AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034672.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034672.01.T03 MTR_6g071340 97.756 401 9 0 1 401 18 418 0.0 806
MsG0680034672.01.T03 MTR_5g048050 96.758 401 13 0 1 401 38 438 0.0 795
MsG0680034672.01.T03 MTR_5g077510 50.245 408 183 9 1 401 48 442 2.43e-127 374
MsG0680034672.01.T03 MTR_3g065080 48.139 403 191 7 1 398 49 438 8.06e-117 347
MsG0680034672.01.T03 MTR_1g056880 30.976 410 236 11 1 378 20 414 2.43e-49 173
MsG0680034672.01.T03 MTR_1g056870 30.976 410 236 11 1 378 20 414 2.61e-49 172
MsG0680034672.01.T03 MTR_2g087350 34.961 389 218 12 1 378 19 383 1.27e-48 170
MsG0680034672.01.T03 MTR_7g106340 28.967 397 244 11 1 378 21 398 1.17e-43 157
MsG0680034672.01.T03 MTR_4g085720 30.928 388 234 10 1 379 27 389 3.09e-41 150
MsG0680034672.01.T03 MTR_1g056840 29.298 413 213 13 1 378 20 388 9.69e-41 149
MsG0680034672.01.T03 MTR_1g056910 29.793 386 244 11 1 377 19 386 4.59e-36 136
MsG0680034672.01.T03 MTR_5g015210 28.906 384 234 9 1 378 80 430 3.77e-32 126
MsG0680034672.01.T03 MTR_8g092870 25.990 404 268 9 1 392 23 407 7.00e-32 125
MsG0680034672.01.T03 MTR_3g095730 26.406 409 258 15 1 392 26 408 1.17e-28 116
MsG0680034672.01.T03 MTR_4g051515 26.582 395 252 16 1 378 19 392 7.88e-28 114
MsG0680034672.01.T03 MTR_1g017770 25.581 387 248 9 1 378 58 413 4.70e-23 100
MsG0680034672.01.T03 MTR_4g063800 27.317 410 224 17 1 383 268 630 1.44e-21 97.4
MsG0680034672.01.T03 MTR_4g485520 25.954 393 241 13 1 377 118 476 4.71e-21 95.1
MsG0680034672.01.T03 MTR_4g485520 25.954 393 241 13 1 377 286 644 5.70e-21 95.5
MsG0680034672.01.T03 MTR_7g078330 24.474 380 260 11 1 379 287 640 6.68e-18 86.3
MsG0680034672.01.T03 MTR_5g083030 23.614 415 246 10 1 380 306 684 4.04e-16 80.9
MsG0680034672.01.T03 MTR_3g096370 25.000 392 260 13 1 379 23 393 6.43e-16 79.3
MsG0680034672.01.T03 MTR_1g094215 26.895 409 235 17 1 388 77 442 3.24e-15 77.4
MsG0680034672.01.T03 MTR_7g059405 23.990 396 246 16 1 380 277 633 6.82e-15 77.0
MsG0680034672.01.T03 MTR_1g094215 26.895 409 235 17 1 388 260 625 8.73e-15 76.6
MsG0680034672.01.T03 MTR_2g018010 40.449 89 42 1 1 89 305 382 9.31e-15 76.6
MsG0680034672.01.T03 MTR_3g085610 38.961 77 41 1 1 77 293 363 1.29e-14 76.3
MsG0680034672.01.T03 MTR_7g053260 37.500 104 50 2 1 104 91 179 2.42e-14 74.7
MsG0680034672.01.T03 MTR_7g116600 50.725 69 30 2 1 69 91 155 3.10e-14 74.3
MsG0680034672.01.T03 MTR_4g107010 50.000 58 29 0 1 58 293 350 7.16e-14 73.9
MsG0680034672.01.T03 MTR_4g028960 49.153 59 30 0 1 59 293 351 7.37e-14 73.9
MsG0680034672.01.T03 MTR_3g078160 47.458 59 31 0 1 59 288 346 1.49e-13 72.8
MsG0680034672.01.T03 MTR_3g078160 47.458 59 31 0 1 59 288 346 1.59e-13 72.8
MsG0680034672.01.T03 MTR_3g078160 47.458 59 31 0 1 59 288 346 2.56e-13 72.0
MsG0680034672.01.T03 MTR_5g034440 50.909 55 27 0 1 55 293 347 1.15e-12 70.1
MsG0680034672.01.T03 MTR_1g093965 43.750 64 33 1 1 64 1 61 1.96e-12 66.2
MsG0680034672.01.T03 MTR_1g093995 43.750 64 33 1 1 64 1 61 4.49e-12 65.1
MsG0680034672.01.T03 MTR_7g097020 43.103 58 33 0 1 58 254 311 1.33e-11 66.6
MsG0680034672.01.T03 MTR_8g080280 23.182 440 259 19 1 383 295 712 1.33e-11 66.6
MsG0680034672.01.T03 MTR_4g091880 49.091 55 27 1 1 54 18 72 4.17e-11 64.3
MsG0680034672.01.T03 MTR_4g091880 49.091 55 27 1 1 54 18 72 4.19e-11 64.3
MsG0680034672.01.T03 MTR_1g069845 41.818 55 32 0 1 55 137 191 9.34e-11 63.9
MsG0680034672.01.T02 MTR_6g071340 97.608 418 10 0 1 418 1 418 0.0 842
MsG0680034672.01.T02 MTR_5g048050 96.411 418 15 0 1 418 21 438 0.0 828
MsG0680034672.01.T02 MTR_5g077510 50.824 425 189 9 1 418 31 442 4.24e-138 402
MsG0680034672.01.T02 MTR_3g065080 48.687 419 197 7 2 415 33 438 1.30e-126 373
MsG0680034672.01.T02 MTR_2g087350 35.556 405 226 12 2 395 3 383 5.90e-56 190
MsG0680034672.01.T02 MTR_1g056880 31.742 419 239 11 9 395 11 414 3.54e-54 186
MsG0680034672.01.T02 MTR_1g056870 31.742 419 239 11 9 395 11 414 4.70e-54 186
MsG0680034672.01.T02 MTR_7g106340 29.782 413 252 11 2 395 5 398 1.78e-50 176
MsG0680034672.01.T02 MTR_4g085720 32.099 405 241 10 1 396 10 389 2.44e-49 172
MsG0680034672.01.T02 MTR_1g056840 30.095 422 216 13 9 395 11 388 1.10e-45 163
MsG0680034672.01.T02 MTR_1g056910 30.348 402 253 11 2 394 3 386 2.65e-42 154
MsG0680034672.01.T02 MTR_8g092870 26.969 419 275 9 3 409 8 407 3.80e-40 148
MsG0680034672.01.T02 MTR_5g015210 29.471 397 241 9 5 395 67 430 2.45e-37 141
MsG0680034672.01.T02 MTR_3g095730 27.123 424 266 15 3 409 11 408 6.76e-36 137
MsG0680034672.01.T02 MTR_4g051515 27.251 411 261 16 2 395 3 392 1.50e-33 130
MsG0680034672.01.T02 MTR_4g063800 28.169 426 232 17 4 402 254 632 2.38e-28 117
MsG0680034672.01.T02 MTR_4g485520 27.206 408 247 13 3 394 103 476 3.81e-28 116
MsG0680034672.01.T02 MTR_4g485520 27.206 408 247 13 3 394 271 644 7.38e-28 116
MsG0680034672.01.T02 MTR_1g017770 26.250 400 255 9 5 395 45 413 9.25e-28 114
MsG0680034672.01.T02 MTR_7g078330 25.823 395 266 11 3 396 272 640 2.51e-25 108
MsG0680034672.01.T02 MTR_5g083030 25.463 432 251 10 1 397 289 684 3.55e-25 108
MsG0680034672.01.T02 MTR_3g096370 26.716 408 265 13 2 396 7 393 4.55e-25 106
MsG0680034672.01.T02 MTR_1g094215 28.369 423 239 17 4 405 63 442 3.06e-23 101
MsG0680034672.01.T02 MTR_7g059405 25.122 410 252 15 4 397 263 633 3.52e-23 102
MsG0680034672.01.T02 MTR_1g094215 28.369 423 239 17 4 405 246 625 9.77e-23 101
MsG0680034672.01.T02 MTR_4g028960 52.632 76 36 0 1 76 276 351 1.20e-22 100
MsG0680034672.01.T02 MTR_2g018010 42.308 104 49 1 3 106 290 382 4.12e-21 96.3
MsG0680034672.01.T02 MTR_4g107010 52.857 70 33 0 6 75 281 350 2.85e-20 94.0
MsG0680034672.01.T02 MTR_3g085610 41.573 89 46 1 6 94 281 363 3.03e-20 93.6
MsG0680034672.01.T02 MTR_3g078160 46.053 76 41 0 1 76 271 346 5.03e-20 92.8
MsG0680034672.01.T02 MTR_3g078160 46.053 76 41 0 1 76 271 346 5.48e-20 92.8
MsG0680034672.01.T02 MTR_3g078160 46.053 76 41 0 1 76 271 346 8.20e-20 92.0
MsG0680034672.01.T02 MTR_7g053260 36.975 119 60 2 3 121 76 179 9.55e-20 91.3
MsG0680034672.01.T02 MTR_7g116600 50.617 81 36 2 6 86 79 155 9.44e-19 88.6
MsG0680034672.01.T02 MTR_5g034440 53.030 66 31 0 7 72 282 347 2.47e-18 87.8
MsG0680034672.01.T02 MTR_4g091880 47.222 72 37 1 1 71 1 72 2.53e-17 83.2
MsG0680034672.01.T02 MTR_4g091880 47.222 72 37 1 1 71 1 72 2.70e-17 83.2
MsG0680034672.01.T02 MTR_8g080280 24.115 452 264 19 6 400 283 712 2.87e-17 84.7
MsG0680034672.01.T02 MTR_1g069845 44.286 70 39 0 3 72 122 191 6.45e-17 83.2
MsG0680034672.01.T02 MTR_7g097020 46.269 67 36 0 9 75 245 311 6.51e-17 83.6
MsG0680034672.01.T02 MTR_1g069845 44.286 70 39 0 3 72 243 312 1.05e-16 82.8
MsG0680034672.01.T02 MTR_1g069845 44.286 70 39 0 3 72 239 308 1.08e-16 82.8
MsG0680034672.01.T02 MTR_1g079450 39.796 98 52 3 1 98 59 149 1.15e-15 79.0
MsG0680034672.01.T02 MTR_8g077205 41.860 86 46 2 1 86 159 240 1.61e-15 79.0
MsG0680034672.01.T02 MTR_8g077205 41.860 86 46 2 1 86 271 352 1.72e-15 79.0
MsG0680034672.01.T02 MTR_3g466220 39.726 73 44 0 3 75 231 303 2.05e-14 75.9
MsG0680034672.01.T02 MTR_3g466220 39.726 73 44 0 3 75 210 282 2.18e-14 75.9
MsG0680034672.01.T02 MTR_5g020570 39.286 84 47 2 3 86 271 350 3.33e-14 75.1
MsG0680034672.01.T02 MTR_5g020570 39.286 84 47 2 3 86 286 365 3.81e-14 75.1
MsG0680034672.01.T02 MTR_2g011140 43.750 64 36 0 8 71 18 81 6.07e-14 73.2
MsG0680034672.01.T02 MTR_8g103227 45.070 71 38 1 6 75 396 466 4.63e-13 71.6
MsG0680034672.01.T02 MTR_7g117890 47.619 63 33 0 9 71 259 321 5.09e-13 71.6
MsG0680034672.01.T02 MTR_3g115670 42.105 76 39 1 5 75 30 105 1.28e-12 70.1
MsG0680034672.01.T02 MTR_2g096850 40.000 70 42 0 2 71 586 655 1.32e-12 70.1
MsG0680034672.01.T02 MTR_2g096850 40.000 70 42 0 2 71 737 806 1.49e-12 70.1
MsG0680034672.01.T02 MTR_1g093965 43.750 64 33 1 18 81 1 61 2.31e-12 66.2
MsG0680034672.01.T02 MTR_3g096370 66.667 39 13 0 2 40 7 45 3.13e-12 67.4
MsG0680034672.01.T02 MTR_7g077780 39.394 66 40 0 6 71 827 892 3.76e-12 68.9
MsG0680034672.01.T02 MTR_1g093995 43.750 64 33 1 18 81 1 61 4.90e-12 65.1
MsG0680034672.01.T02 MTR_1g090320 43.056 72 38 2 6 75 514 584 5.25e-12 68.6
MsG0680034672.01.T02 MTR_1g090320 43.056 72 38 2 6 75 516 586 5.34e-12 68.6
MsG0680034672.01.T02 MTR_3g008270 45.455 66 35 1 6 71 731 795 6.48e-12 67.8
MsG0680034672.01.T02 MTR_5g032010 37.313 67 42 0 5 71 732 798 1.07e-11 67.4
MsG0680034672.01.T02 MTR_1g100820 37.879 66 41 0 6 71 649 714 1.52e-11 66.6
MsG0680034672.01.T02 MTR_1g100820 37.879 66 41 0 6 71 647 712 1.53e-11 66.6
MsG0680034672.01.T02 MTR_7g005940 39.726 73 41 2 5 75 595 666 6.31e-11 65.1
MsG0680034672.01.T02 MTR_7g005940 39.726 73 41 2 5 75 595 666 6.49e-11 65.1
MsG0680034672.01.T01 MTR_5g048050 96.575 438 15 0 1 438 1 438 0.0 871
MsG0680034672.01.T01 MTR_6g071340 97.608 418 10 0 21 438 1 418 0.0 840
MsG0680034672.01.T01 MTR_5g077510 49.231 455 201 11 1 438 1 442 4.84e-139 405
MsG0680034672.01.T01 MTR_3g065080 46.563 451 212 8 1 435 1 438 3.50e-127 375
MsG0680034672.01.T01 MTR_2g087350 35.556 405 226 12 22 415 3 383 1.56e-55 189
MsG0680034672.01.T01 MTR_1g056880 31.308 428 247 11 20 415 2 414 2.61e-54 187
MsG0680034672.01.T01 MTR_1g056870 31.308 428 247 11 20 415 2 414 2.78e-54 187
MsG0680034672.01.T01 MTR_7g106340 29.782 413 252 11 22 415 5 398 3.53e-50 176
MsG0680034672.01.T01 MTR_4g085720 32.020 406 242 10 20 416 9 389 1.98e-49 173
MsG0680034672.01.T01 MTR_1g056840 29.698 431 224 13 20 415 2 388 1.01e-45 163
MsG0680034672.01.T01 MTR_1g056910 30.348 402 253 11 22 414 3 386 4.47e-42 154
MsG0680034672.01.T01 MTR_8g092870 26.651 424 280 9 18 429 3 407 6.70e-40 148
MsG0680034672.01.T01 MTR_5g015210 29.471 397 241 9 25 415 67 430 2.38e-37 142
MsG0680034672.01.T01 MTR_3g095730 27.123 424 266 15 23 429 11 408 1.17e-35 136
MsG0680034672.01.T01 MTR_4g051515 27.251 411 261 16 22 415 3 392 2.29e-33 130
MsG0680034672.01.T01 MTR_4g485520 27.361 413 249 14 18 414 99 476 1.94e-28 117
MsG0680034672.01.T01 MTR_4g485520 27.361 413 249 14 18 414 267 644 3.39e-28 117
MsG0680034672.01.T01 MTR_4g063800 28.169 426 232 17 24 422 254 632 4.82e-28 117
MsG0680034672.01.T01 MTR_1g017770 26.250 400 255 9 25 415 45 413 1.78e-27 114
MsG0680034672.01.T01 MTR_3g096370 26.699 412 268 13 18 416 3 393 1.91e-25 107
MsG0680034672.01.T01 MTR_7g078330 25.823 395 266 11 23 416 272 640 3.20e-25 108
MsG0680034672.01.T01 MTR_5g083030 25.463 432 251 10 21 417 289 684 7.05e-25 108
MsG0680034672.01.T01 MTR_1g094215 28.369 423 239 17 24 425 63 442 5.11e-23 101
MsG0680034672.01.T01 MTR_7g059405 25.122 410 252 15 24 417 263 633 7.30e-23 101
MsG0680034672.01.T01 MTR_4g028960 51.948 77 37 0 20 96 275 351 1.36e-22 101
MsG0680034672.01.T01 MTR_1g094215 28.369 423 239 17 24 425 246 625 2.51e-22 100
MsG0680034672.01.T01 MTR_2g018010 42.308 104 49 1 23 126 290 382 5.72e-21 96.3
MsG0680034672.01.T01 MTR_7g053260 34.532 139 76 2 3 141 56 179 7.39e-21 95.1
MsG0680034672.01.T01 MTR_3g085610 40.385 104 54 2 11 114 268 363 1.59e-20 94.7
MsG0680034672.01.T01 MTR_3g078160 42.529 87 50 0 10 96 260 346 2.66e-20 94.0
MsG0680034672.01.T01 MTR_3g078160 42.529 87 50 0 10 96 260 346 2.95e-20 94.0
MsG0680034672.01.T01 MTR_3g078160 42.529 87 50 0 10 96 260 346 3.42e-20 93.6
MsG0680034672.01.T01 MTR_4g107010 52.857 70 33 0 26 95 281 350 4.49e-20 93.6
MsG0680034672.01.T01 MTR_7g116600 50.617 81 36 2 26 106 79 155 1.08e-18 88.6
MsG0680034672.01.T01 MTR_8g080280 24.145 468 276 19 10 420 267 712 1.52e-18 89.0
MsG0680034672.01.T01 MTR_5g034440 53.030 66 31 0 27 92 282 347 3.22e-18 87.8
MsG0680034672.01.T01 MTR_4g091880 47.222 72 37 1 21 91 1 72 3.04e-17 83.2
MsG0680034672.01.T01 MTR_4g091880 47.222 72 37 1 21 91 1 72 3.20e-17 83.2
MsG0680034672.01.T01 MTR_1g069845 44.286 70 39 0 23 92 122 191 6.87e-17 83.6
MsG0680034672.01.T01 MTR_7g097020 46.269 67 36 0 29 95 245 311 8.23e-17 83.6
MsG0680034672.01.T01 MTR_1g069845 44.286 70 39 0 23 92 243 312 1.23e-16 82.8
MsG0680034672.01.T01 MTR_1g069845 44.286 70 39 0 23 92 239 308 1.30e-16 82.8
MsG0680034672.01.T01 MTR_1g079450 39.394 99 53 3 20 118 58 149 9.99e-16 79.3
MsG0680034672.01.T01 MTR_8g077205 41.860 86 46 2 21 106 159 240 1.96e-15 79.0
MsG0680034672.01.T01 MTR_8g077205 41.860 86 46 2 21 106 271 352 2.39e-15 79.0
MsG0680034672.01.T01 MTR_3g466220 38.272 81 50 0 15 95 223 303 4.57e-15 78.2
MsG0680034672.01.T01 MTR_3g466220 38.272 81 50 0 15 95 202 282 5.34e-15 77.8
MsG0680034672.01.T01 MTR_5g020570 39.286 84 47 2 23 106 271 350 5.00e-14 74.7
MsG0680034672.01.T01 MTR_5g020570 39.286 84 47 2 23 106 286 365 5.92e-14 74.7
MsG0680034672.01.T01 MTR_2g011140 43.750 64 36 0 28 91 18 81 6.50e-14 73.6
MsG0680034672.01.T01 MTR_7g117890 43.902 82 41 2 11 91 244 321 8.43e-14 74.3
MsG0680034672.01.T01 MTR_8g103227 46.269 67 35 1 26 91 396 462 6.36e-13 71.6
MsG0680034672.01.T01 MTR_3g096370 62.791 43 16 0 18 60 3 45 1.05e-12 68.9
MsG0680034672.01.T01 MTR_2g096850 40.000 70 42 0 22 91 586 655 1.44e-12 70.1
MsG0680034672.01.T01 MTR_2g096850 40.000 70 42 0 22 91 737 806 1.58e-12 70.1
MsG0680034672.01.T01 MTR_3g115670 42.105 76 39 1 25 95 30 105 1.75e-12 70.1
MsG0680034672.01.T01 MTR_1g093965 43.750 64 33 1 38 101 1 61 2.50e-12 66.2
MsG0680034672.01.T01 MTR_1g090320 41.463 82 39 3 16 95 510 584 3.24e-12 69.3
MsG0680034672.01.T01 MTR_1g090320 41.463 82 39 3 16 95 512 586 3.39e-12 69.3
MsG0680034672.01.T01 MTR_7g077780 39.394 66 40 0 26 91 827 892 4.21e-12 68.9
MsG0680034672.01.T01 MTR_1g093995 43.750 64 33 1 38 101 1 61 5.63e-12 65.1
MsG0680034672.01.T01 MTR_3g008270 45.455 66 35 1 26 91 731 795 7.22e-12 68.2
MsG0680034672.01.T01 MTR_5g032010 37.313 67 42 0 25 91 732 798 9.97e-12 67.4
MsG0680034672.01.T01 MTR_1g100820 37.879 66 41 0 26 91 647 712 1.79e-11 66.6
MsG0680034672.01.T01 MTR_1g100820 37.879 66 41 0 26 91 649 714 1.82e-11 66.6
MsG0680034672.01.T01 MTR_7g005940 39.726 73 41 2 25 95 595 666 8.54e-11 64.7
MsG0680034672.01.T01 MTR_7g005940 39.726 73 41 2 25 95 595 666 8.55e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034672.01.T03 AT5G37490 44.665 403 210 5 1 401 44 435 1.32e-104 316
MsG0680034672.01.T03 AT1G66160 41.523 407 211 9 1 401 46 431 1.17e-100 306
MsG0680034672.01.T03 AT1G66160 40.052 387 205 9 21 401 50 415 2.96e-88 273
MsG0680034672.01.T03 AT3G02840 40.751 346 192 8 63 401 40 379 2.25e-75 239
MsG0680034672.01.T03 AT2G35930 32.225 391 227 13 1 378 25 390 8.90e-49 171
MsG0680034672.01.T03 AT1G49780 30.233 387 249 7 1 380 27 399 1.81e-41 151
MsG0680034672.01.T03 AT3G19380 29.737 380 230 11 1 366 27 383 1.61e-39 146
MsG0680034672.01.T03 AT3G11840 28.095 420 243 13 1 377 23 426 2.47e-33 130
MsG0680034672.01.T03 AT3G52450 45.000 120 58 4 1 118 20 133 3.91e-27 112
MsG0680034672.01.T03 AT3G49810 26.943 386 239 11 1 378 77 427 5.04e-26 109
MsG0680034672.01.T03 AT5G09800 25.964 389 254 12 1 379 24 388 8.40e-25 105
MsG0680034672.01.T03 AT5G65920 26.718 393 245 11 1 385 73 430 5.94e-24 103
MsG0680034672.01.T03 AT5G65920 26.718 393 245 11 1 385 73 430 5.94e-24 103
MsG0680034672.01.T03 AT5G64660 27.041 392 256 13 1 378 23 398 4.11e-22 97.8
MsG0680034672.01.T03 AT3G18710 24.250 400 253 15 1 379 25 395 2.38e-20 92.8
MsG0680034672.01.T03 AT3G54850 26.263 396 241 14 1 380 261 621 4.79e-18 86.7
MsG0680034672.01.T03 AT1G71020 25.445 393 249 14 1 379 108 470 5.93e-18 85.9
MsG0680034672.01.T03 AT1G23030 27.179 390 237 16 1 379 254 607 6.23e-18 86.3
MsG0680034672.01.T03 AT1G71020 25.445 393 249 14 1 379 256 618 8.35e-18 85.9
MsG0680034672.01.T03 AT2G28830 26.154 390 245 14 1 376 197 557 8.65e-18 85.9
MsG0680034672.01.T03 AT3G46510 25.450 389 246 15 1 377 269 625 9.90e-16 79.7
MsG0680034672.01.T03 AT5G42340 26.316 228 132 5 1 195 303 527 3.85e-14 74.7
MsG0680034672.01.T03 AT1G10560 31.159 138 81 2 1 127 301 435 8.41e-14 73.6
MsG0680034672.01.T03 AT5G01830 45.763 59 32 0 1 59 287 345 5.28e-13 71.2
MsG0680034672.01.T03 AT1G29340 50.000 56 28 0 1 56 318 373 1.06e-12 70.1
MsG0680034672.01.T03 AT1G24330 33.600 125 68 5 1 116 288 406 2.47e-12 69.3
MsG0680034672.01.T03 AT1G24330 33.600 125 68 5 1 116 288 406 2.47e-12 69.3
MsG0680034672.01.T03 AT1G27910 37.778 90 48 3 1 88 292 375 3.34e-12 68.9
MsG0680034672.01.T03 AT3G07360 45.312 64 32 1 1 64 87 147 3.48e-12 68.2
MsG0680034672.01.T03 AT1G67530 36.145 83 44 2 1 83 285 358 1.64e-11 66.6
MsG0680034672.01.T03 AT1G67530 36.145 83 44 2 1 83 285 358 1.64e-11 66.6
MsG0680034672.01.T03 AT1G67530 36.145 83 44 2 1 83 285 358 1.64e-11 66.6
MsG0680034672.01.T03 AT1G67530 36.145 83 44 2 1 83 285 358 2.29e-11 65.9
MsG0680034672.01.T03 AT1G01680 41.379 58 34 0 1 58 246 303 2.85e-11 64.7
MsG0680034672.01.T03 AT4G36550 41.379 58 34 0 1 58 232 289 3.29e-11 65.5
MsG0680034672.01.T02 AT5G37490 45.107 419 217 5 2 418 28 435 2.03e-113 339
MsG0680034672.01.T02 AT1G66160 41.981 424 219 9 1 418 29 431 1.29e-109 329
MsG0680034672.01.T02 AT1G66160 39.623 424 213 10 1 418 29 415 6.06e-97 296
MsG0680034672.01.T02 AT3G02840 40.751 346 192 8 80 418 40 379 3.67e-75 239
MsG0680034672.01.T02 AT2G35930 32.432 407 237 12 2 395 9 390 3.27e-55 188
MsG0680034672.01.T02 AT1G49780 31.436 404 256 7 1 397 10 399 3.04e-50 175
MsG0680034672.01.T02 AT3G19380 30.867 392 244 10 1 383 10 383 1.86e-47 168
MsG0680034672.01.T02 AT3G11840 29.128 436 250 13 2 394 7 426 9.68e-41 150
MsG0680034672.01.T02 AT3G52450 46.324 136 65 4 2 135 4 133 4.89e-34 132
MsG0680034672.01.T02 AT5G09800 26.866 402 260 12 5 396 11 388 1.97e-31 124
MsG0680034672.01.T02 AT3G49810 27.820 399 245 11 5 395 64 427 2.70e-31 124
MsG0680034672.01.T02 AT5G64660 28.010 407 263 13 3 395 8 398 7.21e-30 120
MsG0680034672.01.T02 AT5G65920 27.586 406 251 11 5 402 60 430 2.95e-29 119
MsG0680034672.01.T02 AT5G65920 27.586 406 251 11 5 402 60 430 2.95e-29 119
MsG0680034672.01.T02 AT3G18710 25.060 415 261 15 3 396 10 395 1.78e-27 113
MsG0680034672.01.T02 AT3G54850 27.805 410 245 14 4 397 247 621 9.55e-26 110
MsG0680034672.01.T02 AT2G28830 27.160 405 252 14 3 393 182 557 9.76e-25 107
MsG0680034672.01.T02 AT1G71020 26.471 408 256 14 3 396 93 470 3.07e-24 104
MsG0680034672.01.T02 AT1G71020 26.471 408 256 14 3 396 241 618 6.96e-24 104
MsG0680034672.01.T02 AT1G23030 27.833 406 246 16 2 396 238 607 1.23e-23 103
MsG0680034672.01.T02 AT3G46510 26.799 403 251 15 4 394 255 625 1.95e-23 103
MsG0680034672.01.T02 AT5G42340 27.572 243 140 5 3 212 288 527 9.06e-21 95.1
MsG0680034672.01.T02 AT5G01830 51.389 72 35 0 5 76 274 345 2.11e-20 94.0
MsG0680034672.01.T02 AT1G29340 50.704 71 35 0 3 73 303 373 2.26e-19 91.3
MsG0680034672.01.T02 AT1G27910 40.385 104 54 3 4 105 278 375 4.59e-18 87.0
MsG0680034672.01.T02 AT1G24330 35.252 139 75 5 4 133 274 406 5.51e-18 87.0
MsG0680034672.01.T02 AT1G24330 35.252 139 75 5 4 133 274 406 5.51e-18 87.0
MsG0680034672.01.T02 AT3G07360 45.570 79 40 1 3 81 72 147 8.69e-18 85.5
MsG0680034672.01.T02 AT1G10560 32.414 145 84 2 11 144 294 435 1.89e-17 85.1
MsG0680034672.01.T02 AT1G67530 39.175 97 50 2 4 100 271 358 2.37e-17 85.1
MsG0680034672.01.T02 AT1G67530 39.175 97 50 2 4 100 271 358 2.37e-17 85.1
MsG0680034672.01.T02 AT1G67530 39.175 97 50 2 4 100 271 358 2.37e-17 85.1
MsG0680034672.01.T02 AT1G67530 39.423 104 59 2 4 107 271 370 3.34e-17 84.0
MsG0680034672.01.T02 AT3G54790 43.421 76 43 0 3 78 200 275 8.17e-17 83.2
MsG0680034672.01.T02 AT3G54790 43.421 76 43 0 3 78 236 311 1.19e-16 82.8
MsG0680034672.01.T02 AT3G54790 43.421 76 43 0 3 78 236 311 1.19e-16 82.8
MsG0680034672.01.T02 AT4G21350 47.222 72 37 1 1 71 1 72 3.45e-16 80.1
MsG0680034672.01.T02 AT1G01680 41.791 67 39 0 9 75 237 303 4.71e-16 79.0
MsG0680034672.01.T02 AT1G60190 32.215 149 83 4 7 144 280 421 3.55e-15 78.2
MsG0680034672.01.T02 AT4G36550 37.500 72 45 0 4 75 218 289 1.37e-14 76.3
MsG0680034672.01.T02 AT3G61390 43.939 66 37 0 6 71 279 344 3.64e-14 73.9
MsG0680034672.01.T02 AT3G61390 43.939 66 37 0 6 71 354 419 4.55e-14 73.9
MsG0680034672.01.T02 AT1G01660 38.571 70 43 0 6 75 498 567 1.48e-13 72.8
MsG0680034672.01.T02 AT1G01660 38.571 70 43 0 6 75 499 568 1.52e-13 72.8
MsG0680034672.01.T02 AT3G49060 42.424 66 38 0 6 71 726 791 1.62e-13 73.2
MsG0680034672.01.T02 AT3G49060 42.424 66 38 0 6 71 703 768 1.63e-13 73.2
MsG0680034672.01.T02 AT3G49060 42.424 66 38 0 6 71 736 801 1.69e-13 73.2
MsG0680034672.01.T02 AT2G23140 36.082 97 58 1 3 99 231 323 1.78e-13 72.8
MsG0680034672.01.T02 AT2G23140 36.082 97 58 1 3 99 228 320 1.94e-13 72.8
MsG0680034672.01.T02 AT2G23140 36.082 97 58 1 3 99 228 320 1.94e-13 72.8
MsG0680034672.01.T02 AT2G45920 42.424 66 38 0 6 71 326 391 2.00e-13 72.0
MsG0680034672.01.T02 AT2G23140 36.082 97 58 1 3 99 39 131 2.64e-13 72.4
MsG0680034672.01.T02 AT2G23140 36.082 97 58 1 3 99 39 131 2.64e-13 72.4
MsG0680034672.01.T02 AT5G67340 36.986 73 46 0 3 75 238 310 1.46e-12 70.1
MsG0680034672.01.T02 AT5G67340 36.986 73 46 0 3 75 238 310 1.46e-12 70.1
MsG0680034672.01.T02 AT5G51270 40.845 71 41 1 6 76 736 805 1.72e-12 69.7
MsG0680034672.01.T02 AT5G51270 40.845 71 41 1 6 76 736 805 1.72e-12 69.7
MsG0680034672.01.T02 AT1G56030 43.077 65 37 0 6 70 324 388 1.74e-12 68.9
MsG0680034672.01.T02 AT1G56040 41.538 65 38 0 6 70 354 418 2.81e-12 68.6
MsG0680034672.01.T02 AT5G65500 41.791 67 39 0 5 71 715 781 5.72e-12 68.2
MsG0680034672.01.T02 AT5G65500 41.791 67 39 0 5 71 723 789 6.01e-12 68.2
MsG0680034672.01.T02 AT1G01670 40.909 66 39 0 6 71 211 276 9.90e-12 65.9
MsG0680034672.01.T02 AT1G01670 40.909 66 39 0 6 71 295 360 1.56e-11 65.9
MsG0680034672.01.T02 AT1G01670 40.909 66 39 0 6 71 295 360 1.56e-11 65.9
MsG0680034672.01.T02 AT5G18340 33.673 98 58 3 3 100 72 162 9.22e-11 63.9
MsG0680034672.01.T01 AT5G37490 43.891 442 229 6 5 438 5 435 3.80e-114 342
MsG0680034672.01.T01 AT1G66160 41.981 424 219 9 21 438 29 431 4.17e-109 329
MsG0680034672.01.T01 AT1G66160 39.623 424 213 10 21 438 29 415 2.16e-96 296
MsG0680034672.01.T01 AT3G02840 40.751 346 192 8 100 438 40 379 8.83e-75 239
MsG0680034672.01.T01 AT2G35930 32.930 413 239 13 16 415 3 390 5.85e-56 191
MsG0680034672.01.T01 AT1G49780 31.436 404 256 7 20 416 9 398 3.16e-50 176
MsG0680034672.01.T01 AT3G19380 30.789 393 245 10 20 403 9 383 2.18e-47 168
MsG0680034672.01.T01 AT3G11840 29.128 436 250 13 22 414 7 426 1.81e-40 150
MsG0680034672.01.T01 AT3G52450 45.652 138 67 4 20 155 2 133 5.19e-34 132
MsG0680034672.01.T01 AT5G09800 26.866 402 260 12 25 416 11 388 2.97e-31 124
MsG0680034672.01.T01 AT3G49810 27.340 406 252 11 25 422 64 434 3.09e-31 125
MsG0680034672.01.T01 AT5G64660 27.845 413 268 13 18 416 3 399 4.48e-30 121
MsG0680034672.01.T01 AT5G65920 27.586 406 251 11 25 422 60 430 2.61e-29 119
MsG0680034672.01.T01 AT5G65920 27.586 406 251 11 25 422 60 430 2.61e-29 119
MsG0680034672.01.T01 AT3G18710 25.301 415 260 15 23 416 10 395 2.87e-27 113
MsG0680034672.01.T01 AT3G54850 27.805 410 245 14 24 417 247 621 2.86e-25 108
MsG0680034672.01.T01 AT2G28830 27.160 405 252 14 23 413 182 557 1.45e-24 106
MsG0680034672.01.T01 AT1G23030 27.885 416 253 16 12 416 228 607 2.70e-24 106
MsG0680034672.01.T01 AT1G71020 26.014 419 266 14 12 416 82 470 3.48e-24 105
MsG0680034672.01.T01 AT1G71020 26.265 415 270 13 12 416 230 618 6.69e-24 105
MsG0680034672.01.T01 AT3G46510 26.179 424 268 16 3 414 235 625 2.70e-23 103
MsG0680034672.01.T01 AT5G42340 27.381 252 147 5 14 232 279 527 3.06e-21 97.1
MsG0680034672.01.T01 AT5G01830 51.389 72 35 0 25 96 274 345 3.23e-20 94.0
MsG0680034672.01.T01 AT1G29340 50.704 71 35 0 23 93 303 373 3.07e-19 90.9
MsG0680034672.01.T01 AT1G67530 35.200 125 66 3 2 120 243 358 2.54e-18 88.2
MsG0680034672.01.T01 AT1G67530 35.200 125 66 3 2 120 243 358 2.54e-18 88.2
MsG0680034672.01.T01 AT1G67530 35.200 125 66 3 2 120 243 358 2.54e-18 88.2
MsG0680034672.01.T01 AT1G67530 35.606 132 75 3 2 127 243 370 3.01e-18 87.4
MsG0680034672.01.T01 AT1G27910 37.391 115 64 3 14 126 268 376 5.29e-18 87.0
MsG0680034672.01.T01 AT1G24330 32.934 167 91 6 2 153 246 406 5.35e-18 87.0
MsG0680034672.01.T01 AT1G24330 32.934 167 91 6 2 153 246 406 5.35e-18 87.0
MsG0680034672.01.T01 AT3G07360 45.570 79 40 1 23 101 72 147 1.17e-17 85.5
MsG0680034672.01.T01 AT1G10560 32.414 145 84 2 31 164 294 435 2.21e-17 85.1
MsG0680034672.01.T01 AT3G54790 43.421 76 43 0 23 98 200 275 9.67e-17 83.2
MsG0680034672.01.T01 AT1G01680 37.931 87 49 1 9 95 222 303 1.32e-16 80.9
MsG0680034672.01.T01 AT3G54790 43.421 76 43 0 23 98 236 311 1.38e-16 82.8
MsG0680034672.01.T01 AT3G54790 43.421 76 43 0 23 98 236 311 1.38e-16 82.8
MsG0680034672.01.T01 AT4G21350 47.222 72 37 1 21 91 1 72 3.72e-16 80.1
MsG0680034672.01.T01 AT1G60190 32.215 149 83 4 27 164 280 421 3.07e-15 78.6
MsG0680034672.01.T01 AT4G36550 37.500 72 45 0 24 95 218 289 1.99e-14 75.9
MsG0680034672.01.T01 AT3G61390 43.939 66 37 0 26 91 279 344 3.78e-14 73.9
MsG0680034672.01.T01 AT3G61390 43.939 66 37 0 26 91 354 419 5.49e-14 73.9
MsG0680034672.01.T01 AT2G23140 36.082 97 58 1 23 119 228 320 1.53e-13 73.2
MsG0680034672.01.T01 AT2G23140 36.082 97 58 1 23 119 228 320 1.53e-13 73.2
MsG0680034672.01.T01 AT2G23140 36.082 97 58 1 23 119 231 323 1.60e-13 73.2
MsG0680034672.01.T01 AT3G49060 42.424 66 38 0 26 91 703 768 1.60e-13 73.2
MsG0680034672.01.T01 AT3G49060 42.424 66 38 0 26 91 726 791 1.64e-13 73.2
MsG0680034672.01.T01 AT3G49060 42.424 66 38 0 26 91 736 801 1.65e-13 73.2
MsG0680034672.01.T01 AT1G01660 38.571 70 43 0 26 95 498 567 1.93e-13 72.8
MsG0680034672.01.T01 AT1G01660 38.571 70 43 0 26 95 499 568 1.93e-13 72.8
MsG0680034672.01.T01 AT2G23140 36.082 97 58 1 23 119 39 131 1.94e-13 72.8
MsG0680034672.01.T01 AT2G23140 36.082 97 58 1 23 119 39 131 1.94e-13 72.8
MsG0680034672.01.T01 AT2G45920 42.424 66 38 0 26 91 326 391 2.20e-13 72.0
MsG0680034672.01.T01 AT1G56040 38.824 85 51 1 7 90 334 418 1.36e-12 69.7
MsG0680034672.01.T01 AT5G67340 36.986 73 46 0 23 95 238 310 1.41e-12 70.1
MsG0680034672.01.T01 AT5G67340 36.986 73 46 0 23 95 238 310 1.41e-12 70.1
MsG0680034672.01.T01 AT1G56030 43.077 65 37 0 26 90 324 388 1.97e-12 68.9
MsG0680034672.01.T01 AT5G51270 40.845 71 41 1 26 96 736 805 2.24e-12 69.7
MsG0680034672.01.T01 AT5G51270 40.845 71 41 1 26 96 736 805 2.24e-12 69.7
MsG0680034672.01.T01 AT5G65500 41.333 75 41 1 17 91 718 789 2.48e-12 69.7
MsG0680034672.01.T01 AT5G65500 41.333 75 41 1 17 91 710 781 2.67e-12 69.3
MsG0680034672.01.T01 AT1G01670 40.909 66 39 0 26 91 211 276 1.25e-11 65.5
MsG0680034672.01.T01 AT1G01670 40.909 66 39 0 26 91 295 360 2.05e-11 65.5
MsG0680034672.01.T01 AT1G01670 40.909 66 39 0 26 91 295 360 2.05e-11 65.5
MsG0680034672.01.T01 AT5G18340 33.028 109 66 4 12 120 61 162 6.33e-11 64.7

Find 55 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAAAGCTTTAACTATTT+TGG 0.084598 6:-92593429 MsG0680034672.01.T01:CDS
AATATTCTGTTTCTTCTATT+TGG 0.146656 6:-92593301 MsG0680034672.01.T01:CDS
TCAAATTGATGAATCCTTAT+AGG 0.188148 6:-92593139 MsG0680034672.01.T01:CDS
AATCATCATTGAGGATAATT+TGG 0.200592 6:-92593565 MsG0680034672.01.T01:CDS
TTCATCAAATCAAGAGTAAT+TGG 0.206017 6:+92594283 None:intergenic
CAAATTGATGAATCCTTATA+GGG 0.287604 6:-92593138 MsG0680034672.01.T01:CDS
ATTGGACACCTAAATTGATT+TGG 0.290295 6:+92594301 None:intergenic
TAGTGATTCCAAATCAATTT+AGG 0.292355 6:-92594309 MsG0680034672.01.T01:CDS
TGATTCCAAATCATTCTCTT+AGG 0.293043 6:-92594144 MsG0680034672.01.T01:CDS
TTAAAAGAGATTCTTTCTTT+TGG 0.306303 6:-92593683 MsG0680034672.01.T01:CDS
TGACTTAACAATTCCTTTGT+TGG 0.326123 6:-92593360 MsG0680034672.01.T01:CDS
AAGTTCAGTTGCTTTATCTT+TGG 0.334075 6:+92593163 None:intergenic
TCTTCCAATTCAGCCCTATA+AGG 0.335630 6:+92593125 None:intergenic
CTTCTTTACATTGCATGGTT+TGG 0.340089 6:-92593754 MsG0680034672.01.T01:CDS
GAAACATGTAGAAGCACTTA+TGG 0.341465 6:-92593654 MsG0680034672.01.T01:CDS
GTTTAAGATGGTGTTAGGTT+GGG 0.345500 6:-92594383 None:intergenic
ATTTGGAAGATGTGCAAATA+TGG 0.346804 6:-92593284 MsG0680034672.01.T01:CDS
GAATCCTTATAGGGCTGAAT+TGG 0.347326 6:-92593129 MsG0680034672.01.T01:CDS
TTTGAAGCATCAAGATGTTA+AGG 0.349669 6:-92593729 MsG0680034672.01.T01:CDS
TGTTTAAGATGGTGTTAGGT+TGG 0.352531 6:-92594384 None:intergenic
AAAGTGTTTAAGATGGTGTT+AGG 0.352803 6:-92594388 None:intergenic
ATCGGGCTAACCGGTATTCT+TGG 0.354451 6:+92594061 None:intergenic
GCAAAAGGTTTGGATCAATA+TGG 0.357148 6:-92594001 MsG0680034672.01.T01:CDS
TTCATTTGTAGAATTGGGTT+TGG 0.379894 6:-92593498 MsG0680034672.01.T01:CDS
TTCAATACTCTCTCTATCAT+AGG 0.380174 6:+92594231 None:intergenic
GGAATCACTACCTCCATGTT+TGG 0.382791 6:+92594322 None:intergenic
TGGTGTTAGGTTGGGGAAGA+AGG 0.382817 6:-92594375 MsG0680034672.01.T01:CDS
ATTATCCTAAGAGAATGATT+TGG 0.383748 6:+92594139 None:intergenic
TCAATATGGTTGTATTGAAT+TGG 0.405007 6:-92593987 MsG0680034672.01.T01:CDS
TAAGGAATCAGCAAAAGGTT+TGG 0.411626 6:-92594011 MsG0680034672.01.T01:CDS
TTGAAGCATCAAGATGTTAA+GGG 0.415181 6:-92593728 MsG0680034672.01.T01:CDS
TTAGGATAATGATTCAAGAT+TGG 0.432186 6:-92594126 MsG0680034672.01.T01:CDS
GAAACATCGATCGGGCTAAC+CGG 0.433322 6:+92594052 None:intergenic
AAAAGCTTCTTTACATTGCA+TGG 0.440899 6:-92593759 MsG0680034672.01.T01:CDS
CGAGTTAAGGAATCAGCAAA+AGG 0.455195 6:-92594016 MsG0680034672.01.T01:CDS
GATCCTGTGACATTGTCAAC+AGG 0.477744 6:-92594259 MsG0680034672.01.T01:CDS
TTTAAGATGGTGTTAGGTTG+GGG 0.480803 6:-92594382 None:intergenic
TGTGTTGAGAATAGACAAAA+TGG 0.498744 6:-92594103 MsG0680034672.01.T01:CDS
ATTGAAAGATGGTTCAATGA+AGG 0.518770 6:-92594214 MsG0680034672.01.T01:CDS
ATAGAGAGAGTATTGAAAGA+TGG 0.521682 6:-92594225 MsG0680034672.01.T01:CDS
CTATTATTGGTATTGCAAGT+TGG 0.529827 6:-92593200 MsG0680034672.01.T01:CDS
GAAGCACTTATGGAAATTGA+AGG 0.535964 6:-92593644 MsG0680034672.01.T01:CDS
ATTCCTGTTGACAATGTCAC+AGG 0.541677 6:+92594256 None:intergenic
ACAGAATATTCTGTAGTCAA+AGG 0.553879 6:+92593314 None:intergenic
CAAAGGTGGAAAACCAAACA+TGG 0.558197 6:-92594335 MsG0680034672.01.T01:CDS
TTGATTGAAGCACTTCAAGT+TGG 0.561935 6:-92593236 MsG0680034672.01.T01:CDS
GATTCCTACTCCAAGAATAC+CGG 0.564162 6:-92594071 MsG0680034672.01.T01:CDS
GAAGCTCGGAAACATCGATC+GGG 0.578922 6:+92594044 None:intergenic
CTTACAACTTGATTTGTGAG+AGG 0.581086 6:+92594178 None:intergenic
TAATCACAAAATCATCATTG+AGG 0.586969 6:-92593574 MsG0680034672.01.T01:CDS
CTAACCGGTATTCTTGGAGT+AGG 0.590630 6:+92594067 None:intergenic
AGAAGCTCGGAAACATCGAT+CGG 0.598207 6:+92594043 None:intergenic
AATGGAGTAATGAAAGTGAG+AGG 0.609225 6:-92593949 MsG0680034672.01.T01:CDS
ATAGACAAAATGGTGTTGAG+AGG 0.615873 6:-92594093 MsG0680034672.01.T01:CDS
AGGTGGAAAACCAAACATGG+AGG 0.758131 6:-92594332 MsG0680034672.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTCATTTGTAGAATT+GGG - Chr6:92593955-92593974 MsG0680034672.01.T01:CDS 15.0%
!!! TTTTTCATTGAAATTAGAAT+TGG + Chr6:92593932-92593951 None:intergenic 15.0%
!!! AATATTCTGTTTCTTCTATT+TGG - Chr6:92594157-92594176 MsG0680034672.01.T01:CDS 20.0%
!!! AATGATGATTTTGTGATTAT+TGG + Chr6:92593883-92593902 None:intergenic 20.0%
!!! GAAATTTTCATTTGTAGAAT+TGG - Chr6:92593954-92593973 MsG0680034672.01.T01:CDS 20.0%
!!! TATTGAATTGGTTCAAAAAA+TGG - Chr6:92593483-92593502 MsG0680034672.01.T01:CDS 20.0%
!!! TTAAAAGAGATTCTTTCTTT+TGG - Chr6:92593775-92593794 MsG0680034672.01.T01:CDS 20.0%
! AAAAAATGCATAGTTGAGAA+TGG - Chr6:92593535-92593554 MsG0680034672.01.T01:CDS 25.0%
! AAGAACAAGAAAAACAACAA+AGG - Chr6:92593106-92593125 MsG0680034672.01.T01:CDS 25.0%
! AATCATCATTGAGGATAATT+TGG - Chr6:92593893-92593912 MsG0680034672.01.T01:CDS 25.0%
! ATTATCCTAAGAGAATGATT+TGG + Chr6:92593322-92593341 None:intergenic 25.0%
! CAAATTGATGAATCCTTATA+GGG - Chr6:92594320-92594339 MsG0680034672.01.T01:CDS 25.0%
! TAATCACAAAATCATCATTG+AGG - Chr6:92593884-92593903 MsG0680034672.01.T01:CDS 25.0%
! TAGTGATTCCAAATCAATTT+AGG - Chr6:92593149-92593168 MsG0680034672.01.T01:CDS 25.0%
! TATGGTGACAAAAATTATGA+AGG - Chr6:92594192-92594211 MsG0680034672.01.T01:CDS 25.0%
! TCAAATTGATGAATCCTTAT+AGG - Chr6:92594319-92594338 MsG0680034672.01.T01:CDS 25.0%
! TCAATATGGTTGTATTGAAT+TGG - Chr6:92593471-92593490 MsG0680034672.01.T01:CDS 25.0%
! TTAGAAGCTCAAAAATCTTT+AGG - Chr6:92593673-92593692 MsG0680034672.01.T01:CDS 25.0%
! TTAGGATAATGATTCAAGAT+TGG - Chr6:92593332-92593351 MsG0680034672.01.T01:CDS 25.0%
! TTCATCAAATCAAGAGTAAT+TGG + Chr6:92593178-92593197 None:intergenic 25.0%
!! TGATTTTATCAGCACTTAAT+TGG - Chr6:92593635-92593654 MsG0680034672.01.T01:CDS 25.0%
!!! AAGATTTTTTTGACCAACAA+AGG + Chr6:92594114-92594133 None:intergenic 25.0%
!!! TGAGAAAGCTTTAACTATTT+TGG - Chr6:92594029-92594048 MsG0680034672.01.T01:CDS 25.0%
AAAAGCTTCTTTACATTGCA+TGG - Chr6:92593699-92593718 MsG0680034672.01.T01:CDS 30.0%
AACAAGAAAAACAACAAAGG+TGG - Chr6:92593109-92593128 MsG0680034672.01.T01:CDS 30.0%
ACAGAATATTCTGTAGTCAA+AGG + Chr6:92594147-92594166 None:intergenic 30.0%
ATTGAAAGATGGTTCAATGA+AGG - Chr6:92593244-92593263 MsG0680034672.01.T01:CDS 30.0%
ATTGGACACCTAAATTGATT+TGG + Chr6:92593160-92593179 None:intergenic 30.0%
ATTTGGAAGATGTGCAAATA+TGG - Chr6:92594174-92594193 MsG0680034672.01.T01:CDS 30.0%
CTATTATTGGTATTGCAAGT+TGG - Chr6:92594258-92594277 MsG0680034672.01.T01:CDS 30.0%
TGACTTAACAATTCCTTTGT+TGG - Chr6:92594098-92594117 MsG0680034672.01.T01:CDS 30.0%
TGATTCCAAATCATTCTCTT+AGG - Chr6:92593314-92593333 MsG0680034672.01.T01:CDS 30.0%
TGGTTCAAAAAATGGAGAAA+TGG - Chr6:92593491-92593510 MsG0680034672.01.T01:CDS 30.0%
TGTGTTGAGAATAGACAAAA+TGG - Chr6:92593355-92593374 MsG0680034672.01.T01:CDS 30.0%
TTCAATACTCTCTCTATCAT+AGG + Chr6:92593230-92593249 None:intergenic 30.0%
TTCATTTGTAGAATTGGGTT+TGG - Chr6:92593960-92593979 MsG0680034672.01.T01:CDS 30.0%
! AAGTTCAGTTGCTTTATCTT+TGG + Chr6:92594298-92594317 None:intergenic 30.0%
! TGCTTTTCAGAAGCTATTAT+TGG - Chr6:92594245-92594264 MsG0680034672.01.T01:CDS 30.0%
! TTGAAGCATCAAGATGTTAA+GGG - Chr6:92593730-92593749 MsG0680034672.01.T01:CDS 30.0%
! TTTGAAGCATCAAGATGTTA+AGG - Chr6:92593729-92593748 MsG0680034672.01.T01:CDS 30.0%
! TTTTGAGCTTCTAATTGAAG+TGG + Chr6:92593667-92593686 None:intergenic 30.0%
!! ATAGAGAGAGTATTGAAAGA+TGG - Chr6:92593233-92593252 MsG0680034672.01.T01:CDS 30.0%
AATGGAGTAATGAAAGTGAG+AGG - Chr6:92593509-92593528 MsG0680034672.01.T01:CDS 35.0%
CTTAACTCGAAAAAGAAGCT+CGG + Chr6:92593431-92593450 None:intergenic 35.0%
CTTCTTTACATTGCATGGTT+TGG - Chr6:92593704-92593723 MsG0680034672.01.T01:CDS 35.0%
GCAAAAGGTTTGGATCAATA+TGG - Chr6:92593457-92593476 MsG0680034672.01.T01:CDS 35.0%
TAAGGAATCAGCAAAAGGTT+TGG - Chr6:92593447-92593466 MsG0680034672.01.T01:CDS 35.0%
! ATAGACAAAATGGTGTTGAG+AGG - Chr6:92593365-92593384 MsG0680034672.01.T01:CDS 35.0%
! GAAGCACTTATGGAAATTGA+AGG - Chr6:92593814-92593833 MsG0680034672.01.T01:CDS 35.0%
! TTGATTGAAGCACTTCAAGT+TGG - Chr6:92594222-92594241 MsG0680034672.01.T01:CDS 35.0%
!! CTTACAACTTGATTTGTGAG+AGG + Chr6:92593283-92593302 None:intergenic 35.0%
!! GAAACATGTAGAAGCACTTA+TGG - Chr6:92593804-92593823 MsG0680034672.01.T01:CDS 35.0%
ATTCCTGTTGACAATGTCAC+AGG + Chr6:92593205-92593224 None:intergenic 40.0%
CAAAGGTGGAAAACCAAACA+TGG - Chr6:92593123-92593142 MsG0680034672.01.T01:CDS 40.0%
CGAGTTAAGGAATCAGCAAA+AGG - Chr6:92593442-92593461 MsG0680034672.01.T01:CDS 40.0%
GAATCCTTATAGGGCTGAAT+TGG - Chr6:92594329-92594348 MsG0680034672.01.T01:CDS 40.0%
GATTCCTACTCCAAGAATAC+CGG - Chr6:92593387-92593406 MsG0680034672.01.T01:CDS 40.0%
TCTTCCAATTCAGCCCTATA+AGG + Chr6:92594336-92594355 None:intergenic 40.0%
!!! CGAGCTTCTTTTTCGAGTTA+AGG - Chr6:92593429-92593448 MsG0680034672.01.T01:CDS 40.0%
AGAAGCTCGGAAACATCGAT+CGG + Chr6:92593418-92593437 None:intergenic 45.0%
AGGTGGAAAACCAAACATGG+AGG - Chr6:92593126-92593145 MsG0680034672.01.T01:CDS 45.0%
CTAACCGGTATTCTTGGAGT+AGG + Chr6:92593394-92593413 None:intergenic 45.0%
GATCCTGTGACATTGTCAAC+AGG - Chr6:92593199-92593218 MsG0680034672.01.T01:CDS 45.0%
GGAATCACTACCTCCATGTT+TGG + Chr6:92593139-92593158 None:intergenic 45.0%
ATCGGGCTAACCGGTATTCT+TGG + Chr6:92593400-92593419 None:intergenic 50.0%
GAAACATCGATCGGGCTAAC+CGG + Chr6:92593409-92593428 None:intergenic 50.0%
GAAGCTCGGAAACATCGATC+GGG + Chr6:92593417-92593436 None:intergenic 50.0%
!! TGGTGTTAGGTTGGGGAAGA+AGG - Chr6:92593083-92593102 MsG0680034672.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr6 gene 92593082 92594398 92593082 ID=MsG0680034672.01;Name=MsG0680034672.01
Chr6 mRNA 92593082 92594398 92593082 ID=MsG0680034672.01.T01;Parent=MsG0680034672.01;Name=MsG0680034672.01.T01;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|438
Chr6 exon 92593082 92594398 92593082 ID=MsG0680034672.01.T01:exon:12877;Parent=MsG0680034672.01.T01
Chr6 CDS 92593082 92594398 92593082 ID=MsG0680034672.01.T01:cds;Parent=MsG0680034672.01.T01
Chr6 mRNA 92593082 92594338 92593082 ID=MsG0680034672.01.T02;Parent=MsG0680034672.01;Name=MsG0680034672.01.T02;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|0|1|0|418
Chr6 exon 92593082 92594338 92593082 ID=MsG0680034672.01.T02:exon:12878;Parent=MsG0680034672.01.T02
Chr6 CDS 92593082 92594338 92593082 ID=MsG0680034672.01.T02:cds;Parent=MsG0680034672.01.T02
Chr6 mRNA 92593082 92594287 92593082 ID=MsG0680034672.01.T03;Parent=MsG0680034672.01;Name=MsG0680034672.01.T03;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|0|1|0|401
Chr6 exon 92593082 92594287 92593082 ID=MsG0680034672.01.T03:exon:12879;Parent=MsG0680034672.01.T03
Chr6 CDS 92593082 92594287 92593082 ID=MsG0680034672.01.T03:cds;Parent=MsG0680034672.01.T03
Gene Sequence

>MsG0680034672.01.T03

ATGAAAGATCCTGTGACATTGTCAACAGGAATAACCTATGATAGAGAGAGTATTGAAAGATGGTTCAATGAAGGAAACTATACATGTCCTCTCACAAATCAAGTTGTAAGAAACTTTGATATGATTCCAAATCATTCTCTTAGGATAATGATTCAAGATTGGTGTGTTGAGAATAGACAAAATGGTGTTGAGAGGATTCCTACTCCAAGAATACCGGTTAGCCCGATCGATGTTTCCGAGCTTCTTTTTCGAGTTAAGGAATCAGCAAAAGGTTTGGATCAATATGGTTGTATTGAATTGGTTCAAAAAATGGAGAAATGGAGTAATGAAAGTGAGAGGAACAAAAAATGCATAGTTGAGAATGGAGCAACTAGTGCATTAGCTTTAGCATTTGATGCTTTTGCTAATGATTCTATTGAGAAAAATGTTATTGTTCTTGAAGTGATTTTATCAGCACTTAATTGGATGTTTCCACTTCAATTAGAAGCTCAAAAATCTTTAGGTTCAAAAGCTTCTTTACATTGCATGGTTTGGTTTTTGAAGCATCAAGATGTTAAGGGAAAAGAAAAAGCTATTATTGCATTAAAAGAGATTCTTTCTTTTGGTGATGAGAAACATGTAGAAGCACTTATGGAAATTGAAGGAGTTAATGAGCTTTTAATTGAGTTCATTAACAAGAGAATTAGTCCAATAATCACAAAATCATCATTGAGGATAATTTGGTACTTAGTTTCATCCAATTCTAATTTCAATGAAAAAATGAAATTTTCATTTGTAGAATTGGGTTTGGTTTCTTCAATTTTGCACATTCTTATTGACTCAGAAAAAAGCACTTGTGAGAAAGCTTTAACTATTTTGGATTCTTTATTAAGCTGTGACTTTGCAAGAGAAACAGCTTATGAAAATGACTTAACAATTCCTTTGTTGGTCAAAAAAATCTTGAGAGTTTCACCTTTGACTACAGAATATTCTGTTTCTTCTATTTGGAAGATGTGCAAATATGGTGACAAAAATTATGAAGGAAAAGCTTTGATTGAAGCACTTCAAGTTGGTGCTTTTCAGAAGCTATTATTGGTATTGCAAGTTGGTTGTAATGATGAGACCAAAGATAAAGCAACTGAACTTCTCAAATTGATGAATCCTTATAGGGCTGAATTGGAAGATTGTGTTGATTCAGATTTCAAGAATCTTAAGAGATCATATTAA

>MsG0680034672.01.T02

ATGGAGGTAGTGATTCCAAATCAATTTAGGTGTCCAATTACTCTTGATTTGATGAAAGATCCTGTGACATTGTCAACAGGAATAACCTATGATAGAGAGAGTATTGAAAGATGGTTCAATGAAGGAAACTATACATGTCCTCTCACAAATCAAGTTGTAAGAAACTTTGATATGATTCCAAATCATTCTCTTAGGATAATGATTCAAGATTGGTGTGTTGAGAATAGACAAAATGGTGTTGAGAGGATTCCTACTCCAAGAATACCGGTTAGCCCGATCGATGTTTCCGAGCTTCTTTTTCGAGTTAAGGAATCAGCAAAAGGTTTGGATCAATATGGTTGTATTGAATTGGTTCAAAAAATGGAGAAATGGAGTAATGAAAGTGAGAGGAACAAAAAATGCATAGTTGAGAATGGAGCAACTAGTGCATTAGCTTTAGCATTTGATGCTTTTGCTAATGATTCTATTGAGAAAAATGTTATTGTTCTTGAAGTGATTTTATCAGCACTTAATTGGATGTTTCCACTTCAATTAGAAGCTCAAAAATCTTTAGGTTCAAAAGCTTCTTTACATTGCATGGTTTGGTTTTTGAAGCATCAAGATGTTAAGGGAAAAGAAAAAGCTATTATTGCATTAAAAGAGATTCTTTCTTTTGGTGATGAGAAACATGTAGAAGCACTTATGGAAATTGAAGGAGTTAATGAGCTTTTAATTGAGTTCATTAACAAGAGAATTAGTCCAATAATCACAAAATCATCATTGAGGATAATTTGGTACTTAGTTTCATCCAATTCTAATTTCAATGAAAAAATGAAATTTTCATTTGTAGAATTGGGTTTGGTTTCTTCAATTTTGCACATTCTTATTGACTCAGAAAAAAGCACTTGTGAGAAAGCTTTAACTATTTTGGATTCTTTATTAAGCTGTGACTTTGCAAGAGAAACAGCTTATGAAAATGACTTAACAATTCCTTTGTTGGTCAAAAAAATCTTGAGAGTTTCACCTTTGACTACAGAATATTCTGTTTCTTCTATTTGGAAGATGTGCAAATATGGTGACAAAAATTATGAAGGAAAAGCTTTGATTGAAGCACTTCAAGTTGGTGCTTTTCAGAAGCTATTATTGGTATTGCAAGTTGGTTGTAATGATGAGACCAAAGATAAAGCAACTGAACTTCTCAAATTGATGAATCCTTATAGGGCTGAATTGGAAGATTGTGTTGATTCAGATTTCAAGAATCTTAAGAGATCATATTAA

>MsG0680034672.01.T01

ATGGTGTTAGGTTGGGGAAGAAGGAAGAACAAGAAAAACAACAAAGGTGGAAAACCAAACATGGAGGTAGTGATTCCAAATCAATTTAGGTGTCCAATTACTCTTGATTTGATGAAAGATCCTGTGACATTGTCAACAGGAATAACCTATGATAGAGAGAGTATTGAAAGATGGTTCAATGAAGGAAACTATACATGTCCTCTCACAAATCAAGTTGTAAGAAACTTTGATATGATTCCAAATCATTCTCTTAGGATAATGATTCAAGATTGGTGTGTTGAGAATAGACAAAATGGTGTTGAGAGGATTCCTACTCCAAGAATACCGGTTAGCCCGATCGATGTTTCCGAGCTTCTTTTTCGAGTTAAGGAATCAGCAAAAGGTTTGGATCAATATGGTTGTATTGAATTGGTTCAAAAAATGGAGAAATGGAGTAATGAAAGTGAGAGGAACAAAAAATGCATAGTTGAGAATGGAGCAACTAGTGCATTAGCTTTAGCATTTGATGCTTTTGCTAATGATTCTATTGAGAAAAATGTTATTGTTCTTGAAGTGATTTTATCAGCACTTAATTGGATGTTTCCACTTCAATTAGAAGCTCAAAAATCTTTAGGTTCAAAAGCTTCTTTACATTGCATGGTTTGGTTTTTGAAGCATCAAGATGTTAAGGGAAAAGAAAAAGCTATTATTGCATTAAAAGAGATTCTTTCTTTTGGTGATGAGAAACATGTAGAAGCACTTATGGAAATTGAAGGAGTTAATGAGCTTTTAATTGAGTTCATTAACAAGAGAATTAGTCCAATAATCACAAAATCATCATTGAGGATAATTTGGTACTTAGTTTCATCCAATTCTAATTTCAATGAAAAAATGAAATTTTCATTTGTAGAATTGGGTTTGGTTTCTTCAATTTTGCACATTCTTATTGACTCAGAAAAAAGCACTTGTGAGAAAGCTTTAACTATTTTGGATTCTTTATTAAGCTGTGACTTTGCAAGAGAAACAGCTTATGAAAATGACTTAACAATTCCTTTGTTGGTCAAAAAAATCTTGAGAGTTTCACCTTTGACTACAGAATATTCTGTTTCTTCTATTTGGAAGATGTGCAAATATGGTGACAAAAATTATGAAGGAAAAGCTTTGATTGAAGCACTTCAAGTTGGTGCTTTTCAGAAGCTATTATTGGTATTGCAAGTTGGTTGTAATGATGAGACCAAAGATAAAGCAACTGAACTTCTCAAATTGATGAATCCTTATAGGGCTGAATTGGAAGATTGTGTTGATTCAGATTTCAAGAATCTTAAGAGATCATATTAA

Protein sequence

>MsG0680034672.01.T03

MKDPVTLSTGITYDRESIERWFNEGNYTCPLTNQVVRNFDMIPNHSLRIMIQDWCVENRQNGVERIPTPRIPVSPIDVSELLFRVKESAKGLDQYGCIELVQKMEKWSNESERNKKCIVENGATSALALAFDAFANDSIEKNVIVLEVILSALNWMFPLQLEAQKSLGSKASLHCMVWFLKHQDVKGKEKAIIALKEILSFGDEKHVEALMEIEGVNELLIEFINKRISPIITKSSLRIIWYLVSSNSNFNEKMKFSFVELGLVSSILHILIDSEKSTCEKALTILDSLLSCDFARETAYENDLTIPLLVKKILRVSPLTTEYSVSSIWKMCKYGDKNYEGKALIEALQVGAFQKLLLVLQVGCNDETKDKATELLKLMNPYRAELEDCVDSDFKNLKRSY*

>MsG0680034672.01.T02

MEVVIPNQFRCPITLDLMKDPVTLSTGITYDRESIERWFNEGNYTCPLTNQVVRNFDMIPNHSLRIMIQDWCVENRQNGVERIPTPRIPVSPIDVSELLFRVKESAKGLDQYGCIELVQKMEKWSNESERNKKCIVENGATSALALAFDAFANDSIEKNVIVLEVILSALNWMFPLQLEAQKSLGSKASLHCMVWFLKHQDVKGKEKAIIALKEILSFGDEKHVEALMEIEGVNELLIEFINKRISPIITKSSLRIIWYLVSSNSNFNEKMKFSFVELGLVSSILHILIDSEKSTCEKALTILDSLLSCDFARETAYENDLTIPLLVKKILRVSPLTTEYSVSSIWKMCKYGDKNYEGKALIEALQVGAFQKLLLVLQVGCNDETKDKATELLKLMNPYRAELEDCVDSDFKNLKRSY*

>MsG0680034672.01.T01

MVLGWGRRKNKKNNKGGKPNMEVVIPNQFRCPITLDLMKDPVTLSTGITYDRESIERWFNEGNYTCPLTNQVVRNFDMIPNHSLRIMIQDWCVENRQNGVERIPTPRIPVSPIDVSELLFRVKESAKGLDQYGCIELVQKMEKWSNESERNKKCIVENGATSALALAFDAFANDSIEKNVIVLEVILSALNWMFPLQLEAQKSLGSKASLHCMVWFLKHQDVKGKEKAIIALKEILSFGDEKHVEALMEIEGVNELLIEFINKRISPIITKSSLRIIWYLVSSNSNFNEKMKFSFVELGLVSSILHILIDSEKSTCEKALTILDSLLSCDFARETAYENDLTIPLLVKKILRVSPLTTEYSVSSIWKMCKYGDKNYEGKALIEALQVGAFQKLLLVLQVGCNDETKDKATELLKLMNPYRAELEDCVDSDFKNLKRSY*