Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041299.01.T01 | XP_013450220.1 | 98.812 | 421 | 4 | 1 | 1 | 420 | 1 | 421 | 0 | 852 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041299.01.T01 | Q9SVC6 | 59.361 | 438 | 153 | 7 | 1 | 417 | 1 | 434 | 2.86E-179 | 509 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041299.01.T01 | A0A072U521 | 98.812 | 421 | 4 | 1 | 1 | 420 | 1 | 421 | 0.0 | 852 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048345.01 | MsG0780041299.01 | 0.848695 | 5.204093e-60 | 9.630621e-57 |
MsG0080048347.01 | MsG0780041299.01 | 0.809378 | 1.949020e-50 | 1.142538e-47 |
MsG0080048348.01 | MsG0780041299.01 | 0.826599 | 2.483257e-54 | 2.339342e-51 |
MsG0080048352.01 | MsG0780041299.01 | 0.816328 | 5.851958e-52 | 4.134340e-49 |
MsG0180000019.01 | MsG0780041299.01 | 0.810974 | 8.826631e-51 | 5.397847e-48 |
MsG0180000930.01 | MsG0780041299.01 | 0.829303 | 5.550314e-55 | 5.659317e-52 |
MsG0180001050.01 | MsG0780041299.01 | 0.841190 | 5.520459e-58 | 8.048674e-55 |
MsG0180001053.01 | MsG0780041299.01 | 0.861842 | 7.722503e-64 | 2.214757e-60 |
MsG0180003240.01 | MsG0780041299.01 | 0.844704 | 6.411983e-59 | 1.043822e-55 |
MsG0180003248.01 | MsG0780041299.01 | 0.850284 | 1.875225e-60 | 3.654754e-57 |
MsG0180003830.01 | MsG0780041299.01 | 0.802374 | 5.783016e-49 | 2.828353e-46 |
MsG0180004181.01 | MsG0780041299.01 | 0.822231 | 2.646267e-53 | 2.201865e-50 |
MsG0180004562.01 | MsG0780041299.01 | 0.852038 | 5.998543e-61 | 1.237557e-57 |
MsG0180005356.01 | MsG0780041299.01 | 0.846051 | 2.768450e-59 | 4.705936e-56 |
MsG0180005357.01 | MsG0780041299.01 | 0.841378 | 4.927476e-58 | 7.227039e-55 |
MsG0180005358.01 | MsG0780041299.01 | 0.819992 | 8.680252e-53 | 6.783857e-50 |
MsG0780040611.01 | MsG0780041299.01 | 0.837933 | 3.879582e-57 | 5.116983e-54 |
MsG0780041196.01 | MsG0780041299.01 | 0.870470 | 1.424309e-66 | 5.546967e-63 |
MsG0780041299.01 | MsG0780041316.01 | 0.810659 | 1.032567e-50 | 6.261121e-48 |
MsG0780041299.01 | MsG0780041556.01 | 0.803054 | 4.186571e-49 | 2.083135e-46 |
MsG0780041299.01 | MsG0780041574.01 | 0.803442 | 3.478512e-49 | 1.748219e-46 |
MsG0780041299.01 | MsG0880042810.01 | 0.813412 | 2.593518e-51 | 1.692549e-48 |
MsG0780041299.01 | MsG0880044305.01 | 0.800935 | 1.141383e-48 | 5.382159e-46 |
MsG0780041299.01 | MsG0880044669.01 | 0.802656 | 5.059142e-49 | 2.491946e-46 |
MsG0780041299.01 | MsG0880047486.01 | 0.825066 | 5.740982e-54 | 5.177741e-51 |
MsG0780041299.01 | MsG0880047491.01 | 0.800649 | 1.305517e-48 | 6.111517e-46 |
MsG0280011041.01 | MsG0780041299.01 | 0.820098 | 8.208023e-53 | 6.434407e-50 |
MsG0280011042.01 | MsG0780041299.01 | 0.824171 | 9.326298e-54 | 8.198316e-51 |
MsG0280011349.01 | MsG0780041299.01 | 0.822617 | 2.152287e-53 | 1.810878e-50 |
MsG0280011350.01 | MsG0780041299.01 | 0.824203 | 9.165573e-54 | 8.064288e-51 |
MsG0280011473.01 | MsG0780041299.01 | 0.847105 | 1.427357e-59 | 2.510400e-56 |
MsG0380011613.01 | MsG0780041299.01 | 0.859496 | 3.974142e-63 | 1.051650e-59 |
MsG0380013452.01 | MsG0780041299.01 | 0.803453 | 3.460694e-49 | 1.739753e-46 |
MsG0480018500.01 | MsG0780041299.01 | 0.812431 | 4.255532e-51 | 2.705385e-48 |
MsG0480018807.01 | MsG0780041299.01 | 0.811665 | 6.250109e-51 | 3.891810e-48 |
MsG0480021135.01 | MsG0780041299.01 | 0.809046 | 2.295995e-50 | 1.334001e-47 |
MsG0480022680.01 | MsG0780041299.01 | 0.819224 | 1.299636e-52 | 9.941335e-50 |
MsG0480022735.01 | MsG0780041299.01 | 0.812374 | 4.377607e-51 | 2.778561e-48 |
MsG0480022736.01 | MsG0780041299.01 | 0.861257 | 1.165005e-63 | 3.276026e-60 |
MsG0480023675.01 | MsG0780041299.01 | 0.811131 | 8.162447e-51 | 5.011864e-48 |
MsG0580024218.01 | MsG0780041299.01 | 0.809571 | 1.771351e-50 | 1.043760e-47 |
MsG0580024871.01 | MsG0780041299.01 | 0.800740 | 1.250657e-48 | 5.868180e-46 |
MsG0580025191.01 | MsG0780041299.01 | 0.846849 | 1.677098e-59 | 2.925192e-56 |
MsG0580025682.01 | MsG0780041299.01 | 0.822144 | 2.772372e-53 | 2.301078e-50 |
MsG0380015488.01 | MsG0780041299.01 | 0.812393 | 4.335806e-51 | 2.753624e-48 |
MsG0380015489.01 | MsG0780041299.01 | 0.861382 | 1.067409e-63 | 3.014755e-60 |
MsG0380016129.01 | MsG0780041299.01 | 0.826965 | 2.030877e-54 | 1.933791e-51 |
MsG0380017690.01 | MsG0780041299.01 | 0.807166 | 5.773292e-50 | 3.192920e-47 |
MsG0580026162.01 | MsG0780041299.01 | 0.811015 | 8.648776e-51 | 5.294782e-48 |
MsG0580029412.01 | MsG0780041299.01 | 0.834623 | 2.693522e-56 | 3.214116e-53 |
MsG0680030659.01 | MsG0780041299.01 | 0.801382 | 9.246900e-49 | 4.409700e-46 |
MsG0280007759.01 | MsG0780041299.01 | 0.803134 | 4.028787e-49 | 2.008787e-46 |
MsG0780039334.01 | MsG0780041299.01 | 0.878905 | 1.923887e-69 | 1.022069e-65 |
MsG0780039968.01 | MsG0780041299.01 | 0.803681 | 3.104684e-49 | 1.569890e-46 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0780041299.01 | MsG0680034672.01 | PPI |
MsG0780041299.01 | MsG0380015209.01 | PPI |
MsG0780041299.01 | MsG0680034672.01 | PPI |
MsG0780041299.01 | MsG0680034672.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041299.01.T01 | MTR_7g106340 | 98.812 | 421 | 4 | 1 | 1 | 420 | 1 | 421 | 0.0 | 852 |
MsG0780041299.01.T01 | MTR_1g056880 | 64.302 | 437 | 133 | 5 | 1 | 417 | 1 | 434 | 0.0 | 543 |
MsG0780041299.01.T01 | MTR_1g056870 | 63.616 | 437 | 136 | 5 | 1 | 417 | 1 | 434 | 0.0 | 533 |
MsG0780041299.01.T01 | MTR_1g056840 | 60.641 | 437 | 123 | 7 | 1 | 417 | 1 | 408 | 2.49e-176 | 498 |
MsG0780041299.01.T01 | MTR_2g087350 | 58.173 | 416 | 158 | 5 | 4 | 417 | 2 | 403 | 6.24e-159 | 454 |
MsG0780041299.01.T01 | MTR_1g056910 | 43.269 | 416 | 220 | 6 | 4 | 415 | 2 | 405 | 3.55e-111 | 332 |
MsG0780041299.01.T01 | MTR_4g051515 | 40.000 | 425 | 226 | 10 | 5 | 416 | 3 | 411 | 2.14e-94 | 290 |
MsG0780041299.01.T01 | MTR_3g065080 | 34.123 | 422 | 252 | 11 | 4 | 416 | 32 | 436 | 2.58e-59 | 200 |
MsG0780041299.01.T01 | MTR_5g077510 | 32.706 | 425 | 247 | 13 | 5 | 413 | 32 | 433 | 1.23e-55 | 190 |
MsG0780041299.01.T01 | MTR_4g085720 | 33.333 | 405 | 239 | 14 | 6 | 402 | 12 | 393 | 5.87e-50 | 174 |
MsG0780041299.01.T01 | MTR_6g071340 | 28.916 | 415 | 252 | 12 | 5 | 397 | 2 | 395 | 6.13e-49 | 172 |
MsG0780041299.01.T01 | MTR_5g048050 | 30.858 | 431 | 265 | 14 | 5 | 416 | 22 | 438 | 2.31e-48 | 171 |
MsG0780041299.01.T01 | MTR_8g092870 | 31.343 | 402 | 253 | 11 | 6 | 397 | 8 | 396 | 2.40e-40 | 149 |
MsG0780041299.01.T01 | MTR_3g095730 | 31.738 | 397 | 256 | 11 | 6 | 397 | 11 | 397 | 3.78e-39 | 145 |
MsG0780041299.01.T01 | MTR_3g096370 | 30.392 | 408 | 257 | 13 | 5 | 402 | 7 | 397 | 8.52e-38 | 141 |
MsG0780041299.01.T01 | MTR_4g063800 | 29.440 | 411 | 247 | 12 | 2 | 400 | 249 | 628 | 2.44e-35 | 138 |
MsG0780041299.01.T01 | MTR_5g015210 | 27.318 | 399 | 264 | 8 | 7 | 405 | 66 | 438 | 4.58e-32 | 127 |
MsG0780041299.01.T01 | MTR_7g059405 | 26.385 | 379 | 235 | 10 | 8 | 370 | 264 | 614 | 1.11e-26 | 112 |
MsG0780041299.01.T01 | MTR_4g485520 | 29.642 | 307 | 177 | 11 | 4 | 296 | 101 | 382 | 2.21e-26 | 111 |
MsG0780041299.01.T01 | MTR_4g485520 | 29.642 | 307 | 177 | 11 | 4 | 296 | 269 | 550 | 3.67e-26 | 111 |
MsG0780041299.01.T01 | MTR_1g017770 | 27.725 | 422 | 258 | 12 | 7 | 415 | 44 | 431 | 1.17e-25 | 108 |
MsG0780041299.01.T01 | MTR_7g078330 | 30.952 | 294 | 165 | 10 | 8 | 291 | 274 | 539 | 1.24e-25 | 109 |
MsG0780041299.01.T01 | MTR_2g018010 | 27.036 | 307 | 178 | 9 | 6 | 291 | 290 | 571 | 1.40e-24 | 106 |
MsG0780041299.01.T01 | MTR_3g078160 | 30.726 | 358 | 213 | 16 | 9 | 353 | 276 | 611 | 2.39e-24 | 106 |
MsG0780041299.01.T01 | MTR_3g078160 | 30.726 | 358 | 213 | 16 | 9 | 353 | 276 | 611 | 2.45e-24 | 105 |
MsG0780041299.01.T01 | MTR_1g094215 | 29.795 | 292 | 176 | 8 | 8 | 291 | 64 | 334 | 4.69e-24 | 103 |
MsG0780041299.01.T01 | MTR_4g107010 | 28.750 | 400 | 256 | 15 | 9 | 397 | 281 | 662 | 6.44e-24 | 104 |
MsG0780041299.01.T01 | MTR_1g094215 | 29.795 | 292 | 176 | 8 | 8 | 291 | 247 | 517 | 1.47e-23 | 103 |
MsG0780041299.01.T01 | MTR_5g083030 | 25.134 | 374 | 233 | 12 | 6 | 355 | 291 | 641 | 1.61e-23 | 103 |
MsG0780041299.01.T01 | MTR_5g034440 | 27.957 | 372 | 232 | 15 | 12 | 368 | 284 | 634 | 7.85e-22 | 98.6 |
MsG0780041299.01.T01 | MTR_4g028960 | 28.358 | 268 | 152 | 10 | 5 | 251 | 277 | 525 | 1.59e-20 | 94.4 |
MsG0780041299.01.T01 | MTR_4g091880 | 30.149 | 335 | 197 | 10 | 8 | 337 | 5 | 307 | 2.30e-20 | 92.4 |
MsG0780041299.01.T01 | MTR_4g091880 | 29.091 | 330 | 179 | 9 | 8 | 337 | 5 | 279 | 3.72e-20 | 91.3 |
MsG0780041299.01.T01 | MTR_3g078160 | 33.200 | 250 | 144 | 11 | 9 | 250 | 276 | 510 | 1.47e-19 | 91.3 |
MsG0780041299.01.T01 | MTR_2g011140 | 27.526 | 287 | 181 | 8 | 14 | 295 | 21 | 285 | 2.06e-18 | 86.7 |
MsG0780041299.01.T01 | MTR_7g116600 | 26.821 | 302 | 183 | 12 | 4 | 292 | 74 | 350 | 9.62e-17 | 82.4 |
MsG0780041299.01.T01 | MTR_3g085610 | 44.186 | 86 | 40 | 3 | 9 | 94 | 281 | 358 | 2.02e-16 | 82.0 |
MsG0780041299.01.T01 | MTR_7g053260 | 48.148 | 81 | 37 | 3 | 6 | 86 | 76 | 151 | 2.17e-16 | 81.3 |
MsG0780041299.01.T01 | MTR_1g069845 | 47.945 | 73 | 34 | 3 | 6 | 77 | 122 | 191 | 3.56e-16 | 80.9 |
MsG0780041299.01.T01 | MTR_1g069845 | 47.945 | 73 | 34 | 3 | 6 | 77 | 243 | 312 | 6.27e-16 | 80.5 |
MsG0780041299.01.T01 | MTR_1g069845 | 47.222 | 72 | 36 | 2 | 6 | 77 | 239 | 308 | 6.36e-16 | 80.5 |
MsG0780041299.01.T01 | MTR_8g103227 | 36.441 | 118 | 66 | 2 | 9 | 118 | 396 | 512 | 1.61e-15 | 79.3 |
MsG0780041299.01.T01 | MTR_7g097020 | 45.333 | 75 | 39 | 2 | 6 | 80 | 239 | 311 | 1.65e-14 | 76.3 |
MsG0780041299.01.T01 | MTR_8g080280 | 23.608 | 449 | 273 | 15 | 9 | 404 | 283 | 714 | 3.04e-14 | 75.1 |
MsG0780041299.01.T01 | MTR_3g115670 | 25.503 | 298 | 176 | 9 | 12 | 299 | 34 | 295 | 4.27e-14 | 74.7 |
MsG0780041299.01.T01 | MTR_8g077205 | 26.720 | 378 | 216 | 19 | 9 | 375 | 164 | 491 | 9.65e-14 | 73.6 |
MsG0780041299.01.T01 | MTR_8g077205 | 26.720 | 378 | 216 | 19 | 9 | 375 | 276 | 603 | 1.21e-13 | 73.6 |
MsG0780041299.01.T01 | MTR_1g090320 | 50.000 | 68 | 33 | 1 | 9 | 76 | 514 | 580 | 2.48e-13 | 72.8 |
MsG0780041299.01.T01 | MTR_1g090320 | 50.000 | 68 | 33 | 1 | 9 | 76 | 516 | 582 | 2.53e-13 | 72.8 |
MsG0780041299.01.T01 | MTR_3g466220 | 46.053 | 76 | 37 | 3 | 6 | 80 | 210 | 282 | 3.01e-13 | 72.0 |
MsG0780041299.01.T01 | MTR_3g466220 | 46.053 | 76 | 37 | 3 | 6 | 80 | 231 | 303 | 3.10e-13 | 72.0 |
MsG0780041299.01.T01 | MTR_1g079450 | 38.235 | 102 | 57 | 4 | 1 | 102 | 56 | 151 | 4.24e-13 | 71.2 |
MsG0780041299.01.T01 | MTR_5g032010 | 45.714 | 70 | 36 | 2 | 7 | 76 | 731 | 798 | 6.36e-13 | 71.2 |
MsG0780041299.01.T01 | MTR_2g096850 | 46.575 | 73 | 37 | 2 | 4 | 76 | 736 | 806 | 3.15e-12 | 68.9 |
MsG0780041299.01.T01 | MTR_2g096850 | 46.575 | 73 | 37 | 2 | 4 | 76 | 585 | 655 | 3.19e-12 | 68.9 |
MsG0780041299.01.T01 | MTR_5g020570 | 40.909 | 88 | 46 | 4 | 4 | 91 | 269 | 350 | 4.27e-12 | 68.6 |
MsG0780041299.01.T01 | MTR_5g020570 | 40.909 | 88 | 46 | 4 | 4 | 91 | 284 | 365 | 4.96e-12 | 68.2 |
MsG0780041299.01.T01 | MTR_1g093965 | 52.459 | 61 | 27 | 2 | 21 | 81 | 1 | 59 | 4.98e-12 | 65.1 |
MsG0780041299.01.T01 | MTR_1g100820 | 46.479 | 71 | 36 | 2 | 9 | 79 | 649 | 717 | 8.00e-12 | 67.8 |
MsG0780041299.01.T01 | MTR_1g100820 | 46.479 | 71 | 36 | 2 | 9 | 79 | 647 | 715 | 8.13e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041299.01.T01 | AT3G52450 | 59.361 | 438 | 153 | 7 | 1 | 417 | 1 | 434 | 2.92e-180 | 509 |
MsG0780041299.01.T01 | AT2G35930 | 60.000 | 420 | 150 | 7 | 1 | 417 | 6 | 410 | 1.04e-176 | 499 |
MsG0780041299.01.T01 | AT3G11840 | 37.251 | 451 | 235 | 7 | 2 | 414 | 4 | 444 | 1.77e-88 | 276 |
MsG0780041299.01.T01 | AT3G19380 | 35.641 | 390 | 225 | 8 | 6 | 386 | 12 | 384 | 4.40e-62 | 206 |
MsG0780041299.01.T01 | AT1G49780 | 33.976 | 415 | 250 | 10 | 6 | 411 | 12 | 411 | 6.68e-57 | 193 |
MsG0780041299.01.T01 | AT5G37490 | 30.923 | 401 | 255 | 12 | 3 | 397 | 26 | 410 | 1.54e-46 | 166 |
MsG0780041299.01.T01 | AT1G66160 | 28.537 | 417 | 231 | 10 | 5 | 397 | 30 | 403 | 3.95e-46 | 164 |
MsG0780041299.01.T01 | AT3G18710 | 30.147 | 408 | 260 | 12 | 1 | 397 | 1 | 394 | 8.01e-34 | 131 |
MsG0780041299.01.T01 | AT1G66160 | 25.899 | 417 | 226 | 11 | 5 | 397 | 30 | 387 | 1.82e-33 | 130 |
MsG0780041299.01.T01 | AT5G09800 | 27.848 | 395 | 262 | 9 | 8 | 397 | 11 | 387 | 5.00e-33 | 129 |
MsG0780041299.01.T01 | AT1G23030 | 29.808 | 312 | 184 | 10 | 4 | 307 | 237 | 521 | 1.37e-31 | 127 |
MsG0780041299.01.T01 | AT1G71020 | 28.750 | 320 | 186 | 9 | 4 | 307 | 91 | 384 | 3.35e-30 | 122 |
MsG0780041299.01.T01 | AT1G71020 | 28.750 | 320 | 186 | 9 | 4 | 307 | 239 | 532 | 8.07e-30 | 122 |
MsG0780041299.01.T01 | AT3G46510 | 28.467 | 411 | 239 | 13 | 8 | 400 | 256 | 629 | 2.01e-29 | 121 |
MsG0780041299.01.T01 | AT5G65920 | 27.792 | 403 | 257 | 10 | 7 | 405 | 59 | 431 | 2.48e-29 | 119 |
MsG0780041299.01.T01 | AT5G65920 | 27.792 | 403 | 257 | 10 | 7 | 405 | 59 | 431 | 2.48e-29 | 119 |
MsG0780041299.01.T01 | AT5G64660 | 27.494 | 411 | 261 | 13 | 6 | 398 | 8 | 399 | 8.98e-29 | 117 |
MsG0780041299.01.T01 | AT3G49810 | 26.904 | 394 | 256 | 9 | 7 | 397 | 63 | 427 | 1.25e-28 | 117 |
MsG0780041299.01.T01 | AT5G42340 | 30.605 | 281 | 167 | 9 | 8 | 284 | 290 | 546 | 1.46e-26 | 112 |
MsG0780041299.01.T01 | AT2G28830 | 30.744 | 309 | 172 | 11 | 2 | 293 | 178 | 461 | 3.60e-26 | 111 |
MsG0780041299.01.T01 | AT3G54850 | 28.328 | 293 | 180 | 8 | 8 | 291 | 248 | 519 | 4.11e-26 | 111 |
MsG0780041299.01.T01 | AT1G29340 | 26.570 | 414 | 256 | 14 | 6 | 400 | 303 | 687 | 7.32e-25 | 107 |
MsG0780041299.01.T01 | AT4G21350 | 29.032 | 341 | 206 | 10 | 6 | 341 | 3 | 312 | 7.32e-23 | 99.8 |
MsG0780041299.01.T01 | AT1G10560 | 28.105 | 306 | 184 | 11 | 2 | 291 | 280 | 565 | 1.09e-21 | 98.2 |
MsG0780041299.01.T01 | AT5G01830 | 27.931 | 290 | 176 | 9 | 5 | 284 | 271 | 537 | 2.03e-19 | 91.3 |
MsG0780041299.01.T01 | AT1G60190 | 26.829 | 328 | 204 | 12 | 14 | 326 | 284 | 590 | 6.03e-19 | 89.7 |
MsG0780041299.01.T01 | AT3G07360 | 27.027 | 296 | 180 | 10 | 6 | 287 | 72 | 345 | 6.28e-17 | 82.8 |
MsG0780041299.01.T01 | AT3G02840 | 26.087 | 345 | 224 | 13 | 85 | 412 | 40 | 370 | 7.34e-17 | 82.0 |
MsG0780041299.01.T01 | AT1G67530 | 47.059 | 85 | 39 | 3 | 9 | 93 | 273 | 351 | 5.30e-16 | 80.5 |
MsG0780041299.01.T01 | AT5G18320 | 29.617 | 287 | 182 | 8 | 2 | 284 | 66 | 336 | 6.31e-16 | 79.7 |
MsG0780041299.01.T01 | AT1G67530 | 47.059 | 85 | 39 | 3 | 9 | 93 | 273 | 351 | 7.08e-16 | 80.5 |
MsG0780041299.01.T01 | AT1G67530 | 47.059 | 85 | 39 | 3 | 9 | 93 | 273 | 351 | 7.08e-16 | 80.5 |
MsG0780041299.01.T01 | AT1G67530 | 47.059 | 85 | 39 | 3 | 9 | 93 | 273 | 351 | 7.08e-16 | 80.5 |
MsG0780041299.01.T01 | AT1G27910 | 47.059 | 85 | 39 | 3 | 9 | 93 | 280 | 358 | 3.23e-15 | 78.2 |
MsG0780041299.01.T01 | AT5G65500 | 46.914 | 81 | 41 | 2 | 4 | 84 | 719 | 797 | 3.80e-15 | 78.2 |
MsG0780041299.01.T01 | AT5G65500 | 46.914 | 81 | 41 | 2 | 4 | 84 | 711 | 789 | 3.89e-15 | 78.2 |
MsG0780041299.01.T01 | AT1G24330 | 47.059 | 85 | 39 | 4 | 9 | 93 | 276 | 354 | 8.71e-15 | 77.0 |
MsG0780041299.01.T01 | AT1G24330 | 47.059 | 85 | 39 | 4 | 9 | 93 | 276 | 354 | 8.71e-15 | 77.0 |
MsG0780041299.01.T01 | AT5G18340 | 27.974 | 311 | 188 | 13 | 2 | 299 | 68 | 355 | 2.16e-14 | 75.1 |
MsG0780041299.01.T01 | AT3G54790 | 44.000 | 75 | 40 | 2 | 6 | 80 | 200 | 272 | 9.80e-14 | 73.6 |
MsG0780041299.01.T01 | AT5G67340 | 46.667 | 75 | 38 | 2 | 6 | 80 | 238 | 310 | 1.04e-13 | 73.6 |
MsG0780041299.01.T01 | AT5G67340 | 46.667 | 75 | 38 | 2 | 6 | 80 | 238 | 310 | 1.04e-13 | 73.6 |
MsG0780041299.01.T01 | AT1G01660 | 42.466 | 73 | 40 | 2 | 9 | 81 | 499 | 569 | 1.06e-13 | 73.2 |
MsG0780041299.01.T01 | AT1G01660 | 42.466 | 73 | 40 | 2 | 9 | 81 | 498 | 568 | 1.08e-13 | 73.2 |
MsG0780041299.01.T01 | AT3G54790 | 44.000 | 75 | 40 | 2 | 6 | 80 | 236 | 308 | 1.22e-13 | 73.6 |
MsG0780041299.01.T01 | AT3G54790 | 44.000 | 75 | 40 | 2 | 6 | 80 | 236 | 308 | 1.22e-13 | 73.6 |
MsG0780041299.01.T01 | AT2G45920 | 44.737 | 76 | 40 | 2 | 7 | 82 | 324 | 397 | 2.13e-13 | 72.0 |
MsG0780041299.01.T01 | AT5G57035 | 43.478 | 69 | 37 | 2 | 8 | 76 | 708 | 774 | 4.20e-13 | 71.6 |
MsG0780041299.01.T01 | AT2G23140 | 37.634 | 93 | 52 | 3 | 12 | 104 | 237 | 323 | 8.19e-13 | 70.9 |
MsG0780041299.01.T01 | AT2G23140 | 37.634 | 93 | 52 | 3 | 12 | 104 | 234 | 320 | 8.25e-13 | 70.9 |
MsG0780041299.01.T01 | AT2G23140 | 37.634 | 93 | 52 | 3 | 12 | 104 | 234 | 320 | 8.25e-13 | 70.9 |
MsG0780041299.01.T01 | AT2G23140 | 37.634 | 93 | 52 | 3 | 12 | 104 | 45 | 131 | 9.29e-13 | 70.5 |
MsG0780041299.01.T01 | AT2G23140 | 37.634 | 93 | 52 | 3 | 12 | 104 | 45 | 131 | 9.29e-13 | 70.5 |
MsG0780041299.01.T01 | AT1G68940 | 27.564 | 156 | 82 | 4 | 12 | 158 | 303 | 436 | 1.01e-12 | 70.9 |
MsG0780041299.01.T01 | AT1G68940 | 27.564 | 156 | 82 | 4 | 12 | 158 | 250 | 383 | 1.02e-12 | 70.9 |
MsG0780041299.01.T01 | AT1G68940 | 27.564 | 156 | 82 | 4 | 12 | 158 | 303 | 436 | 1.10e-12 | 70.5 |
MsG0780041299.01.T01 | AT4G36550 | 43.243 | 74 | 40 | 2 | 8 | 81 | 219 | 290 | 1.36e-12 | 70.1 |
MsG0780041299.01.T01 | AT2G19410 | 45.070 | 71 | 36 | 2 | 6 | 76 | 709 | 776 | 3.18e-12 | 68.9 |
MsG0780041299.01.T01 | AT2G19410 | 45.070 | 71 | 36 | 2 | 6 | 76 | 723 | 790 | 3.44e-12 | 68.9 |
MsG0780041299.01.T01 | AT2G19410 | 45.070 | 71 | 36 | 2 | 6 | 76 | 744 | 811 | 3.54e-12 | 68.9 |
MsG0780041299.01.T01 | AT3G61390 | 41.096 | 73 | 41 | 2 | 7 | 79 | 277 | 347 | 6.73e-12 | 67.0 |
MsG0780041299.01.T01 | AT2G45910 | 44.928 | 69 | 36 | 2 | 8 | 76 | 763 | 829 | 7.08e-12 | 67.8 |
MsG0780041299.01.T01 | AT2G45910 | 44.928 | 69 | 36 | 2 | 8 | 76 | 763 | 829 | 7.08e-12 | 67.8 |
MsG0780041299.01.T01 | AT5G18330 | 27.513 | 378 | 242 | 16 | 2 | 372 | 59 | 411 | 7.83e-12 | 67.4 |
MsG0780041299.01.T01 | AT3G61390 | 41.096 | 73 | 41 | 2 | 7 | 79 | 352 | 422 | 7.90e-12 | 67.0 |
MsG0780041299.01.T01 | AT1G76390 | 42.029 | 69 | 35 | 2 | 12 | 76 | 29 | 96 | 1.16e-11 | 67.4 |
MsG0780041299.01.T01 | AT1G76390 | 42.029 | 69 | 35 | 2 | 12 | 76 | 29 | 96 | 1.16e-11 | 67.4 |
MsG0780041299.01.T01 | AT1G01680 | 46.377 | 69 | 35 | 2 | 12 | 80 | 237 | 303 | 1.37e-11 | 65.5 |
MsG0780041299.01.T01 | AT1G20780 | 41.096 | 73 | 38 | 2 | 12 | 80 | 27 | 98 | 2.41e-11 | 66.2 |
MsG0780041299.01.T01 | AT1G20780 | 41.096 | 73 | 38 | 2 | 12 | 80 | 27 | 98 | 2.41e-11 | 66.2 |
MsG0780041299.01.T01 | AT1G20780 | 41.096 | 73 | 38 | 2 | 12 | 80 | 27 | 98 | 2.41e-11 | 66.2 |
Find 53 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAATTAATTTCACTCATAAT+TGG | 0.132240 | 7:+89342882 | None:intergenic |
CTTCATGATTTCTAATGATA+TGG | 0.167930 | 7:+89344088 | None:intergenic |
CCCATGGACAAAGTGCAATT+AGG | 0.274546 | 7:+89343340 | None:intergenic |
AATTGAGTTGTTCGTTGAAT+TGG | 0.278950 | 7:-89343418 | MsG0780041299.01.T01:CDS |
TTGTTTCTAAGAAGATTCTA+AGG | 0.280230 | 7:-89343143 | MsG0780041299.01.T01:CDS |
AATTAATTTCACTCATAATT+GGG | 0.308217 | 7:+89342883 | None:intergenic |
AGACTTAGATCTATGGCTTC+TGG | 0.311800 | 7:-89343771 | MsG0780041299.01.T01:CDS |
ATACCTGTTGAGACTGTTAC+TGG | 0.321164 | 7:+89344062 | None:intergenic |
AGCATTTCTTGAACAACATT+AGG | 0.349387 | 7:+89343054 | None:intergenic |
AAAACCAACATCATTTCATT+TGG | 0.354293 | 7:+89343234 | None:intergenic |
CCATGGACAAAGTGCAATTA+GGG | 0.368711 | 7:+89343341 | None:intergenic |
CCTGAAAAGACTTAGATCTA+TGG | 0.371986 | 7:-89343778 | MsG0780041299.01.T01:CDS |
TTCATGATTTCTAATGATAT+GGG | 0.374449 | 7:+89344089 | None:intergenic |
AACAAAAGTTCTATTAAAAC+AGG | 0.395977 | 7:+89343279 | None:intergenic |
CCCTAATTGCACTTTGTCCA+TGG | 0.421105 | 7:-89343341 | MsG0780041299.01.T01:CDS |
ATTGACTTTGTTAACAACTC+TGG | 0.442706 | 7:-89343666 | MsG0780041299.01.T01:CDS |
TTGATTCTGTTTCTTCCCCA+TGG | 0.450469 | 7:+89343324 | None:intergenic |
TAACAAAAGTTATGCAGAAA+GGG | 0.457802 | 7:-89343524 | MsG0780041299.01.T01:CDS |
AATCTTCATGTGTCTGAAGC+TGG | 0.462024 | 7:-89343594 | MsG0780041299.01.T01:CDS |
TGTTGTGGCTAAGCTTTGCT+TGG | 0.464959 | 7:-89343022 | MsG0780041299.01.T01:CDS |
TTAACAAAAGTTATGCAGAA+AGG | 0.481783 | 7:-89343525 | MsG0780041299.01.T01:CDS |
GATCCAGTAACAGTCTCAAC+AGG | 0.492806 | 7:-89344065 | MsG0780041299.01.T01:CDS |
AGATACTTAAGATGCATGCT+AGG | 0.498217 | 7:-89342954 | MsG0780041299.01.T01:CDS |
AGAATCAAAGGTGTTGAAGC+AGG | 0.520466 | 7:-89343309 | MsG0780041299.01.T01:CDS |
AAACTACTAGCTTTCAGAAA+CGG | 0.522337 | 7:-89343564 | MsG0780041299.01.T01:CDS |
AATCTTTGTCAGTGTGCTGA+AGG | 0.523947 | 7:-89343204 | MsG0780041299.01.T01:CDS |
CCTAATTGCACTTTGTCCAT+GGG | 0.524037 | 7:-89343340 | MsG0780041299.01.T01:CDS |
ACGCTTCACAAGGCATTGAA+AGG | 0.524077 | 7:-89343893 | MsG0780041299.01.T01:CDS |
TTAGAAGACTCATTCAAGCT+TGG | 0.528792 | 7:-89343926 | MsG0780041299.01.T01:CDS |
AAAACCAAATGAAATGATGT+TGG | 0.529378 | 7:-89343238 | MsG0780041299.01.T01:CDS |
TATGAAGAAAGCAAATTACT+AGG | 0.534963 | 7:+89342907 | None:intergenic |
AGCAAATTACTAGGTATGCA+TGG | 0.539218 | 7:+89342916 | None:intergenic |
ATTAATTTCACTCATAATTG+GGG | 0.541983 | 7:+89342884 | None:intergenic |
GTTCAAGAAATGCTTAAACT+TGG | 0.545979 | 7:-89343045 | MsG0780041299.01.T01:CDS |
GAATGAGTCTTCTAAGAGTG+TGG | 0.559382 | 7:+89343934 | None:intergenic |
TGGGGAAGAAACAGAATCAA+AGG | 0.566142 | 7:-89343321 | MsG0780041299.01.T01:CDS |
AGTCTTCTAAGAGTGTGGTT+TGG | 0.569998 | 7:+89343939 | None:intergenic |
TGATTGTGGAAGTAAGACTA+AGG | 0.572296 | 7:-89342989 | MsG0780041299.01.T01:CDS |
TTAAGATGCATGCTAGGGCA+TGG | 0.573333 | 7:-89342948 | MsG0780041299.01.T01:CDS |
TGTTTCTAAGAAGATTCTAA+GGG | 0.577022 | 7:-89343142 | MsG0780041299.01.T01:CDS |
TTCAATACTTTCTCTGTCGT+AGG | 0.588046 | 7:+89344037 | None:intergenic |
AAACGTTGCATAGAAGATGC+AGG | 0.588793 | 7:-89343735 | MsG0780041299.01.T01:CDS |
ATGGGGCAGACAAAGAATGA+AGG | 0.611200 | 7:+89344107 | None:intergenic |
CATATCATTAGAAATCATGA+AGG | 0.612177 | 7:-89344087 | MsG0780041299.01.T01:CDS |
TCATGATTTCTAATGATATG+GGG | 0.613195 | 7:+89344090 | None:intergenic |
AATGCTTAAACTTGGTGTTG+TGG | 0.614712 | 7:-89343037 | MsG0780041299.01.T01:CDS |
GATACTTAAGATGCATGCTA+GGG | 0.623745 | 7:-89342953 | MsG0780041299.01.T01:CDS |
TGTACATTAAACGCTTCACA+AGG | 0.640683 | 7:-89343903 | MsG0780041299.01.T01:CDS |
TTGGTTCTTCAAGTTGATTG+TGG | 0.650079 | 7:-89343003 | MsG0780041299.01.T01:CDS |
TATGGATCATGATGAGATCG+AGG | 0.658015 | 7:-89344132 | MsG0780041299.01.T01:CDS |
CTAATTGCACTTTGTCCATG+GGG | 0.658320 | 7:-89343339 | MsG0780041299.01.T01:CDS |
AGATGCATGCTAGGGCATGG+AGG | 0.701659 | 7:-89342945 | MsG0780041299.01.T01:CDS |
TTGCGAATGATAGAGCTGTG+AGG | 0.775637 | 7:-89343110 | MsG0780041299.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAAAAGTTCTATTAAAAC+AGG | + | Chr7:89343746-89343765 | None:intergenic | 20.0% |
!! | TTCATGATTTCTAATGATAT+GGG | + | Chr7:89342936-89342955 | None:intergenic | 20.0% |
! | AAAACCAAATGAAATGATGT+TGG | - | Chr7:89343784-89343803 | MsG0780041299.01.T01:CDS | 25.0% |
! | AAAACCAACATCATTTCATT+TGG | + | Chr7:89343791-89343810 | None:intergenic | 25.0% |
! | CATATCATTAGAAATCATGA+AGG | - | Chr7:89342935-89342954 | MsG0780041299.01.T01:CDS | 25.0% |
! | CTTCATGATTTCTAATGATA+TGG | + | Chr7:89342937-89342956 | None:intergenic | 25.0% |
! | TAACAAAAGTTATGCAGAAA+GGG | - | Chr7:89343498-89343517 | MsG0780041299.01.T01:CDS | 25.0% |
! | TATGAAGAAAGCAAATTACT+AGG | + | Chr7:89344118-89344137 | None:intergenic | 25.0% |
! | TCATGATTTCTAATGATATG+GGG | + | Chr7:89342935-89342954 | None:intergenic | 25.0% |
! | TTAACAAAAGTTATGCAGAA+AGG | - | Chr7:89343497-89343516 | MsG0780041299.01.T01:CDS | 25.0% |
!! | TGTTTCTAAGAAGATTCTAA+GGG | - | Chr7:89343880-89343899 | MsG0780041299.01.T01:CDS | 25.0% |
!!! | ACAGAGAAAGTATTGAAAAA+TGG | - | Chr7:89342991-89343010 | MsG0780041299.01.T01:CDS | 25.0% |
!!! | TTGTTTCTAAGAAGATTCTA+AGG | - | Chr7:89343879-89343898 | MsG0780041299.01.T01:CDS | 25.0% |
!!! | TTTGATGAGTTTTGTGATTT+GGG | + | Chr7:89343186-89343205 | None:intergenic | 25.0% |
AGCATTTCTTGAACAACATT+AGG | + | Chr7:89343971-89343990 | None:intergenic | 30.0% | |
GTTCAAGAAATGCTTAAACT+TGG | - | Chr7:89343977-89343996 | MsG0780041299.01.T01:CDS | 30.0% | |
TAAGACTAAGGAAAAAGCAA+GGG | - | Chr7:89344045-89344064 | MsG0780041299.01.T01:CDS | 30.0% | |
! | AATTGAGTTGTTCGTTGAAT+TGG | - | Chr7:89343604-89343623 | MsG0780041299.01.T01:CDS | 30.0% |
! | ATTGACTTTGTTAACAACTC+TGG | - | Chr7:89343356-89343375 | MsG0780041299.01.T01:CDS | 30.0% |
!! | AAACTACTAGCTTTCAGAAA+CGG | - | Chr7:89343458-89343477 | MsG0780041299.01.T01:CDS | 30.0% |
!! | CTTTGATGAGTTTTGTGATT+TGG | + | Chr7:89343187-89343206 | None:intergenic | 30.0% |
!! | TGAATTGGTACAAGTTTTGA+AGG | - | Chr7:89343619-89343638 | MsG0780041299.01.T01:CDS | 30.0% |
!!! | GATAGCTGTTGTTTTGTAAT+AGG | + | Chr7:89343044-89343063 | None:intergenic | 30.0% |
!!! | TGAAATGATGTTGGTTTTGT+TGG | - | Chr7:89343793-89343812 | MsG0780041299.01.T01:CDS | 30.0% |
AGATACTTAAGATGCATGCT+AGG | - | Chr7:89344068-89344087 | MsG0780041299.01.T01:CDS | 35.0% | |
AGCAAATTACTAGGTATGCA+TGG | + | Chr7:89344109-89344128 | None:intergenic | 35.0% | |
CCTGAAAAGACTTAGATCTA+TGG | - | Chr7:89343244-89343263 | MsG0780041299.01.T01:CDS | 35.0% | |
GATACTTAAGATGCATGCTA+GGG | - | Chr7:89344069-89344088 | MsG0780041299.01.T01:CDS | 35.0% | |
GTAAGACTAAGGAAAAAGCA+AGG | - | Chr7:89344044-89344063 | MsG0780041299.01.T01:CDS | 35.0% | |
TGATTGTGGAAGTAAGACTA+AGG | - | Chr7:89344033-89344052 | MsG0780041299.01.T01:CDS | 35.0% | |
TGTACATTAAACGCTTCACA+AGG | - | Chr7:89343119-89343138 | MsG0780041299.01.T01:CDS | 35.0% | |
TTAGAAGACTCATTCAAGCT+TGG | - | Chr7:89343096-89343115 | MsG0780041299.01.T01:CDS | 35.0% | |
TTCAATACTTTCTCTGTCGT+AGG | + | Chr7:89342988-89343007 | None:intergenic | 35.0% | |
! | CCATAGATCTAAGTCTTTTC+AGG | + | Chr7:89343247-89343266 | None:intergenic | 35.0% |
! | TTTTGATGTAGTAACTGCAC+TGG | + | Chr7:89343584-89343603 | None:intergenic | 35.0% |
!! | AATGCTTAAACTTGGTGTTG+TGG | - | Chr7:89343985-89344004 | MsG0780041299.01.T01:CDS | 35.0% |
!! | GTTTTGTTGATTGGTGGTTT+TGG | + | Chr7:89343164-89343183 | None:intergenic | 35.0% |
!! | TTGGTTCTTCAAGTTGATTG+TGG | - | Chr7:89344019-89344038 | MsG0780041299.01.T01:CDS | 35.0% |
!!! | ATTTGGGTTTTGTTGATTGG+TGG | + | Chr7:89343170-89343189 | None:intergenic | 35.0% |
!!! | GTGATTTGGGTTTTGTTGAT+TGG | + | Chr7:89343173-89343192 | None:intergenic | 35.0% |
AAACGTTGCATAGAAGATGC+AGG | - | Chr7:89343287-89343306 | MsG0780041299.01.T01:CDS | 40.0% | |
AATCTTTGTCAGTGTGCTGA+AGG | - | Chr7:89343818-89343837 | MsG0780041299.01.T01:CDS | 40.0% | |
AGACTTAGATCTATGGCTTC+TGG | - | Chr7:89343251-89343270 | MsG0780041299.01.T01:CDS | 40.0% | |
ATACCTGTTGAGACTGTTAC+TGG | + | Chr7:89342963-89342982 | None:intergenic | 40.0% | |
CCATGGACAAAGTGCAATTA+GGG | + | Chr7:89343684-89343703 | None:intergenic | 40.0% | |
CCTAATTGCACTTTGTCCAT+GGG | - | Chr7:89343682-89343701 | MsG0780041299.01.T01:CDS | 40.0% | |
CTAATTGCACTTTGTCCATG+GGG | - | Chr7:89343683-89343702 | MsG0780041299.01.T01:CDS | 40.0% | |
TGGGGAAGAAACAGAATCAA+AGG | - | Chr7:89343701-89343720 | MsG0780041299.01.T01:CDS | 40.0% | |
! | AATCTTCATGTGTCTGAAGC+TGG | - | Chr7:89343428-89343447 | MsG0780041299.01.T01:CDS | 40.0% |
! | AGTCTTCTAAGAGTGTGGTT+TGG | + | Chr7:89343086-89343105 | None:intergenic | 40.0% |
! | GAATGAGTCTTCTAAGAGTG+TGG | + | Chr7:89343091-89343110 | None:intergenic | 40.0% |
! | TTGATTCTGTTTCTTCCCCA+TGG | + | Chr7:89343701-89343720 | None:intergenic | 40.0% |
!! | AGAATCAAAGGTGTTGAAGC+AGG | - | Chr7:89343713-89343732 | MsG0780041299.01.T01:CDS | 40.0% |
!!! | TTGATTGGTGGTTTTGGAGT+TGG | + | Chr7:89343158-89343177 | None:intergenic | 40.0% |
ATGGGGCAGACAAAGAATGA+AGG | + | Chr7:89342918-89342937 | None:intergenic | 45.0% | |
CCCATGGACAAAGTGCAATT+AGG | + | Chr7:89343685-89343704 | None:intergenic | 45.0% | |
CCCTAATTGCACTTTGTCCA+TGG | - | Chr7:89343681-89343700 | MsG0780041299.01.T01:CDS | 45.0% | |
GATCCAGTAACAGTCTCAAC+AGG | - | Chr7:89342957-89342976 | MsG0780041299.01.T01:CDS | 45.0% | |
TGTTGTGGCTAAGCTTTGCT+TGG | - | Chr7:89344000-89344019 | MsG0780041299.01.T01:CDS | 45.0% | |
TTAAGATGCATGCTAGGGCA+TGG | - | Chr7:89344074-89344093 | MsG0780041299.01.T01:CDS | 45.0% | |
TTGCGAATGATAGAGCTGTG+AGG | - | Chr7:89343912-89343931 | MsG0780041299.01.T01:CDS | 45.0% | |
!! | ACGCTTCACAAGGCATTGAA+AGG | - | Chr7:89343129-89343148 | MsG0780041299.01.T01:CDS | 45.0% |
!!! | GAACTTTTGAGACATGCAGC+AGG | - | Chr7:89343848-89343867 | MsG0780041299.01.T01:CDS | 45.0% |
AGATGCATGCTAGGGCATGG+AGG | - | Chr7:89344077-89344096 | MsG0780041299.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 89342891 | 89344153 | 89342891 | ID=MsG0780041299.01;Name=MsG0780041299.01 |
Chr7 | mRNA | 89342891 | 89344153 | 89342891 | ID=MsG0780041299.01.T01;Parent=MsG0780041299.01;Name=MsG0780041299.01.T01;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|420 |
Chr7 | exon | 89342891 | 89344153 | 89342891 | ID=MsG0780041299.01.T01:exon:41594;Parent=MsG0780041299.01.T01 |
Chr7 | CDS | 89342891 | 89344153 | 89342891 | ID=MsG0780041299.01.T01:cds;Parent=MsG0780041299.01.T01 |
Gene Sequence |
Protein sequence |