AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006442.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006442.01.T01 MTR_2g008470 94.118 663 16 2 14 654 16 677 0.0 1245
MsG0280006442.01.T01 MTR_2g008470 94.234 659 15 2 18 654 1 658 0.0 1238
MsG0280006442.01.T01 MTR_5g061880 67.945 652 179 6 23 650 5 650 0.0 919
MsG0280006442.01.T01 MTR_3g073780 66.409 646 189 6 32 650 10 654 0.0 865
MsG0280006442.01.T01 MTR_3g073780 66.955 578 163 6 32 582 10 586 0.0 778
MsG0280006442.01.T01 MTR_3g073780 67.455 550 152 5 32 554 10 559 0.0 749
MsG0280006442.01.T01 MTR_2g102243 53.247 616 266 2 52 645 22 637 0.0 668
MsG0280006442.01.T01 MTR_7g095430 52.273 616 272 2 52 645 17 632 0.0 658
MsG0280006442.01.T01 MTR_4g011970 52.090 622 275 3 47 645 23 644 0.0 652
MsG0280006442.01.T01 MTR_4g084620 51.037 627 279 5 47 647 9 633 0.0 652
MsG0280006442.01.T01 MTR_1g071530 52.846 615 268 2 52 644 20 634 0.0 650
MsG0280006442.01.T01 MTR_4g084640 51.294 618 277 3 52 647 21 636 0.0 639
MsG0280006442.01.T01 MTR_5g061860 49.603 629 268 8 50 644 30 643 0.0 608
MsG0280006442.01.T01 MTR_2g102243 53.345 553 236 2 52 582 22 574 0.0 608
MsG0280006442.01.T01 MTR_7g095430 53.526 553 235 2 52 582 17 569 0.0 607
MsG0280006442.01.T01 MTR_3g073730 49.291 635 283 6 43 646 25 651 0.0 606
MsG0280006442.01.T01 MTR_3g087740 52.373 590 255 5 82 646 60 648 0.0 604
MsG0280006442.01.T01 MTR_6g086170 45.667 600 299 4 68 644 25 620 0.0 548
MsG0280006442.01.T01 MTR_5g061860 51.577 539 213 7 50 554 30 554 0.0 541
MsG0280006442.01.T01 MTR_3g087730 40.187 642 336 11 41 644 18 649 4.67e-153 457
MsG0280006442.01.T01 MTR_7g022870 38.527 584 331 7 83 644 56 633 5.24e-129 397
MsG0280006442.01.T01 MTR_7g022870 38.123 522 295 7 83 582 56 571 2.74e-110 344
MsG0280006442.01.T01 MTR_6g024420 74.157 89 12 1 276 364 89 166 7.89e-35 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006442.01.T01 AT1G22150 68.603 637 177 2 37 650 15 651 0.0 866
MsG0280006442.01.T01 AT1G22150 68.603 637 177 2 37 650 15 651 0.0 866
MsG0280006442.01.T01 AT1G22150 68.603 637 177 2 37 650 15 651 0.0 866
MsG0280006442.01.T01 AT4G08620 67.299 633 180 4 38 645 8 638 0.0 846
MsG0280006442.01.T01 AT1G78000 66.924 647 179 3 39 650 2 648 0.0 844
MsG0280006442.01.T01 AT1G78000 66.924 647 179 3 39 650 2 648 0.0 844
MsG0280006442.01.T01 AT1G78000 66.924 647 179 3 39 650 2 648 0.0 844
MsG0280006442.01.T01 AT1G78000 67.327 606 163 3 39 609 2 607 0.0 791
MsG0280006442.01.T01 AT1G22150 67.838 569 160 2 37 582 15 583 0.0 764
MsG0280006442.01.T01 AT1G78000 66.667 579 158 3 39 582 2 580 0.0 743
MsG0280006442.01.T01 AT3G51895 52.640 644 273 4 35 646 38 681 0.0 694
MsG0280006442.01.T01 AT3G51895 53.270 627 270 3 43 646 10 636 0.0 691
MsG0280006442.01.T01 AT3G15990 52.435 616 271 2 52 645 26 641 0.0 665
MsG0280006442.01.T01 AT1G23090 50.160 626 289 3 52 654 3 628 0.0 639
MsG0280006442.01.T01 AT4G02700 50.647 618 280 5 53 646 10 626 0.0 617
MsG0280006442.01.T01 AT1G78000 66.397 494 131 3 39 497 2 495 0.0 617
MsG0280006442.01.T01 AT5G10180 48.476 656 308 8 23 650 23 676 0.0 591
MsG0280006442.01.T01 AT1G77990 50.783 575 256 4 97 644 89 663 0.0 576
MsG0280006442.01.T01 AT1G78000 68.539 445 117 2 161 582 1 445 0.0 573
MsG0280006442.01.T01 AT5G19600 42.975 605 309 4 67 646 29 622 5.59e-176 515
MsG0280006442.01.T01 AT1G23090 49.597 496 227 3 182 654 1 496 2.50e-169 493
MsG0280006442.01.T01 AT1G23090 49.597 496 227 3 182 654 1 496 2.50e-169 493
MsG0280006442.01.T01 AT1G23090 49.597 496 227 3 182 654 1 496 2.50e-169 493
MsG0280006442.01.T01 AT5G13550 38.384 594 328 10 78 644 57 639 4.84e-123 380
MsG0280006442.01.T01 AT3G12520 38.007 592 333 9 78 644 28 610 6.10e-123 380
MsG0280006442.01.T01 AT3G12520 38.007 592 333 9 78 644 44 626 1.14e-122 379
MsG0280006442.01.T01 AT3G12520 38.677 499 277 7 78 554 44 535 6.79e-105 329

Find 140 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGGATTGGTTTGATTTC+TGG 0.134086 2:+1992579 MsG0280006442.01.T01:CDS
ATATGCAAAGCTTGCAAATT+TGG 0.169620 2:+1991323 MsG0280006442.01.T01:CDS
CCTCTTCCCCATTCCAAAAT+AGG 0.182734 2:-1991070 None:intergenic
TGTCACTTGTAAAAGAATTT+TGG 0.185418 2:-1993883 None:intergenic
CCAAGAAATAAAACAAATTA+AGG 0.186381 2:+1990537 None:intergenic
AAGAAAAGAAAGTTTGTTCT+TGG 0.220364 2:+1991031 MsG0280006442.01.T01:CDS
TGAAATTGTGTTTGAAATCT+TGG 0.241280 2:-1990958 None:intergenic
ATTAATTTATTAATAGATAA+TGG 0.248500 2:-1992528 None:intergenic
TCCTCTTGTGTATGCTTTCA+TGG 0.256797 2:+1991458 MsG0280006442.01.T01:CDS
CTATCTCATGCTGCCATTGT+TGG 0.257628 2:+1991749 MsG0280006442.01.T01:CDS
GCTTGCATGGGAGCCTTCTT+TGG 0.259292 2:+1993359 MsG0280006442.01.T01:CDS
TTCCCTAGTACTGCAGTCTT+TGG 0.269506 2:-1993909 None:intergenic
GCCTGGAATCTGTGCTGCTT+TGG 0.281443 2:-1993973 None:intergenic
TTTACTTCCACTTTCTTTGC+AGG 0.292205 2:+1991594 MsG0280006442.01.T01:CDS
AAAGCAAGAGCAAGGTATTC+AGG 0.293778 2:-1991573 None:intergenic
GGTGATGCTGTTGCATCTTT+TGG 0.297951 2:+1994816 MsG0280006442.01.T01:CDS
TTCAAGGGTGATTTGATTGC+TGG 0.309276 2:+1991109 MsG0280006442.01.T01:CDS
CTTTATCTGTTTACATTACA+AGG 0.311893 2:+1992373 MsG0280006442.01.T01:CDS
AGAAGAATAAGAAACTCTTT+TGG 0.315159 2:+1992310 MsG0280006442.01.T01:CDS
CAACAGCTTAAAGGTCTTCT+TGG 0.315645 2:+1991806 MsG0280006442.01.T01:CDS
ATTGCACTCCAACAGCTTAA+AGG 0.316243 2:+1991797 MsG0280006442.01.T01:CDS
TGCTGCCATTGTTGGATTCA+TGG 0.321367 2:+1991757 MsG0280006442.01.T01:CDS
AAGGGTGTGTGAAACTATTA+AGG 0.332868 2:+1994918 MsG0280006442.01.T01:three_prime_UTR
CGAAGTTATCGGACTTAATC+GGG 0.336899 2:+1994769 MsG0280006442.01.T01:CDS
CTCTTCCCCATTCCAAAATA+GGG 0.337970 2:-1991069 None:intergenic
TTCCAGGGACAACTGTTTAT+AGG 0.340007 2:+1993934 MsG0280006442.01.T01:CDS
TTCCAGGCATGTTGATTGTC+AGG 0.345296 2:+1993988 MsG0280006442.01.T01:CDS
CCTGGAATCTGTGCTGCTTT+GGG 0.346194 2:-1993972 None:intergenic
CTTTGTTTGGTCTTTAAACT+TGG 0.350630 2:-1991011 None:intergenic
CCTTGTAACATCACTTGGTT+TGG 0.351912 2:+1990571 MsG0280006442.01.T01:CDS
GCTCCATGCGTCGAAGTTAT+CGG 0.363371 2:+1994758 MsG0280006442.01.T01:CDS
GATTAAATACACACTTCAAT+TGG 0.364756 2:-1994883 None:intergenic
GCAGTACTAGGGAAGCTTCC+AGG 0.366219 2:+1993918 MsG0280006442.01.T01:CDS
CTTCATAAATCTAACCCCTT+TGG 0.368134 2:-1994840 None:intergenic
ATTGAGGCAAGCACTGCATT+TGG 0.369886 2:-1993257 None:intergenic
TCGAAGTTATCGGACTTAAT+CGG 0.386214 2:+1994768 MsG0280006442.01.T01:CDS
TTATAGGAAGCTGTGGCTAT+TGG 0.387887 2:+1992701 MsG0280006442.01.T01:intron
CCCAAAGCAGCACAGATTCC+AGG 0.396337 2:+1993972 MsG0280006442.01.T01:CDS
TGGTCTTTAAACTTGGCAAA+AGG 0.400457 2:-1991004 None:intergenic
CAACAATGGCAGCATGAGAT+AGG 0.409845 2:-1991748 None:intergenic
AGGCCAAAGACTGCAGTACT+AGG 0.416363 2:+1993906 MsG0280006442.01.T01:CDS
TTTAATCAAATATAAAGAAA+AGG 0.417077 2:+1994899 MsG0280006442.01.T01:three_prime_UTR
AACTATTAAGGAAAGCTCTT+AGG 0.419754 2:+1994930 MsG0280006442.01.T01:three_prime_UTR
TGACTGATGAAGAGATTCTA+AGG 0.420497 2:+1994157 MsG0280006442.01.T01:CDS
TCGCTCAGCTGTGAACTATA+TGG 0.425561 2:+1993145 MsG0280006442.01.T01:CDS
TGACTATACATCACATCATC+TGG 0.425936 2:-1995016 None:intergenic
CAGAGTTAACAGCAAGACTA+TGG 0.428342 2:-1993204 None:intergenic
ATGAAAGACTATTCACTAGA+TGG 0.435225 2:+1992740 MsG0280006442.01.T01:CDS
TTACAATCTTAAAAGTTTCA+AGG 0.444890 2:+1991093 MsG0280006442.01.T01:CDS
CCAAAATAGGGAAAACAGAT+TGG 0.445171 2:-1991057 None:intergenic
GATTGGTTTGATTTCTGGTA+TGG 0.445380 2:+1992584 MsG0280006442.01.T01:CDS
CTTTGCAGGAGTCGTTCAAA+TGG 0.446527 2:+1991608 MsG0280006442.01.T01:CDS
TTCTCAATTACAATTGGTCC+CGG 0.448652 2:-1994735 None:intergenic
TGCAAGTCTTTGCATTCCTC+AGG 0.450670 2:+1991141 MsG0280006442.01.T01:CDS
GTCAATCTTCCACAGAAGAA+TGG 0.453847 2:-1993321 None:intergenic
TGGAGCTTCTCAATTACAAT+TGG 0.454327 2:-1994741 None:intergenic
TGATGTGATGTATAGTCATA+AGG 0.456164 2:+1995021 MsG0280006442.01.T01:three_prime_UTR
ATACCTGTCCTTGATGTAGT+TGG 0.466743 2:-1994039 None:intergenic
TTAATCAAATATAAAGAAAA+GGG 0.467671 2:+1994900 MsG0280006442.01.T01:three_prime_UTR
CAAGAAGACCTTTAAGCTGT+TGG 0.469899 2:-1991805 None:intergenic
CCTCAAGAAAAGAGATATCC+AGG 0.470474 2:+1994373 MsG0280006442.01.T01:CDS
TGCTGTATCAAACATAGTTA+TGG 0.470482 2:+1993181 MsG0280006442.01.T01:CDS
CACCACAGCTACTGGTCCTA+TGG 0.471439 2:-1991499 None:intergenic
TGGCTGCTTCATAGTCGATC+AGG 0.473139 2:-1993301 None:intergenic
GCTGCCATTGTTGGATTCAT+GGG 0.479140 2:+1991758 MsG0280006442.01.T01:CDS
GGTCTTTAAACTTGGCAAAA+GGG 0.479341 2:-1991003 None:intergenic
AAGAGAGACACCACAGCTAC+TGG 0.485168 2:-1991507 None:intergenic
TAAGTAAATCTTCAAAGGAA+TGG 0.486181 2:-1994346 None:intergenic
CAAGAAATAAAACAAATTAA+GGG 0.487507 2:+1990538 None:intergenic
TCTTGGAAAAGTGTCTGCTT+AGG 0.491359 2:-1990941 None:intergenic
TACAATCTTAAAAGTTTCAA+GGG 0.492892 2:+1991094 MsG0280006442.01.T01:CDS
TGGAAAAGTGTCTGCTTAGG+AGG 0.498429 2:-1990938 None:intergenic
GCTGTGGTGTCTCTCTTGCT+TGG 0.500101 2:+1991513 MsG0280006442.01.T01:CDS
CCTCTTGTGTATGCTTTCAT+GGG 0.500665 2:+1991459 MsG0280006442.01.T01:CDS
ACTAGATGGTAACAGAGAAA+TGG 0.501787 2:+1992754 MsG0280006442.01.T01:CDS
TTTAGTGCTGCAATTCGGAT+TGG 0.504546 2:+1992567 MsG0280006442.01.T01:CDS
GTGCTGCTTTGGGATATTGA+AGG 0.505499 2:-1993962 None:intergenic
ACATCTTGCTATGTGGCTAC+AGG 0.505528 2:+1992812 MsG0280006442.01.T01:CDS
ACAGCTTCTCTTGGCAAACC+CGG 0.505593 2:+1994716 MsG0280006442.01.T01:intron
TTCTTTGACATCTTGCTATG+TGG 0.506110 2:+1992805 MsG0280006442.01.T01:CDS
AACGACTCCTGCAAAGAAAG+TGG 0.508239 2:-1991601 None:intergenic
ACCCTGACAATCAACATGCC+TGG 0.509783 2:-1993990 None:intergenic
TTTGAAGATGACACCAAAGA+AGG 0.514127 2:-1993372 None:intergenic
GACACTATAACACAAATCAT+AGG 0.515269 2:-1992348 None:intergenic
TCTTTCCTTGTAACATCACT+TGG 0.516094 2:+1990566 MsG0280006442.01.T01:CDS
CTAGGAACAATGAACGTTGT+TGG 0.520186 2:+1992782 MsG0280006442.01.T01:CDS
GATGTGATGTATAGTCATAA+GGG 0.526424 2:+1995022 MsG0280006442.01.T01:three_prime_UTR
CCAAACCAAGTGATGTTACA+AGG 0.527269 2:-1990571 None:intergenic
TTCTGGTATGGTAGCACTCA+CGG 0.530286 2:+1992596 MsG0280006442.01.T01:CDS
ACAATGAGATGCTGTATGCT+TGG 0.530319 2:-1994195 None:intergenic
TAGTGATGAGGCTGTGTCAA+GGG 0.531117 2:+1990832 MsG0280006442.01.T01:CDS
CAGTACTAGGGAAGCTTCCA+GGG 0.534123 2:+1993919 MsG0280006442.01.T01:CDS
TTCCTATAAACAGTTGTCCC+TGG 0.534409 2:-1993936 None:intergenic
TTTGGAGTGTACTTGAATAG+TGG 0.535429 2:-1993239 None:intergenic
ATCTTCAAAAGTGTCGAAGT+TGG 0.537832 2:+1993386 MsG0280006442.01.T01:CDS
GCACCATGTCTACGTGAAGA+AGG 0.538007 2:-1990878 None:intergenic
AAAGCTCTTAGGAACAATGA+AGG 0.540739 2:+1994941 MsG0280006442.01.T01:three_prime_UTR
TGAGGCTGTGTCAAGGGCCA+TGG 0.540864 2:+1990838 MsG0280006442.01.T01:CDS
CACCGCAGCTATAATAATTG+AGG 0.542930 2:-1993273 None:intergenic
AAGCTCTTAGGAACAATGAA+GGG 0.543242 2:+1994942 MsG0280006442.01.T01:three_prime_UTR
GCTCTTAAGTAAATCTTCAA+AGG 0.545749 2:-1994351 None:intergenic
TCCAGGCATGTTGATTGTCA+GGG 0.554226 2:+1993989 MsG0280006442.01.T01:CDS
CTTGACACTTTGTGCATGAG+TGG 0.557130 2:-1990914 None:intergenic
CAGCTTCTCTTGGCAAACCC+GGG 0.557325 2:+1994717 MsG0280006442.01.T01:intron
GCTTGGAAGTCTGCTTTCAG+AGG 0.558212 2:+1991530 MsG0280006442.01.T01:CDS
CGAAGTTGGCCTTATGATTG+CGG 0.559487 2:+1993400 MsG0280006442.01.T01:CDS
CTCAAACTCCAACTACATCA+AGG 0.564677 2:+1994031 MsG0280006442.01.T01:CDS
CAGGTGAGACATATTGAGAA+GGG 0.565903 2:+1992498 MsG0280006442.01.T01:intron
CTGTTGGAGTGCAATAGTAA+TGG 0.567894 2:-1991789 None:intergenic
TTAGTGATGAGGCTGTGTCA+AGG 0.569946 2:+1990831 MsG0280006442.01.T01:CDS
GATAAAATATTTCTAACAGT+AGG 0.570754 2:+1994795 MsG0280006442.01.T01:CDS
TATTGTTTCTGTCATGACAT+CGG 0.579730 2:+1991856 MsG0280006442.01.T01:CDS
TGCCTCAATTATTATAGCTG+CGG 0.579936 2:+1993271 MsG0280006442.01.T01:CDS
GGCCAAAGACTGCAGTACTA+GGG 0.584729 2:+1993907 MsG0280006442.01.T01:CDS
GCCATTGTTGGATTCATGGG+TGG 0.589161 2:+1991761 MsG0280006442.01.T01:CDS
TCAGCTGTGAACTATATGGC+TGG 0.589271 2:+1993149 MsG0280006442.01.T01:CDS
TGGAAGTAAAAGCAAGAGCA+AGG 0.591512 2:-1991581 None:intergenic
TCAGGTGAGACATATTGAGA+AGG 0.592196 2:+1992497 MsG0280006442.01.T01:intron
ACTCCAACTACATCAAGGAC+AGG 0.593615 2:+1994036 MsG0280006442.01.T01:CDS
TTTAACCTTATAGGAAGCTG+TGG 0.593761 2:+1992694 MsG0280006442.01.T01:intron
GGAGTCGTTCAAATGGCACT+TGG 0.596225 2:+1991615 MsG0280006442.01.T01:CDS
TTACATTACAAGGGCAGACA+AGG 0.600103 2:+1992383 MsG0280006442.01.T01:CDS
AACAGAGAAATGGTGGCACT+AGG 0.601028 2:+1992764 MsG0280006442.01.T01:CDS
AGTCCGATAACTTCGACGCA+TGG 0.601396 2:-1994761 None:intergenic
TAATTTACAGAATATTGAAG+TGG 0.603986 2:+1994133 MsG0280006442.01.T01:intron
TCTCAATTACAATTGGTCCC+GGG 0.605408 2:-1994734 None:intergenic
ATTACAAGGGCAGACAAGGA+TGG 0.605886 2:+1992387 MsG0280006442.01.T01:CDS
ATGAAGCAGCCATTCTTCTG+TGG 0.609299 2:+1993312 MsG0280006442.01.T01:CDS
AGTTCAAGAGATATTGCCAT+AGG 0.618983 2:+1991483 MsG0280006442.01.T01:CDS
CCCATGAAAGCATACACAAG+AGG 0.621389 2:-1991459 None:intergenic
TTTATCTGTTTACATTACAA+GGG 0.625365 2:+1992374 MsG0280006442.01.T01:CDS
TGCCATAGGACCAGTAGCTG+TGG 0.628926 2:+1991497 MsG0280006442.01.T01:CDS
AATCCTTCTTCACGTAGACA+TGG 0.636651 2:+1990875 MsG0280006442.01.T01:CDS
AGGAATGCAAAGACTTGCAA+TGG 0.639921 2:-1991137 None:intergenic
AGATGGTAACAGAGAAATGG+TGG 0.649874 2:+1992757 MsG0280006442.01.T01:CDS
AGCTCTTAGGAACAATGAAG+GGG 0.660527 2:+1994943 MsG0280006442.01.T01:three_prime_UTR
GTTACTGATATTGACACTAG+TGG 0.665183 2:+1994320 MsG0280006442.01.T01:CDS
TCCACCCATGAATCCAACAA+TGG 0.683614 2:-1991762 None:intergenic
TGCTTACATAGTGCATACTG+AGG 0.684096 2:-1991348 None:intergenic
GAAGTTATCGGACTTAATCG+GGG 0.702384 2:+1994770 MsG0280006442.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATCAAATATAAAGAAAA+GGG + Chr2:1994900-1994919 MsG0280006442.01.T01:three_prime_UTR 10.0%
!! TTTAATCAAATATAAAGAAA+AGG + Chr2:1994899-1994918 MsG0280006442.01.T01:three_prime_UTR 10.0%
!!! ATTAATAAATTAATTTTCAG+TGG + Chr2:1992537-1992556 MsG0280006442.01.T01:CDS 10.0%
!!! ATTAATCATCTTTTTTATTT+TGG + Chr2:1993004-1993023 MsG0280006442.01.T01:intron 10.0%
!!! CAATATATTTTGTTATAAAA+AGG - Chr2:1992190-1992209 None:intergenic 10.0%
!! ATAAATGTTTATGAAACAAA+AGG - Chr2:1992650-1992669 None:intergenic 15.0%
!! TAAATGTTTATGAAACAAAA+GGG - Chr2:1992649-1992668 None:intergenic 15.0%
!! TATTCTTTATCCAAATTAAA+CGG + Chr2:1990626-1990645 MsG0280006442.01.T01:intron 15.0%
!! TTTGATATCGTAAAAAATTA+TGG - Chr2:1993521-1993540 None:intergenic 15.0%
!!! ATATTGTTTTTTAACCTTAT+AGG + Chr2:1992685-1992704 MsG0280006442.01.T01:intron 15.0%
!! AACATAAGAATAGTCATAAA+AGG - Chr2:1992274-1992293 None:intergenic 20.0%
!! AATAAGTTAAAAACAGCTTA+TGG - Chr2:1992896-1992915 None:intergenic 20.0%
!! AATTATTGCTAATTAGTGTA+TGG + Chr2:1990776-1990795 MsG0280006442.01.T01:intron 20.0%
!! AATTTAAATAGATAACGTAG+TGG - Chr2:1991936-1991955 None:intergenic 20.0%
!! ATAAGAACTCTTCTTAAAAT+TGG + Chr2:1994428-1994447 MsG0280006442.01.T01:intron 20.0%
!! CAAAATAAATCATGAAAAAG+TGG - Chr2:1994259-1994278 None:intergenic 20.0%
!! TAATTGAATGAATTAAGCTA+TGG - Chr2:1994591-1994610 None:intergenic 20.0%
!! TAATTTACAGAATATTGAAG+TGG + Chr2:1994133-1994152 MsG0280006442.01.T01:intron 20.0%
!! TACAATCTTAAAAGTTTCAA+GGG + Chr2:1991094-1991113 MsG0280006442.01.T01:CDS 20.0%
!! TATAATAATATCATCAGAGA+TGG - Chr2:1994644-1994663 None:intergenic 20.0%
!! TCTTGTATAAAAACTAACTA+TGG + Chr2:1993653-1993672 MsG0280006442.01.T01:intron 20.0%
!! TTACAATCTTAAAAGTTTCA+AGG + Chr2:1991093-1991112 MsG0280006442.01.T01:CDS 20.0%
!! TTCTTAAAATTGGAAACAAA+TGG + Chr2:1994438-1994457 MsG0280006442.01.T01:intron 20.0%
!! TTTATCTGTTTACATTACAA+GGG + Chr2:1992374-1992393 MsG0280006442.01.T01:CDS 20.0%
!!! ATAAGCTATTTCTATAAGAA+AGG - Chr2:1992976-1992995 None:intergenic 20.0%
!!! GATAAAATATTTCTAACAGT+AGG + Chr2:1994795-1994814 MsG0280006442.01.T01:CDS 20.0%
!!! TGTTTCTGATTATTTTTTTC+AGG + Chr2:1993113-1993132 MsG0280006442.01.T01:intron 20.0%
! AAGATTTCAAAAGAAAGTGA+AGG - Chr2:1991910-1991929 None:intergenic 25.0%
! AATAATTGGACTATCATTCT+TGG + Chr2:1992160-1992179 MsG0280006442.01.T01:intron 25.0%
! AATTGGCAGACAATAATAAT+TGG + Chr2:1992146-1992165 MsG0280006442.01.T01:intron 25.0%
! ACCTTGATTTAAAAGAGAAA+TGG - Chr2:1993443-1993462 None:intergenic 25.0%
! ATATCAAATATCACGATCAA+TGG + Chr2:1993533-1993552 MsG0280006442.01.T01:intron 25.0%
! CTGAACTACATAATATATCA+AGG - Chr2:1991375-1991394 None:intergenic 25.0%
! CTTGCAAATACTTATACTAA+TGG - Chr2:1991968-1991987 None:intergenic 25.0%
! CTTTATCTGTTTACATTACA+AGG + Chr2:1992373-1992392 MsG0280006442.01.T01:CDS 25.0%
! GATTAAATACACACTTCAAT+TGG - Chr2:1994886-1994905 None:intergenic 25.0%
! GGTTAAGTAAATGTTAAACA+AGG - Chr2:1993831-1993850 None:intergenic 25.0%
! GTAAATGTGAATGCATAAAT+AGG + Chr2:1991293-1991312 MsG0280006442.01.T01:intron 25.0%
! TAAAGTTATAGGACCAAAAT+AGG - Chr2:1993037-1993056 None:intergenic 25.0%
! TAAGTAAATCTTCAAAGGAA+TGG - Chr2:1994349-1994368 None:intergenic 25.0%
! TAGTAAATGAAAATGAAGAG+AGG - Chr2:1992236-1992255 None:intergenic 25.0%
! TGGTTGTACATTTAATTGAA+TGG - Chr2:1994555-1994574 None:intergenic 25.0%
! TTCTTATGTTGCAATAAAAC+AGG + Chr2:1992284-1992303 MsG0280006442.01.T01:intron 25.0%
!! AAATTCTTTTACAAGTGACA+AGG + Chr2:1993886-1993905 MsG0280006442.01.T01:CDS 25.0%
!! AAGAAAAGAAAGTTTGTTCT+TGG + Chr2:1991031-1991050 MsG0280006442.01.T01:CDS 25.0%
!! ACCATTTCTCTTTTAAATCA+AGG + Chr2:1993439-1993458 MsG0280006442.01.T01:intron 25.0%
!! AGAAACAATATCAGTTTTCT+TGG - Chr2:1991846-1991865 None:intergenic 25.0%
!! AGAAGAATAAGAAACTCTTT+TGG + Chr2:1992310-1992329 MsG0280006442.01.T01:CDS 25.0%
!! CAAACTTTCTTTTCTTTGTT+TGG - Chr2:1991027-1991046 None:intergenic 25.0%
!! GAAGAATAAGAAACTCTTTT+GGG + Chr2:1992311-1992330 MsG0280006442.01.T01:CDS 25.0%
!! TGAAATTGTGTTTGAAATCT+TGG - Chr2:1990961-1990980 None:intergenic 25.0%
!!! AATATTTTAGTGCTGCAATT+CGG + Chr2:1992562-1992581 MsG0280006442.01.T01:CDS 25.0%
!!! ATTGCTTTTTATTTCTTCCA+TGG - Chr2:1990858-1990877 None:intergenic 25.0%
!!! TGTCACTTGTAAAAGAATTT+TGG - Chr2:1993886-1993905 None:intergenic 25.0%
!!! TTCTTTTTTCTTCATTTTGC+AGG + Chr2:1991705-1991724 MsG0280006442.01.T01:intron 25.0%
!!! TTTTGAAAATGTTAACTACC+TGG - Chr2:1994394-1994413 None:intergenic 25.0%
AAATGAAAATGAAGAGAGGA+AGG - Chr2:1992232-1992251 None:intergenic 30.0%
AACAGTAAATAAACCCTCTT+TGG - Chr2:1992840-1992859 None:intergenic 30.0%
AACTATTAAGGAAAGCTCTT+AGG + Chr2:1994930-1994949 MsG0280006442.01.T01:three_prime_UTR 30.0%
AATGAAAATGAAGAGAGGAA+GGG - Chr2:1992231-1992250 None:intergenic 30.0%
ACAGTAATAATCGTGAAACT+AGG - Chr2:1993081-1993100 None:intergenic 30.0%
ACAGTACTACTATAAATGCA+TGG + Chr2:1991654-1991673 MsG0280006442.01.T01:intron 30.0%
ACCTACTTATGGTATCTTAT+AGG + Chr2:1993745-1993764 MsG0280006442.01.T01:intron 30.0%
ACCTATAAGATACCATAAGT+AGG - Chr2:1993749-1993768 None:intergenic 30.0%
AGTAATAATCGTGAAACTAG+GGG - Chr2:1993079-1993098 None:intergenic 30.0%
AGTCGTCTGTGTAAATATTA+TGG + Chr2:1991235-1991254 MsG0280006442.01.T01:intron 30.0%
ATATGCAAAGCTTGCAAATT+TGG + Chr2:1991323-1991342 MsG0280006442.01.T01:CDS 30.0%
ATCATGAAAAAGTGGATGAA+AGG - Chr2:1994251-1994270 None:intergenic 30.0%
ATGAAAGACTATTCACTAGA+TGG + Chr2:1992740-1992759 MsG0280006442.01.T01:CDS 30.0%
CAGTAATAATCGTGAAACTA+GGG - Chr2:1993080-1993099 None:intergenic 30.0%
GACACTATAACACAAATCAT+AGG - Chr2:1992351-1992370 None:intergenic 30.0%
GATGTGATGTATAGTCATAA+GGG + Chr2:1995022-1995041 MsG0280006442.01.T01:three_prime_UTR 30.0%
GCTCTTAAGTAAATCTTCAA+AGG - Chr2:1994354-1994373 None:intergenic 30.0%
TAATTTCAGAGCTCAAACTT+TGG - Chr2:1994473-1994492 None:intergenic 30.0%
TCGTCAATATTAACTGAAGA+AGG - Chr2:1991406-1991425 None:intergenic 30.0%
TGATGTGATGTATAGTCATA+AGG + Chr2:1995021-1995040 MsG0280006442.01.T01:three_prime_UTR 30.0%
TGCTGTATCAAACATAGTTA+TGG + Chr2:1993181-1993200 MsG0280006442.01.T01:CDS 30.0%
TGTACAAATAAATCTACCTG+AGG - Chr2:1991160-1991179 None:intergenic 30.0%
TTTATGAAACAAAAGGGATG+AGG - Chr2:1992643-1992662 None:intergenic 30.0%
! AAGACTTTCTCTTTTCAAAG+TGG - Chr2:1993572-1993591 None:intergenic 30.0%
! AGACTTTCTCTTTTCAAAGT+GGG - Chr2:1993571-1993590 None:intergenic 30.0%
! ATTGGAATTGCCGTTTAATT+TGG - Chr2:1990639-1990658 None:intergenic 30.0%
! CTTTGTTTGGTCTTTAAACT+TGG - Chr2:1991014-1991033 None:intergenic 30.0%
!! GATCAATTTTGATGGAATTG+AGG + Chr2:1994091-1994110 MsG0280006442.01.T01:intron 30.0%
!! TATTGTTTCTGTCATGACAT+CGG + Chr2:1991856-1991875 MsG0280006442.01.T01:CDS 30.0%
!! TTTTGATTACCGCAATCATA+AGG - Chr2:1993412-1993431 None:intergenic 30.0%
!!! ATTAGTGTATGGTTTTTTGC+AGG + Chr2:1990787-1990806 MsG0280006442.01.T01:intron 30.0%
!!! ATTTGATTTTCTAGCTTGCA+TGG + Chr2:1993346-1993365 MsG0280006442.01.T01:CDS 30.0%
!!! TGTTTTCCCTATTTTGGAAT+GGG + Chr2:1991063-1991082 MsG0280006442.01.T01:CDS 30.0%
!!! TTTGATTTTCTAGCTTGCAT+GGG + Chr2:1993347-1993366 MsG0280006442.01.T01:CDS 30.0%
!!! TTTTGGCTTGAATCCTATTT+TGG + Chr2:1993021-1993040 MsG0280006442.01.T01:intron 30.0%
AAAGCTCTTAGGAACAATGA+AGG + Chr2:1994941-1994960 MsG0280006442.01.T01:three_prime_UTR 35.0%
AAGCTCTTAGGAACAATGAA+GGG + Chr2:1994942-1994961 MsG0280006442.01.T01:three_prime_UTR 35.0%
ACTAGATGGTAACAGAGAAA+TGG + Chr2:1992754-1992773 MsG0280006442.01.T01:CDS 35.0%
AGTTAATATTGACGACGAGT+TGG + Chr2:1991411-1991430 MsG0280006442.01.T01:intron 35.0%
AGTTCAAGAGATATTGCCAT+AGG + Chr2:1991483-1991502 MsG0280006442.01.T01:CDS 35.0%
ATCGTCACTTAACCTACTTA+TGG + Chr2:1993734-1993753 MsG0280006442.01.T01:intron 35.0%
CAGTAACAGCTGCAATAATA+TGG - Chr2:1994307-1994326 None:intergenic 35.0%
CCAAAATAGGGAAAACAGAT+TGG - Chr2:1991060-1991079 None:intergenic 35.0%
CTTCATAAATCTAACCCCTT+TGG - Chr2:1994843-1994862 None:intergenic 35.0%
GCTATGGCATAAAAAACATG+TGG - Chr2:1994575-1994594 None:intergenic 35.0%
GGTCTTTAAACTTGGCAAAA+GGG - Chr2:1991006-1991025 None:intergenic 35.0%
GTTACTGATATTGACACTAG+TGG + Chr2:1994320-1994339 MsG0280006442.01.T01:CDS 35.0%
TCGAAGTTATCGGACTTAAT+CGG + Chr2:1994768-1994787 MsG0280006442.01.T01:CDS 35.0%
TCGCGAATCAGTAAAGTTAT+AGG - Chr2:1993048-1993067 None:intergenic 35.0%
TCTTTCCTTGTAACATCACT+TGG + Chr2:1990566-1990585 MsG0280006442.01.T01:CDS 35.0%
TGACTATACATCACATCATC+TGG - Chr2:1995019-1995038 None:intergenic 35.0%
TGACTGATGAAGAGATTCTA+AGG + Chr2:1994157-1994176 MsG0280006442.01.T01:CDS 35.0%
TGCCTCAATTATTATAGCTG+CGG + Chr2:1993271-1993290 MsG0280006442.01.T01:CDS 35.0%
TGGAGCTTCTCAATTACAAT+TGG - Chr2:1994744-1994763 None:intergenic 35.0%
TGGTCTTTAAACTTGGCAAA+AGG - Chr2:1991007-1991026 None:intergenic 35.0%
TTACTGTTTGAGAGAGCTTA+TGG + Chr2:1992852-1992871 MsG0280006442.01.T01:intron 35.0%
TTCTCAATTACAATTGGTCC+CGG - Chr2:1994738-1994757 None:intergenic 35.0%
TTTAACCTTATAGGAAGCTG+TGG + Chr2:1992694-1992713 MsG0280006442.01.T01:intron 35.0%
TTTACTTCCACTTTCTTTGC+AGG + Chr2:1991594-1991613 MsG0280006442.01.T01:CDS 35.0%
TTTGAAGATGACACCAAAGA+AGG - Chr2:1993375-1993394 None:intergenic 35.0%
! AAATGGCACTTGGAGTTTTA+AGG + Chr2:1991625-1991644 MsG0280006442.01.T01:CDS 35.0%
! AAGGGTGTGTGAAACTATTA+AGG + Chr2:1994918-1994937 MsG0280006442.01.T01:three_prime_UTR 35.0%
! ATCATCAGAGATGGATTTCT+TGG - Chr2:1994635-1994654 None:intergenic 35.0%
! CACTCTCTGATCAATTTTGA+TGG + Chr2:1994083-1994102 MsG0280006442.01.T01:intron 35.0%
! CCAATCTGTTTTCCCTATTT+TGG + Chr2:1991057-1991076 MsG0280006442.01.T01:CDS 35.0%
! TTCTTTGACATCTTGCTATG+TGG + Chr2:1992805-1992824 MsG0280006442.01.T01:CDS 35.0%
! TTTGGAGTGTACTTGAATAG+TGG - Chr2:1993242-1993261 None:intergenic 35.0%
! TTTTCTTCATTTTGCAGGCT+TGG + Chr2:1991710-1991729 MsG0280006442.01.T01:intron 35.0%
!! ACTCAAACGTATGCTATTTC+AGG + Chr2:1992479-1992498 MsG0280006442.01.T01:intron 35.0%
!! ATCTTCAAAAGTGTCGAAGT+TGG + Chr2:1993386-1993405 MsG0280006442.01.T01:CDS 35.0%
!! ATTCGGATTGGTTTGATTTC+TGG + Chr2:1992579-1992598 MsG0280006442.01.T01:CDS 35.0%
!! CTGTTTTCCCTATTTTGGAA+TGG + Chr2:1991062-1991081 MsG0280006442.01.T01:CDS 35.0%
!! GATTGGTTTGATTTCTGGTA+TGG + Chr2:1992584-1992603 MsG0280006442.01.T01:CDS 35.0%
!! GTTGTTTTCATTAGCCATCA+TGG - Chr2:1992931-1992950 None:intergenic 35.0%
!! TAAGTTGTTTCTGCTTACAG+TGG + Chr2:1992123-1992142 MsG0280006442.01.T01:intron 35.0%
!!! GAGTCAAGTTTTTAGTGATG+AGG + Chr2:1990820-1990839 MsG0280006442.01.T01:CDS 35.0%
!!! GTTTTCCCTATTTTGGAATG+GGG + Chr2:1991064-1991083 MsG0280006442.01.T01:CDS 35.0%
!!! TGTCATGACATCGGTTTTTA+AGG + Chr2:1991865-1991884 MsG0280006442.01.T01:CDS 35.0%
!!! TTTTTAAGGCATCACACCAT+GGG + Chr2:1991879-1991898 MsG0280006442.01.T01:CDS 35.0%
AATAGCCACAGCTTCCTATA+AGG - Chr2:1992702-1992721 None:intergenic 40.0%
AATCCTTCTTCACGTAGACA+TGG + Chr2:1990875-1990894 MsG0280006442.01.T01:CDS 40.0%
ACAATGAGATGCTGTATGCT+TGG - Chr2:1994198-1994217 None:intergenic 40.0%
ACTATGGCTTCAGAGCTTAA+AGG + Chr2:1993669-1993688 MsG0280006442.01.T01:intron 40.0%
AGATGGTAACAGAGAAATGG+TGG + Chr2:1992757-1992776 MsG0280006442.01.T01:CDS 40.0%
AGCTCTTAGGAACAATGAAG+GGG + Chr2:1994943-1994962 MsG0280006442.01.T01:three_prime_UTR 40.0%
AGGAATGCAAAGACTTGCAA+TGG - Chr2:1991140-1991159 None:intergenic 40.0%
ATACCTGTCCTTGATGTAGT+TGG - Chr2:1994042-1994061 None:intergenic 40.0%
ATTGCACTCCAACAGCTTAA+AGG + Chr2:1991797-1991816 MsG0280006442.01.T01:CDS 40.0%
CAACAGCTTAAAGGTCTTCT+TGG + Chr2:1991806-1991825 MsG0280006442.01.T01:CDS 40.0%
CAAGAAGACCTTTAAGCTGT+TGG - Chr2:1991808-1991827 None:intergenic 40.0%
CACAATCGACTAGTATCATG+AGG - Chr2:1993620-1993639 None:intergenic 40.0%
CACCGCAGCTATAATAATTG+AGG - Chr2:1993276-1993295 None:intergenic 40.0%
CAGAGTTAACAGCAAGACTA+TGG - Chr2:1993207-1993226 None:intergenic 40.0%
CAGGTGAGACATATTGAGAA+GGG + Chr2:1992498-1992517 MsG0280006442.01.T01:intron 40.0%
CCAAACCAAGTGATGTTACA+AGG - Chr2:1990574-1990593 None:intergenic 40.0%
CCTCAAGAAAAGAGATATCC+AGG + Chr2:1994373-1994392 MsG0280006442.01.T01:CDS 40.0%
CCTCTTGTGTATGCTTTCAT+GGG + Chr2:1991459-1991478 MsG0280006442.01.T01:CDS 40.0%
CCTTGTAACATCACTTGGTT+TGG + Chr2:1990571-1990590 MsG0280006442.01.T01:CDS 40.0%
CGAAGTTATCGGACTTAATC+GGG + Chr2:1994769-1994788 MsG0280006442.01.T01:CDS 40.0%
CTAGGAACAATGAACGTTGT+TGG + Chr2:1992782-1992801 MsG0280006442.01.T01:CDS 40.0%
CTCAAACTCCAACTACATCA+AGG + Chr2:1994031-1994050 MsG0280006442.01.T01:CDS 40.0%
CTCTTCCCCATTCCAAAATA+GGG - Chr2:1991072-1991091 None:intergenic 40.0%
CTGTTGGAGTGCAATAGTAA+TGG - Chr2:1991792-1991811 None:intergenic 40.0%
GAAGTTATCGGACTTAATCG+GGG + Chr2:1994770-1994789 MsG0280006442.01.T01:CDS 40.0%
GTCAATCTTCCACAGAAGAA+TGG - Chr2:1993324-1993343 None:intergenic 40.0%
GTTTCTGCTTACAGTGGAAT+TGG + Chr2:1992129-1992148 MsG0280006442.01.T01:intron 40.0%
TCAGGTGAGACATATTGAGA+AGG + Chr2:1992497-1992516 MsG0280006442.01.T01:intron 40.0%
TCCTCTTGTGTATGCTTTCA+TGG + Chr2:1991458-1991477 MsG0280006442.01.T01:CDS 40.0%
TCTCAATTACAATTGGTCCC+GGG - Chr2:1994737-1994756 None:intergenic 40.0%
TGCTTACATAGTGCATACTG+AGG - Chr2:1991351-1991370 None:intergenic 40.0%
TGGAAGTAAAAGCAAGAGCA+AGG - Chr2:1991584-1991603 None:intergenic 40.0%
TTAACCCTCTTTATGCATGC+AGG + Chr2:1993845-1993864 MsG0280006442.01.T01:intron 40.0%
TTACATTACAAGGGCAGACA+AGG + Chr2:1992383-1992402 MsG0280006442.01.T01:CDS 40.0%
TTATAGGAAGCTGTGGCTAT+TGG + Chr2:1992701-1992720 MsG0280006442.01.T01:intron 40.0%
TTCAAGGGTGATTTGATTGC+TGG + Chr2:1991109-1991128 MsG0280006442.01.T01:CDS 40.0%
TTCCAGGGACAACTGTTTAT+AGG + Chr2:1993934-1993953 MsG0280006442.01.T01:CDS 40.0%
TTCCTATAAACAGTTGTCCC+TGG - Chr2:1993939-1993958 None:intergenic 40.0%
TTTAGTGCTGCAATTCGGAT+TGG + Chr2:1992567-1992586 MsG0280006442.01.T01:CDS 40.0%
! AAAGCAAGAGCAAGGTATTC+AGG - Chr2:1991576-1991595 None:intergenic 40.0%
! AAGAGAGGAAGGGTAGTTTT+TGG - Chr2:1992221-1992240 None:intergenic 40.0%
! CCTGGATATCTCTTTTCTTG+AGG - Chr2:1994376-1994395 None:intergenic 40.0%
! GTTGCATCTTTTGGTCCAAA+GGG + Chr2:1994825-1994844 MsG0280006442.01.T01:CDS 40.0%
! TGTTGCATCTTTTGGTCCAA+AGG + Chr2:1994824-1994843 MsG0280006442.01.T01:CDS 40.0%
! TTGCATCTTTTGGTCCAAAG+GGG + Chr2:1994826-1994845 MsG0280006442.01.T01:CDS 40.0%
! TTTTCAAAACCTCGCCATGA+TGG + Chr2:1992914-1992933 MsG0280006442.01.T01:intron 40.0%
!! TCTTGGAAAAGTGTCTGCTT+AGG - Chr2:1990944-1990963 None:intergenic 40.0%
!!! GATGTTTTGACAGCTTCTCT+TGG + Chr2:1994707-1994726 MsG0280006442.01.T01:intron 40.0%
!!! GTTTTTAAGGCATCACACCA+TGG + Chr2:1991878-1991897 MsG0280006442.01.T01:CDS 40.0%
!!! TTTTAAGGCATCACACCATG+GGG + Chr2:1991880-1991899 MsG0280006442.01.T01:CDS 40.0%
AACAGAGAAATGGTGGCACT+AGG + Chr2:1992764-1992783 MsG0280006442.01.T01:CDS 45.0%
AACGACTCCTGCAAAGAAAG+TGG - Chr2:1991604-1991623 None:intergenic 45.0%
ACTCCAACTACATCAAGGAC+AGG + Chr2:1994036-1994055 MsG0280006442.01.T01:CDS 45.0%
ATGAAGCAGCCATTCTTCTG+TGG + Chr2:1993312-1993331 MsG0280006442.01.T01:CDS 45.0%
ATTACAAGGGCAGACAAGGA+TGG + Chr2:1992387-1992406 MsG0280006442.01.T01:CDS 45.0%
CAACAATGGCAGCATGAGAT+AGG - Chr2:1991751-1991770 None:intergenic 45.0%
CCTCTTCCCCATTCCAAAAT+AGG - Chr2:1991073-1991092 None:intergenic 45.0%
CTATCTCATGCTGCCATTGT+TGG + Chr2:1991749-1991768 MsG0280006442.01.T01:CDS 45.0%
CTTGACACTTTGTGCATGAG+TGG - Chr2:1990917-1990936 None:intergenic 45.0%
CTTTGCAGGAGTCGTTCAAA+TGG + Chr2:1991608-1991627 MsG0280006442.01.T01:CDS 45.0%
GCTGCCATTGTTGGATTCAT+GGG + Chr2:1991758-1991777 MsG0280006442.01.T01:CDS 45.0%
TAGTGATGAGGCTGTGTCAA+GGG + Chr2:1990832-1990851 MsG0280006442.01.T01:CDS 45.0%
TCAGCTGTGAACTATATGGC+TGG + Chr2:1993149-1993168 MsG0280006442.01.T01:CDS 45.0%
TCCACCCATGAATCCAACAA+TGG - Chr2:1991765-1991784 None:intergenic 45.0%
TCGCTCAGCTGTGAACTATA+TGG + Chr2:1993145-1993164 MsG0280006442.01.T01:CDS 45.0%
TGCAAGTCTTTGCATTCCTC+AGG + Chr2:1991141-1991160 MsG0280006442.01.T01:CDS 45.0%
TGCTGCCATTGTTGGATTCA+TGG + Chr2:1991757-1991776 MsG0280006442.01.T01:CDS 45.0%
TTAGTGATGAGGCTGTGTCA+AGG + Chr2:1990831-1990850 MsG0280006442.01.T01:CDS 45.0%
TTCCCTAGTACTGCAGTCTT+TGG - Chr2:1993912-1993931 None:intergenic 45.0%
TTCTGGTATGGTAGCACTCA+CGG + Chr2:1992596-1992615 MsG0280006442.01.T01:CDS 45.0%
TTTCATTAGCCATCATGGCG+AGG - Chr2:1992926-1992945 None:intergenic 45.0%
! ACATCTTGCTATGTGGCTAC+AGG + Chr2:1992812-1992831 MsG0280006442.01.T01:CDS 45.0%
! ATTGAGGCAAGCACTGCATT+TGG - Chr2:1993260-1993279 None:intergenic 45.0%
! CCCATGAAAGCATACACAAG+AGG - Chr2:1991462-1991481 None:intergenic 45.0%
! GGTGATGCTGTTGCATCTTT+TGG + Chr2:1994816-1994835 MsG0280006442.01.T01:CDS 45.0%
! TCCAGGCATGTTGATTGTCA+GGG + Chr2:1993989-1994008 MsG0280006442.01.T01:CDS 45.0%
! TTCCAGGCATGTTGATTGTC+AGG + Chr2:1993988-1994007 MsG0280006442.01.T01:CDS 45.0%
!! CGAAGTTGGCCTTATGATTG+CGG + Chr2:1993400-1993419 MsG0280006442.01.T01:CDS 45.0%
!! GTGCTGCTTTGGGATATTGA+AGG - Chr2:1993965-1993984 None:intergenic 45.0%
!! TGGAAAAGTGTCTGCTTAGG+AGG - Chr2:1990941-1990960 None:intergenic 45.0%
!!! CCTATTTTGGAATGGGGAAG+AGG + Chr2:1991070-1991089 MsG0280006442.01.T01:CDS 45.0%
!! ATTAATTTATTAATAGATAA+TGG - Chr2:1992531-1992550 None:intergenic 5.0%
!! TTAATTTAAAAGAATAATAT+TGG - Chr2:1990657-1990676 None:intergenic 5.0%
AAGAGAGACACCACAGCTAC+TGG - Chr2:1991510-1991529 None:intergenic 50.0%
ACAGCTTCTCTTGGCAAACC+CGG + Chr2:1994716-1994735 MsG0280006442.01.T01:intron 50.0%
ACCCTCTTTATGCATGCAGG+TGG + Chr2:1993848-1993867 MsG0280006442.01.T01:intron 50.0%
ACCCTGACAATCAACATGCC+TGG - Chr2:1993993-1994012 None:intergenic 50.0%
AGGCCAAAGACTGCAGTACT+AGG + Chr2:1993906-1993925 MsG0280006442.01.T01:CDS 50.0%
AGTCCGATAACTTCGACGCA+TGG - Chr2:1994764-1994783 None:intergenic 50.0%
CAGTACTAGGGAAGCTTCCA+GGG + Chr2:1993919-1993938 MsG0280006442.01.T01:CDS 50.0%
GAAAGTGAAGGCTTACCCCA+TGG - Chr2:1991898-1991917 None:intergenic 50.0%
GCACCATGTCTACGTGAAGA+AGG - Chr2:1990881-1990900 None:intergenic 50.0%
GCCACCTGCATGCATAAAGA+GGG - Chr2:1993852-1993871 None:intergenic 50.0%
GCCATTGTTGGATTCATGGG+TGG + Chr2:1991761-1991780 MsG0280006442.01.T01:CDS 50.0%
GCTCCATGCGTCGAAGTTAT+CGG + Chr2:1994758-1994777 MsG0280006442.01.T01:CDS 50.0%
GCTTGGAAGTCTGCTTTCAG+AGG + Chr2:1991530-1991549 MsG0280006442.01.T01:CDS 50.0%
GGAGTCGTTCAAATGGCACT+TGG + Chr2:1991615-1991634 MsG0280006442.01.T01:CDS 50.0%
GGCCAAAGACTGCAGTACTA+GGG + Chr2:1993907-1993926 MsG0280006442.01.T01:CDS 50.0%
GTGGCTACAGGTACCAAAGA+GGG + Chr2:1992824-1992843 MsG0280006442.01.T01:intron 50.0%
TGCCACCTGCATGCATAAAG+AGG - Chr2:1993853-1993872 None:intergenic 50.0%
TGGCTGCTTCATAGTCGATC+AGG - Chr2:1993304-1993323 None:intergenic 50.0%
TGTGGCTACAGGTACCAAAG+AGG + Chr2:1992823-1992842 MsG0280006442.01.T01:intron 50.0%
!! CCTGGAATCTGTGCTGCTTT+GGG - Chr2:1993975-1993994 None:intergenic 50.0%
CACCACAGCTACTGGTCCTA+TGG - Chr2:1991502-1991521 None:intergenic 55.0%
CAGCTTCTCTTGGCAAACCC+GGG + Chr2:1994717-1994736 MsG0280006442.01.T01:intron 55.0%
CCCAAAGCAGCACAGATTCC+AGG + Chr2:1993972-1993991 MsG0280006442.01.T01:CDS 55.0%
GCAGTACTAGGGAAGCTTCC+AGG + Chr2:1993918-1993937 MsG0280006442.01.T01:CDS 55.0%
GCTGTGGTGTCTCTCTTGCT+TGG + Chr2:1991513-1991532 MsG0280006442.01.T01:CDS 55.0%
GCTTGCATGGGAGCCTTCTT+TGG + Chr2:1993359-1993378 MsG0280006442.01.T01:CDS 55.0%
TGCCATAGGACCAGTAGCTG+TGG + Chr2:1991497-1991516 MsG0280006442.01.T01:CDS 55.0%
!! GCCTGGAATCTGTGCTGCTT+TGG - Chr2:1993976-1993995 None:intergenic 55.0%
TGAGGCTGTGTCAAGGGCCA+TGG + Chr2:1990838-1990857 MsG0280006442.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 1990551 1995070 1990551 ID=MsG0280006442.01;Name=MsG0280006442.01
Chr2 mRNA 1990551 1995070 1990551 ID=MsG0280006442.01.T01;Parent=MsG0280006442.01;Name=MsG0280006442.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0.91|1|1|0.91|0.92|13|210|654
Chr2 exon 1990551 1990592 1990551 ID=MsG0280006442.01.T01:exon:282;Parent=MsG0280006442.01.T01
Chr2 exon 1990809 1991162 1990809 ID=MsG0280006442.01.T01:exon:283;Parent=MsG0280006442.01.T01
Chr2 exon 1991315 1991363 1991315 ID=MsG0280006442.01.T01:exon:284;Parent=MsG0280006442.01.T01
Chr2 exon 1991442 1991646 1991442 ID=MsG0280006442.01.T01:exon:285;Parent=MsG0280006442.01.T01
Chr2 exon 1991727 1991901 1991727 ID=MsG0280006442.01.T01:exon:286;Parent=MsG0280006442.01.T01
Chr2 exon 1992306 1992419 1992306 ID=MsG0280006442.01.T01:exon:287;Parent=MsG0280006442.01.T01
Chr2 exon 1992501 1992617 1992501 ID=MsG0280006442.01.T01:exon:288;Parent=MsG0280006442.01.T01
Chr2 exon 1992707 1992833 1992707 ID=MsG0280006442.01.T01:exon:289;Parent=MsG0280006442.01.T01
Chr2 exon 1993135 1993421 1993135 ID=MsG0280006442.01.T01:exon:290;Parent=MsG0280006442.01.T01
Chr2 exon 1993867 1994057 1993867 ID=MsG0280006442.01.T01:exon:291;Parent=MsG0280006442.01.T01
Chr2 exon 1994143 1994228 1994143 ID=MsG0280006442.01.T01:exon:292;Parent=MsG0280006442.01.T01
Chr2 exon 1994318 1994394 1994318 ID=MsG0280006442.01.T01:exon:293;Parent=MsG0280006442.01.T01
Chr2 exon 1994720 1995070 1994720 ID=MsG0280006442.01.T01:exon:294;Parent=MsG0280006442.01.T01
Chr2 CDS 1990551 1990592 1990551 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1990809 1991162 1990809 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1991315 1991363 1991315 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1991442 1991646 1991442 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1991727 1991901 1991727 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1992306 1992419 1992306 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1992501 1992617 1992501 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1992707 1992833 1992707 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1993135 1993421 1993135 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1993867 1994057 1993867 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1994143 1994228 1994143 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1994318 1994394 1994318 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 CDS 1994720 1994860 1994720 ID=MsG0280006442.01.T01:cds;Parent=MsG0280006442.01.T01
Chr2 three_prime_UTR 1994861 1995070 1994861 ID=MsG0280006442.01.T01:three_prime_utr;Parent=MsG0280006442.01.T01
Gene Sequence

>MsG0280006442.01.T01

AAATTAAGGGTCATATCTTTCCTTGTAACATCACTTGGTTTGGTTATTAAAATGAGTCAAGTTTTTAGTGATGAGGCTGTGTCAAGGGCCATGGAAGAAATAAAAAGCAATCCTTCTTCACGTAGACATGGTGCTGATCATAGTCATCCACTCATGCACAAAGTGTCAAGTCCTCCTAAGCAGACACTTTTCCAAGATTTCAAACACAATTTCAATGAAACTTTCTTCTCTGATGACCCTTTTGCCAAGTTTAAAGACCAAACAAAGAAAAGAAAGTTTGTTCTTGGACTCCAATCTGTTTTCCCTATTTTGGAATGGGGAAGAGGTTACAATCTTAAAAGTTTCAAGGGTGATTTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGAACCTCAGTATGCACTATATACAAGTTTTGTTGCTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGAAGTCTGCTTTCAGAGGAGATCAGTGACTTCAAAAGTCCTGAATACCTTGCTCTTGCTTTTACTTCCACTTTCTTTGCAGGAGTCGTTCAAATGGCACTTGGAGTTTTAAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAGCTTAAAGGTCTTCTTGGTATAAAAAAATTCACCAAGAAAACTGATATTGTTTCTGTCATGACATCGGTTTTTAAGGCATCACACCATGGGGCTAAGAAGAATAAGAAACTCTTTTGGGTGTCTGCAATGTCTCCTATGATTTGTGTTATAGTGTCTACTTTATCTGTTTACATTACAAGGGCAGACAAGGATGGAGTAGCAATTGTGAGACATATTGAGAAGGGTGTCAATCCATTATCTATTAATAAATTAATTTTCAGTGGAAAATATTTTAGTGCTGCAATTCGGATTGGTTTGATTTCTGGTATGGTAGCACTCACGGAAGCTGTGGCTATTGGAAGAACATTTGCTGCTATGAAAGACTATTCACTAGATGGTAACAGAGAAATGGTGGCACTAGGAACAATGAACGTTGTTGGTTCTTTGACATCTTGCTATGTGGCTACAGGATCATTTTCTCGCTCAGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGGCCATAGTCTTGCTGTTAACTCTGTTAGTGATTACACCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATTATAGCTGCGGTGATGAGCCTGATCGACTATGAAGCAGCCATTCTTCTGTGGAAGATTGACAAATTTGATTTTCTAGCTTGCATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTCGAAGTTGGCCTTATGATTGCGGTGGCAATATCTTTCGCCAAAATTCTTTTACAAGTGACAAGGCCAAAGACTGCAGTACTAGGGAAGCTTCCAGGGACAACTGTTTATAGGAACATCCTTCAATATCCCAAAGCAGCACAGATTCCAGGCATGTTGATTGTCAGGGTTGATTCAGCAATCTATTTCTCAAACTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGCATACAGCATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATTCCTTTGAAGATTTACTTAAGAGCCTCAAGAAAAGAGATATCCAGCTTCTCTTGGCAAACCCGGGACCAATTGTAATTGAGAAGCTCCATGCGTCGAAGTTATCGGACTTAATCGGGGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCATCTTTTGGTCCAAAGGGGTTAGATTTATGA

Protein sequence

>MsG0280006442.01.T01

KLRVISFLVTSLGLVIKMSQVFSDEAVSRAMEEIKSNPSSRRHGADHSHPLMHKVSSPPKQTLFQDFKHNFNETFFSDDPFAKFKDQTKKRKFVLGLQSVFPILEWGRGYNLKSFKGDLIAGLTIASLCIPQDIAYAKLANLEPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSLLSEEISDFKSPEYLALAFTSTFFAGVVQMALGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKKFTKKTDIVSVMTSVFKASHHGAKKNKKLFWVSAMSPMICVIVSTLSVYITRADKDGVAIVRHIEKGVNPLSINKLIFSGKYFSAAIRIGLISGMVALTEAVAIGRTFAAMKDYSLDGNREMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMAIVLLLTLLVITPLFKYTPNAVLASIIIAAVMSLIDYEAAILLWKIDKFDFLACMGAFFGVIFKSVEVGLMIAVAISFAKILLQVTRPKTAVLGKLPGTTVYRNILQYPKAAQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQHLIVEMSPVTDIDTSGIHSFEDLLKSLKKRDIQLLLANPGPIVIEKLHASKLSDLIGEDKIFLTVGDAVASFGPKGLDL*