAAATACAATT+GGG + Chr1:24064748-24064767 MsG0180001610.01.T01:intron 35.0%
CGTTAGACATGATTCGTAAT+AGG + Chr1:24065176-24065195 MsG0180001610.01.T01:intron 35.0%
GAACTAATAACGTTGTTGGT+TGG + Chr1:24067322-24067341 MsG0180001610.01.T01:intron 35.0%
GAAGATTTCCTTGACAACTA+AGG - Chr1:24065561-24065580 None:intergenic 35.0%
GATGACTTACTCTATTGTGA+TGG + Chr1:24071971-24071990 MsG0180001610.01.T01:intron 35.0%
GCAACTCAAATTTCGCAATT+AGG - Chr1:24067854-24067873 None:intergenic 35.0%
GCACTGCTATTGAAAAACAA+TGG - Chr1:24071145-24071164 None:intergenic 35.0%
GGAACATAAGGGTTAGATAA+GGG - Chr1:24071806-24071825 None:intergenic 35.0%
GGATATTATGTGTGTTCGTT+TGG + Chr1:24066361-24066380 MsG0180001610.01.T01:intron 35.0%
GGATCGACCACATAAAAATA+TGG + Chr1:24065116-24065135 MsG0180001610.01.T01:intron 35.0%
GGTAAGATATGATATCTTGC+AGG + Chr1:24064438-24064457 MsG0180001610.01.T01:intron 35.0%
GTAAGAGAACTTGAAATGGA+TGG + Chr1:24072376-24072395 MsG0180001610.01.T01:intron 35.0%
GTCAACTGTGACATGTATTT+AGG + Chr1:24066576-24066595 MsG0180001610.01.T01:intron 35.0%
GTCTTGGAATGACATTCATA+AGG + Chr1:24068493-24068512 MsG0180001610.01.T01:intron 35.0%
GTGTAGTGTTTGTAAAGCTT+GGG + Chr1:24067954-24067973 MsG0180001610.01.T01:intron 35.0%
TAGTTGTCAAGGAAATCTTC+GGG + Chr1:24065561-24065580 MsG0180001610.01.T01:CDS 35.0%
TATCTTATCCACCATCTTCA+TGG - Chr1:24065063-24065082 None:intergenic 35.0%
TCAATCGCAGAAAATAGTAG+CGG - Chr1:24071598-24071617 None:intergenic 35.0%
TCCACTAATTAGGAGTGATA+AGG - Chr1:24071849-24071868 None:intergenic 35.0%
TCCCTGTTATTACAAGTAAC+TGG - Chr1:24070776-24070795 None:intergenic 35.0%
TCCTTATCACTCCTAATTAG+TGG + Chr1:24071845-24071864 MsG0180001610.01.T01:intron 35.0%
TCGCAGAAAACAAGGAAATA+TGG - Chr1:24072057-24072076 None:intergenic 35.0%
TCTTGTTCATTCAGAATGCT+TGG + Chr1:24070308-24070327 MsG0180001610.01.T01:CDS 35.0%
TGAATGTCATTCCAAGACAT+TGG - Chr1:24068491-24068510 None:intergenic 35.0%
TGAATTGTGTAAAGTCCAGT+TGG + Chr1:24073037-24073056 MsG0180001610.01.T01:three_prime_UTR 35.0%
TGGAAATTCTGCTTTCATTG+CGG + Chr1:24067814-24067833 MsG0180001610.01.T01:intron 35.0%
TGTACTAACGAGCAACAAAA+GGG - Chr1:24071387-24071406 None:intergenic 35.0%
TGTCGAAACGTCAAAAATTG+TGG - Chr1:24068837-24068856 None:intergenic 35.0%
TGTGCAGAATCTTAAAAGAC+AGG + Chr1:24071714-24071733 MsG0180001610.01.T01:intron 35.0%
TGTGTAGTGTTTGTAAAGCT+TGG + Chr1:24067953-24067972 MsG0180001610.01.T01:intron 35.0%
TGTTTGCATTTGCAAATGGT+TGG + Chr1:24067766-24067785 MsG0180001610.01.T01:intron 35.0%
TTAGGAGTGATAAGGAAGTT+TGG - Chr1:24071841-24071860 None:intergenic 35.0%
TTCAAACGACTTTCAAGCAT+TGG - Chr1:24069014-24069033 None:intergenic 35.0%
TTCTATGACAACTATCCAAG+GGG - Chr1:24068230-24068249 None:intergenic 35.0%
TTGTACTAACGAGCAACAAA+AGG - Chr1:24071388-24071407 None:intergenic 35.0%
TTGTAGAAGAACAAGGTTTG+AGG - Chr1:24067458-24067477 None:intergenic 35.0%
TTTAAGTGGCATGAGCTATA+TGG - Chr1:24065222-24065241 None:intergenic 35.0%
TTTGGCGATAGTAAAATGCT+TGG + Chr1:24068523-24068542 MsG0180001610.01.T01:intron 35.0%
! AATTTTTGACGTTTCGACAC+CGG + Chr1:24068838-24068857 MsG0180001610.01.T01:CDS 35.0%
! AGATGGCAAATACAGTCTTT+TGG - Chr1:24069776-24069795 None:intergenic 35.0%
! ATTTTGTAGGCACTTGAACA+TGG + Chr1:24069917-24069936 MsG0180001610.01.T01:intron 35.0%
! CATGTATTTCTACGTAGTGT+TGG + Chr1:24067794-24067813 MsG0180001610.01.T01:intron 35.0%
! CTATCTTTTGAACAGAACTC+TGG - Chr1:24065536-24065555 None:intergenic 35.0%
! GAAGTTCTATTGAGAGTACA+AGG + Chr1:24072756-24072775 MsG0180001610.01.T01:CDS 35.0%
! GCAGCAATTATATTTTCTGC+AGG - Chr1:24069741-24069760 None:intergenic 35.0%
! GTGGTTGTTTATATTTGCTG+GGG + Chr1:24069618-24069637 MsG0180001610.01.T01:intron 35.0%
! TATAGCTCATGCCACTTAAA+AGG + Chr1:24065222-24065241 MsG0180001610.01.T01:intron 35.0%
! TCATGCCACTTAAAAGGTAA+AGG + Chr1:24065228-24065247 MsG0180001610.01.T01:intron 35.0%
! TCGAGCATTGTCTTGATATA+TGG + Chr1:24064926-24064945 MsG0180001610.01.T01:intron 35.0%
! TCTAAAATGATATCAGAGCC+TGG + Chr1:24068031-24068050 MsG0180001610.01.T01:intron 35.0%
! TGCTAGTGAGAAGGATATTT+TGG + Chr1:24068790-24068809 MsG0180001610.01.T01:CDS 35.0%
! TTCTATTGAGAGTACAAGGA+GGG + Chr1:24072760-24072779 MsG0180001610.01.T01:CDS 35.0%
! TTGAAGCTTCTTGAGTATTG+AGG + Chr1:24070011-24070030 MsG0180001610.01.T01:intron 35.0%
!! AAATTCAAGTTGCTGGAATG+GGG + Chr1:24070131-24070150 MsG0180001610.01.T01:CDS 35.0%
!! AACAACCATTTTTGTTGACG+TGG + Chr1:24066772-24066791 MsG0180001610.01.T01:intron 35.0%
!! AAGAAGCCTTGTTAACTCTT+GGG + Chr1:24065340-24065359 MsG0180001610.01.T01:intron 35.0%
!! AAGTTATTTTCTCACCCGTA+AGG + Chr1:24069207-24069226 MsG0180001610.01.T01:intron 35.0%
!! AATATTAGTAGGGGTGTTAC+AGG + Chr1:24069838-24069857 MsG0180001610.01.T01:intron 35.0%
!! ACAAATTCAAGTTGCTGGAA+TGG + Chr1:24070129-24070148 MsG0180001610.01.T01:CDS 35.0%
!! ACAACCATTTTTGTTGACGT+GGG + Chr1:24066773-24066792 MsG0180001610.01.T01:intron 35.0%
!! ATACAGTCTTTTGGCTGTTT+TGG - Chr1:24069767-24069786 None:intergenic 35.0%
!! ATTTGGAATTTTGGCCATGA+TGG + Chr1:24068735-24068754 MsG0180001610.01.T01:intron 35.0%
!! CAAATTCAAGTTGCTGGAAT+GGG + Chr1:24070130-24070149 MsG0180001610.01.T01:CDS 35.0%
!! CATCTTTAAGGACTAGCTAA+TGG + Chr1:24069347-24069366 MsG0180001610.01.T01:intron 35.0%
!! TAACAGCATTGATGTTACTG+TGG + Chr1:24066286-24066305 MsG0180001610.01.T01:intron 35.0%
!! TCTTTAGTGTTGGTCATTCT+AGG - Chr1:24067044-24067063 None:intergenic 35.0%
!! TGGTGAGTTGATTAATTAGG+TGG - Chr1:24071125-24071144 None:intergenic 35.0%
!! TTTTAGTTGCTGTGGATTGA+TGG - Chr1:24072117-24072136 None:intergenic 35.0%
!!! ACTGGAAAAGCCGTTTTTAA+CGG - Chr1:24072714-24072733 None:intergenic 35.0%
!!! GAAGTTTGGTTTTTGAAGGT+AGG - Chr1:24071827-24071846 None:intergenic 35.0%
!!! TGATTTTTTGGCTAGAGGAA+AGG + Chr1:24072926-24072945 MsG0180001610.01.T01:three_prime_UTR 35.0%
AAAAACCCTGCTCTACACAT+TGG - Chr1:24066170-24066189 None:intergenic 40.0%
AAACGTGTGTTGGAAGTAGA+AGG - Chr1:24067432-24067451 None:intergenic 40.0%
AAAGTTAAGACTCCCCATTG+GGG + Chr1:24066631-24066650 MsG0180001610.01.T01:intron 40.0%
AACCAGTGCAGAGATTATGA+AGG - Chr1:24068185-24068204 None:intergenic 40.0%
AAGGGTTAGATAAGGGATTG+TGG - Chr1:24071799-24071818 None:intergenic 40.0%
AAGTAGACCACTAATCCTTG+TGG + Chr1:24070930-24070949 MsG0180001610.01.T01:CDS 40.0%
AATAGATAAGCTTCCTACGC+TGG - Chr1:24064472-24064491 None:intergenic 40.0%
AATGGATGGACGAAGTAAGA+TGG + Chr1:24072390-24072409 MsG0180001610.01.T01:intron 40.0%
AATTTCGCAATTAGGAGGCT+AGG - Chr1:24067846-24067865 None:intergenic 40.0%
AATTTGTGTCACAGTGGCTT+TGG - Chr1:24070116-24070135 None:intergenic 40.0%
ACAATTCCAATGTGTAGAGC+AGG + Chr1:24066161-24066180 MsG0180001610.01.T01:intron 40.0%
ACCTGATCTAGTGAGTGATA+CGG - Chr1:24064625-24064644 None:intergenic 40.0%
ACTCAAGAAGCTTCAAATGG+AGG - Chr1:24070007-24070026 None:intergenic 40.0%
AGAAAGTTAAGACTCCCCAT+TGG + Chr1:24066629-24066648 MsG0180001610.01.T01:intron 40.0%
AGATAGCTCCTTAGTTGTCA+AGG + Chr1:24065550-24065569 MsG0180001610.01.T01:CDS 40.0%
AGTGATTGTGGTTGATCAAC+AGG + Chr1:24070867-24070886 MsG0180001610.01.T01:CDS 40.0%
AGTGCTTATAAAGCTTGAGC+TGG + Chr1:24064963-24064982 MsG0180001610.01.T01:intron 40.0%
AGTTGTCAAGGAAATCTTCG+GGG + Chr1:24065562-24065581 MsG0180001610.01.T01:CDS 40.0%
AGTTTGAGCCAGAGAATTGA+AGG - Chr1:24070385-24070404 None:intergenic 40.0%
ATAGCAGTGCTATAGTAGAG+CGG + Chr1:24071155-24071174 MsG0180001610.01.T01:intron 40.0%
ATAGCGGCGTTATAAAGTAG+CGG + Chr1:24071348-24071367 MsG0180001610.01.T01:intron 40.0%
ATATCATATCTTACCCCACC+CGG - Chr1:24064433-24064452 None:intergenic 40.0%
ATTTCGCAATTAGGAGGCTA+GGG - Chr1:24067845-24067864 None:intergenic 40.0%
ATTTCGGACAGCACCTATTA+TGG + Chr1:24064791-24064810 MsG0180001610.01.T01:intron 40.0%
CAATTCCAATGTGTAGAGCA+GGG + Chr1:24066162-24066181 MsG0180001610.01.T01:intron 40.0%
CAGAATAATCAACGGATGAC+AGG - Chr1:24069377-24069396 None:intergenic 40.0%
CAGAGTATGCTCTCTATTCT+TGG + Chr1:24065588-24065607 MsG0180001610.01.T01:intron 40.0%
CATGTACCCAAGAGTTAACA+AGG - Chr1:24065349-24065368 None:intergenic 40.0%
CCAGTGACATCACTAAAAGT+TGG + Chr1:24072729-24072748 MsG0180001610.01.T01:CDS 40.0%
CCCAATTGTATTTCGTCTTG+TGG - Chr1:24064751-24064770 None:intergenic 40.0%
CCTTAAAGATGGCAAATGCT+GGG - Chr1:24069338-24069357 None:intergenic 40.0%
CGGCAAAGAATTGCAATTGT+TGG + Chr1:24070892-24070911 MsG0180001610.01.T01:CDS 40.0%
CTCAAGAAATGTCTGAGCTT+CGG - Chr1:24069811-24069830 None:intergenic 40.0%
CTCATCTTCCCTCAGAAAAT+TGG - Chr1:24069571-24069590 None:intergenic 40.0%
CTTAAAGATGGCAAATGCTG+GGG - Chr1:24069337-24069356 None:intergenic 40.0%
CTTCATTGTGTTGGGTGTTA+GGG + Chr1:24064892-24064911 MsG0180001610.01.T01:intron 40.0%
GAAAGGATGGTATGATCCTA+AGG - Chr1:24064650-24064669 None:intergenic 40.0%
GAAAGTTAAGACTCCCCATT+GGG + Chr1:24066630-24066649 MsG0180001610.01.T01:intron 40.0%
GACTTACTCTATTGTGATGG+TGG + Chr1:24071974-24071993 MsG0180001610.01.T01:intron 40.0%
GATACTTAGTATGAGACGGA+TGG - Chr1:24071003-24071022 None:intergenic 40.0%
GATATGGACAAAGAACAAGC+AGG + Chr1:24067545-24067564 MsG0180001610.01.T01:CDS 40.0%
GCCACAAGACGAAATACAAT+TGG + Chr1:24064747-24064766 MsG0180001610.01.T01:intron 40.0%
GGCAAAAGATGCTTCACTTT+AGG + Chr1:24073058-24073077 MsG0180001610.01.T01:three_prime_UTR 40.0%
GTCCAAGAAGAAGAAGAAGA+AGG - Chr1:24067483-24067502 None:intergenic 40.0%
GTGATTGTGGTTGATCAACA+GGG + Chr1:24070868-24070887 MsG0180001610.01.T01:CDS 40.0%
TATCAACTGAGCTAAGCTCA+CGG + Chr1:24067167-24067186 MsG0180001610.01.T01:intron 40.0%
TCACTAGATCAGGTTACCTT+AGG + Chr1:24064631-24064650 MsG0180001610.01.T01:intron 40.0%
TCCAACACCTTCACTATGTT+GGG + Chr1:24067887-24067906 MsG0180001610.01.T01:intron 40.0%
TCCAACACCTTCATTGTGTT+GGG + Chr1:24064884-24064903 MsG0180001610.01.T01:intron 40.0%
TCCTTAAAGATGGCAAATGC+TGG - Chr1:24069339-24069358 None:intergenic 40.0%
TCCTTCTCACTAGCAAAAAG+AGG - Chr1:24068785-24068804 None:intergenic 40.0%
TGAGCCTATTCTTGAGCTTA+AGG + Chr1:24069973-24069992 MsG0180001610.01.T01:CDS 40.0%
TGCATTTGCAAATGGTTGGT+TGG + Chr1:24067770-24067789 MsG0180001610.01.T01:intron 40.0%
TGCCTTCTTCTTCTTCTTCT+TGG + Chr1:24067478-24067497 MsG0180001610.01.T01:CDS 40.0%
TGTTGTCTGTTTCCCTATTC+AGG + Chr1:24072681-24072700 MsG0180001610.01.T01:intron 40.0%
TTAGGAGAGGAGGAACAATT+TGG + Chr1:24068299-24068318 MsG0180001610.01.T01:intron 40.0%
TTCATTGTGTTGGGTGTTAG+GGG + Chr1:24064893-24064912 MsG0180001610.01.T01:intron 40.0%
TTCCTCAACTTGCCAATGAT+TGG + Chr1:24067622-24067641 MsG0180001610.01.T01:CDS 40.0%
TTCGGATGCATTATCAGAGA+TGG - Chr1:24069793-24069812 None:intergenic 40.0%
TTCTTCTTCTTGGACACCAT+TGG + Chr1:24067488-24067507 MsG0180001610.01.T01:CDS 40.0%
TTGTACACAATTGCTCACTC+AGG + Chr1:24069710-24069729 MsG0180001610.01.T01:intron 40.0%
TTGTCCCACGTCAACAAAAA+TGG - Chr1:24066780-24066799 None:intergenic 40.0%
TTGTTACCAGTATCCTCCAA+TGG - Chr1:24067507-24067526 None:intergenic 40.0%
! AATCACACTTCGTTCTGGAT+AGG + Chr1:24065292-24065311 MsG0180001610.01.T01:intron 40.0%
! AATCATTGGCAAGTTGAGGA+AGG - Chr1:24067623-24067642 None:intergenic 40.0%
! ACATTGCAAGCAGACCTTTT+CGG + Chr1:24070340-24070359 MsG0180001610.01.T01:CDS 40.0%
! AGTGCTGTAGAGACACATTT+TGG + Chr1:24066325-24066344 MsG0180001610.01.T01:intron 40.0%
! ATCCAATGGTGGAAGATCTT+CGG + Chr1:24064550-24064569 MsG0180001610.01.T01:intron 40.0%
! CATGATGGAGGAACCAAAAT+TGG - Chr1:24066950-24066969 None:intergenic 40.0%
! CATTTTCTCTAGTGTCCCAT+AGG + Chr1:24066255-24066274 MsG0180001610.01.T01:intron 40.0%
! CCAACTTTTAGTGATGTCAC+TGG - Chr1:24072732-24072751 None:intergenic 40.0%
! GTTCTATTGAGAGTACAAGG+AGG + Chr1:24072759-24072778 MsG0180001610.01.T01:CDS 40.0%
! TCCTCTTTTTGCTAGTGAGA+AGG + Chr1:24068781-24068800 MsG0180001610.01.T01:CDS 40.0%
! TCTATTGAGAGTACAAGGAG+GGG + Chr1:24072761-24072780 MsG0180001610.01.T01:CDS 40.0%
! TGAGCCATGAAAGACTAGTT+TGG - Chr1:24070657-24070676 None:intergenic 40.0%
! TGAGCTTAGCTCAGTTGATA+GGG - Chr1:24067167-24067186 None:intergenic 40.0%
!! AATTCAAGTTGCTGGAATGG+GGG + Chr1:24070132-24070151 MsG0180001610.01.T01:CDS 40.0%
!! AGGTGGATTGAGATACAAGA+AGG - Chr1:24071108-24071127 None:intergenic 40.0%
!! ATACACACAACTTCTGAAGC+TGG + Chr1:24065941-24065960 MsG0180001610.01.T01:CDS 40.0%
!! GAAGAAGCCTTGTTAACTCT+TGG + Chr1:24065339-24065358 MsG0180001610.01.T01:intron 40.0%
!! GAAGGCATTGTAGAAGAACA+AGG - Chr1:24067465-24067484 None:intergenic 40.0%
!! GGCCCAATTCATGTTTTAAG+AGG + Chr1:24065011-24065030 MsG0180001610.01.T01:intron 40.0%
!! GGTGGATTGAGATACAAGAA+GGG - Chr1:24071107-24071126 None:intergenic 40.0%
!! GTGACACAAATTCAAGTTGC+TGG + Chr1:24070124-24070143 MsG0180001610.01.T01:CDS 40.0%
!! TTCCTTGTTATTTGCCGAAC+CGG - Chr1:24069118-24069137 None:intergenic 40.0%
!!! TGGTTCTATCTGCTGGTTTT+AGG + Chr1:24065317-24065336 MsG0180001610.01.T01:intron 40.0%
AACATCAACCCAATCTGTGC+CGG + Chr1:24069096-24069115 MsG0180001610.01.T01:intron 45.0%
AACCACTCTAGCATCAAAGC+TGG - Chr1:24072904-24072923 None:intergenic 45.0%
AAGAGGACAGATGACTGCAA+TGG - Chr1:24068768-24068787 None:intergenic 45.0%
AAGTTGCGCCTTCAATTCTC+TGG + Chr1:24070374-24070393 MsG0180001610.01.T01:intron 45.0%
AATGGAGGGAGTAGCAGTAA+TGG + Chr1:24071533-24071552 MsG0180001610.01.T01:intron 45.0%
ACCCAAACACCATCATTAGG+CGG - Chr1:24064848-24064867 None:intergenic 45.0%
ACTAATCCTTGTGGAGGCAA+AGG + Chr1:24070939-24070958 MsG0180001610.01.T01:CDS 45.0%
ACTAGAACGACTTAGACCTG+AGG + Chr1:24068865-24068884 MsG0180001610.01.T01:CDS 45.0%
ACTTCTGCTTAAAGGTGGTG+AGG + Chr1:24069246-24069265 MsG0180001610.01.T01:intron 45.0%
AGACAGGTAATATGAGAGGG+AGG + Chr1:24071730-24071749 MsG0180001610.01.T01:intron 45.0%
AGCCTAAAGCATGGACAATG+CGG - Chr1:24068076-24068095 None:intergenic 45.0%
AGCCTCCTTATCACGAACAT+CGG + Chr1:24068155-24068174 MsG0180001610.01.T01:intron 45.0%
ATCAACTGAGCTAAGCTCAC+GGG + Chr1:24067168-24067187 MsG0180001610.01.T01:intron 45.0%
ATCTTCATGGTCACCTCTAC+AGG - Chr1:24065050-24065069 None:intergenic 45.0%
ATGACTGCAGCTGTTGAAAG+AGG + Chr1:24067570-24067589 MsG0180001610.01.T01:CDS 45.0%
ATGTCCTAAACTCTCCCCAA+TGG - Chr1:24066648-24066667 None:intergenic 45.0%
CACCTTTAAGCAGAAGTCCA+GGG - Chr1:24069243-24069262 None:intergenic 45.0%
CAGTGCAGAGATTATGAAGG+AGG - Chr1:24068182-24068201 None:intergenic 45.0%
CCATCTTCTCAAGCGAATCT+AGG - Chr1:24065970-24065989 None:intergenic 45.0%
CCCAGCATTTGCCATCTTTA+AGG + Chr1:24069335-24069354 MsG0180001610.01.T01:intron 45.0%
CCTAACACCCAACACAATGA+AGG - Chr1:24064894-24064913 None:intergenic 45.0%
CCTAGATTCGCTTGAGAAGA+TGG + Chr1:24065967-24065986 MsG0180001610.01.T01:CDS 45.0%
CCTGATCTAGTGAGTGATAC+GGG - Chr1:24064624-24064643 None:intergenic 45.0%
CCTTCATTGTGTTGGGTGTT+AGG + Chr1:24064891-24064910 MsG0180001610.01.T01:intron 45.0%
CGAAGCTCAGACATTTCTTG+AGG + Chr1:24069809-24069828 MsG0180001610.01.T01:CDS 45.0%
CGTCATTGGCATGTATGAAG+TGG + Chr1:24066554-24066573 MsG0180001610.01.T01:intron 45.0%
CTACAGTTAGGCTCATCCAA+TGG + Chr1:24064536-24064555 MsG0180001610.01.T01:intron 45.0%
CTCCAACACCTTCACTATGT+TGG + Chr1:24067886-24067905 MsG0180001610.01.T01:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + Chr1:24064883-24064902 MsG0180001610.01.T01:intron 45.0%
CTCCTTCATAATCTCTGCAC+TGG + Chr1:24068180-24068199 MsG0180001610.01.T01:intron 45.0%
CTCTACTCTCTCTACTTCCT+TGG + Chr1:24070688-24070707 MsG0180001610.01.T01:intron 45.0%
GAACCAATGAGCCTAAAGCA+TGG - Chr1:24068085-24068104 None:intergenic 45.0%
GACCAATCATTGGCAAGTTG+AGG - Chr1:24067627-24067646 None:intergenic 45.0%
GCAACCCAAACACCATCATT+AGG - Chr1:24064851-24064870 None:intergenic 45.0%
GCACTTGAACATGGCTTAGA+TGG + Chr1:24069926-24069945 MsG0180001610.01.T01:CDS 45.0%
GGGGACATCTACCAAATCAA+TGG + Chr1:24072182-24072201 MsG0180001610.01.T01:intron 45.0%
GTCTCATATAGTCCTTACGG+TGG + Chr1:24068987-24069006 MsG0180001610.01.T01:intron 45.0%
GTGAGCTTAGCTCAGTTGAT+AGG - Chr1:24067168-24067187 None:intergenic 45.0%
TAGACCACTAATCCTTGTGG+AGG + Chr1:24070933-24070952 MsG0180001610.01.T01:CDS 45.0%
TAGTGAGGCTTCATGATGCT+TGG + Chr1:24066015-24066034 MsG0180001610.01.T01:intron 45.0%
TATCATATCTTACCCCACCC+GGG - Chr1:24064432-24064451 None:intergenic 45.0%
TCATTGTGTTGGGTGTTAGG+GGG + Chr1:24064894-24064913 MsG0180001610.01.T01:intron 45.0%
TGCGTACTTCAGCTTTCTCT+TGG + Chr1:24066214-24066233 MsG0180001610.01.T01:intron 45.0%
TGTAGAGGTGACCATGAAGA+TGG + Chr1:24065049-24065068 MsG0180001610.01.T01:intron 45.0%
TGTCCTAAACTCTCCCCAAT+GGG - Chr1:24066647-24066666 None:intergenic 45.0%
TTCGTGATAAGGAGGCTAGA+GGG - Chr1:24068152-24068171 None:intergenic 45.0%
TTCTTCTTGGACACCATTGG+AGG + Chr1:24067491-24067510 MsG0180001610.01.T01:CDS 45.0%
TTGTGGTTGATCAACAGGGT+CGG + Chr1:24070872-24070891 MsG0180001610.01.T01:CDS 45.0%
TTTCGCAATTAGGAGGCTAG+GGG - Chr1:24067844-24067863 None:intergenic 45.0%
TTTGCCTCCACAAGGATTAG+TGG - Chr1:24070940-24070959 None:intergenic 45.0%
! ACCCAACACAATGAAGGTGT+TGG - Chr1:24064888-24064907 None:intergenic 45.0%
! AGGATGAGCTTTGTAGGAGT+TGG + Chr1:24064694-24064713 MsG0180001610.01.T01:intron 45.0%
! AGTCTTATGAGACCTGGTGA+AGG + Chr1:24070178-24070197 MsG0180001610.01.T01:CDS 45.0%
! ATAAGCTTCCTACGCTGGTT+TGG - Chr1:24064467-24064486 None:intergenic 45.0%
! ATAGGAGTGGTTCTATCTGC+TGG + Chr1:24065310-24065329 MsG0180001610.01.T01:intron 45.0%
! CAAGTTGAGGAAGGTGAGAT+GGG - Chr1:24067614-24067633 None:intergenic 45.0%
! CATTGCAAGCAGACCTTTTC+GGG + Chr1:24070341-24070360 MsG0180001610.01.T01:CDS 45.0%
! GGATGAGCTTTGTAGGAGTT+GGG + Chr1:24064695-24064714 MsG0180001610.01.T01:intron 45.0%
! TAGGTTGGATCCTTTGCTAG+AGG + Chr1:24070279-24070298 MsG0180001610.01.T01:intron 45.0%
! TGTCCATGCTTTAGGCTCAT+TGG + Chr1:24068079-24068098 MsG0180001610.01.T01:intron 45.0%
! TTTTCTCACCCGTAAGGATG+TGG + Chr1:24069213-24069232 MsG0180001610.01.T01:intron 45.0%
! TTTTCTGCTTGCTCATCCTC+AGG - Chr1:24068884-24068903 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - Chr1:24064885-24064904 None:intergenic 45.0%
!! CAACATAGTGAAGGTGTTGG+AGG - Chr1:24067888-24067907 None:intergenic 45.0%
!! CCATACAAAACCGGCTTGTA+TGG - Chr1:24067989-24068008 None:intergenic 45.0%
!! CCATACAAGCCGGTTTTGTA+TGG + Chr1:24067986-24068005 MsG0180001610.01.T01:intron 45.0%
!! CTAAGTCGTTCTAGTTCCTC+CGG - Chr1:24068860-24068879 None:intergenic 45.0%
!! CTAGGGGTGGACTGTATTTA+AGG - Chr1:24064825-24064844 None:intergenic 45.0%
!! GCTGTTAAAGACTGGCCTAT+GGG - Chr1:24066273-24066292 None:intergenic 45.0%
!! GCTTTAGTTTGTCCCGTACA+AGG + Chr1:24072610-24072629 MsG0180001610.01.T01:CDS 45.0%
!! GGGTTGATGTTTCAGTTGTG+AGG - Chr1:24069087-24069106 None:intergenic 45.0%
!! GTGAAGCATCTTTTGCCAAC+TGG - Chr1:24073055-24073074 None:intergenic 45.0%
!! TGCTGTTAAAGACTGGCCTA+TGG - Chr1:24066274-24066293 None:intergenic 45.0%
!! TTAGTAGGGGTGTTACAGGT+CGG + Chr1:24069842-24069861 MsG0180001610.01.T01:intron 45.0%
!!! AATTATAATTTTATGATATT+TGG + Chr1:24068718-24068737 MsG0180001610.01.T01:intron 5.0%
!!! TAAAAAAATAATATTTTCTT+TGG - Chr1:24068394-24068413 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTGATAT+AGG - Chr1:24072249-24072268 None:intergenic 5.0%
AACACCATCATTAGGCGGCT+AGG - Chr1:24064843-24064862 None:intergenic 50.0%
ACACCATCATTAGGCGGCTA+GGG - Chr1:24064842-24064861 None:intergenic 50.0%
ACAGCAATGTAGGCGTGAAC+TGG - Chr1:24070799-24070818 None:intergenic 50.0%
ACATGTGCGAAGACCTGTAG+AGG + Chr1:24065034-24065053 MsG0180001610.01.T01:CDS 50.0%
AGAGGTGACCATGAAGATGG+TGG + Chr1:24065052-24065071 MsG0180001610.01.T01:intron 50.0%
AGCCGAAGATCTTCCACCAT+TGG - Chr1:24064555-24064574 None:intergenic 50.0%
ATTTGGTAGATGTCCCCCCA+TGG - Chr1:24072179-24072198 None:intergenic 50.0%
CACAAACCTTTGCCTCCACA+AGG - Chr1:24070948-24070967 None:intergenic 50.0%
CAGTTAGGCTCATCCAATGG+TGG + Chr1:24064539-24064558 MsG0180001610.01.T01:intron 50.0%
CATACGAGAAGTCCTTCACC+AGG - Chr1:24070193-24070212 None:intergenic 50.0%
CCACCTTTAAGCAGAAGTCC+AGG - Chr1:24069244-24069263 None:intergenic 50.0%
CCCGTATCACTCACTAGATC+AGG + Chr1:24064621-24064640 MsG0180001610.01.T01:intron 50.0%
CCTGGACTTCTGCTTAAAGG+TGG + Chr1:24069241-24069260 MsG0180001610.01.T01:intron 50.0%
CGTGTGTTGGAAGTAGAAGG+TGG - Chr1:24067429-24067448 None:intergenic 50.0%
CTGCAGCTGTTGAAAGAGGA+TGG + Chr1:24067574-24067593 MsG0180001610.01.T01:CDS 50.0%
CTGCTTAAAGGTGGTGAGGT+CGG + Chr1:24069250-24069269 MsG0180001610.01.T01:intron 50.0%
CTTACCGCATTCACCCGAAA+AGG - Chr1:24070357-24070376 None:intergenic 50.0%
GACCCTGGACTTCTGCTTAA+AGG + Chr1:24069238-24069257 MsG0180001610.01.T01:intron 50.0%
GACCGATGTTCGTGATAAGG+AGG - Chr1:24068160-24068179 None:intergenic 50.0%
GAGGACCGATGTTCGTGATA+AGG - Chr1:24068163-24068182 None:intergenic 50.0%
GCAATGGCTGTACTCCATCA+TGG - Chr1:24068752-24068771 None:intergenic 50.0%
GCCTAAAGCATGGACAATGC+GGG - Chr1:24068075-24068094 None:intergenic 50.0%
GGTGAGTCACATGTGGTCTA+CGG - Chr1:24069316-24069335 None:intergenic 50.0%
GTCCTAAACTCTCCCCAATG+GGG - Chr1:24066646-24066665 None:intergenic 50.0%
GTGTTGGAAGTAGAAGGTGG+TGG - Chr1:24067426-24067445 None:intergenic 50.0%
GTTCGTGATAAGGAGGCTAG+AGG - Chr1:24068153-24068172 None:intergenic 50.0%
GTTGCTCAGCATCATCACTG+AGG - Chr1:24065916-24065935 None:intergenic 50.0%
TCCCGCATTGTCCATGCTTT+AGG + Chr1:24068071-24068090 MsG0180001610.01.T01:intron 50.0%
TCGTGATAAGGAGGCTAGAG+GGG - Chr1:24068151-24068170 None:intergenic 50.0%
TGACAACTATCCAAGGGGTG+TGG - Chr1:24068225-24068244 None:intergenic 50.0%
TGGACACCATTGGAGGATAC+TGG + Chr1:24067498-24067517 MsG0180001610.01.T01:CDS 50.0%
TTCACTATGTTGGGCGCGAA+GGG + Chr1:24067896-24067915 MsG0180001610.01.T01:intron 50.0%
TTGAACAGAACTCTGGCAGC+TGG - Chr1:24065529-24065548 None:intergenic 50.0%
! AGCCGCCTAATGATGGTGTT+TGG + Chr1:24064843-24064862 MsG0180001610.01.T01:intron 50.0%
! CACTTCGTTCTGGATAGGAG+TGG + Chr1:24065297-24065316 MsG0180001610.01.T01:intron 50.0%
! CTCCAGCTTTGATGCTAGAG+TGG + Chr1:24072899-24072918 MsG0180001610.01.T01:intron 50.0%
! CTCTGCAGTCTTATGAGACC+TGG + Chr1:24070172-24070191 MsG0180001610.01.T01:CDS 50.0%
! GACAACTATCCAAGGGGTGT+GGG - Chr1:24068224-24068243 None:intergenic 50.0%
! GCAAGTTGAGGAAGGTGAGA+TGG - Chr1:24067615-24067634 None:intergenic 50.0%
! GCCCAACATAGTGAAGGTGT+TGG - Chr1:24067891-24067910 None:intergenic 50.0%
! GCCGCCTAATGATGGTGTTT+GGG + Chr1:24064844-24064863 MsG0180001610.01.T01:intron 50.0%
! GCTGGCCTCACCTTACAAAT+TGG + Chr1:24064981-24065000 MsG0180001610.01.T01:intron 50.0%
! GGTGTTGGAGGCTACAATGA+AGG - Chr1:24067876-24067895 None:intergenic 50.0%
! TTTGAGGCGCAAACGTGTGT+TGG - Chr1:24067442-24067461 None:intergenic 50.0%
! TTTTGACGTTTCGACACCGG+AGG + Chr1:24068841-24068860 MsG0180001610.01.T01:CDS 50.0%
!! TCAAGCATTGGTCCACCGTA+AGG - Chr1:24069002-24069021 None:intergenic 50.0%
!! TGCCGGTTCGGCAAATAACA+AGG + Chr1:24069113-24069132 MsG0180001610.01.T01:intron 50.0%
!!! CAGACCTTTTCGGGTGAATG+CGG + Chr1:24070350-24070369 MsG0180001610.01.T01:CDS 50.0%
AATGCGGGATGCCCAACAAG+AGG - Chr1:24068060-24068079 None:intergenic 55.0%
ACCGCCTGGAACAGCAATGT+AGG - Chr1:24070809-24070828 None:intergenic 55.0%
AGGGTCCACCACATCCTTAC+GGG - Chr1:24069224-24069243 None:intergenic 55.0%
AGGTAGGATGTTCTACCGCC+TGG - Chr1:24070823-24070842 None:intergenic 55.0%
ATGCGGGATGCCCAACAAGA+GGG - Chr1:24068059-24068078 None:intergenic 55.0%
ATGCTGGGGTGAGTCACATG+TGG - Chr1:24069323-24069342 None:intergenic 55.0%
CACCATCATTAGGCGGCTAG+GGG - Chr1:24064841-24064860 None:intergenic 55.0%
CAGGGTCCACCACATCCTTA+CGG - Chr1:24069225-24069244 None:intergenic 55.0%
CGTGATAAGGAGGCTAGAGG+GGG - Chr1:24068150-24068169 None:intergenic 55.0%
CTCCCCATTGGGGAGAGTTT+AGG + Chr1:24066641-24066660 MsG0180001610.01.T01:intron 55.0%
CTTCACTATGTTGGGCGCGA+AGG + Chr1:24067895-24067914 MsG0180001610.01.T01:intron 55.0%
CTTCGCGCCCAACATAGTGA+AGG - Chr1:24067897-24067916 None:intergenic 55.0%
CTTTGTAGGAGTTGGGCGAG+AGG + Chr1:24064702-24064721 MsG0180001610.01.T01:intron 55.0%
GAGTCACATGTGGTCTACGG+TGG - Chr1:24069313-24069332 None:intergenic 55.0%
GCAGCTCTCACCATACAAGC+CGG + Chr1:24067976-24067995 MsG0180001610.01.T01:intron 55.0%
GCAGGTAACCAAACCAGCGT+AGG + Chr1:24064456-24064475 MsG0180001610.01.T01:intron 55.0%
TCTCACCCGTAAGGATGTGG+TGG + Chr1:24069216-24069235 MsG0180001610.01.T01:intron 55.0%
TTGCCGAACCGGCACAGATT+GGG - Chr1:24069107-24069126 None:intergenic 55.0%
TTTGCCGAACCGGCACAGAT+TGG - Chr1:24069108-24069127 None:intergenic 55.0%
! CACGCCTACATTGCTGTTCC+AGG + Chr1:24070802-24070821 MsG0180001610.01.T01:CDS 55.0%
! GCCTACATTGCTGTTCCAGG+CGG + Chr1:24070805-24070824 MsG0180001610.01.T01:CDS 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - Chr1:24064873-24064892 None:intergenic 55.0%
!! AGGGGTGTTACAGGTCGGTT+TGG + Chr1:24069847-24069866 MsG0180001610.01.T01:intron 55.0%
!! CAACCCAATCTGTGCCGGTT+CGG + Chr1:24069101-24069120 MsG0180001610.01.T01:intron 55.0%
!! CTCATTGGTTCGAGCGTGAG+GGG + Chr1:24068094-24068113 MsG0180001610.01.T01:intron 55.0%
!! GCTCATTGGTTCGAGCGTGA+GGG + Chr1:24068093-24068112 MsG0180001610.01.T01:intron 55.0%
!! TCATTGGTTCGAGCGTGAGG+GGG + Chr1:24068095-24068114 MsG0180001610.01.T01:intron 55.0%
AGAGCCTGGAGCCCTCTTGT+TGG + Chr1:24068045-24068064 MsG0180001610.01.T01:intron 60.0%
ATGCCCAACAAGAGGGCTCC+AGG - Chr1:24068052-24068071 None:intergenic 60.0%
CAAGGAGGGGCTCGACATAC+TGG + Chr1:24072774-24072793 MsG0180001610.01.T01:CDS 60.0%
CACCCCTAGCCGCCTAATGA+TGG + Chr1:24064836-24064855 MsG0180001610.01.T01:intron 60.0%
CATATCTTACCCCACCCGGG+TGG - Chr1:24064429-24064448 None:intergenic 60.0%
CATCATTAGGCGGCTAGGGG+TGG - Chr1:24064838-24064857 None:intergenic 60.0%
GAGCCTGGAGCCCTCTTGTT+GGG + Chr1:24068046-24068065 MsG0180001610.01.T01:intron 60.0%
! CTATCCAAGGGGTGTGGGTG+TGG - Chr1:24068219-24068238 None:intergenic 60.0%
!! CGTAAGGATGTGGTGGACCC+TGG + Chr1:24069223-24069242 MsG0180001610.01.T01:intron 60.0%
!! GGCTCATTGGTTCGAGCGTG+AGG + Chr1:24068092-24068111 MsG0180001610.01.T01:intron 60.0%
TGAGCCACACCCACACCCCT+TGG + Chr1:24068212-24068231 MsG0180001610.01.T01:intron 65.0%
ACGCAGAAGCCACCCGGGTG+GGG + Chr1:24064417-24064436 MsG0180001610.01.T01:CDS 70.0%
GACGCAGAAGCCACCCGGGT+GGG + Chr1:24064416-24064435 MsG0180001610.01.T01:CDS 70.0%
GGGGTGACGCAGAAGCCACC+CGG + Chr1:24064411-24064430 MsG0180001610.01.T01:CDS 70.0%
GGGTGACGCAGAAGCCACCC+GGG + Chr1:24064412-24064431 MsG0180001610.01.T01:CDS 70.0%
TGACGCAGAAGCCACCCGGG+TGG + Chr1:24064415-24064434 MsG0180001610.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 24064399 24073159 24064399 ID=MsG0180001610.01;Name=MsG0180001610.01
Chr1 mRNA 24064399 24073159 24064399 ID=MsG0180001610.01.T01;Parent=MsG0180001610.01;Name=MsG0180001610.01.T01;_AED=0.46;_eAED=0.49;_QI=0|0.76|0.71|1|0.69|0.71|14|247|489
Chr1 exon 24064399 24064438 24064399 ID=MsG0180001610.01.T01:exon:292;Parent=MsG0180001610.01.T01
Chr1 exon 24065012 24065055 24065012 ID=MsG0180001610.01.T01:exon:293;Parent=MsG0180001610.01.T01
Chr1 exon 24065530 24065591 24065530 ID=MsG0180001610.01.T01:exon:294;Parent=MsG0180001610.01.T01
Chr1 exon 24065919 24066016 24065919 ID=MsG0180001610.01.T01:exon:295;Parent=MsG0180001610.01.T01
Chr1 exon 24067361 24067648 24067361 ID=MsG0180001610.01.T01:exon:296;Parent=MsG0180001610.01.T01
Chr1 exon 24068765 24068931 24068765 ID=MsG0180001610.01.T01:exon:297;Parent=MsG0180001610.01.T01
Chr1 exon 24069732 24069830 24069732 ID=MsG0180001610.01.T01:exon:298;Parent=MsG0180001610.01.T01
Chr1 exon 24069926 24069994 24069926 ID=MsG0180001610.01.T01:exon:299;Parent=MsG0180001610.01.T01
Chr1 exon 24070067 24070207 24070067 ID=MsG0180001610.01.T01:exon:300;Parent=MsG0180001610.01.T01
Chr1 exon 24070282 24070371 24070282 ID=MsG0180001610.01.T01:exon:301;Parent=MsG0180001610.01.T01
Chr1 exon 24070793 24070960 24070793 ID=MsG0180001610.01.T01:exon:302;Parent=MsG0180001610.01.T01
Chr1 exon 24072556 24072631 24072556 ID=MsG0180001610.01.T01:exon:303;Parent=MsG0180001610.01.T01
Chr1 exon 24072703 24072834 24072703 ID=MsG0180001610.01.T01:exon:304;Parent=MsG0180001610.01.T01
Chr1 exon 24072917 24073159 24072917 ID=MsG0180001610.01.T01:exon:305;Parent=MsG0180001610.01.T01
Chr1 CDS 24064399 24064438 24064399 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24065012 24065055 24065012 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24065530 24065591 24065530 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24065919 24066016 24065919 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24067361 24067648 24067361 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24068765 24068931 24068765 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24069732 24069830 24069732 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24069926 24069994 24069926 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24070067 24070207 24070067 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24070282 24070371 24070282 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24070793 24070960 24070793 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24072556 24072631 24072556 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 CDS 24072703 24072830 24072703 ID=MsG0180001610.01.T01:cds;Parent=MsG0180001610.01.T01
Chr1 three_prime_UTR 24072831 24072834 24072831 ID=MsG0180001610.01.T01:three_prime_utr;Parent=MsG0180001610.01.T01
Chr1 three_prime_UTR 24072917 24073159 24072917 ID=MsG0180001610.01.T01:three_prime_utr;Parent=MsG0180001610.01.T01
Gene Sequence

>MsG0180001610.01.T01

ATGGATCAACTAGGGGTGACGCAGAAGCCACCCGGGTGGGGCCCAATTCATGTTTTAAGAGGACATGTGCGAAGACCTGTAGAGCTGCCAGAGTTCTGTTCAAAAGATAGCTCCTTAGTTGTCAAGGAAATCTTCGGGGTTACAGATGATGATGCTGAGCAACTCAGAATACACACAACTTCTGAAGCTGGCAACCTAGATTCGCTTGAGAAGATGGCTGATATGTCAGATTCAGAAGATTCTAACACCGCTGACAAACAAAATAAGATGTCTTTACTGTCGCAAATTGGATTTGCACAATTCACTCCACCACCTTCTACTTCCAACACACGTTTGCGCCTCAAACCTTGTTCTTCTACAATGCCTTCTTCTTCTTCTTCTTGGACACCATTGGAGGATACTGGTAACAAAAAATCAAAGAAAGTGTGGATATGGACAAAGAACAAGCAGGTTATGACTGCAGCTGTTGAAAGAGGATGGAATACTTTCATTTTCCCATCTCACCTTCCTCAACTTGCCAATGATTGGTCATCCATTGCAGTCATCTGTCCTCTTTTTGCTAGTGAGAAGGATATTTTGGATGCACAAAATAAAAAGGTAGCCACAATTTTTGACGTTTCGACACCGGAGGAACTAGAACGACTTAGACCTGAGGATGAGCAAGCAGAAAACATTGTAGTTAATTTACTTGATTGGCAGGTAATTCCTGCAGAAAATATAATTGCTGCATTCCAAAACAGCCAAAAGACTGTATTTGCCATCTCTGATAATGCATCCGAAGCTCAGACATTTCTTGAGGCACTTGAACATGGCTTAGATGGCATAGTTTTGAAAGTAGAAGATGCTGAGCCTATTCTTGAGCTTAAGGAATATTTCGACCGAAGAACAGAAGAAAGCAATGTATTGAATTTGACCAAAGCCACTGTGACACAAATTCAAGTTGCTGGAATGGGGGATCGTGTTTGTGTTGATCTCTGCAGTCTTATGAGACCTGGTGAAGGACTTCTCGTTGGATCCTTTGCTAGAGGATTATTTCTTGTTCATTCAGAATGCTTGGAGTCAAATTACATTGCAAGCAGACCTTTTCGGGTGAATGCGGGACCAGTTCACGCCTACATTGCTGTTCCAGGCGGTAGAACATCCTACCTGTCAGAATTAAAATCAGGAAAAGAAGTGATTGTGGTTGATCAACAGGGTCGGCAAAGAATTGCAATTGTTGGCCGTGTAAAGATAGAAAGTAGACCACTAATCCTTGTGGAGGCAAAGACAGACTCAGACAATCAAATAATCAGCATACTTTTGCAGAATGCAGAAACAGTTGCTTTAGTTTGTCCCGTACAAGGAAATAAACCGTTAAAAACGGCTTTTCCAGTGACATCACTAAAAGTTGGAGATGAAGTTCTATTGAGAGTACAAGGAGGGGCTCGACATACTGGAATAGAGATTCAAGAATTTATAGTTGAGAAATGA

Protein sequence

>MsG0180001610.01.T01

MDQLGVTQKPPGWGPIHVLRGHVRRPVELPEFCSKDSSLVVKEIFGVTDDDAEQLRIHTTSEAGNLDSLEKMADMSDSEDSNTADKQNKMSLLSQIGFAQFTPPPSTSNTRLRLKPCSSTMPSSSSSWTPLEDTGNKKSKKVWIWTKNKQVMTAAVERGWNTFIFPSHLPQLANDWSSIAVICPLFASEKDILDAQNKKVATIFDVSTPEELERLRPEDEQAENIVVNLLDWQVIPAENIIAAFQNSQKTVFAISDNASEAQTFLEALEHGLDGIVLKVEDAEPILELKEYFDRRTEESNVLNLTKATVTQIQVAGMGDRVCVDLCSLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYIAVPGGRTSYLSELKSGKEVIVVDQQGRQRIAIVGRVKIESRPLILVEAKTDSDNQIISILLQNAETVALVCPVQGNKPLKTAFPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK*