Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015408.01.T01 | XP_013461369.1 | 84.007 | 569 | 35 | 3 | 30 | 542 | 2 | 570 | 0 | 936 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015408.01.T01 | Q9SDQ3 | 52.333 | 600 | 175 | 17 | 33 | 542 | 15 | 593 | 5.43E-180 | 522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015408.01.T01 | A0A072V083 | 84.007 | 569 | 35 | 3 | 30 | 542 | 2 | 570 | 0.0 | 936 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380015408.01.T01 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000399.01 | MsG0380015408.01 | 0.809833 | 1.556213e-50 | 9.233259e-48 |
| MsG0180002006.01 | MsG0380015408.01 | 0.811520 | 6.721206e-51 | 4.169532e-48 |
| MsG0180002935.01 | MsG0380015408.01 | 0.818429 | 1.968860e-52 | 1.473510e-49 |
| MsG0180003375.01 | MsG0380015408.01 | 0.800938 | 1.139646e-48 | 5.374380e-46 |
| MsG0280006442.01 | MsG0380015408.01 | 0.806832 | 6.793432e-50 | 3.724714e-47 |
| MsG0380012913.01 | MsG0380015408.01 | 0.803593 | 3.237729e-49 | 1.633587e-46 |
| MsG0380014410.01 | MsG0380015408.01 | 0.821999 | 2.994421e-53 | 2.475111e-50 |
| MsG0380015408.01 | MsG0380016451.01 | 0.817920 | 2.566876e-52 | 1.894277e-49 |
| MsG0380015408.01 | MsG0480018409.01 | 0.811833 | 5.743224e-51 | 3.592421e-48 |
| MsG0380015408.01 | MsG0480019923.01 | 0.801877 | 7.317578e-49 | 3.533844e-46 |
| MsG0380015408.01 | MsG0480020539.01 | 0.804866 | 1.758361e-49 | 9.167765e-47 |
| MsG0380015408.01 | MsG0480020814.01 | 0.803266 | 3.783687e-49 | 1.892986e-46 |
| MsG0380015408.01 | MsG0480021551.01 | 0.812340 | 4.453988e-51 | 2.824572e-48 |
| MsG0380015408.01 | MsG0480021600.01 | 0.827585 | 1.442145e-54 | 1.398073e-51 |
| MsG0380015408.01 | MsG0580025117.01 | 0.815635 | 8.358053e-52 | 5.794015e-49 |
| MsG0380015408.01 | MsG0680032343.01 | 0.800079 | 1.705487e-48 | 7.869125e-46 |
| MsG0380015408.01 | MsG0680035841.01 | 0.802288 | 6.024632e-49 | 2.939993e-46 |
| MsG0380015408.01 | MsG0780038519.01 | 0.813451 | 2.543154e-51 | 1.661467e-48 |
| MsG0380015408.01 | MsG0780039237.01 | 0.809932 | 1.481614e-50 | 8.813571e-48 |
| MsG0380015408.01 | MsG0880046038.01 | 0.811773 | 5.919251e-51 | 3.696626e-48 |
| MsG0380015408.01 | MsG0880046838.01 | -0.801075 | 1.068471e-48 | 5.056316e-46 |
| MsG0380015408.01 | MsG0880047714.01 | 0.819404 | 1.182446e-52 | 9.090391e-50 |
| MsG0280007786.01 | MsG0380015408.01 | 0.812160 | 4.876239e-51 | 3.077299e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015408.01.T01 | MTR_3g089055 | 84.007 | 569 | 35 | 3 | 30 | 542 | 2 | 570 | 0.0 | 936 |
| MsG0380015408.01.T01 | MTR_3g089055 | 84.071 | 565 | 34 | 3 | 34 | 542 | 1 | 565 | 0.0 | 928 |
| MsG0380015408.01.T01 | MTR_1g029420 | 60.935 | 599 | 137 | 10 | 34 | 542 | 1 | 592 | 0.0 | 654 |
| MsG0380015408.01.T01 | MTR_5g097480 | 43.750 | 416 | 172 | 4 | 189 | 542 | 129 | 544 | 7.44e-117 | 356 |
| MsG0380015408.01.T01 | MTR_2g082090 | 45.799 | 369 | 144 | 3 | 229 | 541 | 210 | 578 | 1.10e-107 | 334 |
| MsG0380015408.01.T01 | MTR_3g056110 | 42.520 | 381 | 162 | 4 | 219 | 542 | 162 | 542 | 4.23e-105 | 326 |
| MsG0380015408.01.T01 | MTR_5g094450 | 43.636 | 385 | 156 | 6 | 219 | 542 | 148 | 532 | 1.81e-102 | 319 |
| MsG0380015408.01.T01 | MTR_4g133660 | 41.081 | 370 | 161 | 4 | 229 | 541 | 173 | 542 | 1.06e-93 | 296 |
| MsG0380015408.01.T01 | MTR_2g026250 | 41.509 | 371 | 160 | 4 | 229 | 542 | 226 | 596 | 2.56e-92 | 294 |
| MsG0380015408.01.T01 | MTR_6g047750 | 35.433 | 381 | 168 | 9 | 229 | 542 | 293 | 662 | 5.97e-60 | 210 |
| MsG0380015408.01.T01 | MTR_7g057230 | 33.626 | 455 | 221 | 12 | 152 | 541 | 218 | 656 | 6.61e-60 | 210 |
| MsG0380015408.01.T01 | MTR_7g027190 | 33.333 | 381 | 180 | 7 | 230 | 542 | 299 | 673 | 6.64e-53 | 191 |
| MsG0380015408.01.T01 | MTR_3g065980 | 29.067 | 375 | 195 | 8 | 232 | 542 | 173 | 540 | 7.79e-44 | 164 |
| MsG0380015408.01.T01 | MTR_4g104020 | 28.906 | 384 | 191 | 7 | 230 | 542 | 148 | 520 | 8.48e-42 | 157 |
| MsG0380015408.01.T01 | MTR_4g064200 | 28.800 | 375 | 194 | 7 | 231 | 541 | 284 | 649 | 2.14e-40 | 155 |
| MsG0380015408.01.T01 | MTR_8g442410 | 28.989 | 376 | 196 | 9 | 232 | 542 | 156 | 525 | 2.72e-39 | 150 |
| MsG0380015408.01.T01 | MTR_4g064160 | 27.394 | 376 | 204 | 4 | 229 | 541 | 314 | 683 | 3.79e-39 | 152 |
| MsG0380015408.01.T01 | MTR_7g074650 | 30.748 | 361 | 189 | 8 | 234 | 542 | 441 | 792 | 5.07e-39 | 152 |
| MsG0380015408.01.T01 | MTR_7g062120 | 27.960 | 397 | 223 | 6 | 209 | 542 | 344 | 740 | 5.22e-38 | 149 |
| MsG0380015408.01.T01 | MTR_4g102790 | 32.723 | 382 | 174 | 17 | 231 | 541 | 292 | 661 | 2.72e-36 | 144 |
| MsG0380015408.01.T01 | MTR_4g064150 | 24.866 | 374 | 220 | 6 | 229 | 541 | 359 | 732 | 1.32e-35 | 142 |
| MsG0380015408.01.T01 | MTR_4g064180 | 25.734 | 443 | 258 | 9 | 163 | 540 | 188 | 624 | 1.49e-35 | 141 |
| MsG0380015408.01.T01 | MTR_4g064120 | 25.508 | 443 | 259 | 9 | 163 | 540 | 188 | 624 | 1.56e-35 | 141 |
| MsG0380015408.01.T01 | MTR_2g097390 | 27.926 | 376 | 200 | 10 | 229 | 541 | 273 | 640 | 5.39e-35 | 139 |
| MsG0380015408.01.T01 | MTR_2g097467 | 26.247 | 381 | 225 | 6 | 215 | 541 | 275 | 653 | 8.56e-35 | 139 |
| MsG0380015408.01.T01 | MTR_2g097310 | 26.455 | 378 | 203 | 6 | 229 | 541 | 270 | 637 | 2.19e-34 | 137 |
| MsG0380015408.01.T01 | MTR_2g097350 | 27.838 | 370 | 208 | 11 | 229 | 541 | 272 | 639 | 4.35e-34 | 137 |
| MsG0380015408.01.T01 | MTR_2g097410 | 25.936 | 374 | 214 | 9 | 229 | 541 | 369 | 740 | 1.48e-33 | 135 |
| MsG0380015408.01.T01 | MTR_2g097463 | 25.479 | 365 | 218 | 4 | 231 | 541 | 290 | 654 | 1.36e-32 | 132 |
| MsG0380015408.01.T01 | MTR_4g097080 | 24.603 | 378 | 216 | 9 | 229 | 542 | 131 | 503 | 1.54e-32 | 131 |
| MsG0380015408.01.T01 | MTR_2g097473 | 23.930 | 514 | 308 | 12 | 100 | 541 | 151 | 653 | 2.30e-32 | 132 |
| MsG0380015408.01.T01 | MTR_4g077760 | 27.807 | 374 | 195 | 10 | 232 | 542 | 194 | 555 | 2.86e-31 | 128 |
| MsG0380015408.01.T01 | MTR_5g015490 | 27.456 | 397 | 207 | 15 | 218 | 542 | 103 | 490 | 1.12e-30 | 125 |
| MsG0380015408.01.T01 | MTR_4g076140 | 39.333 | 150 | 90 | 1 | 394 | 542 | 320 | 469 | 2.68e-30 | 124 |
| MsG0380015408.01.T01 | MTR_1g096030 | 25.515 | 388 | 207 | 12 | 230 | 542 | 79 | 459 | 2.96e-28 | 118 |
| MsG0380015408.01.T01 | MTR_4g076020 | 26.216 | 370 | 185 | 9 | 234 | 542 | 87 | 429 | 2.23e-27 | 115 |
| MsG0380015408.01.T01 | MTR_5g009080 | 36.000 | 150 | 95 | 1 | 394 | 542 | 329 | 478 | 3.10e-27 | 115 |
| MsG0380015408.01.T01 | MTR_2g097380 | 25.360 | 347 | 199 | 6 | 238 | 541 | 231 | 560 | 4.90e-27 | 115 |
| MsG0380015408.01.T01 | MTR_1g069725 | 27.095 | 358 | 210 | 12 | 231 | 541 | 109 | 462 | 1.11e-26 | 113 |
| MsG0380015408.01.T01 | MTR_3g022830 | 34.555 | 191 | 115 | 4 | 357 | 542 | 251 | 436 | 9.86e-26 | 110 |
| MsG0380015408.01.T01 | MTR_3g072710 | 28.625 | 269 | 146 | 7 | 308 | 541 | 242 | 499 | 8.48e-25 | 108 |
| MsG0380015408.01.T01 | MTR_5g015950 | 31.915 | 188 | 112 | 2 | 369 | 541 | 259 | 445 | 3.74e-24 | 105 |
| MsG0380015408.01.T01 | MTR_3g053270 | 31.915 | 188 | 112 | 2 | 369 | 541 | 259 | 445 | 3.74e-24 | 105 |
| MsG0380015408.01.T01 | MTR_2g089100 | 22.759 | 435 | 246 | 11 | 189 | 541 | 16 | 442 | 1.33e-21 | 98.2 |
| MsG0380015408.01.T01 | MTR_4g095500 | 28.431 | 204 | 123 | 2 | 360 | 541 | 265 | 467 | 2.80e-21 | 97.4 |
| MsG0380015408.01.T01 | MTR_2g099110 | 23.238 | 383 | 220 | 11 | 230 | 542 | 73 | 451 | 3.38e-20 | 94.0 |
| MsG0380015408.01.T01 | MTR_2g034250 | 22.250 | 400 | 235 | 11 | 211 | 542 | 194 | 585 | 3.35e-18 | 88.2 |
| MsG0380015408.01.T01 | MTR_3g022580 | 30.864 | 162 | 106 | 2 | 381 | 542 | 28 | 183 | 6.06e-18 | 82.4 |
| MsG0380015408.01.T01 | MTR_2g034260 | 24.543 | 383 | 208 | 14 | 232 | 542 | 211 | 584 | 1.61e-17 | 86.3 |
| MsG0380015408.01.T01 | MTR_5g058860 | 23.822 | 382 | 218 | 11 | 230 | 541 | 118 | 496 | 2.69e-16 | 82.0 |
| MsG0380015408.01.T01 | MTR_7g109580 | 23.560 | 382 | 208 | 14 | 230 | 542 | 188 | 554 | 1.14e-15 | 80.5 |
| MsG0380015408.01.T01 | MTR_2g034280 | 22.047 | 381 | 218 | 12 | 232 | 542 | 204 | 575 | 1.38e-14 | 77.0 |
| MsG0380015408.01.T01 | MTR_0092s0100 | 23.706 | 367 | 213 | 9 | 232 | 542 | 373 | 728 | 2.75e-14 | 76.3 |
| MsG0380015408.01.T01 | MTR_0092s0100 | 23.706 | 367 | 213 | 9 | 232 | 542 | 376 | 731 | 3.01e-14 | 76.3 |
| MsG0380015408.01.T01 | MTR_3g022005 | 37.634 | 93 | 58 | 0 | 450 | 542 | 33 | 125 | 1.94e-13 | 67.8 |
| MsG0380015408.01.T01 | MTR_8g093070 | 26.199 | 271 | 144 | 11 | 308 | 541 | 244 | 495 | 2.73e-12 | 69.7 |
| MsG0380015408.01.T01 | MTR_1g086970 | 26.336 | 262 | 153 | 10 | 311 | 542 | 227 | 478 | 5.08e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015408.01.T01 | AT1G21450 | 52.333 | 600 | 175 | 17 | 33 | 542 | 15 | 593 | 0.0 | 522 |
| MsG0380015408.01.T01 | AT5G48150 | 44.810 | 395 | 159 | 5 | 205 | 542 | 98 | 490 | 4.14e-111 | 340 |
| MsG0380015408.01.T01 | AT5G48150 | 44.810 | 395 | 159 | 5 | 205 | 542 | 98 | 490 | 4.14e-111 | 340 |
| MsG0380015408.01.T01 | AT5G48150 | 44.810 | 395 | 159 | 5 | 205 | 542 | 98 | 490 | 4.14e-111 | 340 |
| MsG0380015408.01.T01 | AT5G48150 | 44.810 | 395 | 159 | 5 | 205 | 542 | 98 | 490 | 4.14e-111 | 340 |
| MsG0380015408.01.T01 | AT1G50600 | 44.935 | 385 | 155 | 5 | 215 | 542 | 142 | 526 | 1.29e-107 | 332 |
| MsG0380015408.01.T01 | AT1G50600 | 44.935 | 385 | 155 | 5 | 215 | 542 | 213 | 597 | 7.06e-107 | 332 |
| MsG0380015408.01.T01 | AT1G50600 | 44.935 | 385 | 155 | 5 | 215 | 542 | 217 | 601 | 9.44e-107 | 332 |
| MsG0380015408.01.T01 | AT2G04890 | 43.243 | 370 | 147 | 4 | 229 | 542 | 51 | 413 | 5.69e-100 | 308 |
| MsG0380015408.01.T01 | AT4G17230 | 41.351 | 370 | 161 | 4 | 229 | 542 | 156 | 525 | 3.55e-94 | 297 |
| MsG0380015408.01.T01 | AT4G17230 | 41.351 | 370 | 161 | 4 | 229 | 542 | 156 | 525 | 3.55e-94 | 297 |
| MsG0380015408.01.T01 | AT5G52510 | 34.309 | 376 | 184 | 6 | 229 | 542 | 266 | 640 | 3.78e-60 | 210 |
| MsG0380015408.01.T01 | AT5G17490 | 30.889 | 450 | 215 | 11 | 169 | 542 | 87 | 516 | 3.00e-46 | 170 |
| MsG0380015408.01.T01 | AT1G66350 | 32.312 | 359 | 187 | 10 | 232 | 542 | 156 | 506 | 1.40e-44 | 165 |
| MsG0380015408.01.T01 | AT3G03450 | 31.436 | 369 | 188 | 9 | 232 | 542 | 184 | 545 | 5.71e-44 | 164 |
| MsG0380015408.01.T01 | AT3G54220 | 30.579 | 363 | 188 | 8 | 234 | 541 | 296 | 649 | 6.21e-41 | 157 |
| MsG0380015408.01.T01 | AT1G07530 | 29.923 | 391 | 213 | 9 | 209 | 541 | 377 | 764 | 7.53e-41 | 157 |
| MsG0380015408.01.T01 | AT5G66770 | 31.903 | 373 | 183 | 11 | 232 | 542 | 221 | 584 | 2.38e-39 | 151 |
| MsG0380015408.01.T01 | AT1G14920 | 28.962 | 366 | 196 | 10 | 232 | 542 | 173 | 529 | 3.50e-37 | 144 |
| MsG0380015408.01.T01 | AT2G01570 | 28.689 | 366 | 197 | 9 | 232 | 542 | 225 | 581 | 3.51e-37 | 145 |
| MsG0380015408.01.T01 | AT3G46600 | 27.027 | 370 | 214 | 5 | 229 | 542 | 2 | 371 | 2.34e-36 | 139 |
| MsG0380015408.01.T01 | AT2G29065 | 27.513 | 378 | 209 | 7 | 229 | 541 | 250 | 627 | 2.90e-36 | 143 |
| MsG0380015408.01.T01 | AT2G29060 | 27.481 | 393 | 215 | 8 | 212 | 541 | 269 | 654 | 1.24e-35 | 141 |
| MsG0380015408.01.T01 | AT2G29060 | 27.481 | 393 | 215 | 8 | 212 | 541 | 306 | 691 | 1.43e-35 | 142 |
| MsG0380015408.01.T01 | AT3G46600 | 27.027 | 370 | 214 | 5 | 229 | 542 | 210 | 579 | 2.12e-35 | 140 |
| MsG0380015408.01.T01 | AT5G59450 | 26.000 | 400 | 234 | 7 | 205 | 542 | 199 | 598 | 2.41e-35 | 140 |
| MsG0380015408.01.T01 | AT3G46600 | 27.027 | 370 | 214 | 5 | 229 | 542 | 178 | 547 | 2.69e-35 | 139 |
| MsG0380015408.01.T01 | AT2G37650 | 26.146 | 371 | 215 | 6 | 229 | 542 | 345 | 713 | 3.70e-33 | 134 |
| MsG0380015408.01.T01 | AT2G37650 | 26.146 | 371 | 215 | 6 | 229 | 542 | 333 | 701 | 4.01e-33 | 134 |
| MsG0380015408.01.T01 | AT1G07520 | 25.063 | 399 | 227 | 8 | 215 | 541 | 294 | 692 | 2.26e-31 | 129 |
| MsG0380015408.01.T01 | AT1G07520 | 25.063 | 399 | 227 | 8 | 215 | 541 | 295 | 693 | 2.39e-31 | 129 |
| MsG0380015408.01.T01 | AT1G07520 | 25.063 | 399 | 227 | 8 | 215 | 541 | 130 | 528 | 2.97e-31 | 127 |
| MsG0380015408.01.T01 | AT1G07520 | 25.063 | 399 | 227 | 8 | 215 | 541 | 130 | 528 | 2.97e-31 | 127 |
| MsG0380015408.01.T01 | AT5G41920 | 26.829 | 369 | 202 | 9 | 231 | 542 | 43 | 400 | 4.83e-31 | 125 |
| MsG0380015408.01.T01 | AT3G50650 | 29.462 | 353 | 177 | 9 | 254 | 542 | 198 | 542 | 1.07e-30 | 126 |
| MsG0380015408.01.T01 | AT4G37650 | 25.708 | 424 | 223 | 14 | 198 | 542 | 119 | 529 | 2.08e-29 | 122 |
| MsG0380015408.01.T01 | AT1G50420 | 37.748 | 151 | 91 | 2 | 394 | 542 | 330 | 479 | 9.01e-28 | 117 |
| MsG0380015408.01.T01 | AT1G55580 | 27.372 | 274 | 151 | 5 | 308 | 542 | 181 | 445 | 4.58e-25 | 108 |
| MsG0380015408.01.T01 | AT1G63100 | 28.528 | 326 | 163 | 8 | 231 | 495 | 277 | 593 | 7.22e-24 | 106 |
| MsG0380015408.01.T01 | AT1G63100 | 28.528 | 326 | 163 | 8 | 231 | 495 | 252 | 568 | 7.36e-24 | 106 |
| MsG0380015408.01.T01 | AT4G08250 | 26.296 | 270 | 153 | 8 | 308 | 541 | 217 | 476 | 4.18e-21 | 97.1 |
| MsG0380015408.01.T01 | AT3G49950 | 22.135 | 384 | 224 | 11 | 229 | 541 | 28 | 407 | 2.81e-17 | 84.7 |
| MsG0380015408.01.T01 | AT5G67411 | 36.937 | 111 | 68 | 2 | 369 | 479 | 90 | 198 | 2.32e-13 | 69.7 |
| MsG0380015408.01.T01 | AT2G45160 | 23.333 | 270 | 171 | 7 | 301 | 542 | 378 | 639 | 1.97e-11 | 67.0 |
Find 119 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATCAGAATAAGAAATT+TGG | 0.160232 | 3:+69738094 | None:intergenic |
| GATACAACCATGTCATTAAT+TGG | 0.223910 | 3:-69738201 | MsG0380015408.01.T01:CDS |
| CCATGTAGGCTGCAATTCTT+TGG | 0.255636 | 3:+69737497 | None:intergenic |
| GAAAAGGGTGCACTTCATTT+TGG | 0.257256 | 3:-69736563 | MsG0380015408.01.T01:CDS |
| ATTGAGGAGGAAGAGGAATA+TGG | 0.277716 | 3:-69737808 | MsG0380015408.01.T01:CDS |
| CATCGAATCTGATCCGAAAT+TGG | 0.287276 | 3:+69737924 | None:intergenic |
| GGTATGAAGTCGCGGGAAAA+TGG | 0.287860 | 3:-69736697 | MsG0380015408.01.T01:CDS |
| GCTACTGATGCTGCTAATAT+TGG | 0.307471 | 3:+69737666 | None:intergenic |
| TTTATCAGAATAAGAAATTT+GGG | 0.308040 | 3:+69738095 | None:intergenic |
| TTGATCCTAACATTATTGAT+TGG | 0.340862 | 3:-69737765 | MsG0380015408.01.T01:CDS |
| GAAATTTGGGAGGACAAATC+AGG | 0.343331 | 3:+69738108 | None:intergenic |
| CGCTTACTTTACTCTCGTGT+TGG | 0.364189 | 3:+69738769 | None:intergenic |
| GGTGCTGATCAGTCCAATTT+CGG | 0.378562 | 3:-69737937 | MsG0380015408.01.T01:CDS |
| TCACTCACATTTGTGCTCAT+TGG | 0.383131 | 3:+69736638 | None:intergenic |
| GTACAAGATAAAGGAGGAAA+AGG | 0.383813 | 3:-69736579 | MsG0380015408.01.T01:CDS |
| GGCAAGAGATATTGTTAATA+CGG | 0.384298 | 3:-69736750 | MsG0380015408.01.T01:CDS |
| GCCGCTCGCCTCGCTGAATC+CGG | 0.387906 | 3:-69737463 | MsG0380015408.01.T01:CDS |
| TCCACGACCGTTACAAGCTT+TGG | 0.389612 | 3:+69736914 | None:intergenic |
| TGATCCTAACATTATTGATT+GGG | 0.392056 | 3:-69737764 | MsG0380015408.01.T01:CDS |
| TCGCCTTGTCGGCACGAAAC+TGG | 0.400630 | 3:+69737963 | None:intergenic |
| CGACGAATTGTCTCAATTCA+AGG | 0.402603 | 3:-69737529 | MsG0380015408.01.T01:CDS |
| CATTCATAAAGAAGTTGCTT+GGG | 0.414263 | 3:+69737610 | None:intergenic |
| AACAGCAGCATATTCTGAAT+TGG | 0.421315 | 3:+69737730 | None:intergenic |
| CTGTGATAGGTACAAGATAA+AGG | 0.425096 | 3:-69736588 | MsG0380015408.01.T01:CDS |
| TTGAGGAGGAAGAGGAATAT+GGG | 0.430418 | 3:-69737807 | MsG0380015408.01.T01:CDS |
| CGAAGCAAGTGTTTGAATCA+TGG | 0.433718 | 3:+69737242 | None:intergenic |
| GTGGATTCAATTGAAGTTGA+TGG | 0.434066 | 3:-69737886 | MsG0380015408.01.T01:CDS |
| TCAGCCCAATCAATAATGTT+AGG | 0.434921 | 3:+69737760 | None:intergenic |
| ACCGTTGAAACGCTCTCGTC+AGG | 0.440496 | 3:+69736980 | None:intergenic |
| CCATCACATGTTAGATTGAC+CGG | 0.440788 | 3:-69737207 | MsG0380015408.01.T01:CDS |
| AAATGCAAGGAACCCTTCTT+CGG | 0.445824 | 3:-69737418 | MsG0380015408.01.T01:CDS |
| TCAGCACCACGTCGCCTTGT+CGG | 0.445887 | 3:+69737952 | None:intergenic |
| ATGCTGCTAATATTGGAATC+TGG | 0.446519 | 3:+69737673 | None:intergenic |
| CATGTAGGCTGCAATTCTTT+GGG | 0.448246 | 3:+69737498 | None:intergenic |
| AAGTTAAGTTGTACTGTGAT+AGG | 0.450787 | 3:-69736601 | MsG0380015408.01.T01:CDS |
| CCAAAGAATTGCAGCCTACA+TGG | 0.451697 | 3:-69737497 | MsG0380015408.01.T01:CDS |
| GAGATCAAAACTAGAAGCAT+TGG | 0.459866 | 3:-69737857 | MsG0380015408.01.T01:CDS |
| TAGTGACATTGAGGAGGAAG+AGG | 0.468158 | 3:-69737815 | MsG0380015408.01.T01:CDS |
| TCTGGAGACGAATACTCCTT+TGG | 0.473491 | 3:+69737691 | None:intergenic |
| TGATTCAAACACTTGCTTCG+AGG | 0.476019 | 3:-69737239 | MsG0380015408.01.T01:CDS |
| TACTCTTCCTAGAGAGAGCC+AGG | 0.477900 | 3:-69736801 | MsG0380015408.01.T01:CDS |
| AGCATATTCTGAATTGGATC+AGG | 0.480387 | 3:+69737736 | None:intergenic |
| CGTCAGGCATGTGATGAAGC+TGG | 0.484030 | 3:+69736996 | None:intergenic |
| TGTTGTATGGTACGGAGTGT+TGG | 0.484134 | 3:-69738803 | MsG0380015408.01.T01:CDS |
| GTTGTATGGTACGGAGTGTT+GGG | 0.485703 | 3:-69738802 | MsG0380015408.01.T01:CDS |
| GCTGCTAGACGGTCCGAAGA+AGG | 0.487260 | 3:+69737405 | None:intergenic |
| TTGCGTGTGAAGGTGAAGAT+AGG | 0.489717 | 3:-69736727 | MsG0380015408.01.T01:CDS |
| TCTCAACATTCATCCTATCC+TGG | 0.491515 | 3:+69736783 | None:intergenic |
| GTTGGAGGACTAAAGATCAT+AGG | 0.492091 | 3:-69737153 | MsG0380015408.01.T01:CDS |
| AGTCAGACGGCAATGTTGTA+TGG | 0.492100 | 3:-69738816 | None:intergenic |
| AGCGATGCAGATACTGTTCG+AGG | 0.503528 | 3:-69737385 | MsG0380015408.01.T01:intron |
| ACGAGACCAACTTCTTCGCT+TGG | 0.503960 | 3:-69736951 | MsG0380015408.01.T01:CDS |
| TTTCGGATCAGATTCGATGA+TGG | 0.505364 | 3:-69737920 | MsG0380015408.01.T01:CDS |
| ACATTCATAAAGAAGTTGCT+TGG | 0.509000 | 3:+69737609 | None:intergenic |
| ATCCTATCCTGGCTCTCTCT+AGG | 0.512100 | 3:+69736794 | None:intergenic |
| TCTTTACCAAGCGAAGAAGT+TGG | 0.520115 | 3:+69736945 | None:intergenic |
| GACGGCAATGTTGTATGGTA+CGG | 0.520538 | 3:-69738811 | None:intergenic |
| TCGCGGGAAAATGGAGAGCT+AGG | 0.521293 | 3:-69736688 | MsG0380015408.01.T01:CDS |
| ACGGATCGCTGCACGGACTC+AGG | 0.523145 | 3:+69737174 | None:intergenic |
| GAGTCCGTGCAGCGATCCGT+TGG | 0.523823 | 3:-69737171 | MsG0380015408.01.T01:CDS |
| GTAGAGATGTCAGAACTAGA+TGG | 0.537559 | 3:+69737985 | None:intergenic |
| TCCAAAGCTTGTAACGGTCG+TGG | 0.538799 | 3:-69736915 | MsG0380015408.01.T01:CDS |
| TCCGTGCAGCGATCCGTTGG+AGG | 0.540174 | 3:-69737168 | MsG0380015408.01.T01:CDS |
| TGGATCTTCTGAGCTACCTC+CGG | 0.544063 | 3:-69738181 | MsG0380015408.01.T01:CDS |
| TTATAGAGCTTTGAAATGCA+AGG | 0.546542 | 3:-69737431 | MsG0380015408.01.T01:CDS |
| TACAAGATAAAGGAGGAAAA+GGG | 0.547340 | 3:-69736578 | MsG0380015408.01.T01:CDS |
| AGAGCTAGGATGACAATGGC+TGG | 0.548519 | 3:-69736674 | MsG0380015408.01.T01:CDS |
| GTTCTTCTGTATGCGAGTCA+TGG | 0.548521 | 3:+69738016 | None:intergenic |
| CTGCTAGACGGTCCGAAGAA+GGG | 0.550335 | 3:+69737406 | None:intergenic |
| CACTAAGCTCTACTCGCTAC+AGG | 0.550442 | 3:-69738145 | MsG0380015408.01.T01:CDS |
| CTACCAGTTTCGTGCCGACA+AGG | 0.551302 | 3:-69737966 | MsG0380015408.01.T01:CDS |
| ACTTGATTGTTGCTTCAGCA+TGG | 0.554425 | 3:-69736526 | MsG0380015408.01.T01:CDS |
| GAGCAACTAGCAGAAGCACT+TGG | 0.557254 | 3:-69737120 | MsG0380015408.01.T01:intron |
| ACTTGATGATAGTGACATTG+AGG | 0.558721 | 3:-69737824 | MsG0380015408.01.T01:CDS |
| ATATGGGAATTCTCAAAGCA+TGG | 0.559713 | 3:-69737791 | MsG0380015408.01.T01:CDS |
| CCGGTCAATCTAACATGTGA+TGG | 0.566500 | 3:+69737207 | None:intergenic |
| CATCACATGTTAGATTGACC+GGG | 0.567991 | 3:-69737206 | MsG0380015408.01.T01:CDS |
| AATTGCAGCCTACATGGTGG+AGG | 0.577669 | 3:-69737491 | MsG0380015408.01.T01:CDS |
| AAATTTGGGAGGACAAATCA+GGG | 0.579015 | 3:+69738109 | None:intergenic |
| AAGTAAGCGTAGCGGAGATG+AGG | 0.580011 | 3:-69738755 | MsG0380015408.01.T01:CDS |
| TAGGCTGCAATTCTTTGGGA+AGG | 0.583102 | 3:+69737502 | None:intergenic |
| TCCTCCAACGGATCGCTGCA+CGG | 0.583327 | 3:+69737167 | None:intergenic |
| GAATGTTGAGAGGCAATGCT+TGG | 0.583862 | 3:-69736771 | MsG0380015408.01.T01:CDS |
| TGTGCTACTGCAATTTCAGA+AGG | 0.584377 | 3:-69737589 | MsG0380015408.01.T01:CDS |
| GCCTGACGAGAGCGTTTCAA+CGG | 0.590858 | 3:-69736981 | MsG0380015408.01.T01:CDS |
| TCCGGATTCAGCGAGGCGAG+CGG | 0.592435 | 3:+69737462 | None:intergenic |
| AGGATGTTGCGTGTGGAGAG+TGG | 0.594315 | 3:-69738735 | MsG0380015408.01.T01:intron |
| GTTAATACGGTTGCGTGTGA+AGG | 0.601943 | 3:-69736737 | MsG0380015408.01.T01:CDS |
| AATACTCCTTTGGTGAGTCA+TGG | 0.604923 | 3:+69737701 | None:intergenic |
| TATGATCTTTAGTCCTCCAA+CGG | 0.609253 | 3:+69737155 | None:intergenic |
| GTATCTGCATCGCTGCTAGA+CGG | 0.609923 | 3:+69737394 | None:intergenic |
| ATTCATAAAGAAGTTGCTTG+GGG | 0.610084 | 3:+69737611 | None:intergenic |
| ATAGAACGGTATGAAGTCGC+GGG | 0.612894 | 3:-69736704 | MsG0380015408.01.T01:CDS |
| GATAGAACGGTATGAAGTCG+CGG | 0.616637 | 3:-69736705 | MsG0380015408.01.T01:CDS |
| GGACTCAGGATCATCAATCC+CGG | 0.619156 | 3:+69737188 | None:intergenic |
| TCGTCGTGGAGAAGCTCTTG+TGG | 0.619304 | 3:-69737032 | MsG0380015408.01.T01:intron |
| CCTTTGGTGAGTCATGGTCA+TGG | 0.621918 | 3:+69737707 | None:intergenic |
| TTTGAATCCAAAGCTTGTAA+CGG | 0.624695 | 3:-69736921 | MsG0380015408.01.T01:CDS |
| AAGGTGAAGATAGGATAGAA+CGG | 0.625100 | 3:-69736718 | MsG0380015408.01.T01:CDS |
| TTCCTAGAGAGAGCCAGGAT+AGG | 0.625909 | 3:-69736796 | MsG0380015408.01.T01:CDS |
| ATCAGAATAAGAAATTTGGG+AGG | 0.632444 | 3:+69738098 | None:intergenic |
| AGAAGATCCAATTAATGACA+TGG | 0.650375 | 3:+69738194 | None:intergenic |
| ATTGCAGCCTACATGGTGGA+GGG | 0.650477 | 3:-69737490 | MsG0380015408.01.T01:CDS |
| GGCGAGTCCCTCCACCATGT+AGG | 0.652264 | 3:+69737483 | None:intergenic |
| TTCATAAAGAAGTTGCTTGG+GGG | 0.656482 | 3:+69737612 | None:intergenic |
| AGGATAGGATGAATGTTGAG+AGG | 0.660140 | 3:-69736781 | MsG0380015408.01.T01:CDS |
| TGATGATAGTGACATTGAGG+AGG | 0.661914 | 3:-69737821 | MsG0380015408.01.T01:CDS |
| AATTTCAGAAGGAAATGAAG+AGG | 0.662867 | 3:-69737578 | MsG0380015408.01.T01:CDS |
| ATGGAGAGCTAGGATGACAA+TGG | 0.667953 | 3:-69736678 | MsG0380015408.01.T01:CDS |
| CCATGACCATGACTCACCAA+AGG | 0.671972 | 3:-69737707 | MsG0380015408.01.T01:CDS |
| CTTGAATTGAGACAATTCGT+CGG | 0.672967 | 3:+69737530 | None:intergenic |
| AAGAATTGCAGCCTACATGG+TGG | 0.682524 | 3:-69737494 | MsG0380015408.01.T01:CDS |
| TTCGTGCCGACAAGGCGACG+TGG | 0.686779 | 3:-69737958 | MsG0380015408.01.T01:CDS |
| GTATGGTACGGAGTGTTGGG+CGG | 0.690097 | 3:-69738799 | MsG0380015408.01.T01:CDS |
| TGATAGGTACAAGATAAAGG+AGG | 0.692576 | 3:-69736585 | MsG0380015408.01.T01:CDS |
| GATGATGGAAAATCGAAACG+TGG | 0.720441 | 3:-69737905 | MsG0380015408.01.T01:CDS |
| GGAGATGAGGATGTTGCGTG+TGG | 0.720962 | 3:-69738742 | MsG0380015408.01.T01:CDS |
| CGAGAGTAAAGTAAGCGTAG+CGG | 0.726842 | 3:-69738763 | MsG0380015408.01.T01:CDS |
| TGATTGTTGCTTCAGCATGG+AGG | 0.748962 | 3:-69736523 | MsG0380015408.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATAACAAAAATTTCT+AGG | - | Chr3:69737688-69737707 | MsG0380015408.01.T01:CDS | 15.0% |
| !! | TTTATCAGAATAAGAAATTT+GGG | + | Chr3:69737232-69737251 | None:intergenic | 15.0% |
| !!! | AGAAATTTTTGTTATTTCTT+TGG | + | Chr3:69737688-69737707 | None:intergenic | 15.0% |
| !! | GTTTATCAGAATAAGAAATT+TGG | + | Chr3:69737233-69737252 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTATTTCTTTGG+TGG | + | Chr3:69737685-69737704 | None:intergenic | 20.0% |
| !!! | ATAAACCCAAATTTAAAACA+CGG | + | Chr3:69737970-69737989 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGATATCAATCA+AGG | - | Chr3:69738045-69738064 | MsG0380015408.01.T01:CDS | 20.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | Chr3:69736818-69736837 | MsG0380015408.01.T01:CDS | 25.0% |
| ! | GAATTCTTGTTGAAATTTCT+AGG | + | Chr3:69736986-69737005 | None:intergenic | 25.0% |
| ! | GTTCTATCAAATACCATATT+TGG | + | Chr3:69736858-69736877 | None:intergenic | 25.0% |
| ! | TATTTGATAGAACATTATGG+CGG | - | Chr3:69736865-69736884 | MsG0380015408.01.T01:CDS | 25.0% |
| ! | TGGTATTTGATAGAACATTA+TGG | - | Chr3:69736862-69736881 | MsG0380015408.01.T01:CDS | 25.0% |
| ! | TTGATCCTAACATTATTGAT+TGG | - | Chr3:69737559-69737578 | MsG0380015408.01.T01:CDS | 25.0% |
| ! | TTGTTGACCATATATTATCA+AGG | - | Chr3:69737025-69737044 | MsG0380015408.01.T01:intron | 25.0% |
| !! | TGATCCTAACATTATTGATT+GGG | - | Chr3:69737560-69737579 | MsG0380015408.01.T01:CDS | 25.0% |
| !! | TTGATAATATATGGTCAACA+AGG | + | Chr3:69737026-69737045 | None:intergenic | 25.0% |
| !! | TTTCTGACCTTGATAATATA+TGG | + | Chr3:69737035-69737054 | None:intergenic | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | + | Chr3:69736811-69736830 | None:intergenic | 25.0% |
| !!! | AGCTCTATAAATACTTTTTC+CGG | + | Chr3:69737883-69737902 | None:intergenic | 25.0% |
| !!! | AGTACAACTTAACTTGTTTT+CGG | + | Chr3:69738718-69738737 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | Chr3:69736677-69736696 | MsG0380015408.01.T01:CDS | 25.0% |
| !!! | TTTGTCCGTGTTTTAAATTT+GGG | - | Chr3:69737962-69737981 | MsG0380015408.01.T01:CDS | 25.0% |
| AATTTCAGAAGGAAATGAAG+AGG | - | Chr3:69737746-69737765 | MsG0380015408.01.T01:CDS | 30.0% | |
| ACATTCATAAAGAAGTTGCT+TGG | + | Chr3:69737718-69737737 | None:intergenic | 30.0% | |
| AGAAAGCAAAAACTAAAGCT+TGG | - | Chr3:69737050-69737069 | MsG0380015408.01.T01:intron | 30.0% | |
| AGAAGATCCAATTAATGACA+TGG | + | Chr3:69737133-69737152 | None:intergenic | 30.0% | |
| ATCAGAATAAGAAATTTGGG+AGG | + | Chr3:69737229-69737248 | None:intergenic | 30.0% | |
| ATTCATAAAGAAGTTGCTTG+GGG | + | Chr3:69737716-69737735 | None:intergenic | 30.0% | |
| CATTCATAAAGAAGTTGCTT+GGG | + | Chr3:69737717-69737736 | None:intergenic | 30.0% | |
| GATACAACCATGTCATTAAT+TGG | - | Chr3:69737123-69737142 | MsG0380015408.01.T01:CDS | 30.0% | |
| GGCAAGAGATATTGTTAATA+CGG | - | Chr3:69738574-69738593 | MsG0380015408.01.T01:intron | 30.0% | |
| TACAAGATAAAGGAGGAAAA+GGG | - | Chr3:69738746-69738765 | MsG0380015408.01.T01:CDS | 30.0% | |
| TCAACAAATCTCTGCAAAAA+CGG | + | Chr3:69738461-69738480 | None:intergenic | 30.0% | |
| TTTGAATCCAAAGCTTGTAA+CGG | - | Chr3:69738403-69738422 | MsG0380015408.01.T01:intron | 30.0% | |
| ! | AAGTTAAGTTGTACTGTGAT+AGG | - | Chr3:69738723-69738742 | MsG0380015408.01.T01:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | Chr3:69736823-69736842 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | Chr3:69736801-69736820 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | Chr3:69736673-69736692 | None:intergenic | 30.0% |
| !! | GTTTGTCCGTGTTTTAAATT+TGG | - | Chr3:69737961-69737980 | MsG0380015408.01.T01:CDS | 30.0% |
| !! | TTAGTGTTTTTATGTGATGC+CGG | + | Chr3:69737165-69737184 | None:intergenic | 30.0% |
| !! | TTATAGAGCTTTGAAATGCA+AGG | - | Chr3:69737893-69737912 | MsG0380015408.01.T01:CDS | 30.0% |
| AAATTTGGGAGGACAAATCA+GGG | + | Chr3:69737218-69737237 | None:intergenic | 35.0% | |
| AACAAATCTCTGCAAAAACG+GGG | + | Chr3:69738459-69738478 | None:intergenic | 35.0% | |
| AACAGCAGCATATTCTGAAT+TGG | + | Chr3:69737597-69737616 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | Chr3:69736746-69736765 | MsG0380015408.01.T01:CDS | 35.0% | |
| AAGGTGAAGATAGGATAGAA+CGG | - | Chr3:69738606-69738625 | MsG0380015408.01.T01:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | Chr3:69736614-69736633 | MsG0380015408.01.T01:CDS | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | Chr3:69736830-69736849 | MsG0380015408.01.T01:CDS | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | Chr3:69736666-69736685 | MsG0380015408.01.T01:CDS | 35.0% | |
| AGCATATTCTGAATTGGATC+AGG | + | Chr3:69737591-69737610 | None:intergenic | 35.0% | |
| ATATGGGAATTCTCAAAGCA+TGG | - | Chr3:69737533-69737552 | MsG0380015408.01.T01:CDS | 35.0% | |
| ATGCTGCTAATATTGGAATC+TGG | + | Chr3:69737654-69737673 | None:intergenic | 35.0% | |
| CAACAAATCTCTGCAAAAAC+GGG | + | Chr3:69738460-69738479 | None:intergenic | 35.0% | |
| CTGTGATAGGTACAAGATAA+AGG | - | Chr3:69738736-69738755 | MsG0380015408.01.T01:CDS | 35.0% | |
| CTTGAATTGAGACAATTCGT+CGG | + | Chr3:69737797-69737816 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | Chr3:69736691-69736710 | MsG0380015408.01.T01:CDS | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | Chr3:69736743-69736762 | MsG0380015408.01.T01:CDS | 35.0% | |
| GTACAAGATAAAGGAGGAAA+AGG | - | Chr3:69738745-69738764 | MsG0380015408.01.T01:CDS | 35.0% | |
| GTGGATTCAATTGAAGTTGA+TGG | - | Chr3:69737438-69737457 | MsG0380015408.01.T01:CDS | 35.0% | |
| GTTTGTCATTGAATTTCGAG+CGG | - | Chr3:69738226-69738245 | MsG0380015408.01.T01:intron | 35.0% | |
| TATGATCTTTAGTCCTCCAA+CGG | + | Chr3:69738172-69738191 | None:intergenic | 35.0% | |
| TCAGCCCAATCAATAATGTT+AGG | + | Chr3:69737567-69737586 | None:intergenic | 35.0% | |
| TGATAGGTACAAGATAAAGG+AGG | - | Chr3:69738739-69738758 | MsG0380015408.01.T01:CDS | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | Chr3:69736686-69736705 | MsG0380015408.01.T01:CDS | 35.0% | |
| TTCATAAAGAAGTTGCTTGG+GGG | + | Chr3:69737715-69737734 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | Chr3:69736742-69736761 | None:intergenic | 35.0% | |
| ! | ACTTGATGATAGTGACATTG+AGG | - | Chr3:69737500-69737519 | MsG0380015408.01.T01:CDS | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | Chr3:69736842-69736861 | MsG0380015408.01.T01:CDS | 35.0% |
| ! | GAGATCAAAACTAGAAGCAT+TGG | - | Chr3:69737467-69737486 | MsG0380015408.01.T01:CDS | 35.0% |
| ! | GTTTTCTTTGTATCTCCATC+AGG | - | Chr3:69736950-69736969 | MsG0380015408.01.T01:CDS | 35.0% |
| !! | TGAAATTTCTAGGATGACTG+TGG | + | Chr3:69736976-69736995 | None:intergenic | 35.0% |
| AAATGCAAGGAACCCTTCTT+CGG | - | Chr3:69737906-69737925 | MsG0380015408.01.T01:CDS | 40.0% | |
| AATACTCCTTTGGTGAGTCA+TGG | + | Chr3:69737626-69737645 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | Chr3:69736641-69736660 | MsG0380015408.01.T01:CDS | 40.0% | |
| AGGATAGGATGAATGTTGAG+AGG | - | Chr3:69738543-69738562 | MsG0380015408.01.T01:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | Chr3:69736771-69736790 | MsG0380015408.01.T01:CDS | 40.0% | |
| ATTGAGGAGGAAGAGGAATA+TGG | - | Chr3:69737516-69737535 | MsG0380015408.01.T01:CDS | 40.0% | |
| CATCACATGTTAGATTGACC+GGG | - | Chr3:69738118-69738137 | MsG0380015408.01.T01:CDS | 40.0% | |
| CATCGAATCTGATCCGAAAT+TGG | + | Chr3:69737403-69737422 | None:intergenic | 40.0% | |
| CATGTAGGCTGCAATTCTTT+GGG | + | Chr3:69737829-69737848 | None:intergenic | 40.0% | |
| CCATCACATGTTAGATTGAC+CGG | - | Chr3:69738117-69738136 | MsG0380015408.01.T01:CDS | 40.0% | |
| CGAAGCAAGTGTTTGAATCA+TGG | + | Chr3:69738085-69738104 | None:intergenic | 40.0% | |
| CGACGAATTGTCTCAATTCA+AGG | - | Chr3:69737795-69737814 | MsG0380015408.01.T01:CDS | 40.0% | |
| GAAATTTGGGAGGACAAATC+AGG | + | Chr3:69737219-69737238 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | Chr3:69736640-69736659 | MsG0380015408.01.T01:CDS | 40.0% | |
| GCTACTGATGCTGCTAATAT+TGG | + | Chr3:69737661-69737680 | None:intergenic | 40.0% | |
| GTAGAGATGTCAGAACTAGA+TGG | + | Chr3:69737342-69737361 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | Chr3:69736608-69736627 | MsG0380015408.01.T01:CDS | 40.0% | |
| GTTGGAGGACTAAAGATCAT+AGG | - | Chr3:69738171-69738190 | MsG0380015408.01.T01:CDS | 40.0% | |
| TCACTCACATTTGTGCTCAT+TGG | + | Chr3:69738689-69738708 | None:intergenic | 40.0% | |
| TCTCAACATTCATCCTATCC+TGG | + | Chr3:69738544-69738563 | None:intergenic | 40.0% | |
| TCTTTACCAAGCGAAGAAGT+TGG | + | Chr3:69738382-69738401 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | Chr3:69736639-69736658 | MsG0380015408.01.T01:CDS | 40.0% | |
| TGATTCAAACACTTGCTTCG+AGG | - | Chr3:69738085-69738104 | MsG0380015408.01.T01:CDS | 40.0% | |
| TTGAGGAGGAAGAGGAATAT+GGG | - | Chr3:69737517-69737536 | MsG0380015408.01.T01:CDS | 40.0% | |
| TTTCGGATCAGATTCGATGA+TGG | - | Chr3:69737404-69737423 | MsG0380015408.01.T01:CDS | 40.0% | |
| ! | ACTTGATTGTTGCTTCAGCA+TGG | - | Chr3:69738798-69738817 | MsG0380015408.01.T01:CDS | 40.0% |
| ! | TGATGATAGTGACATTGAGG+AGG | - | Chr3:69737503-69737522 | MsG0380015408.01.T01:CDS | 40.0% |
| ! | TGTGCTACTGCAATTTCAGA+AGG | - | Chr3:69737735-69737754 | MsG0380015408.01.T01:CDS | 40.0% |
| !! | GAAAAGGGTGCACTTCATTT+TGG | - | Chr3:69738761-69738780 | MsG0380015408.01.T01:CDS | 40.0% |
| !! | GATGATGGAAAATCGAAACG+TGG | - | Chr3:69737419-69737438 | MsG0380015408.01.T01:CDS | 40.0% |
| AAGAATTGCAGCCTACATGG+TGG | - | Chr3:69737830-69737849 | MsG0380015408.01.T01:CDS | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | Chr3:69736755-69736774 | MsG0380015408.01.T01:CDS | 45.0% | |
| ATAGAACGGTATGAAGTCGC+GGG | - | Chr3:69738620-69738639 | MsG0380015408.01.T01:intron | 45.0% | |
| ATGGAGAGCTAGGATGACAA+TGG | - | Chr3:69738646-69738665 | MsG0380015408.01.T01:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | Chr3:69736642-69736661 | MsG0380015408.01.T01:CDS | 45.0% | |
| CCAAAGAATTGCAGCCTACA+TGG | - | Chr3:69737827-69737846 | MsG0380015408.01.T01:CDS | 45.0% | |
| CCATGTAGGCTGCAATTCTT+TGG | + | Chr3:69737830-69737849 | None:intergenic | 45.0% | |
| CCGGTCAATCTAACATGTGA+TGG | + | Chr3:69738120-69738139 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | Chr3:69736561-69736580 | MsG0380015408.01.T01:CDS | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | Chr3:69736558-69736577 | None:intergenic | 45.0% | |
| GAATGTTGAGAGGCAATGCT+TGG | - | Chr3:69738553-69738572 | MsG0380015408.01.T01:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | Chr3:69736765-69736784 | MsG0380015408.01.T01:CDS | 45.0% | |
| GATAGAACGGTATGAAGTCG+CGG | - | Chr3:69738619-69738638 | MsG0380015408.01.T01:intron | 45.0% | |
| GTTAATACGGTTGCGTGTGA+AGG | - | Chr3:69738587-69738606 | MsG0380015408.01.T01:intron | 45.0% | |
| GTTCTTCTGTATGCGAGTCA+TGG | + | Chr3:69737311-69737330 | None:intergenic | 45.0% | |
| TAGTGACATTGAGGAGGAAG+AGG | - | Chr3:69737509-69737528 | MsG0380015408.01.T01:CDS | 45.0% | |
| TCTGGAGACGAATACTCCTT+TGG | + | Chr3:69737636-69737655 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | Chr3:69736521-69736540 | MsG0380015408.01.T01:CDS | 45.0% | |
| TTGCGTGTGAAGGTGAAGAT+AGG | - | Chr3:69738597-69738616 | MsG0380015408.01.T01:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | Chr3:69736911-69736930 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | Chr3:69736912-69736931 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | Chr3:69736522-69736541 | MsG0380015408.01.T01:CDS | 45.0% |
| ! | TAGGCTGCAATTCTTTGGGA+AGG | + | Chr3:69737825-69737844 | None:intergenic | 45.0% |
| ! | TGATTGTTGCTTCAGCATGG+AGG | - | Chr3:69738801-69738820 | MsG0380015408.01.T01:CDS | 45.0% |
| !! | ACGACAATCAAGCATCGATG+AGG | + | Chr3:69738276-69738295 | None:intergenic | 45.0% |
| !! | AGGGTGCACTTCATTTTGGT+TGG | - | Chr3:69738765-69738784 | MsG0380015408.01.T01:CDS | 45.0% |
| !! | GGTGCTGATCAGTCCAATTT+CGG | - | Chr3:69737387-69737406 | MsG0380015408.01.T01:CDS | 45.0% |
| !! | GTGTTTTTATGTGATGCCGG+AGG | + | Chr3:69737162-69737181 | None:intergenic | 45.0% |
| !!! | GGGTGCACTTCATTTTGGTT+GGG | - | Chr3:69738766-69738785 | MsG0380015408.01.T01:CDS | 45.0% |
| !!! | TACTTTTTCCGGATTCAGCG+AGG | + | Chr3:69737872-69737891 | None:intergenic | 45.0% |
| AATTGCAGCCTACATGGTGG+AGG | - | Chr3:69737833-69737852 | MsG0380015408.01.T01:CDS | 50.0% | |
| AATTTCGAGCGGTCTCATCG+AGG | - | Chr3:69738237-69738256 | MsG0380015408.01.T01:intron | 50.0% | |
| ACGAGACCAACTTCTTCGCT+TGG | - | Chr3:69738373-69738392 | MsG0380015408.01.T01:intron | 50.0% | |
| AGAGAAGACAATAGACGCCG+TGG | - | Chr3:69736722-69736741 | MsG0380015408.01.T01:CDS | 50.0% | |
| AGAGCTAGGATGACAATGGC+TGG | - | Chr3:69738650-69738669 | MsG0380015408.01.T01:intron | 50.0% | |
| AGCGATGCAGATACTGTTCG+AGG | - | Chr3:69737939-69737958 | MsG0380015408.01.T01:CDS | 50.0% | |
| CACTAAGCTCTACTCGCTAC+AGG | - | Chr3:69737179-69737198 | MsG0380015408.01.T01:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | Chr3:69736910-69736929 | MsG0380015408.01.T01:CDS | 50.0% | |
| CCATGACCATGACTCACCAA+AGG | - | Chr3:69737617-69737636 | MsG0380015408.01.T01:CDS | 50.0% | |
| CCTTTGGTGAGTCATGGTCA+TGG | + | Chr3:69737620-69737639 | None:intergenic | 50.0% | |
| CTGCAAAAACGGGGCAGTAT+TGG | + | Chr3:69738450-69738469 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | Chr3:69736907-69736926 | None:intergenic | 50.0% | |
| GGACTCAGGATCATCAATCC+CGG | + | Chr3:69738139-69738158 | None:intergenic | 50.0% | |
| GGTATGAAGTCGCGGGAAAA+TGG | - | Chr3:69738627-69738646 | MsG0380015408.01.T01:intron | 50.0% | |
| GTATCTGCATCGCTGCTAGA+CGG | + | Chr3:69737933-69737952 | None:intergenic | 50.0% | |
| TACTCTTCCTAGAGAGAGCC+AGG | - | Chr3:69738523-69738542 | MsG0380015408.01.T01:intron | 50.0% | |
| TCCAAAGCTTGTAACGGTCG+TGG | - | Chr3:69738409-69738428 | MsG0380015408.01.T01:intron | 50.0% | |
| TCCACGACCGTTACAAGCTT+TGG | + | Chr3:69738413-69738432 | None:intergenic | 50.0% | |
| TCGATGCTTGATTGTCGTCG+TGG | - | Chr3:69738278-69738297 | MsG0380015408.01.T01:intron | 50.0% | |
| TGGATCTTCTGAGCTACCTC+CGG | - | Chr3:69737143-69737162 | MsG0380015408.01.T01:CDS | 50.0% | |
| TTCCTAGAGAGAGCCAGGAT+AGG | - | Chr3:69738528-69738547 | MsG0380015408.01.T01:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | Chr3:69736569-69736588 | MsG0380015408.01.T01:CDS | 50.0% |
| ! | ATCCTATCCTGGCTCTCTCT+AGG | + | Chr3:69738533-69738552 | None:intergenic | 50.0% |
| ! | ATTGCAGCCTACATGGTGGA+GGG | - | Chr3:69737834-69737853 | MsG0380015408.01.T01:CDS | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | Chr3:69736913-69736932 | None:intergenic | 50.0% |
| !! | GAGCAACTAGCAGAAGCACT+TGG | - | Chr3:69738204-69738223 | MsG0380015408.01.T01:intron | 50.0% |
| ACCGTTGAAACGCTCTCGTC+AGG | + | Chr3:69738347-69738366 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | Chr3:69736899-69736918 | None:intergenic | 55.0% | |
| AGGATGTTGCGTGTGGAGAG+TGG | - | Chr3:69736589-69736608 | MsG0380015408.01.T01:CDS | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | Chr3:69736898-69736917 | MsG0380015408.01.T01:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | Chr3:69736905-69736924 | MsG0380015408.01.T01:CDS | 55.0% | |
| CGTCAGGCATGTGATGAAGC+TGG | + | Chr3:69738331-69738350 | None:intergenic | 55.0% | |
| CTAGGATGACTGTGGCCTGA+TGG | + | Chr3:69736968-69736987 | None:intergenic | 55.0% | |
| CTGCTAGACGGTCCGAAGAA+GGG | + | Chr3:69737921-69737940 | None:intergenic | 55.0% | |
| GGAGATGAGGATGTTGCGTG+TGG | - | Chr3:69736582-69736601 | MsG0380015408.01.T01:CDS | 55.0% | |
| TCGCGGGAAAATGGAGAGCT+AGG | - | Chr3:69738636-69738655 | MsG0380015408.01.T01:intron | 55.0% | |
| TCGTCGTGGAGAAGCTCTTG+TGG | - | Chr3:69738292-69738311 | MsG0380015408.01.T01:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | Chr3:69736899-69736918 | MsG0380015408.01.T01:CDS | 55.0% | |
| ! | CTACCAGTTTCGTGCCGACA+AGG | - | Chr3:69737358-69737377 | MsG0380015408.01.T01:intron | 55.0% |
| !! | GCCTGACGAGAGCGTTTCAA+CGG | - | Chr3:69738343-69738362 | MsG0380015408.01.T01:intron | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | Chr3:69736525-69736544 | MsG0380015408.01.T01:CDS | 55.0% |
| GCTGCTAGACGGTCCGAAGA+AGG | + | Chr3:69737922-69737941 | None:intergenic | 60.0% | |
| TCAGCACCACGTCGCCTTGT+CGG | + | Chr3:69737375-69737394 | None:intergenic | 60.0% | |
| TCCTCCAACGGATCGCTGCA+CGG | + | Chr3:69738160-69738179 | None:intergenic | 60.0% | |
| TCGCCTTGTCGGCACGAAAC+TGG | + | Chr3:69737364-69737383 | None:intergenic | 60.0% | |
| ACGGATCGCTGCACGGACTC+AGG | + | Chr3:69738153-69738172 | None:intergenic | 65.0% | |
| GAGTCCGTGCAGCGATCCGT+TGG | - | Chr3:69738153-69738172 | MsG0380015408.01.T01:CDS | 65.0% | |
| GGCGAGTCCCTCCACCATGT+AGG | + | Chr3:69737844-69737863 | None:intergenic | 65.0% | |
| TCCGGATTCAGCGAGGCGAG+CGG | + | Chr3:69737865-69737884 | None:intergenic | 65.0% | |
| TCCGTGCAGCGATCCGTTGG+AGG | - | Chr3:69738156-69738175 | MsG0380015408.01.T01:CDS | 65.0% | |
| ! | TTCGTGCCGACAAGGCGACG+TGG | - | Chr3:69737366-69737385 | MsG0380015408.01.T01:intron | 65.0% |
| GCCGCTCGCCTCGCTGAATC+CGG | - | Chr3:69737861-69737880 | MsG0380015408.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 69736520 | 69738826 | 69736520 | ID=MsG0380015408.01;Name=MsG0380015408.01 |
| Chr3 | mRNA | 69736520 | 69738826 | 69736520 | ID=MsG0380015408.01.T01;Parent=MsG0380015408.01;Name=MsG0380015408.01.T01;_AED=0.31;_eAED=0.35;_QI=0|0|0|1|1|1|4|0|542 |
| Chr3 | exon | 69738736 | 69738826 | 69738736 | ID=MsG0380015408.01.T01:exon:13798;Parent=MsG0380015408.01.T01 |
| Chr3 | exon | 69737386 | 69738222 | 69737386 | ID=MsG0380015408.01.T01:exon:13797;Parent=MsG0380015408.01.T01 |
| Chr3 | exon | 69737121 | 69737297 | 69737121 | ID=MsG0380015408.01.T01:exon:13796;Parent=MsG0380015408.01.T01 |
| Chr3 | exon | 69736520 | 69737043 | 69736520 | ID=MsG0380015408.01.T01:exon:13795;Parent=MsG0380015408.01.T01 |
| Chr3 | CDS | 69738736 | 69738826 | 69738736 | ID=MsG0380015408.01.T01:cds;Parent=MsG0380015408.01.T01 |
| Chr3 | CDS | 69737386 | 69738222 | 69737386 | ID=MsG0380015408.01.T01:cds;Parent=MsG0380015408.01.T01 |
| Chr3 | CDS | 69737121 | 69737297 | 69737121 | ID=MsG0380015408.01.T01:cds;Parent=MsG0380015408.01.T01 |
| Chr3 | CDS | 69736520 | 69737043 | 69736520 | ID=MsG0380015408.01.T01:cds;Parent=MsG0380015408.01.T01 |
| Gene Sequence |
| Protein sequence |
