AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046038.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046038.01.T01 MTR_4g098450 99.487 195 1 0 1 195 12 206 9.58e-139 389
MsG0880046038.01.T01 MTR_7g080980 83.108 148 24 1 49 195 40 187 2.79e-61 192
MsG0880046038.01.T01 MTR_5g091630 68.085 141 44 1 55 195 38 177 2.45e-55 176
MsG0880046038.01.T01 MTR_1g044155 72.593 135 37 0 61 195 122 256 5.56e-55 178
MsG0880046038.01.T01 MTR_8g036060 60.714 196 68 1 9 195 21 216 6.41e-55 177
MsG0880046038.01.T01 MTR_1g073860 68.889 135 42 0 61 195 90 224 1.25e-53 174
MsG0880046038.01.T01 MTR_5g011520 74.815 135 34 0 61 195 96 230 1.90e-51 168
MsG0880046038.01.T01 MTR_3g068035 73.016 126 34 0 70 195 84 209 5.17e-50 164
MsG0880046038.01.T01 MTR_1g079810 68.702 131 41 0 65 195 74 204 5.39e-50 164
MsG0880046038.01.T01 MTR_3g100470 43.939 198 91 6 4 195 25 208 9.74e-46 152
MsG0880046038.01.T01 MTR_5g080580 65.079 126 44 0 70 195 94 219 4.34e-40 139
MsG0880046038.01.T01 MTR_5g066020 41.361 191 94 6 12 195 7 186 1.39e-34 123
MsG0880046038.01.T01 MTR_5g089600 37.762 143 78 2 65 196 77 219 3.47e-27 103
MsG0880046038.01.T01 MTR_4g057487 36.170 141 80 3 65 195 17 157 6.83e-22 89.7
MsG0880046038.01.T01 MTR_5g089700 34.532 139 82 1 65 194 75 213 1.13e-21 89.0
MsG0880046038.01.T01 MTR_4g057525 36.879 141 79 3 65 195 36 176 4.00e-21 87.8
MsG0880046038.01.T01 MTR_5g010330 38.235 136 77 4 65 194 104 238 1.68e-20 87.4
MsG0880046038.01.T01 MTR_5g089090 35.570 149 80 2 59 196 22 165 3.02e-20 84.7
MsG0880046038.01.T01 MTR_1g032910 36.364 143 79 3 65 195 101 243 1.95e-19 84.0
MsG0880046038.01.T01 MTR_1g053685 34.043 141 84 2 65 196 85 225 2.51e-19 83.6
MsG0880046038.01.T01 MTR_6g061670 42.202 109 56 2 92 195 130 236 3.53e-19 83.6
MsG0880046038.01.T01 MTR_6g061670 42.202 109 56 2 92 195 125 231 3.85e-19 83.6
MsG0880046038.01.T01 MTR_1g061530 43.810 105 55 2 95 195 144 248 1.73e-18 82.4
MsG0880046038.01.T01 MTR_7g074935 50.746 67 33 0 95 161 130 196 5.17e-18 80.9
MsG0880046038.01.T01 MTR_4g098460 35.616 146 77 4 57 194 49 185 2.94e-17 78.2
MsG0880046038.01.T01 MTR_1g079780 34.400 125 78 2 74 194 88 212 8.83e-17 77.4
MsG0880046038.01.T01 MTR_8g036160 45.714 70 38 0 92 161 142 211 1.01e-16 77.4
MsG0880046038.01.T01 MTR_1g076710 38.158 152 70 5 65 195 91 239 2.94e-16 75.9
MsG0880046038.01.T01 MTR_8g031100 40.000 110 61 2 56 160 114 223 3.35e-16 75.9
MsG0880046038.01.T01 MTR_4g098460 34.667 150 78 4 57 194 49 190 8.84e-16 73.9
MsG0880046038.01.T01 MTR_7g077120 37.681 138 76 3 65 194 127 262 1.32e-15 73.9
MsG0880046038.01.T01 MTR_4g101990 46.269 67 36 0 95 161 147 213 2.39e-15 73.2
MsG0880046038.01.T01 MTR_8g098390 37.168 113 67 3 84 193 158 269 3.42e-15 72.8
MsG0880046038.01.T01 MTR_4g069110 33.333 102 68 0 58 159 27 128 4.72e-15 70.1
MsG0880046038.01.T01 MTR_4g055803 39.091 110 61 2 91 194 124 233 1.13e-14 72.0
MsG0880046038.01.T01 MTR_7g116320 40.580 69 41 0 92 160 143 211 1.39e-14 71.2
MsG0880046038.01.T01 MTR_4g055813 40.566 106 61 2 91 194 18 123 1.42e-14 70.5
MsG0880046038.01.T01 MTR_7g116320 40.580 69 41 0 92 160 143 211 2.91e-14 69.7
MsG0880046038.01.T01 MTR_4g055833 38.182 110 62 2 91 194 121 230 3.50e-13 67.4
MsG0880046038.01.T01 MTR_1g073870 39.669 121 26 4 65 185 52 125 4.39e-13 65.9
MsG0880046038.01.T01 MTR_8g078930 36.697 109 59 3 96 195 5 112 2.33e-12 62.4
MsG0880046038.01.T01 MTR_5g011680 33.824 136 76 4 72 194 117 251 6.31e-12 63.2
MsG0880046038.01.T01 MTR_1g071850 38.462 104 58 3 73 173 38 138 1.33e-11 61.2
MsG0880046038.01.T01 MTR_5g011610 33.636 110 71 1 84 193 50 157 2.64e-11 61.6
MsG0880046038.01.T01 MTR_5g011620 33.654 104 67 1 91 194 114 215 3.44e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046038.01.T01 AT2G35270 87.970 133 16 0 63 195 76 208 2.68e-69 213
MsG0880046038.01.T01 AT4G17800 68.932 206 40 4 4 195 17 212 1.03e-63 199
MsG0880046038.01.T01 AT3G60870 54.545 187 62 4 13 194 18 186 4.94e-55 176
MsG0880046038.01.T01 AT1G76500 58.896 163 58 1 42 195 49 211 4.21e-53 172
MsG0880046038.01.T01 AT4G14465 54.037 161 68 2 16 176 24 178 1.05e-52 170
MsG0880046038.01.T01 AT2G42940 66.165 133 45 0 63 195 51 183 4.71e-52 168
MsG0880046038.01.T01 AT3G04570 66.906 139 38 1 65 195 80 218 4.85e-49 162
MsG0880046038.01.T01 AT5G49700 55.000 140 56 2 63 195 54 193 3.12e-48 159
MsG0880046038.01.T01 AT2G45430 74.453 137 31 1 63 195 87 223 4.07e-48 159
MsG0880046038.01.T01 AT4G12050 68.696 115 35 1 63 176 116 230 4.79e-46 155
MsG0880046038.01.T01 AT4G22810 71.324 136 36 1 63 195 103 238 1.09e-45 153
MsG0880046038.01.T01 AT4G35390 56.853 197 77 2 1 195 5 195 1.14e-45 153
MsG0880046038.01.T01 AT1G20900 50.000 180 50 2 6 176 58 206 4.06e-40 139
MsG0880046038.01.T01 AT3G55560 64.567 127 44 1 70 195 93 219 6.43e-37 130
MsG0880046038.01.T01 AT1G14490 48.905 137 61 3 66 195 6 140 1.28e-31 114
MsG0880046038.01.T01 AT1G14490 48.905 137 61 3 66 195 25 159 1.72e-31 114
MsG0880046038.01.T01 AT1G63470 39.568 139 71 5 65 194 147 281 4.88e-21 89.7
MsG0880046038.01.T01 AT5G62260 44.954 109 53 2 92 195 160 266 6.08e-21 88.2
MsG0880046038.01.T01 AT5G62260 44.954 109 53 2 92 195 160 266 6.92e-21 89.4
MsG0880046038.01.T01 AT5G62260 44.954 109 53 2 92 195 160 266 6.92e-21 89.4
MsG0880046038.01.T01 AT4G12080 43.810 105 52 2 95 194 173 275 2.21e-20 87.4
MsG0880046038.01.T01 AT4G17950 39.865 148 82 3 54 196 185 330 3.13e-20 87.8
MsG0880046038.01.T01 AT2G33620 42.537 134 73 3 64 194 136 268 3.39e-20 87.0
MsG0880046038.01.T01 AT2G33620 42.537 134 73 3 64 194 136 268 3.39e-20 87.0
MsG0880046038.01.T01 AT2G33620 42.537 134 73 3 64 194 136 268 3.39e-20 87.0
MsG0880046038.01.T01 AT2G33620 42.537 134 73 3 64 194 136 268 3.39e-20 87.0
MsG0880046038.01.T01 AT5G51590 40.909 110 58 2 91 195 177 284 7.34e-20 86.7
MsG0880046038.01.T01 AT3G04590 37.615 109 68 0 87 195 166 274 2.08e-19 85.1
MsG0880046038.01.T01 AT3G04590 40.594 101 60 0 95 195 174 274 2.67e-19 84.0
MsG0880046038.01.T01 AT2G45850 36.957 138 77 3 65 194 132 267 5.56e-19 83.6
MsG0880046038.01.T01 AT2G45850 36.957 138 77 3 65 194 132 267 5.56e-19 83.6
MsG0880046038.01.T01 AT4G25320 41.509 106 55 2 95 195 169 272 6.50e-19 84.0
MsG0880046038.01.T01 AT2G45850 36.957 138 77 3 65 194 132 267 8.12e-19 82.4
MsG0880046038.01.T01 AT5G46640 42.708 96 53 1 65 160 155 248 7.73e-16 75.1
MsG0880046038.01.T01 AT4G00200 45.455 66 36 0 95 160 126 191 7.82e-16 74.7
MsG0880046038.01.T01 AT4G00200 45.455 66 36 0 95 160 126 191 7.82e-16 74.7
MsG0880046038.01.T01 AT3G61310 36.957 138 81 2 65 196 134 271 2.29e-15 73.6
MsG0880046038.01.T01 AT4G22770 43.243 74 42 0 88 161 146 219 2.88e-15 73.2
MsG0880046038.01.T01 AT4G22770 43.243 74 42 0 88 161 146 219 2.88e-15 73.2
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 130 228 2.69e-13 67.8
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 130 228 2.69e-13 67.8
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 124 222 2.73e-13 67.8
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 124 222 2.73e-13 67.8
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 124 222 2.73e-13 67.8
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 124 222 2.73e-13 67.8
MsG0880046038.01.T01 AT1G63480 32.673 101 61 2 65 160 124 222 2.73e-13 67.8

Find 67 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAGAATCGTGCTGGTTT+TGG 0.296798 8:-68139808 None:intergenic
CGCAGCCAAGGTTTGGAGCT+TGG 0.329216 8:+68139896 MsG0880046038.01.T01:CDS
TTTGAGATATTGTCCTTGTC+TGG 0.371554 8:+68140205 MsG0880046038.01.T01:CDS
CACCAGCCGCCGCTGGTTGC+CGG 0.375766 8:-68140159 None:intergenic
GGTGATGGTGTTGTTGTTGA+AGG 0.376453 8:-68139787 None:intergenic
AGCTTAACGATTTATCTTGC+TGG 0.384930 8:+68140265 MsG0880046038.01.T01:CDS
AGTGATGATCACCGGTGGTT+TGG 0.402875 8:-68139990 None:intergenic
AGATGATCGCAGCCAAGGTT+TGG 0.404818 8:+68139889 MsG0880046038.01.T01:CDS
TTGGAGCTTGGTTCAGCAGC+CGG 0.422838 8:+68139908 MsG0880046038.01.T01:CDS
CTTGTTCTTCAGAATCGTGC+TGG 0.433912 8:-68139814 None:intergenic
CCGTCCACGCGGCAGACCAC+CGG 0.439648 8:+68139952 MsG0880046038.01.T01:CDS
CTGCCACCACCAGCTCCTCC+CGG 0.457572 8:+68140235 MsG0880046038.01.T01:CDS
CTAGTTGCTCCGGGAGGAGC+TGG 0.461233 8:-68140244 None:intergenic
GCCTACCACGTCTCCTGGTC+CGG 0.473561 8:-68139927 None:intergenic
CTTGGTTCAGCAGCCGGACC+AGG 0.477069 8:+68139914 MsG0880046038.01.T01:CDS
AATCGTTAAGCTAGTTGCTC+CGG 0.477146 8:-68140254 None:intergenic
CCGGTGGTCTGCCGCGTGGA+CGG 0.481538 8:-68139952 None:intergenic
ATCCGGCAACCAGCGGCGGC+TGG 0.482044 8:+68140157 MsG0880046038.01.T01:CDS
ATCTGTGTTCTTAGCGGCAG+TGG 0.498629 8:+68140115 MsG0880046038.01.T01:CDS
GCTCCGGGAGGAGCTGGTGG+TGG 0.501296 8:-68140238 None:intergenic
CTGTGACAAATGTCAGTATC+CGG 0.502662 8:+68140140 MsG0880046038.01.T01:CDS
CGGCGGCCTACCACGTCTCC+TGG 0.502985 8:-68139932 None:intergenic
CGGCAACCAGCGGCGGCTGG+TGG 0.511641 8:+68140160 MsG0880046038.01.T01:CDS
GTTGGTGAGCTTATCGCAGC+GGG 0.514914 8:+68140319 MsG0880046038.01.T01:CDS
GGTGGTGTTGTTACGCTACA+TGG 0.516870 8:+68140178 MsG0880046038.01.T01:CDS
GTGGTGGGAGGTAGCGTGGT+TGG 0.517362 8:+68140301 MsG0880046038.01.T01:CDS
CGGTGCACCACCACCAACAC+TGG 0.523693 8:-68139849 None:intergenic
ATTTATCTTGCTGGAGGACA+AGG 0.523860 8:+68140274 MsG0880046038.01.T01:CDS
CGTGGGATCTGTGTTCTTAG+CGG 0.526507 8:+68140109 MsG0880046038.01.T01:CDS
CTGAACCAAGCTCCAAACCT+TGG 0.527609 8:-68139901 None:intergenic
TTCAAGAATATGAGCTCTGA+GGG 0.530656 8:-68140029 None:intergenic
TGGAGGACAAGGACAGGTGG+TGG 0.534409 8:+68140285 MsG0880046038.01.T01:CDS
CTCTCTCGAGTGATGATCAC+CGG 0.539638 8:-68139998 None:intergenic
ATCGTTAAGCTAGTTGCTCC+GGG 0.547154 8:-68140253 None:intergenic
GGAGGACAAGGACAGGTGGT+GGG 0.551835 8:+68140286 MsG0880046038.01.T01:CDS
ACAACACCACCAGCCGCCGC+TGG 0.553782 8:-68140166 None:intergenic
GTGGTCTGCCGCGTGGACGG+CGG 0.559279 8:-68139949 None:intergenic
GTTGCTCCGGGAGGAGCTGG+TGG 0.563676 8:-68140241 None:intergenic
GAATCAAATCGTGCCAGTGT+TGG 0.565155 8:+68139836 MsG0880046038.01.T01:CDS
ACGTTGACGACGGCGAGCAT+AGG 0.566838 8:-68140089 None:intergenic
CGTCCACGCGGCAGACCACC+GGG 0.573105 8:+68139953 MsG0880046038.01.T01:CDS
TCTTGCTGGAGGACAAGGAC+AGG 0.576199 8:+68140279 MsG0880046038.01.T01:CDS
TCTTCTTCGTTCGATGAGAA+CGG 0.581747 8:-68139869 None:intergenic
GCTTTATGCAAAACATCCAC+AGG 0.581801 8:+68139753 None:intergenic
TCAAATCGTGCCAGTGTTGG+TGG 0.581951 8:+68139839 MsG0880046038.01.T01:CDS
ACAGGTGGTGGGAGGTAGCG+TGG 0.584119 8:+68140297 MsG0880046038.01.T01:CDS
GAAGAAGATGATCGCAGCCA+AGG 0.594535 8:+68139884 MsG0880046038.01.T01:CDS
TTAACGATTTATCTTGCTGG+AGG 0.597516 8:+68140268 MsG0880046038.01.T01:CDS
TTGACGACGGCGAGCATAGG+TGG 0.600696 8:-68140086 None:intergenic
CAGTATCCGGCAACCAGCGG+CGG 0.607370 8:+68140153 MsG0880046038.01.T01:CDS
CATATTCTTGAAGTTGCCAG+TGG 0.608398 8:+68140040 MsG0880046038.01.T01:CDS
AATCGTGCCAGTGTTGGTGG+TGG 0.611425 8:+68139842 MsG0880046038.01.T01:CDS
TATGCTCGCCGTCGTCAACG+TGG 0.615533 8:+68140091 MsG0880046038.01.T01:CDS
CACAGATCCCACGTTGACGA+CGG 0.619869 8:-68140099 None:intergenic
AGCAGCCGGACCAGGAGACG+TGG 0.625149 8:+68139922 MsG0880046038.01.T01:CDS
GGACAAGGACAGGTGGTGGG+AGG 0.626108 8:+68140289 MsG0880046038.01.T01:CDS
ATGCTCGCCGTCGTCAACGT+GGG 0.633340 8:+68140092 MsG0880046038.01.T01:CDS
TGTCAGTATCCGGCAACCAG+CGG 0.635215 8:+68140150 MsG0880046038.01.T01:CDS
TGCTGGAGGACAAGGACAGG+TGG 0.640269 8:+68140282 MsG0880046038.01.T01:CDS
CTTCAAGAATATGAGCTCTG+AGG 0.644966 8:-68140030 None:intergenic
GTGGTAGGCCGCCGTCCACG+CGG 0.646690 8:+68139941 MsG0880046038.01.T01:CDS
TCTCGAGTGATGATCACCGG+TGG 0.659633 8:-68139995 None:intergenic
GGTTGGTGAGCTTATCGCAG+CGG 0.666493 8:+68140318 MsG0880046038.01.T01:CDS
GCCGGACCAGGAGACGTGGT+AGG 0.693052 8:+68139926 MsG0880046038.01.T01:CDS
GATCCCGGTGGTCTGCCGCG+TGG 0.697134 8:-68139956 None:intergenic
TGGCAGAAAAGATCCAGACA+AGG 0.722466 8:-68140218 None:intergenic
GTTAAGCTAGTTGCTCCGGG+AGG 0.738557 8:-68140250 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AGCTTAACGATTTATCTTGC+TGG + Chr8:68140265-68140284 MsG0880046038.01.T01:CDS 35.0%
TTAACGATTTATCTTGCTGG+AGG + Chr8:68140268-68140287 MsG0880046038.01.T01:CDS 35.0%
TTCAAAAACATCAGAACCAC+TGG - Chr8:68140059-68140078 None:intergenic 35.0%
! TTCAAGAATATGAGCTCTGA+GGG - Chr8:68140032-68140051 None:intergenic 35.0%
! TTTGAGATATTGTCCTTGTC+TGG + Chr8:68140205-68140224 MsG0880046038.01.T01:CDS 35.0%
AATCGTTAAGCTAGTTGCTC+CGG - Chr8:68140257-68140276 None:intergenic 40.0%
ATTTATCTTGCTGGAGGACA+AGG + Chr8:68140274-68140293 MsG0880046038.01.T01:CDS 40.0%
CATATTCTTGAAGTTGCCAG+TGG + Chr8:68140040-68140059 MsG0880046038.01.T01:CDS 40.0%
CTGTGACAAATGTCAGTATC+CGG + Chr8:68140140-68140159 MsG0880046038.01.T01:CDS 40.0%
CTTCAAGAATATGAGCTCTG+AGG - Chr8:68140033-68140052 None:intergenic 40.0%
GAAAAACAAAGCCAAACCAC+CGG + Chr8:68139979-68139998 MsG0880046038.01.T01:CDS 40.0%
TCTTCTTCGTTCGATGAGAA+CGG - Chr8:68139872-68139891 None:intergenic 40.0%
!!! TTGGCTTTGTTTTTCGATCC+CGG - Chr8:68139974-68139993 None:intergenic 40.0%
ATCGTTAAGCTAGTTGCTCC+GGG - Chr8:68140256-68140275 None:intergenic 45.0%
CTTGTTCTTCAGAATCGTGC+TGG - Chr8:68139817-68139836 None:intergenic 45.0%
GAATCAAATCGTGCCAGTGT+TGG + Chr8:68139836-68139855 MsG0880046038.01.T01:CDS 45.0%
TGGCAGAAAAGATCCAGACA+AGG - Chr8:68140221-68140240 None:intergenic 45.0%
!! GAAGGTGTAAGTTTTGCCTG+TGG - Chr8:68139772-68139791 None:intergenic 45.0%
!! GGTGATGGTGTTGTTGTTGA+AGG - Chr8:68139790-68139809 None:intergenic 45.0%
!!! AATCGTGCTGGTTTTGGTGA+TGG - Chr8:68139805-68139824 None:intergenic 45.0%
!!! CTTCAGAATCGTGCTGGTTT+TGG - Chr8:68139811-68139830 None:intergenic 45.0%
AGATGATCGCAGCCAAGGTT+TGG + Chr8:68139889-68139908 MsG0880046038.01.T01:CDS 50.0%
AGTGATGATCACCGGTGGTT+TGG - Chr8:68139993-68140012 None:intergenic 50.0%
ATCTGTGTTCTTAGCGGCAG+TGG + Chr8:68140115-68140134 MsG0880046038.01.T01:CDS 50.0%
CGTGGGATCTGTGTTCTTAG+CGG + Chr8:68140109-68140128 MsG0880046038.01.T01:CDS 50.0%
CTCTCTCGAGTGATGATCAC+CGG - Chr8:68140001-68140020 None:intergenic 50.0%
CTGAACCAAGCTCCAAACCT+TGG - Chr8:68139904-68139923 None:intergenic 50.0%
GAAGAAGATGATCGCAGCCA+AGG + Chr8:68139884-68139903 MsG0880046038.01.T01:CDS 50.0%
! TCAAATCGTGCCAGTGTTGG+TGG + Chr8:68139839-68139858 MsG0880046038.01.T01:CDS 50.0%
!! GGTGGTGTTGTTACGCTACA+TGG + Chr8:68140178-68140197 MsG0880046038.01.T01:CDS 50.0%
!!! GCTTTGTTTTTCGATCCCGG+TGG - Chr8:68139971-68139990 None:intergenic 50.0%
CACAGATCCCACGTTGACGA+CGG - Chr8:68140102-68140121 None:intergenic 55.0%
GTTAAGCTAGTTGCTCCGGG+AGG - Chr8:68140253-68140272 None:intergenic 55.0%
TCTCGAGTGATGATCACCGG+TGG - Chr8:68139998-68140017 None:intergenic 55.0%
TCTTGCTGGAGGACAAGGAC+AGG + Chr8:68140279-68140298 MsG0880046038.01.T01:CDS 55.0%
TGTCAGTATCCGGCAACCAG+CGG + Chr8:68140150-68140169 MsG0880046038.01.T01:CDS 55.0%
TTGGAGCTTGGTTCAGCAGC+CGG + Chr8:68139908-68139927 MsG0880046038.01.T01:CDS 55.0%
! GTTGGTGAGCTTATCGCAGC+GGG + Chr8:68140319-68140338 MsG0880046038.01.T01:CDS 55.0%
!! AATCGTGCCAGTGTTGGTGG+TGG + Chr8:68139842-68139861 MsG0880046038.01.T01:CDS 55.0%
!! GGTTGGTGAGCTTATCGCAG+CGG + Chr8:68140318-68140337 MsG0880046038.01.T01:CDS 55.0%
ACGTTGACGACGGCGAGCAT+AGG - Chr8:68140092-68140111 None:intergenic 60.0%
ATGCTCGCCGTCGTCAACGT+GGG + Chr8:68140092-68140111 MsG0880046038.01.T01:CDS 60.0%
GGAGGACAAGGACAGGTGGT+GGG + Chr8:68140286-68140305 MsG0880046038.01.T01:CDS 60.0%
TATGCTCGCCGTCGTCAACG+TGG + Chr8:68140091-68140110 MsG0880046038.01.T01:CDS 60.0%
TGCTGGAGGACAAGGACAGG+TGG + Chr8:68140282-68140301 MsG0880046038.01.T01:CDS 60.0%
TGGAGGACAAGGACAGGTGG+TGG + Chr8:68140285-68140304 MsG0880046038.01.T01:CDS 60.0%
TTGACGACGGCGAGCATAGG+TGG - Chr8:68140089-68140108 None:intergenic 60.0%
! CGCAGCCAAGGTTTGGAGCT+TGG + Chr8:68139896-68139915 MsG0880046038.01.T01:CDS 60.0%
CAGTATCCGGCAACCAGCGG+CGG + Chr8:68140153-68140172 MsG0880046038.01.T01:CDS 65.0%
CGGTGCACCACCACCAACAC+TGG - Chr8:68139852-68139871 None:intergenic 65.0%
CTAGTTGCTCCGGGAGGAGC+TGG - Chr8:68140247-68140266 None:intergenic 65.0%
CTTGGTTCAGCAGCCGGACC+AGG + Chr8:68139914-68139933 MsG0880046038.01.T01:CDS 65.0%
GCCTACCACGTCTCCTGGTC+CGG - Chr8:68139930-68139949 None:intergenic 65.0%
! GTGGTGGGAGGTAGCGTGGT+TGG + Chr8:68140301-68140320 MsG0880046038.01.T01:CDS 65.0%
!! ACAGGTGGTGGGAGGTAGCG+TGG + Chr8:68140297-68140316 MsG0880046038.01.T01:CDS 65.0%
!! GGACAAGGACAGGTGGTGGG+AGG + Chr8:68140289-68140308 MsG0880046038.01.T01:CDS 65.0%
ACAACACCACCAGCCGCCGC+TGG - Chr8:68140169-68140188 None:intergenic 70.0%
AGCAGCCGGACCAGGAGACG+TGG + Chr8:68139922-68139941 MsG0880046038.01.T01:CDS 70.0%
CTGCCACCACCAGCTCCTCC+CGG + Chr8:68140235-68140254 MsG0880046038.01.T01:CDS 70.0%
GCCGGACCAGGAGACGTGGT+AGG + Chr8:68139926-68139945 MsG0880046038.01.T01:CDS 70.0%
GTTGCTCCGGGAGGAGCTGG+TGG - Chr8:68140244-68140263 None:intergenic 70.0%
ATCCGGCAACCAGCGGCGGC+TGG + Chr8:68140157-68140176 MsG0880046038.01.T01:CDS 75.0%
CCGGTGGTCTGCCGCGTGGA+CGG - Chr8:68139955-68139974 None:intergenic 75.0%
CCGTCCACGCGGCAGACCAC+CGG + Chr8:68139952-68139971 MsG0880046038.01.T01:CDS 75.0%
CGGCGGCCTACCACGTCTCC+TGG - Chr8:68139935-68139954 None:intergenic 75.0%
CGTCCACGCGGCAGACCACC+GGG + Chr8:68139953-68139972 MsG0880046038.01.T01:CDS 75.0%
GATCCCGGTGGTCTGCCGCG+TGG - Chr8:68139959-68139978 None:intergenic 75.0%
GCTCCGGGAGGAGCTGGTGG+TGG - Chr8:68140241-68140260 None:intergenic 75.0%
GTGGTAGGCCGCCGTCCACG+CGG + Chr8:68139941-68139960 MsG0880046038.01.T01:CDS 75.0%
GTGGTCTGCCGCGTGGACGG+CGG - Chr8:68139952-68139971 None:intergenic 75.0%
! CACCAGCCGCCGCTGGTTGC+CGG - Chr8:68140162-68140181 None:intergenic 75.0%
! CGGCAACCAGCGGCGGCTGG+TGG + Chr8:68140160-68140179 MsG0880046038.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 68139758 68140348 68139758 ID=MsG0880046038.01;Name=MsG0880046038.01
Chr8 mRNA 68139758 68140348 68139758 ID=MsG0880046038.01.T01;Parent=MsG0880046038.01;Name=MsG0880046038.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|196
Chr8 exon 68139758 68140348 68139758 ID=MsG0880046038.01.T01:exon:16777;Parent=MsG0880046038.01.T01
Chr8 CDS 68139758 68140348 68139758 ID=MsG0880046038.01.T01:cds;Parent=MsG0880046038.01.T01
Gene Sequence

>MsG0880046038.01.T01

ATGCAAAACATCCACAGGCAAAACTTACACCTTCAACAACAACACCATCACCAAAACCAGCACGATTCTGAAGAACAAGAATCAAATCGTGCCAGTGTTGGTGGTGGTGCACCGTTCTCATCGAACGAAGAAGATGATCGCAGCCAAGGTTTGGAGCTTGGTTCAGCAGCCGGACCAGGAGACGTGGTAGGCCGCCGTCCACGCGGCAGACCACCGGGATCGAAAAACAAAGCCAAACCACCGGTGATCATCACTCGAGAGAGCGCAAACACCCTCAGAGCTCATATTCTTGAAGTTGCCAGTGGTTCTGATGTTTTTGAATGCGTATCCACCTATGCTCGCCGTCGTCAACGTGGGATCTGTGTTCTTAGCGGCAGTGGCACTGTGACAAATGTCAGTATCCGGCAACCAGCGGCGGCTGGTGGTGTTGTTACGCTACATGGAAGATTTGAGATATTGTCCTTGTCTGGATCTTTTCTGCCACCACCAGCTCCTCCCGGAGCAACTAGCTTAACGATTTATCTTGCTGGAGGACAAGGACAGGTGGTGGGAGGTAGCGTGGTTGGTGAGCTTATCGCAGCGGGCCAGTGA

Protein sequence

>MsG0880046038.01.T01

MQNIHRQNLHLQQQHHHQNQHDSEEQESNRASVGGGAPFSSNEEDDRSQGLELGSAAGPGDVVGRRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVASGSDVFECVSTYARRRQRGICVLSGSGTVTNVSIRQPAAAGGVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELIAAGQ*