Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015209.01.T01 | XP_003600684.1 | 96.047 | 430 | 15 | 1 | 1 | 428 | 10 | 439 | 0 | 831 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015209.01.T01 | Q5PNY6 | 46.747 | 415 | 202 | 8 | 22 | 427 | 28 | 432 | 3.26E-109 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015209.01.T01 | G7J8Q8 | 96.047 | 430 | 15 | 1 | 1 | 428 | 10 | 439 | 0.0 | 831 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000197.01 | MsG0380015209.01 | 0.807600 | 4.669518e-50 | 2.611666e-47 |
| MsG0180001154.01 | MsG0380015209.01 | 0.824943 | 6.136942e-54 | 5.515726e-51 |
| MsG0180001922.01 | MsG0380015209.01 | 0.800862 | 1.181215e-48 | 5.559645e-46 |
| MsG0180003241.01 | MsG0380015209.01 | 0.869026 | 4.213539e-66 | 1.557341e-62 |
| MsG0180005869.01 | MsG0380015209.01 | 0.894214 | 3.043095e-75 | 2.997319e-71 |
| MsG0180005949.01 | MsG0380015209.01 | 0.823219 | 1.558110e-53 | 1.333294e-50 |
| MsG0280010635.01 | MsG0380015209.01 | 0.800117 | 1.674795e-48 | 7.734974e-46 |
| MsG0280011473.01 | MsG0380015209.01 | 0.851394 | 9.131307e-61 | 1.845771e-57 |
| MsG0380014913.01 | MsG0380015209.01 | 0.834904 | 2.288603e-56 | 2.754048e-53 |
| MsG0380015209.01 | MsG0380015488.01 | 0.874782 | 5.158535e-68 | 2.352039e-64 |
| MsG0380015209.01 | MsG0380015686.01 | 0.886204 | 4.191769e-72 | 2.966068e-68 |
| MsG0380015209.01 | MsG0380015687.01 | 0.855937 | 4.510736e-62 | 1.058897e-58 |
| MsG0380015209.01 | MsG0380017158.01 | 0.825749 | 3.955593e-54 | 3.637683e-51 |
| MsG0380015209.01 | MsG0380017604.01 | 0.809509 | 1.827363e-50 | 1.074904e-47 |
| MsG0380015209.01 | MsG0480020242.01 | 0.810747 | 9.884426e-51 | 6.007691e-48 |
| MsG0380015209.01 | MsG0480022743.01 | 0.826810 | 2.211022e-54 | 2.095703e-51 |
| MsG0380015209.01 | MsG0480023280.01 | 0.817644 | 2.963711e-52 | 2.170472e-49 |
| MsG0380015209.01 | MsG0480023417.01 | 0.829845 | 4.098048e-55 | 4.245113e-52 |
| MsG0380015209.01 | MsG0480023490.01 | 0.811518 | 6.726536e-51 | 4.172690e-48 |
| MsG0380015209.01 | MsG0480023675.01 | 0.802068 | 6.686048e-49 | 3.244442e-46 |
| MsG0380015209.01 | MsG0480023731.01 | 0.800456 | 1.429094e-48 | 6.657186e-46 |
| MsG0380015209.01 | MsG0580025278.01 | 0.801818 | 7.523063e-49 | 3.627532e-46 |
| MsG0380015209.01 | MsG0580025769.01 | 0.872018 | 4.387956e-67 | 1.807155e-63 |
| MsG0380015209.01 | MsG0580028453.01 | 0.889937 | 1.547781e-73 | 1.274836e-69 |
| MsG0380015209.01 | MsG0580028526.01 | 0.823271 | 1.515524e-53 | 1.298726e-50 |
| MsG0380015209.01 | MsG0580028605.01 | 0.826502 | 2.619275e-54 | 2.460787e-51 |
| MsG0380015209.01 | MsG0580029412.01 | 0.861722 | 8.399498e-64 | 2.398845e-60 |
| MsG0380015209.01 | MsG0680030659.01 | 0.835681 | 1.456502e-56 | 1.794144e-53 |
| MsG0380015209.01 | MsG0680034672.01 | 0.832458 | 9.347418e-56 | 1.045357e-52 |
| MsG0380015209.01 | MsG0680035646.01 | 0.828822 | 7.261726e-55 | 7.298555e-52 |
| MsG0380015209.01 | MsG0780039248.01 | 0.808426 | 3.115014e-50 | 1.780585e-47 |
| MsG0380015209.01 | MsG0780040516.01 | 0.827601 | 1.429373e-54 | 1.386348e-51 |
| MsG0380015209.01 | MsG0780040679.01 | 0.810903 | 9.145833e-51 | 5.582150e-48 |
| MsG0380015209.01 | MsG0780041196.01 | 0.860163 | 2.501698e-63 | 6.775115e-60 |
| MsG0380015209.01 | MsG0780041355.01 | 0.824215 | 9.107508e-54 | 8.015844e-51 |
| MsG0380015209.01 | MsG0880043279.01 | 0.821208 | 4.563110e-53 | 3.688855e-50 |
| MsG0380015209.01 | MsG0880043280.01 | 0.806905 | 6.556005e-50 | 3.601295e-47 |
| MsG0380015209.01 | MsG0880043489.01 | 0.835175 | 1.955716e-56 | 2.372708e-53 |
| MsG0380015209.01 | MsG0880045914.01 | 0.873246 | 1.706091e-67 | 7.352720e-64 |
| MsG0380015209.01 | MsG0880046731.01 | 0.841127 | 5.735108e-58 | 8.345286e-55 |
| MsG0380015209.01 | MsG0880046888.01 | 0.896990 | 2.168503e-76 | 2.401637e-72 |
| MsG0380015209.01 | MsG0880047337.01 | 0.800175 | 1.630423e-48 | 7.540921e-46 |
| MsG0380015209.01 | MsG0880047353.01 | 0.852011 | 6.107668e-61 | 1.258818e-57 |
| MsG0280006728.01 | MsG0380015209.01 | 0.807381 | 5.196490e-50 | 2.890150e-47 |
| MsG0280008220.01 | MsG0380015209.01 | 0.828800 | 7.348061e-55 | 7.380713e-52 |
| MsG0280010299.01 | MsG0380015209.01 | 0.860842 | 1.557863e-63 | 4.317886e-60 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015209.01.T01 | MTR_3g065080 | 96.047 | 430 | 15 | 1 | 1 | 428 | 10 | 439 | 0.0 | 831 |
| MsG0380015209.01.T01 | MTR_5g077510 | 65.197 | 431 | 144 | 5 | 1 | 427 | 11 | 439 | 0.0 | 536 |
| MsG0380015209.01.T01 | MTR_6g071340 | 48.449 | 419 | 198 | 7 | 22 | 427 | 2 | 415 | 2.35e-125 | 369 |
| MsG0380015209.01.T01 | MTR_5g048050 | 48.210 | 419 | 199 | 7 | 22 | 427 | 22 | 435 | 1.69e-123 | 365 |
| MsG0380015209.01.T01 | MTR_7g106340 | 35.461 | 423 | 246 | 10 | 21 | 425 | 4 | 417 | 2.07e-61 | 205 |
| MsG0380015209.01.T01 | MTR_1g056880 | 34.389 | 442 | 242 | 11 | 21 | 425 | 3 | 433 | 2.77e-59 | 200 |
| MsG0380015209.01.T01 | MTR_1g056870 | 33.634 | 443 | 244 | 11 | 21 | 425 | 3 | 433 | 3.39e-59 | 199 |
| MsG0380015209.01.T01 | MTR_2g087350 | 35.238 | 420 | 240 | 11 | 20 | 425 | 1 | 402 | 6.42e-59 | 198 |
| MsG0380015209.01.T01 | MTR_4g085720 | 32.039 | 412 | 250 | 10 | 23 | 423 | 12 | 404 | 1.44e-57 | 194 |
| MsG0380015209.01.T01 | MTR_1g056840 | 32.880 | 441 | 224 | 13 | 21 | 425 | 3 | 407 | 1.76e-51 | 179 |
| MsG0380015209.01.T01 | MTR_1g056910 | 32.000 | 400 | 244 | 13 | 20 | 405 | 1 | 386 | 8.96e-47 | 166 |
| MsG0380015209.01.T01 | MTR_4g051515 | 27.791 | 421 | 267 | 14 | 22 | 421 | 3 | 407 | 1.24e-39 | 147 |
| MsG0380015209.01.T01 | MTR_4g063800 | 26.950 | 423 | 258 | 14 | 8 | 415 | 248 | 634 | 3.07e-36 | 141 |
| MsG0380015209.01.T01 | MTR_4g485520 | 25.829 | 422 | 272 | 12 | 4 | 407 | 80 | 478 | 1.98e-34 | 134 |
| MsG0380015209.01.T01 | MTR_4g485520 | 25.829 | 422 | 272 | 12 | 4 | 407 | 248 | 646 | 8.31e-34 | 134 |
| MsG0380015209.01.T01 | MTR_7g059405 | 27.543 | 403 | 240 | 17 | 25 | 408 | 264 | 633 | 1.14e-33 | 133 |
| MsG0380015209.01.T01 | MTR_5g083030 | 28.193 | 415 | 248 | 13 | 23 | 408 | 291 | 684 | 1.61e-33 | 133 |
| MsG0380015209.01.T01 | MTR_3g095730 | 25.060 | 419 | 280 | 11 | 23 | 424 | 11 | 412 | 5.83e-33 | 129 |
| MsG0380015209.01.T01 | MTR_8g092870 | 26.253 | 419 | 277 | 12 | 23 | 424 | 8 | 411 | 2.84e-32 | 127 |
| MsG0380015209.01.T01 | MTR_5g015210 | 27.132 | 387 | 254 | 8 | 25 | 406 | 67 | 430 | 7.67e-28 | 115 |
| MsG0380015209.01.T01 | MTR_4g107010 | 30.814 | 344 | 198 | 15 | 26 | 349 | 281 | 604 | 4.75e-27 | 114 |
| MsG0380015209.01.T01 | MTR_3g096370 | 68.571 | 70 | 22 | 0 | 22 | 91 | 7 | 76 | 9.86e-27 | 111 |
| MsG0380015209.01.T01 | MTR_2g018010 | 28.213 | 319 | 181 | 12 | 23 | 317 | 290 | 584 | 2.69e-25 | 108 |
| MsG0380015209.01.T01 | MTR_7g078330 | 24.104 | 307 | 215 | 6 | 10 | 313 | 259 | 550 | 7.80e-25 | 107 |
| MsG0380015209.01.T01 | MTR_1g094215 | 26.879 | 346 | 223 | 9 | 25 | 359 | 64 | 390 | 3.09e-24 | 104 |
| MsG0380015209.01.T01 | MTR_1g094215 | 26.879 | 346 | 223 | 9 | 25 | 359 | 247 | 573 | 4.38e-24 | 105 |
| MsG0380015209.01.T01 | MTR_4g091880 | 23.711 | 388 | 243 | 14 | 24 | 409 | 4 | 340 | 6.66e-24 | 102 |
| MsG0380015209.01.T01 | MTR_4g028960 | 27.852 | 298 | 159 | 11 | 22 | 308 | 277 | 529 | 1.53e-23 | 103 |
| MsG0380015209.01.T01 | MTR_1g017770 | 26.521 | 411 | 255 | 11 | 15 | 406 | 31 | 413 | 1.78e-23 | 102 |
| MsG0380015209.01.T01 | MTR_4g091880 | 25.189 | 397 | 254 | 13 | 24 | 409 | 4 | 368 | 6.18e-23 | 100 |
| MsG0380015209.01.T01 | MTR_3g085610 | 27.410 | 332 | 179 | 9 | 2 | 324 | 267 | 545 | 6.79e-23 | 102 |
| MsG0380015209.01.T01 | MTR_7g116600 | 46.000 | 100 | 46 | 3 | 21 | 120 | 74 | 165 | 6.39e-21 | 95.1 |
| MsG0380015209.01.T01 | MTR_7g053260 | 52.174 | 69 | 33 | 0 | 23 | 91 | 76 | 144 | 1.26e-20 | 94.0 |
| MsG0380015209.01.T01 | MTR_3g078160 | 27.385 | 325 | 195 | 12 | 26 | 330 | 276 | 579 | 2.87e-20 | 94.0 |
| MsG0380015209.01.T01 | MTR_3g078160 | 27.385 | 325 | 195 | 12 | 26 | 330 | 276 | 579 | 3.12e-20 | 93.6 |
| MsG0380015209.01.T01 | MTR_5g034440 | 43.363 | 113 | 48 | 3 | 29 | 130 | 284 | 391 | 4.91e-19 | 90.1 |
| MsG0380015209.01.T01 | MTR_3g078160 | 51.429 | 70 | 34 | 0 | 26 | 95 | 276 | 345 | 1.43e-18 | 88.2 |
| MsG0380015209.01.T01 | MTR_1g069845 | 47.143 | 70 | 37 | 0 | 23 | 92 | 122 | 191 | 2.43e-18 | 87.8 |
| MsG0380015209.01.T01 | MTR_1g069845 | 47.143 | 70 | 37 | 0 | 23 | 92 | 243 | 312 | 4.10e-18 | 87.4 |
| MsG0380015209.01.T01 | MTR_1g069845 | 47.143 | 70 | 37 | 0 | 23 | 92 | 239 | 308 | 4.12e-18 | 87.4 |
| MsG0380015209.01.T01 | MTR_7g097020 | 44.595 | 74 | 41 | 0 | 23 | 96 | 239 | 312 | 4.80e-18 | 87.0 |
| MsG0380015209.01.T01 | MTR_8g080280 | 39.560 | 91 | 49 | 1 | 26 | 116 | 283 | 367 | 5.30e-18 | 87.0 |
| MsG0380015209.01.T01 | MTR_1g079450 | 26.370 | 292 | 186 | 11 | 23 | 303 | 61 | 334 | 6.92e-18 | 85.9 |
| MsG0380015209.01.T01 | MTR_2g011140 | 23.936 | 376 | 240 | 12 | 28 | 389 | 18 | 361 | 4.39e-17 | 82.8 |
| MsG0380015209.01.T01 | MTR_8g077205 | 23.465 | 456 | 286 | 12 | 23 | 422 | 161 | 609 | 2.14e-16 | 82.0 |
| MsG0380015209.01.T01 | MTR_8g077205 | 23.465 | 456 | 286 | 12 | 23 | 422 | 273 | 721 | 2.58e-16 | 81.6 |
| MsG0380015209.01.T01 | MTR_2g096850 | 46.479 | 71 | 38 | 0 | 21 | 91 | 585 | 655 | 1.38e-15 | 79.3 |
| MsG0380015209.01.T01 | MTR_2g096850 | 46.479 | 71 | 38 | 0 | 21 | 91 | 736 | 806 | 1.66e-15 | 79.3 |
| MsG0380015209.01.T01 | MTR_7g117890 | 29.070 | 258 | 150 | 10 | 29 | 281 | 259 | 488 | 2.20e-15 | 79.0 |
| MsG0380015209.01.T01 | MTR_3g466220 | 41.892 | 74 | 43 | 0 | 23 | 96 | 231 | 304 | 7.33e-15 | 77.4 |
| MsG0380015209.01.T01 | MTR_3g466220 | 41.892 | 74 | 43 | 0 | 23 | 96 | 210 | 283 | 7.37e-15 | 77.4 |
| MsG0380015209.01.T01 | MTR_5g020570 | 38.372 | 86 | 49 | 2 | 21 | 106 | 269 | 350 | 9.24e-15 | 77.0 |
| MsG0380015209.01.T01 | MTR_5g020570 | 38.372 | 86 | 49 | 2 | 21 | 106 | 284 | 365 | 1.00e-14 | 77.0 |
| MsG0380015209.01.T01 | MTR_3g096370 | 72.093 | 43 | 12 | 0 | 22 | 64 | 7 | 49 | 4.97e-14 | 72.8 |
| MsG0380015209.01.T01 | MTR_1g093965 | 48.276 | 58 | 30 | 0 | 38 | 95 | 1 | 58 | 9.76e-14 | 70.1 |
| MsG0380015209.01.T01 | MTR_1g090320 | 38.947 | 95 | 51 | 3 | 20 | 107 | 504 | 598 | 2.80e-13 | 72.8 |
| MsG0380015209.01.T01 | MTR_1g090320 | 38.947 | 95 | 51 | 3 | 20 | 107 | 506 | 600 | 3.06e-13 | 72.4 |
| MsG0380015209.01.T01 | MTR_1g093995 | 48.276 | 58 | 30 | 0 | 38 | 95 | 1 | 58 | 3.23e-13 | 68.6 |
| MsG0380015209.01.T01 | MTR_8g103227 | 42.667 | 75 | 42 | 1 | 24 | 97 | 394 | 468 | 1.19e-12 | 70.5 |
| MsG0380015209.01.T01 | MTR_5g032010 | 34.247 | 73 | 48 | 0 | 25 | 97 | 732 | 804 | 5.78e-12 | 68.2 |
| MsG0380015209.01.T01 | MTR_8g027140 | 42.647 | 68 | 39 | 0 | 29 | 96 | 263 | 330 | 9.40e-12 | 67.8 |
| MsG0380015209.01.T01 | MTR_3g008280 | 43.939 | 66 | 36 | 1 | 26 | 91 | 732 | 796 | 1.76e-11 | 66.6 |
| MsG0380015209.01.T01 | MTR_3g008280 | 43.939 | 66 | 36 | 1 | 26 | 91 | 740 | 804 | 1.83e-11 | 66.6 |
| MsG0380015209.01.T01 | MTR_3g008270 | 43.939 | 66 | 36 | 1 | 26 | 91 | 731 | 795 | 2.78e-11 | 66.2 |
| MsG0380015209.01.T01 | MTR_7g005940 | 38.356 | 73 | 44 | 1 | 24 | 95 | 594 | 666 | 3.30e-11 | 65.9 |
| MsG0380015209.01.T01 | MTR_7g005940 | 38.356 | 73 | 44 | 1 | 24 | 95 | 594 | 666 | 3.42e-11 | 65.9 |
| MsG0380015209.01.T01 | MTR_1g100820 | 36.364 | 66 | 42 | 0 | 26 | 91 | 647 | 712 | 4.56e-11 | 65.5 |
| MsG0380015209.01.T01 | MTR_1g100820 | 36.364 | 66 | 42 | 0 | 26 | 91 | 649 | 714 | 4.64e-11 | 65.5 |
| MsG0380015209.01.T01 | MTR_3g115670 | 24.658 | 292 | 170 | 11 | 29 | 305 | 34 | 290 | 4.66e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015209.01.T01 | AT5G37490 | 46.747 | 415 | 202 | 8 | 22 | 427 | 28 | 432 | 3.33e-110 | 332 |
| MsG0380015209.01.T01 | AT1G66160 | 41.587 | 416 | 216 | 9 | 22 | 427 | 30 | 428 | 2.77e-100 | 306 |
| MsG0380015209.01.T01 | AT1G66160 | 39.183 | 416 | 210 | 10 | 22 | 427 | 30 | 412 | 3.40e-88 | 274 |
| MsG0380015209.01.T01 | AT3G02840 | 42.775 | 346 | 179 | 7 | 96 | 427 | 36 | 376 | 5.42e-76 | 241 |
| MsG0380015209.01.T01 | AT2G35930 | 34.917 | 421 | 249 | 8 | 16 | 425 | 3 | 409 | 4.13e-63 | 209 |
| MsG0380015209.01.T01 | AT3G52450 | 32.222 | 450 | 241 | 13 | 21 | 425 | 3 | 433 | 1.33e-55 | 190 |
| MsG0380015209.01.T01 | AT1G49780 | 33.252 | 409 | 249 | 11 | 12 | 407 | 1 | 398 | 7.72e-55 | 187 |
| MsG0380015209.01.T01 | AT3G19380 | 32.990 | 388 | 230 | 12 | 23 | 395 | 12 | 384 | 1.28e-53 | 184 |
| MsG0380015209.01.T01 | AT3G11840 | 32.379 | 454 | 247 | 13 | 21 | 426 | 6 | 447 | 9.81e-47 | 167 |
| MsG0380015209.01.T01 | AT2G28830 | 27.594 | 424 | 267 | 13 | 7 | 413 | 166 | 566 | 3.89e-34 | 134 |
| MsG0380015209.01.T01 | AT5G09800 | 27.273 | 396 | 259 | 11 | 24 | 407 | 10 | 388 | 2.93e-33 | 129 |
| MsG0380015209.01.T01 | AT1G23030 | 27.363 | 402 | 246 | 14 | 21 | 407 | 237 | 607 | 3.84e-32 | 129 |
| MsG0380015209.01.T01 | AT5G64660 | 27.206 | 408 | 258 | 13 | 23 | 407 | 8 | 399 | 4.65e-32 | 126 |
| MsG0380015209.01.T01 | AT1G71020 | 27.361 | 413 | 253 | 14 | 15 | 407 | 85 | 470 | 8.41e-32 | 126 |
| MsG0380015209.01.T01 | AT3G46510 | 25.758 | 396 | 259 | 12 | 25 | 408 | 256 | 628 | 1.22e-31 | 127 |
| MsG0380015209.01.T01 | AT1G71020 | 27.361 | 413 | 253 | 14 | 15 | 407 | 233 | 618 | 3.06e-31 | 126 |
| MsG0380015209.01.T01 | AT3G49810 | 25.954 | 393 | 263 | 6 | 25 | 412 | 64 | 433 | 1.27e-30 | 123 |
| MsG0380015209.01.T01 | AT5G65920 | 26.329 | 395 | 263 | 7 | 25 | 414 | 60 | 431 | 2.32e-29 | 119 |
| MsG0380015209.01.T01 | AT5G65920 | 26.329 | 395 | 263 | 7 | 25 | 414 | 60 | 431 | 2.32e-29 | 119 |
| MsG0380015209.01.T01 | AT3G54850 | 27.204 | 397 | 253 | 13 | 25 | 408 | 248 | 621 | 6.21e-27 | 114 |
| MsG0380015209.01.T01 | AT3G18710 | 26.485 | 404 | 260 | 12 | 23 | 407 | 10 | 395 | 5.51e-26 | 109 |
| MsG0380015209.01.T01 | AT5G42340 | 24.621 | 264 | 181 | 6 | 23 | 282 | 288 | 537 | 9.72e-22 | 98.2 |
| MsG0380015209.01.T01 | AT3G07360 | 50.000 | 76 | 38 | 0 | 20 | 95 | 69 | 144 | 1.20e-20 | 94.4 |
| MsG0380015209.01.T01 | AT1G29340 | 50.588 | 85 | 41 | 1 | 23 | 106 | 303 | 387 | 1.32e-19 | 92.0 |
| MsG0380015209.01.T01 | AT4G21350 | 26.282 | 312 | 197 | 11 | 25 | 328 | 5 | 291 | 2.51e-19 | 89.4 |
| MsG0380015209.01.T01 | AT1G27910 | 50.000 | 70 | 35 | 0 | 26 | 95 | 280 | 349 | 4.63e-19 | 90.5 |
| MsG0380015209.01.T01 | AT5G01830 | 42.857 | 91 | 40 | 2 | 2 | 92 | 263 | 341 | 2.88e-18 | 87.8 |
| MsG0380015209.01.T01 | AT1G67530 | 45.000 | 80 | 40 | 1 | 26 | 105 | 273 | 348 | 9.59e-18 | 85.9 |
| MsG0380015209.01.T01 | AT1G67530 | 45.000 | 80 | 40 | 1 | 26 | 105 | 273 | 348 | 1.19e-17 | 85.9 |
| MsG0380015209.01.T01 | AT1G67530 | 45.000 | 80 | 40 | 1 | 26 | 105 | 273 | 348 | 1.19e-17 | 85.9 |
| MsG0380015209.01.T01 | AT1G67530 | 45.000 | 80 | 40 | 1 | 26 | 105 | 273 | 348 | 1.19e-17 | 85.9 |
| MsG0380015209.01.T01 | AT1G24330 | 47.143 | 70 | 37 | 0 | 26 | 95 | 276 | 345 | 1.62e-17 | 85.5 |
| MsG0380015209.01.T01 | AT1G24330 | 47.143 | 70 | 37 | 0 | 26 | 95 | 276 | 345 | 1.62e-17 | 85.5 |
| MsG0380015209.01.T01 | AT1G60190 | 25.434 | 346 | 231 | 12 | 29 | 359 | 282 | 615 | 2.55e-17 | 84.7 |
| MsG0380015209.01.T01 | AT3G54790 | 47.945 | 73 | 38 | 0 | 23 | 95 | 200 | 272 | 4.00e-17 | 84.3 |
| MsG0380015209.01.T01 | AT3G54790 | 47.945 | 73 | 38 | 0 | 23 | 95 | 236 | 308 | 5.02e-17 | 84.0 |
| MsG0380015209.01.T01 | AT3G54790 | 47.945 | 73 | 38 | 0 | 23 | 95 | 236 | 308 | 5.02e-17 | 84.0 |
| MsG0380015209.01.T01 | AT5G67340 | 44.737 | 76 | 42 | 0 | 23 | 98 | 238 | 313 | 6.86e-17 | 83.6 |
| MsG0380015209.01.T01 | AT5G67340 | 44.737 | 76 | 42 | 0 | 23 | 98 | 238 | 313 | 6.86e-17 | 83.6 |
| MsG0380015209.01.T01 | AT1G10560 | 27.139 | 339 | 214 | 13 | 31 | 351 | 294 | 617 | 1.34e-16 | 82.8 |
| MsG0380015209.01.T01 | AT4G36550 | 40.278 | 72 | 43 | 0 | 24 | 95 | 218 | 289 | 1.96e-15 | 79.0 |
| MsG0380015209.01.T01 | AT1G01660 | 39.437 | 71 | 43 | 0 | 26 | 96 | 499 | 569 | 1.10e-14 | 76.6 |
| MsG0380015209.01.T01 | AT1G01660 | 39.437 | 71 | 43 | 0 | 26 | 96 | 498 | 568 | 1.18e-14 | 76.3 |
| MsG0380015209.01.T01 | AT1G01680 | 38.571 | 70 | 43 | 0 | 29 | 98 | 237 | 306 | 1.45e-14 | 74.7 |
| MsG0380015209.01.T01 | AT2G45920 | 39.744 | 78 | 47 | 0 | 21 | 98 | 321 | 398 | 1.72e-14 | 75.1 |
| MsG0380015209.01.T01 | AT2G23140 | 39.286 | 84 | 47 | 1 | 23 | 106 | 231 | 310 | 2.08e-14 | 75.9 |
| MsG0380015209.01.T01 | AT2G23140 | 39.286 | 84 | 47 | 1 | 23 | 106 | 228 | 307 | 2.14e-14 | 75.9 |
| MsG0380015209.01.T01 | AT2G23140 | 39.286 | 84 | 47 | 1 | 23 | 106 | 228 | 307 | 2.14e-14 | 75.9 |
| MsG0380015209.01.T01 | AT2G23140 | 42.466 | 73 | 42 | 0 | 23 | 95 | 39 | 111 | 2.84e-14 | 75.5 |
| MsG0380015209.01.T01 | AT2G23140 | 42.466 | 73 | 42 | 0 | 23 | 95 | 39 | 111 | 2.84e-14 | 75.5 |
| MsG0380015209.01.T01 | AT5G65500 | 40.299 | 67 | 40 | 0 | 25 | 91 | 723 | 789 | 2.14e-13 | 72.8 |
| MsG0380015209.01.T01 | AT5G65500 | 40.299 | 67 | 40 | 0 | 25 | 91 | 715 | 781 | 2.31e-13 | 72.8 |
| MsG0380015209.01.T01 | AT1G56030 | 36.957 | 92 | 54 | 1 | 2 | 89 | 296 | 387 | 2.71e-13 | 71.6 |
| MsG0380015209.01.T01 | AT5G57035 | 40.909 | 66 | 39 | 0 | 26 | 91 | 709 | 774 | 2.78e-13 | 72.4 |
| MsG0380015209.01.T01 | AT5G51270 | 44.286 | 70 | 38 | 1 | 26 | 95 | 736 | 804 | 8.32e-13 | 70.9 |
| MsG0380015209.01.T01 | AT5G51270 | 44.286 | 70 | 38 | 1 | 26 | 95 | 736 | 804 | 8.32e-13 | 70.9 |
| MsG0380015209.01.T01 | AT2G19410 | 43.939 | 66 | 36 | 1 | 26 | 91 | 712 | 776 | 1.29e-12 | 70.5 |
| MsG0380015209.01.T01 | AT2G19410 | 43.939 | 66 | 36 | 1 | 26 | 91 | 726 | 790 | 1.32e-12 | 70.5 |
| MsG0380015209.01.T01 | AT2G19410 | 43.939 | 66 | 36 | 1 | 26 | 91 | 747 | 811 | 1.39e-12 | 70.1 |
| MsG0380015209.01.T01 | AT3G61390 | 37.879 | 66 | 41 | 0 | 26 | 91 | 279 | 344 | 3.24e-12 | 68.2 |
| MsG0380015209.01.T01 | AT3G61390 | 37.879 | 66 | 41 | 0 | 26 | 91 | 354 | 419 | 4.34e-12 | 68.2 |
| MsG0380015209.01.T01 | AT1G56040 | 40.625 | 64 | 38 | 0 | 26 | 89 | 354 | 417 | 4.40e-12 | 67.8 |
| MsG0380015209.01.T01 | AT3G49060 | 37.879 | 66 | 41 | 0 | 26 | 91 | 726 | 791 | 8.63e-12 | 67.8 |
| MsG0380015209.01.T01 | AT3G49060 | 37.879 | 66 | 41 | 0 | 26 | 91 | 736 | 801 | 8.83e-12 | 67.8 |
| MsG0380015209.01.T01 | AT3G49060 | 37.879 | 66 | 41 | 0 | 26 | 91 | 703 | 768 | 8.98e-12 | 67.8 |
Find 80 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTGTGGATGGAGAAAA+AGG | 0.208941 | 3:+66873022 | MsG0380015209.01.T01:CDS |
| ACACCTCGTATACCTGTTTC+AGG | 0.250956 | 3:+66872434 | MsG0380015209.01.T01:CDS |
| TGAAAAGGCACTAGGTGTTT+TGG | 0.279784 | 3:+66873051 | MsG0380015209.01.T01:CDS |
| GAAAGTTTCTGATTCGTAAC+TGG | 0.281347 | 3:-66872320 | None:intergenic |
| TAGTGAAAAGTTTGTTGAAT+TGG | 0.285054 | 3:+66872976 | MsG0380015209.01.T01:CDS |
| TGAGGAACATGTTGTTGTTT+TGG | 0.298411 | 3:+66872649 | MsG0380015209.01.T01:CDS |
| ATTCCTGTTGATAGAGTTAC+TGG | 0.298592 | 3:-66872242 | None:intergenic |
| TGTCTTTGAATTGTTTAGTT+TGG | 0.304813 | 3:+66872750 | MsG0380015209.01.T01:CDS |
| AAGTTGGTGTTTAGCTTTGC+CGG | 0.325510 | 3:-66872135 | None:intergenic |
| AGTGAAAAGTTTGTTGAATT+GGG | 0.331127 | 3:+66872977 | MsG0380015209.01.T01:CDS |
| TGAGTTTGTTGGTAAGATTA+AGG | 0.340828 | 3:+66872526 | MsG0380015209.01.T01:CDS |
| TGGATTGTTAAAACTTCTTT+CGG | 0.343558 | 3:+66872695 | MsG0380015209.01.T01:CDS |
| GTTGTCGGGTTGTAGAAATT+TGG | 0.371187 | 3:+66872487 | MsG0380015209.01.T01:CDS |
| TGTGTTGAGAATAGTTCTTA+TGG | 0.376203 | 3:+66872395 | MsG0380015209.01.T01:CDS |
| CACCGTTAATTCGCCGTCGC+CGG | 0.379303 | 3:-66872159 | None:intergenic |
| GAGAGAGTGAGAGGAATAAG+AGG | 0.381694 | 3:+66872558 | MsG0380015209.01.T01:CDS |
| AAGATTGTTAAGGAACCAAT+TGG | 0.381968 | 3:+66872881 | MsG0380015209.01.T01:CDS |
| GACTCACCGGACAACGGAAA+TGG | 0.385326 | 3:-66872202 | None:intergenic |
| TGAAGGTGTTGTTGAGGGTT+TGG | 0.390663 | 3:+66872856 | MsG0380015209.01.T01:CDS |
| GAAGATGCTTTGTGAGAAGA+AGG | 0.393306 | 3:+66873201 | MsG0380015209.01.T01:CDS |
| TGTTTATGTGATTGCAAGAA+AGG | 0.404590 | 3:+66873076 | MsG0380015209.01.T01:CDS |
| TTTGTAGCACTTGACCCAAT+TGG | 0.406484 | 3:-66872896 | None:intergenic |
| CCCAACCCATTTCCGTTGTC+CGG | 0.411042 | 3:+66872196 | MsG0380015209.01.T01:CDS |
| TGTTGGTTATGTTGCAAGTT+GGG | 0.414797 | 3:+66873272 | MsG0380015209.01.T01:CDS |
| TCCCGGCGACGGCGAATTAA+CGG | 0.417616 | 3:+66872157 | MsG0380015209.01.T01:CDS |
| AAGAGGGTTATAGTTGGAAA+TGG | 0.433961 | 3:+66872575 | MsG0380015209.01.T01:CDS |
| AAAGCTAAACACCAACTTCC+CGG | 0.434603 | 3:+66872140 | MsG0380015209.01.T01:CDS |
| AAAGTTTGTTGAATTGGGTT+TGG | 0.438107 | 3:+66872982 | MsG0380015209.01.T01:CDS |
| GTGTTGAGAATAGTTCTTAT+GGG | 0.442497 | 3:+66872396 | MsG0380015209.01.T01:CDS |
| TTAACCTCGTACCCTGAAAC+AGG | 0.448130 | 3:-66872446 | None:intergenic |
| ACCGTTAATTCGCCGTCGCC+GGG | 0.453296 | 3:-66872158 | None:intergenic |
| GGTTTGTACTAGGTTGTTGT+CGG | 0.456977 | 3:+66872472 | MsG0380015209.01.T01:CDS |
| CCGGACAACGGAAATGGGTT+GGG | 0.459441 | 3:-66872196 | None:intergenic |
| AGGAATAAGAGGGTTATAGT+TGG | 0.460339 | 3:+66872569 | MsG0380015209.01.T01:CDS |
| GATCCAGTAACTCTATCAAC+AGG | 0.465887 | 3:+66872239 | MsG0380015209.01.T01:CDS |
| GGGTTTGGTGAAGATTGTTA+AGG | 0.467901 | 3:+66872871 | MsG0380015209.01.T01:CDS |
| AAGATTGAAGGTGTTGTTGA+GGG | 0.472391 | 3:+66872851 | MsG0380015209.01.T01:CDS |
| TTGGTAAGATTAAGGTTTGG+TGG | 0.475482 | 3:+66872534 | MsG0380015209.01.T01:CDS |
| ATAGATTCAGCATCGAGAAA+TGG | 0.477438 | 3:+66872273 | MsG0380015209.01.T01:CDS |
| AAAGTTTCTGATTCGTAACT+GGG | 0.480832 | 3:-66872319 | None:intergenic |
| AGGTTAATGAGGTTTGTACT+AGG | 0.482538 | 3:+66872462 | MsG0380015209.01.T01:CDS |
| ACTCACCGGACAACGGAAAT+GGG | 0.483936 | 3:-66872201 | None:intergenic |
| ACCGGACAACGGAAATGGGT+TGG | 0.495073 | 3:-66872197 | None:intergenic |
| GTTTATGTGATTGCAAGAAA+GGG | 0.496421 | 3:+66873077 | MsG0380015209.01.T01:CDS |
| ATTCGCCGTCGCCGGGAAGT+TGG | 0.506166 | 3:-66872151 | None:intergenic |
| AGAGAGTGAGAGGAATAAGA+GGG | 0.507848 | 3:+66872559 | MsG0380015209.01.T01:CDS |
| GAAGAGTTATCAAAGATTGA+AGG | 0.508398 | 3:+66872839 | MsG0380015209.01.T01:CDS |
| ATCGAGAAATGGATCGAAGC+TGG | 0.513343 | 3:+66872284 | MsG0380015209.01.T01:CDS |
| TTGTTGGTAAGATTAAGGTT+TGG | 0.516876 | 3:+66872531 | MsG0380015209.01.T01:CDS |
| TTGTTGGTTATGTTGCAAGT+TGG | 0.518220 | 3:+66873271 | MsG0380015209.01.T01:CDS |
| TTTGGTGGAGAGAGAGTGAG+AGG | 0.525448 | 3:+66872549 | MsG0380015209.01.T01:CDS |
| GTTTGTACTAGGTTGTTGTC+GGG | 0.528503 | 3:+66872473 | MsG0380015209.01.T01:CDS |
| AGAAACATGTTCCGCCGCAC+CGG | 0.531078 | 3:+66872116 | None:intergenic |
| GAGTTGTTGAAATTGTTGAA+TGG | 0.546361 | 3:+66873325 | MsG0380015209.01.T01:CDS |
| TTCAGGGTACGAGGTTAATG+AGG | 0.547582 | 3:+66872451 | MsG0380015209.01.T01:CDS |
| TTGATTGAAGCAATTCAACT+TGG | 0.549684 | 3:+66873235 | MsG0380015209.01.T01:CDS |
| AAAGATTGAAGGTGTTGTTG+AGG | 0.552708 | 3:+66872850 | MsG0380015209.01.T01:CDS |
| TTGCTTGAAACAATTGTGGA+TGG | 0.558779 | 3:+66873013 | MsG0380015209.01.T01:CDS |
| GTTTAGCTTTGCCGGTGCGG+CGG | 0.564843 | 3:-66872127 | None:intergenic |
| GAAACAGGTATACGAGGTGT+TGG | 0.567045 | 3:-66872431 | None:intergenic |
| CACCTCGTATACCTGTTTCA+GGG | 0.570954 | 3:+66872435 | MsG0380015209.01.T01:CDS |
| TTCATCAAGTCTAGACTCAC+CGG | 0.580014 | 3:-66872215 | None:intergenic |
| TGAAACCAACTTGAAAATTG+TGG | 0.580219 | 3:-66872930 | None:intergenic |
| AGATTGTTAAGGAACCAATT+GGG | 0.580879 | 3:+66872882 | MsG0380015209.01.T01:CDS |
| CGACGGCGAATTAACGGTGG+AGG | 0.584194 | 3:+66872163 | MsG0380015209.01.T01:CDS |
| GGTGTTTAGCTTTGCCGGTG+CGG | 0.584454 | 3:-66872130 | None:intergenic |
| AAACACCAACTTCCCGGCGA+CGG | 0.585670 | 3:+66872146 | MsG0380015209.01.T01:CDS |
| TATGTTGCAAGTTGGGTGTG+AGG | 0.588109 | 3:+66873279 | MsG0380015209.01.T01:CDS |
| AAAAGCTTCTTAATCACGAG+AGG | 0.590068 | 3:-66873133 | None:intergenic |
| TGATTGCAAGAAAGGGAAAG+AGG | 0.594131 | 3:+66873084 | MsG0380015209.01.T01:CDS |
| CTCGATGCTGAATCTATCGT+AGG | 0.614355 | 3:-66872267 | None:intergenic |
| GGGATATGTGAAAAGGCACT+AGG | 0.622666 | 3:+66873043 | MsG0380015209.01.T01:CDS |
| GTGATTTGGTGTGATTACGA+AGG | 0.625645 | 3:-66872345 | None:intergenic |
| ACAGCAAAACTAGAAGCCAA+AGG | 0.636688 | 3:-66873166 | None:intergenic |
| AGTCTAGACTCACCGGACAA+CGG | 0.656680 | 3:-66872208 | None:intergenic |
| TATACCTGTTTCAGGGTACG+AGG | 0.666671 | 3:+66872442 | MsG0380015209.01.T01:CDS |
| TGGGTGTGAGGAGAAAACAA+AGG | 0.673609 | 3:+66873291 | MsG0380015209.01.T01:CDS |
| GTGTGAGGAGAAAACAAAGG+AGG | 0.681227 | 3:+66873294 | MsG0380015209.01.T01:CDS |
| CGGCGACGGCGAATTAACGG+TGG | 0.690475 | 3:+66872160 | MsG0380015209.01.T01:CDS |
| TACCCTGAAACAGGTATACG+AGG | 0.702105 | 3:-66872437 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAGATGGTAAAGATTT+AGG | + | Chr3:66872773-66872792 | MsG0380015209.01.T01:CDS | 20.0% |
| ! | TAAGAAAAATGATTCAGAGT+TGG | + | Chr3:66872372-66872391 | MsG0380015209.01.T01:CDS | 25.0% |
| ! | TGGATTGTTAAAACTTCTTT+CGG | + | Chr3:66872695-66872714 | MsG0380015209.01.T01:CDS | 25.0% |
| ! | TGTCTTTGAATTGTTTAGTT+TGG | + | Chr3:66872750-66872769 | MsG0380015209.01.T01:CDS | 25.0% |
| !! | ATTTTTCTTATGGTGTGATT+TGG | - | Chr3:66872362-66872381 | None:intergenic | 25.0% |
| !! | ATTTTTGCTTGAAACAATTG+TGG | + | Chr3:66873009-66873028 | MsG0380015209.01.T01:CDS | 25.0% |
| !! | TTTTTCATGTGTTTCTTTTG+AGG | + | Chr3:66872631-66872650 | MsG0380015209.01.T01:CDS | 25.0% |
| !!! | AATTTTCAAGTTGGTTTCAT+CGG | + | Chr3:66872934-66872953 | MsG0380015209.01.T01:CDS | 25.0% |
| !!! | ACTCTGAATCATTTTTCTTA+TGG | - | Chr3:66872372-66872391 | None:intergenic | 25.0% |
| !!! | AGATTTTGGAGATTTTAACA+TGG | + | Chr3:66872675-66872694 | MsG0380015209.01.T01:CDS | 25.0% |
| !!! | AGTGAAAAGTTTGTTGAATT+GGG | + | Chr3:66872977-66872996 | MsG0380015209.01.T01:CDS | 25.0% |
| !!! | TAGTGAAAAGTTTGTTGAAT+TGG | + | Chr3:66872976-66872995 | MsG0380015209.01.T01:CDS | 25.0% |
| !!! | TGTTTAGTTTGGTTTTTAGA+TGG | + | Chr3:66872761-66872780 | MsG0380015209.01.T01:CDS | 25.0% |
| AAGATTGTTAAGGAACCAAT+TGG | + | Chr3:66872881-66872900 | MsG0380015209.01.T01:CDS | 30.0% | |
| AGAAAAAGGGATATGTGAAA+AGG | + | Chr3:66873036-66873055 | MsG0380015209.01.T01:CDS | 30.0% | |
| AGATTGTTAAGGAACCAATT+GGG | + | Chr3:66872882-66872901 | MsG0380015209.01.T01:CDS | 30.0% | |
| GAAGAGTTATCAAAGATTGA+AGG | + | Chr3:66872839-66872858 | MsG0380015209.01.T01:CDS | 30.0% | |
| GAGTTGTTGAAATTGTTGAA+TGG | + | Chr3:66873325-66873344 | MsG0380015209.01.T01:CDS | 30.0% | |
| GTGTTGAGAATAGTTCTTAT+GGG | + | Chr3:66872396-66872415 | MsG0380015209.01.T01:CDS | 30.0% | |
| GTTTATGTGATTGCAAGAAA+GGG | + | Chr3:66873077-66873096 | MsG0380015209.01.T01:CDS | 30.0% | |
| TGAAACCAACTTGAAAATTG+TGG | - | Chr3:66872933-66872952 | None:intergenic | 30.0% | |
| TGTGTTGAGAATAGTTCTTA+TGG | + | Chr3:66872395-66872414 | MsG0380015209.01.T01:CDS | 30.0% | |
| TGTTTATGTGATTGCAAGAA+AGG | + | Chr3:66873076-66873095 | MsG0380015209.01.T01:CDS | 30.0% | |
| TTGATTGAAGCAATTCAACT+TGG | + | Chr3:66873235-66873254 | MsG0380015209.01.T01:CDS | 30.0% | |
| ! | AAAAAGTGTGTTGAGTTTGT+TGG | + | Chr3:66872515-66872534 | MsG0380015209.01.T01:CDS | 30.0% |
| ! | AAAGTTTCTGATTCGTAACT+GGG | - | Chr3:66872322-66872341 | None:intergenic | 30.0% |
| ! | CGTGATTAAGAAGCTTTTAA+GGG | + | Chr3:66873138-66873157 | MsG0380015209.01.T01:CDS | 30.0% |
| ! | TCGTGATTAAGAAGCTTTTA+AGG | + | Chr3:66873137-66873156 | MsG0380015209.01.T01:CDS | 30.0% |
| ! | TTGTTGGTAAGATTAAGGTT+TGG | + | Chr3:66872531-66872550 | MsG0380015209.01.T01:CDS | 30.0% |
| !! | AAAGTTTGTTGAATTGGGTT+TGG | + | Chr3:66872982-66873001 | MsG0380015209.01.T01:CDS | 30.0% |
| !! | TGAGTTTGTTGGTAAGATTA+AGG | + | Chr3:66872526-66872545 | MsG0380015209.01.T01:CDS | 30.0% |
| !!! | AGTTTCTTCTGTTTTAGCTA+CGG | + | Chr3:66872598-66872617 | MsG0380015209.01.T01:CDS | 30.0% |
| !!! | TTTGACCACAATTTTCAAGT+TGG | + | Chr3:66872925-66872944 | MsG0380015209.01.T01:CDS | 30.0% |
| AAAAGCTTCTTAATCACGAG+AGG | - | Chr3:66873136-66873155 | None:intergenic | 35.0% | |
| AAGAGGGTTATAGTTGGAAA+TGG | + | Chr3:66872575-66872594 | MsG0380015209.01.T01:CDS | 35.0% | |
| ACAATTGTGGATGGAGAAAA+AGG | + | Chr3:66873022-66873041 | MsG0380015209.01.T01:CDS | 35.0% | |
| AGGAATAAGAGGGTTATAGT+TGG | + | Chr3:66872569-66872588 | MsG0380015209.01.T01:CDS | 35.0% | |
| AGGTTAATGAGGTTTGTACT+AGG | + | Chr3:66872462-66872481 | MsG0380015209.01.T01:CDS | 35.0% | |
| CAATTGTGGATGGAGAAAAA+GGG | + | Chr3:66873023-66873042 | MsG0380015209.01.T01:CDS | 35.0% | |
| TTGCTTGAAACAATTGTGGA+TGG | + | Chr3:66873013-66873032 | MsG0380015209.01.T01:CDS | 35.0% | |
| TTGGTAAGATTAAGGTTTGG+TGG | + | Chr3:66872534-66872553 | MsG0380015209.01.T01:CDS | 35.0% | |
| ! | ATAGATTCAGCATCGAGAAA+TGG | + | Chr3:66872273-66872292 | MsG0380015209.01.T01:CDS | 35.0% |
| ! | ATTCCTGTTGATAGAGTTAC+TGG | - | Chr3:66872245-66872264 | None:intergenic | 35.0% |
| ! | GAAAGTTTCTGATTCGTAAC+TGG | - | Chr3:66872323-66872342 | None:intergenic | 35.0% |
| ! | TGGTGCTTTTCAGAAATTGT+TGG | + | Chr3:66873255-66873274 | MsG0380015209.01.T01:CDS | 35.0% |
| ! | TGTTGGTTATGTTGCAAGTT+GGG | + | Chr3:66873272-66873291 | MsG0380015209.01.T01:CDS | 35.0% |
| ! | TTGTTGGTTATGTTGCAAGT+TGG | + | Chr3:66873271-66873290 | MsG0380015209.01.T01:CDS | 35.0% |
| !! | AAAGATTGAAGGTGTTGTTG+AGG | + | Chr3:66872850-66872869 | MsG0380015209.01.T01:CDS | 35.0% |
| !! | AAGATTGAAGGTGTTGTTGA+GGG | + | Chr3:66872851-66872870 | MsG0380015209.01.T01:CDS | 35.0% |
| !!! | TGAGGAACATGTTGTTGTTT+TGG | + | Chr3:66872649-66872668 | MsG0380015209.01.T01:CDS | 35.0% |
| !!! | TGTTGTTTTGGAGGAGATTT+TGG | + | Chr3:66872661-66872680 | MsG0380015209.01.T01:CDS | 35.0% |
| AAAGCTAAACACCAACTTCC+CGG | + | Chr3:66872140-66872159 | MsG0380015209.01.T01:CDS | 40.0% | |
| ACAGCAAAACTAGAAGCCAA+AGG | - | Chr3:66873169-66873188 | None:intergenic | 40.0% | |
| AGAGAGTGAGAGGAATAAGA+GGG | + | Chr3:66872559-66872578 | MsG0380015209.01.T01:CDS | 40.0% | |
| GAAGATGCTTTGTGAGAAGA+AGG | + | Chr3:66873201-66873220 | MsG0380015209.01.T01:CDS | 40.0% | |
| GATCCAGTAACTCTATCAAC+AGG | + | Chr3:66872239-66872258 | MsG0380015209.01.T01:CDS | 40.0% | |
| GGTTTGTACTAGGTTGTTGT+CGG | + | Chr3:66872472-66872491 | MsG0380015209.01.T01:CDS | 40.0% | |
| GTTTGTACTAGGTTGTTGTC+GGG | + | Chr3:66872473-66872492 | MsG0380015209.01.T01:CDS | 40.0% | |
| TGATTGCAAGAAAGGGAAAG+AGG | + | Chr3:66873084-66873103 | MsG0380015209.01.T01:CDS | 40.0% | |
| TTCATCAAGTCTAGACTCAC+CGG | - | Chr3:66872218-66872237 | None:intergenic | 40.0% | |
| TTTGTAGCACTTGACCCAAT+TGG | - | Chr3:66872899-66872918 | None:intergenic | 40.0% | |
| ! | GTTGTCGGGTTGTAGAAATT+TGG | + | Chr3:66872487-66872506 | MsG0380015209.01.T01:CDS | 40.0% |
| !! | AAGTTGGTGTTTAGCTTTGC+CGG | - | Chr3:66872138-66872157 | None:intergenic | 40.0% |
| !! | GGGTTTGGTGAAGATTGTTA+AGG | + | Chr3:66872871-66872890 | MsG0380015209.01.T01:CDS | 40.0% |
| !! | GTGATTTGGTGTGATTACGA+AGG | - | Chr3:66872348-66872367 | None:intergenic | 40.0% |
| !!! | GCTTTTAAGGGTATCTCCTT+TGG | + | Chr3:66873150-66873169 | MsG0380015209.01.T01:CDS | 40.0% |
| !!! | GGAACATGTTGTTGTTTTGG+AGG | + | Chr3:66872652-66872671 | MsG0380015209.01.T01:CDS | 40.0% |
| !!! | GTTTTGCTGTTGGGATTGTT+AGG | + | Chr3:66873179-66873198 | MsG0380015209.01.T01:CDS | 40.0% |
| !!! | TGAAAAGGCACTAGGTGTTT+TGG | + | Chr3:66873051-66873070 | MsG0380015209.01.T01:CDS | 40.0% |
| !!! | TGGCTTCTAGTTTTGCTGTT+GGG | + | Chr3:66873170-66873189 | MsG0380015209.01.T01:CDS | 40.0% |
| !!! | TTGGCTTCTAGTTTTGCTGT+TGG | + | Chr3:66873169-66873188 | MsG0380015209.01.T01:CDS | 40.0% |
| ACACCTCGTATACCTGTTTC+AGG | + | Chr3:66872434-66872453 | MsG0380015209.01.T01:CDS | 45.0% | |
| ATCGAGAAATGGATCGAAGC+TGG | + | Chr3:66872284-66872303 | MsG0380015209.01.T01:CDS | 45.0% | |
| CACCTCGTATACCTGTTTCA+GGG | + | Chr3:66872435-66872454 | MsG0380015209.01.T01:CDS | 45.0% | |
| CTCGATGCTGAATCTATCGT+AGG | - | Chr3:66872270-66872289 | None:intergenic | 45.0% | |
| GAAACAGGTATACGAGGTGT+TGG | - | Chr3:66872434-66872453 | None:intergenic | 45.0% | |
| GAGAGAGTGAGAGGAATAAG+AGG | + | Chr3:66872558-66872577 | MsG0380015209.01.T01:CDS | 45.0% | |
| GTGTGAGGAGAAAACAAAGG+AGG | + | Chr3:66873294-66873313 | MsG0380015209.01.T01:CDS | 45.0% | |
| TACCCTGAAACAGGTATACG+AGG | - | Chr3:66872440-66872459 | None:intergenic | 45.0% | |
| TATACCTGTTTCAGGGTACG+AGG | + | Chr3:66872442-66872461 | MsG0380015209.01.T01:CDS | 45.0% | |
| TGGGTGTGAGGAGAAAACAA+AGG | + | Chr3:66873291-66873310 | MsG0380015209.01.T01:CDS | 45.0% | |
| TTAACCTCGTACCCTGAAAC+AGG | - | Chr3:66872449-66872468 | None:intergenic | 45.0% | |
| TTCAGGGTACGAGGTTAATG+AGG | + | Chr3:66872451-66872470 | MsG0380015209.01.T01:CDS | 45.0% | |
| ! | TATGTTGCAAGTTGGGTGTG+AGG | + | Chr3:66873279-66873298 | MsG0380015209.01.T01:CDS | 45.0% |
| !! | GGGATATGTGAAAAGGCACT+AGG | + | Chr3:66873043-66873062 | MsG0380015209.01.T01:CDS | 45.0% |
| !! | TGAAGGTGTTGTTGAGGGTT+TGG | + | Chr3:66872856-66872875 | MsG0380015209.01.T01:CDS | 45.0% |
| ACTCACCGGACAACGGAAAT+GGG | - | Chr3:66872204-66872223 | None:intergenic | 50.0% | |
| AGTCTAGACTCACCGGACAA+CGG | - | Chr3:66872211-66872230 | None:intergenic | 50.0% | |
| TTTGGTGGAGAGAGAGTGAG+AGG | + | Chr3:66872549-66872568 | MsG0380015209.01.T01:CDS | 50.0% | |
| AAACACCAACTTCCCGGCGA+CGG | + | Chr3:66872146-66872165 | MsG0380015209.01.T01:CDS | 55.0% | |
| ACCGGACAACGGAAATGGGT+TGG | - | Chr3:66872200-66872219 | None:intergenic | 55.0% | |
| CCCAACCCATTTCCGTTGTC+CGG | + | Chr3:66872196-66872215 | MsG0380015209.01.T01:CDS | 55.0% | |
| GACTCACCGGACAACGGAAA+TGG | - | Chr3:66872205-66872224 | None:intergenic | 55.0% | |
| ! | CCGGACAACGGAAATGGGTT+GGG | - | Chr3:66872199-66872218 | None:intergenic | 55.0% |
| !! | GGTGTTTAGCTTTGCCGGTG+CGG | - | Chr3:66872133-66872152 | None:intergenic | 55.0% |
| ACCGTTAATTCGCCGTCGCC+GGG | - | Chr3:66872161-66872180 | None:intergenic | 60.0% | |
| CACCGTTAATTCGCCGTCGC+CGG | - | Chr3:66872162-66872181 | None:intergenic | 60.0% | |
| CGACGGCGAATTAACGGTGG+AGG | + | Chr3:66872163-66872182 | MsG0380015209.01.T01:CDS | 60.0% | |
| TCCCGGCGACGGCGAATTAA+CGG | + | Chr3:66872157-66872176 | MsG0380015209.01.T01:CDS | 60.0% | |
| !! | GTTTAGCTTTGCCGGTGCGG+CGG | - | Chr3:66872130-66872149 | None:intergenic | 60.0% |
| ATTCGCCGTCGCCGGGAAGT+TGG | - | Chr3:66872154-66872173 | None:intergenic | 65.0% | |
| CGGCGACGGCGAATTAACGG+TGG | + | Chr3:66872160-66872179 | MsG0380015209.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 66872122 | 66873408 | 66872122 | ID=MsG0380015209.01;Name=MsG0380015209.01 |
| Chr3 | mRNA | 66872122 | 66873408 | 66872122 | ID=MsG0380015209.01.T01;Parent=MsG0380015209.01;Name=MsG0380015209.01.T01;_AED=0.12;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|428 |
| Chr3 | exon | 66872122 | 66873408 | 66872122 | ID=MsG0380015209.01.T01:exon:13443;Parent=MsG0380015209.01.T01 |
| Chr3 | CDS | 66872122 | 66873408 | 66872122 | ID=MsG0380015209.01.T01:cds;Parent=MsG0380015209.01.T01 |
| Gene Sequence |
| Protein sequence |
