AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002935.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002935.01.T01 MTR_0126s0080 95.513 468 11 4 1 467 1 459 0.0 907
MsG0180002935.01.T01 MTR_7g092750 74.944 443 91 6 73 515 42 464 0.0 672
MsG0180002935.01.T01 MTR_7g092750 69.977 443 87 7 73 515 42 438 0.0 612
MsG0180002935.01.T01 MTR_7g092750 75.597 377 76 3 139 515 3 363 0.0 587
MsG0180002935.01.T01 MTR_8g040120 60.518 309 110 4 208 513 166 465 2.72e-129 384
MsG0180002935.01.T01 MTR_7g089800 58.716 327 121 5 192 514 107 423 8.64e-128 379
MsG0180002935.01.T01 MTR_7g089800 61.564 307 104 5 212 514 156 452 2.42e-127 379
MsG0180002935.01.T01 MTR_2g086420 43.927 494 189 11 65 514 20 469 1.50e-125 376
MsG0180002935.01.T01 MTR_2g086420 43.927 494 188 12 65 514 20 468 8.30e-124 372
MsG0180002935.01.T01 MTR_4g053250 43.220 472 205 9 75 514 21 461 1.39e-115 350
MsG0180002935.01.T01 MTR_5g054900 54.181 299 126 3 219 514 63 353 1.61e-112 337
MsG0180002935.01.T01 MTR_5g054900 54.181 299 126 3 219 514 144 434 1.53e-111 338
MsG0180002935.01.T01 MTR_5g054900 53.512 299 124 4 219 514 63 349 7.07e-109 328
MsG0180002935.01.T01 MTR_5g054900 53.512 299 124 4 219 514 174 460 1.14e-107 329
MsG0180002935.01.T01 MTR_3g087940 51.792 307 139 3 208 514 64 361 1.66e-103 315
MsG0180002935.01.T01 MTR_1g111310 48.615 325 155 4 190 514 395 707 7.92e-98 311
MsG0180002935.01.T01 MTR_1g111310 47.962 319 146 4 190 508 28 326 2.42e-89 289
MsG0180002935.01.T01 MTR_5g060950 47.841 301 149 2 211 511 54 346 1.97e-87 273
MsG0180002935.01.T01 MTR_8g091650 43.188 345 175 6 170 514 33 356 3.76e-84 265
MsG0180002935.01.T01 MTR_3g073560 49.135 289 139 2 224 512 65 345 2.01e-83 270
MsG0180002935.01.T01 MTR_8g091650 47.917 288 141 4 227 514 5 283 3.97e-83 259
MsG0180002935.01.T01 MTR_8g091650 47.766 291 143 4 224 514 111 392 4.89e-82 260
MsG0180002935.01.T01 MTR_3g044820 48.500 200 88 4 190 384 19 208 5.26e-57 189
MsG0180002935.01.T01 MTR_1g090370 30.837 227 124 6 286 507 30 228 7.71e-21 91.7
MsG0180002935.01.T01 MTR_1g111320 47.222 108 47 2 190 297 120 217 1.16e-17 82.4
MsG0180002935.01.T01 MTR_2g076140 24.091 220 129 3 304 503 8 209 3.66e-12 66.2
MsG0180002935.01.T01 MTR_7g068860 25.731 171 123 2 338 504 49 219 4.36e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002935.01.T01 AT5G06839 63.348 442 140 10 91 515 23 459 0.0 544
MsG0180002935.01.T01 AT5G06839 60.592 439 116 8 90 515 22 416 0.0 518
MsG0180002935.01.T01 AT5G06839 60.455 440 116 9 90 515 22 417 1.31e-180 513
MsG0180002935.01.T01 AT1G08320 46.596 470 199 10 69 514 12 453 4.13e-129 385
MsG0180002935.01.T01 AT1G08320 46.596 470 199 10 69 514 12 453 4.13e-129 385
MsG0180002935.01.T01 AT1G08320 46.596 470 199 10 69 514 12 453 4.13e-129 385
MsG0180002935.01.T01 AT1G08320 58.462 325 113 5 191 514 26 329 8.55e-127 374
MsG0180002935.01.T01 AT1G08320 58.462 325 113 5 191 514 26 329 8.55e-127 374
MsG0180002935.01.T01 AT5G06950 56.410 312 124 4 205 514 29 330 1.15e-118 352
MsG0180002935.01.T01 AT5G06950 56.410 312 124 4 205 514 29 330 1.15e-118 352
MsG0180002935.01.T01 AT5G06950 56.410 312 124 4 205 514 29 330 1.15e-118 352
MsG0180002935.01.T01 AT5G06950 56.410 312 124 4 205 514 29 330 1.15e-118 352
MsG0180002935.01.T01 AT5G06950 56.410 312 124 4 205 514 29 330 1.15e-118 352
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 3 303 9.14e-117 347
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 30 330 1.00e-116 347
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 30 330 1.00e-116 347
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 30 330 1.00e-116 347
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 30 330 1.00e-116 347
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 24 324 2.85e-116 346
MsG0180002935.01.T01 AT5G06960 59.661 295 109 3 222 514 44 330 3.20e-116 346
MsG0180002935.01.T01 AT5G06960 59.661 295 109 3 222 514 44 330 3.20e-116 346
MsG0180002935.01.T01 AT5G06960 59.661 295 109 3 222 514 24 310 3.40e-116 345
MsG0180002935.01.T01 AT3G12250 55.663 309 127 3 208 514 55 355 1.27e-115 345
MsG0180002935.01.T01 AT1G68640 56.209 306 126 3 210 513 152 451 2.32e-112 341
MsG0180002935.01.T01 AT5G10030 52.721 294 130 3 221 514 78 362 4.16e-102 311
MsG0180002935.01.T01 AT5G10030 52.721 294 130 3 221 514 78 362 4.16e-102 311
MsG0180002935.01.T01 AT5G10030 52.721 294 130 3 221 514 78 362 4.16e-102 311
MsG0180002935.01.T01 AT5G10030 52.721 294 130 3 221 514 78 362 4.16e-102 311
MsG0180002935.01.T01 AT5G10030 52.721 294 130 3 221 514 78 362 4.16e-102 311
MsG0180002935.01.T01 AT5G65210 50.658 304 136 5 211 514 7 296 2.66e-98 299
MsG0180002935.01.T01 AT5G65210 44.041 386 194 8 130 514 2 366 3.25e-98 301
MsG0180002935.01.T01 AT5G65210 44.041 386 194 8 130 514 2 366 3.25e-98 301
MsG0180002935.01.T01 AT5G65210 44.041 386 194 8 130 514 2 366 3.25e-98 301
MsG0180002935.01.T01 AT5G65210 44.041 386 194 8 130 514 2 366 3.25e-98 301
MsG0180002935.01.T01 AT5G65210 44.041 386 194 8 130 514 2 366 3.25e-98 301
MsG0180002935.01.T01 AT5G65210 44.041 386 194 8 130 514 2 366 3.25e-98 301
MsG0180002935.01.T01 AT1G22070 51.125 311 146 2 204 514 78 382 1.61e-97 300
MsG0180002935.01.T01 AT1G77920 49.074 324 135 4 204 514 60 366 3.71e-97 299
MsG0180002935.01.T01 AT1G58330 27.391 230 140 5 293 504 3 223 1.19e-16 79.7

Find 95 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCAAGTGCTTATGATTT+AGG 0.170937 1:-53383593 MsG0180002935.01.T01:CDS
GAGCATAGAATTGTTATTAT+TGG 0.196059 1:+53384033 None:intergenic
CATGACCATCAAATTTCTTT+TGG 0.210584 1:-53383890 MsG0180002935.01.T01:CDS
CTAATGGTATTCATAGAAAT+TGG 0.285782 1:+53381555 None:intergenic
ATTTATACCTTTGAATTAGA+TGG 0.288466 1:+53382800 None:intergenic
TGCTTATGATTTAGGTGAAT+TGG 0.291461 1:-53383585 MsG0180002935.01.T01:CDS
ACCCGCATATACCAAGTATT+TGG 0.301372 1:+53380003 None:intergenic
TTTAAGCAATCCTCCTAATA+TGG 0.308534 1:-53379889 MsG0180002935.01.T01:CDS
GCAATGTTTGATGTGGAGTA+TGG 0.316893 1:-53381417 MsG0180002935.01.T01:CDS
AATGGGAGGAGGTGCACTTT+TGG 0.318194 1:-53381595 MsG0180002935.01.T01:CDS
CTCATCACTCACACTATTCT+TGG 0.319137 1:+53376037 None:intergenic
CAGACCATCTGAACTCATTA+AGG 0.331549 1:-53381172 MsG0180002935.01.T01:intron
CCCATGTAGTTAGCCATATT+AGG 0.347360 1:+53379876 None:intergenic
GTTATATGTGGAAAATTGTT+TGG 0.359400 1:-53381313 MsG0180002935.01.T01:CDS
GGCTAACTACATGGGACAAA+TGG 0.386586 1:-53379868 MsG0180002935.01.T01:CDS
CACATGAAGCAACGTTCAGC+TGG 0.396922 1:+53381207 None:intergenic
GGAGTATGGGAGGTGGTTAG+AGG 0.399529 1:-53381403 MsG0180002935.01.T01:CDS
AAGAGTGGAGAGCTTGTTCA+TGG 0.411247 1:+53379839 None:intergenic
TCATTCCAAAAGAAATTTGA+TGG 0.416690 1:+53383885 None:intergenic
ATTTAATTAACCTTAGGATC+TGG 0.426639 1:+53382311 None:intergenic
TTCGAGCATTGAGTTCTCTC+TGG 0.430265 1:-53376074 MsG0180002935.01.T01:CDS
TCATAGAAATTGGAATTCCT+TGG 0.435269 1:+53381565 None:intergenic
TGGAAAGATACCTGAGCTAA+TGG 0.441696 1:+53381539 None:intergenic
TCGTCAAGCTGCAAGATGTT+TGG 0.442179 1:-53376124 MsG0180002935.01.T01:CDS
TATAATGTACCTACCTTGAC+AGG 0.447542 1:+53382497 None:intergenic
GGTTGAGTGCATCAAGCCCT+TGG 0.448691 1:+53379943 None:intergenic
GATGTTGATTCTGTTGTTGT+TGG 0.452856 1:+53383927 None:intergenic
TTATAGTCTCTGAAAGAGAT+TGG 0.452928 1:+53379922 None:intergenic
TCCTAATATGGCTAACTACA+TGG 0.453054 1:-53379877 MsG0180002935.01.T01:CDS
CTTACGGAGCACCAAATACT+TGG 0.457443 1:-53380014 MsG0180002935.01.T01:CDS
AGTATTTGGTGCTCCGTAAG+AGG 0.471286 1:+53380017 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 1:-53381198 MsG0180002935.01.T01:CDS
AAGTCAAATTGAGCCTCTTA+CGG 0.480461 1:-53380030 MsG0180002935.01.T01:CDS
ACAGAGAACTCATCATCATC+AGG 0.490034 1:-53382884 MsG0180002935.01.T01:intron
GTTGAGTGCATCAAGCCCTT+GGG 0.490876 1:+53379944 None:intergenic
TTTAGTGGTGCAGGTGCAGA+AGG 0.498239 1:+53382521 None:intergenic
ACCAAATACTTGGTATATGC+GGG 0.505004 1:-53380004 MsG0180002935.01.T01:CDS
ACACTATTCTTGGCGAGGAC+GGG 0.506076 1:+53376047 None:intergenic
GTATTTGGTATAGGTTAGCA+TGG 0.513035 1:-53382624 MsG0180002935.01.T01:intron
TCTATGAATACCATTAGCTC+AGG 0.516579 1:-53381549 MsG0180002935.01.T01:intron
ACTTGCATGAAAATGAGCTT+AGG 0.517257 1:-53381335 MsG0180002935.01.T01:CDS
AAAACCATCTCAACCGTCCA+TGG 0.517927 1:-53382570 MsG0180002935.01.T01:CDS
TTTACCTTAATGAGTTCAGA+TGG 0.518372 1:+53381168 None:intergenic
TAATAACAATTCTATGCTCA+TGG 0.520824 1:-53384029 MsG0180002935.01.T01:CDS
ATCTCAACCGTCCATGGAGT+TGG 0.523885 1:-53382564 MsG0180002935.01.T01:CDS
CACCAAATACTTGGTATATG+CGG 0.532159 1:-53380005 MsG0180002935.01.T01:CDS
ACCTTTGAATTAGATGGTGG+TGG 0.533763 1:+53382806 None:intergenic
AACTCCATGGACGGTTGAGA+TGG 0.534438 1:+53382566 None:intergenic
CAGCTGAACGTTGCTTCATG+TGG 0.535836 1:-53381206 MsG0180002935.01.T01:CDS
CACACTATTCTTGGCGAGGA+CGG 0.538683 1:+53376046 None:intergenic
TGGTTTGCCAACTCCATGGA+CGG 0.539075 1:+53382557 None:intergenic
ATCAACACAAGAGGCAGAAG+AGG 0.540377 1:-53379973 MsG0180002935.01.T01:CDS
TCGTTGGTTTGCCAACTCCA+TGG 0.541761 1:+53382553 None:intergenic
CAAGTAGTTGCTAGGCATAG+AGG 0.542058 1:+53383844 None:intergenic
GAACGTTGCTTCATGTGGAT+TGG 0.542533 1:-53381201 MsG0180002935.01.T01:CDS
GGTGGTTAGAGGAGCATCAC+AGG 0.543826 1:-53381392 MsG0180002935.01.T01:CDS
GATGCAGACGATGAACTGTT+TGG 0.543853 1:+53376160 None:intergenic
ACATGAAGCAACGTTCAGCT+GGG 0.545343 1:+53381208 None:intergenic
GCTACATGCATTGGTTGAGA+TGG 0.551490 1:+53382830 None:intergenic
AAAACTCACAAGTAGTTGCT+AGG 0.556391 1:+53383836 None:intergenic
AAATGAGCTTAGGTTATATG+TGG 0.558714 1:-53381325 MsG0180002935.01.T01:CDS
TAGGGCGTGTTAATGGGAGG+AGG 0.559293 1:-53381606 MsG0180002935.01.T01:CDS
ACCACCACCATCTAATTCAA+AGG 0.566192 1:-53382807 MsG0180002935.01.T01:intron
TATTTGGTATAGGTTAGCAT+GGG 0.566436 1:-53382623 MsG0180002935.01.T01:intron
GGAGCCACTTGTTATTGGAG+AGG 0.576956 1:+53382595 None:intergenic
GGTGGTGGTGCTACATGCAT+TGG 0.577778 1:+53382821 None:intergenic
CTTTGATCTTGAACACTAGA+GGG 0.579134 1:+53383518 None:intergenic
GCAGAAGAGGCACTTTCCCA+AGG 0.580930 1:-53379960 MsG0180002935.01.T01:CDS
GGGAAAATGTTAAGAGTTGG+TGG 0.582239 1:+53382851 None:intergenic
CAATGTTTGATGTGGAGTAT+GGG 0.584437 1:-53381416 MsG0180002935.01.T01:CDS
AGAGGCTGCAATGTTTGATG+TGG 0.585256 1:-53381424 MsG0180002935.01.T01:CDS
ATGTAGTTAGCCATATTAGG+AGG 0.586012 1:+53379879 None:intergenic
TATACCTTTGAATTAGATGG+TGG 0.586657 1:+53382803 None:intergenic
TGCACCACTAAAACCTGTCA+AGG 0.587111 1:-53382510 MsG0180002935.01.T01:intron
TCTTTGATCTTGAACACTAG+AGG 0.589650 1:+53383517 None:intergenic
ATAGAGGATGAAGATGAAGA+TGG 0.597582 1:+53383860 None:intergenic
CCTAATATGGCTAACTACAT+GGG 0.597846 1:-53379876 MsG0180002935.01.T01:CDS
CAGAAGAGGCACTTTCCCAA+GGG 0.599073 1:-53379959 MsG0180002935.01.T01:CDS
CTACATGCATTGGTTGAGAT+GGG 0.602831 1:+53382831 None:intergenic
GATGGGAAAATGTTAAGAGT+TGG 0.603515 1:+53382848 None:intergenic
TCTCACAAAACTTTCAAGAG+TGG 0.609018 1:+53379824 None:intergenic
TTCAGCAGCTAGAAACAAGT+AGG 0.617268 1:-53382029 MsG0180002935.01.T01:CDS
CATGAAGCAACGTTCAGCTG+GGG 0.618932 1:+53381209 None:intergenic
CACTCACACTATTCTTGGCG+AGG 0.619291 1:+53376042 None:intergenic
TTGATGTGGAGTATGGGAGG+TGG 0.624452 1:-53381410 MsG0180002935.01.T01:CDS
GCAGAAAGAGAATAATCGCA+AGG 0.635102 1:-53382372 MsG0180002935.01.T01:intron
CACTGCAGGCAGATAATCTG+AGG 0.637739 1:-53376185 MsG0180002935.01.T01:intron
ACTTCAAGTTCTGAACATGA+AGG 0.639217 1:-53382344 MsG0180002935.01.T01:CDS
TTAGTGGTGCAGGTGCAGAA+GGG 0.642942 1:+53382522 None:intergenic
GTTGCAACAATCAACACAAG+AGG 0.644854 1:-53379982 MsG0180002935.01.T01:CDS
TTAACCTCTCCAATAACAAG+TGG 0.650451 1:-53382599 MsG0180002935.01.T01:CDS
TGTTTGATGTGGAGTATGGG+AGG 0.654392 1:-53381413 MsG0180002935.01.T01:CDS
AAGACTTGCTCAGAATAGAG+AGG 0.666657 1:-53382213 MsG0180002935.01.T01:CDS
AAAATGTTAAGAGTTGGTGG+TGG 0.691086 1:+53382854 None:intergenic
TGATGGTCATGCATATGATG+AGG 0.700141 1:+53383902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAATTTAAAATATAAAT+GGG + Chr1:53381093-53381112 None:intergenic 0.0%
!! AAAAAAAAATTACTACATAA+GGG + Chr1:53380009-53380028 None:intergenic 10.0%
!! AAAAATTAATTAAATGAGAA+AGG + Chr1:53383181-53383200 None:intergenic 10.0%
!! AAAATTAATAAAAATGAAGA+TGG + Chr1:53380433-53380452 None:intergenic 10.0%
!! AAATATATTTGTACTTTATT+AGG - Chr1:53381271-53381290 MsG0180002935.01.T01:CDS 10.0%
!! AAATTAATAAAAATGAAGAT+GGG + Chr1:53380432-53380451 None:intergenic 10.0%
!! GATTAATTAGAATAAAAAAT+GGG + Chr1:53377733-53377752 None:intergenic 10.0%
!! TAAAAAAAAATTACTACATA+AGG + Chr1:53380010-53380029 None:intergenic 10.0%
!! TAATTAATTTAATTAACCTT+AGG + Chr1:53377848-53377867 None:intergenic 10.0%
!! TAATTTAAACAAAAATTTGT+AGG + Chr1:53382033-53382052 None:intergenic 10.0%
!! TGATTAATTAGAATAAAAAA+TGG + Chr1:53377734-53377753 None:intergenic 10.0%
!! TTAAACAAATAAAAAAAGAA+TGG + Chr1:53379396-53379415 None:intergenic 10.0%
!! TTATATCTTTATACTATATA+TGG - Chr1:53381756-53381775 MsG0180002935.01.T01:intron 10.0%
!!! AATTTGATTTTATTAGTATA+TGG + Chr1:53378634-53378653 None:intergenic 10.0%
!!! ATTAATATTGTTTTATTTGA+TGG - Chr1:53380076-53380095 MsG0180002935.01.T01:intron 10.0%
!!! ATTATTTGATAATTTGTATT+TGG - Chr1:53377511-53377530 MsG0180002935.01.T01:intron 10.0%
!!! TAGTTTTGAAAATTATAAAT+TGG + Chr1:53383435-53383454 None:intergenic 10.0%
!!! TGTAACAATTTTTTTTTTTT+TGG - Chr1:53378692-53378711 MsG0180002935.01.T01:intron 10.0%
!!! TTGATTGTTTTTTAATTTAT+TGG + Chr1:53382396-53382415 None:intergenic 10.0%
!!! TTTTATATATTTCATTTTAG+GGG - Chr1:53378438-53378457 MsG0180002935.01.T01:intron 10.0%
!!! TTTTATTTAGATATCTATAA+CGG + Chr1:53379207-53379226 None:intergenic 10.0%
!!! TTTTTATATATAATAGTGAA+TGG + Chr1:53379757-53379776 None:intergenic 10.0%
!!! TTTTTTTTCAATTTATTTGT+TGG + Chr1:53380648-53380667 None:intergenic 10.0%
!! AAAAATAAACAGTAATCAAA+TGG + Chr1:53383334-53383353 None:intergenic 15.0%
!! AAAAATGAAATGTTGTATAA+CGG - Chr1:53381870-53381889 MsG0180002935.01.T01:intron 15.0%
!! ACTAAAAAAAGACATAAAAA+TGG - Chr1:53381175-53381194 MsG0180002935.01.T01:CDS 15.0%
!! ATATTCACTTAATCAAATTA+TGG + Chr1:53382771-53382790 None:intergenic 15.0%
!! ATTATTTCAAATTGAATTTG+TGG - Chr1:53380691-53380710 MsG0180002935.01.T01:intron 15.0%
!! TTAATTAACCTTAAATAAGT+TGG + Chr1:53381208-53381227 None:intergenic 15.0%
!!! AAAATAAAAGTACTAGTATA+CGG + Chr1:53376857-53376876 None:intergenic 15.0%
!!! AATGTTTTGTTTGATTTTTA+GGG - Chr1:53378526-53378545 MsG0180002935.01.T01:intron 15.0%
!!! ACTTTTATCACAAAAAAAAA+AGG - Chr1:53381317-53381336 MsG0180002935.01.T01:CDS 15.0%
!!! AGTTTGTATTATTTTATGTA+AGG + Chr1:53381158-53381177 None:intergenic 15.0%
!!! CAACTTATTTATTTTTTTAG+AGG - Chr1:53380969-53380988 MsG0180002935.01.T01:intron 15.0%
!!! CTCTAAAAAAATAAATAAGT+TGG + Chr1:53380971-53380990 None:intergenic 15.0%
!!! TAAAAAATCTTTTGAATCAT+AGG + Chr1:53383248-53383267 None:intergenic 15.0%
!!! TAATTTTTTTTTTTTTGTGG+TGG + Chr1:53382174-53382193 None:intergenic 15.0%
!!! TATTTGCTTTTATACATTTT+AGG - Chr1:53378042-53378061 MsG0180002935.01.T01:intron 15.0%
!!! TGAAGAAAATTTTCAATTAT+TGG - Chr1:53382842-53382861 MsG0180002935.01.T01:CDS 15.0%
!!! TGTATTTAGTATTTTACTTT+TGG - Chr1:53379893-53379912 MsG0180002935.01.T01:CDS 15.0%
!!! TTAAAACCAATATTTCTATA+AGG + Chr1:53379035-53379054 None:intergenic 15.0%
!!! TTTATATATTTCATTTTAGG+GGG - Chr1:53378439-53378458 MsG0180002935.01.T01:intron 15.0%
!!! TTTTCTTCATATAATTTTCA+TGG - Chr1:53383394-53383413 MsG0180002935.01.T01:intron 15.0%
!! AAAAACTACATATCAAACTT+TGG - Chr1:53379152-53379171 MsG0180002935.01.T01:intron 20.0%
!! AAAATATAGTGAACATATAG+AGG + Chr1:53383274-53383293 None:intergenic 20.0%
!! AACCATGAAAAATATCTTAA+AGG + Chr1:53381412-53381431 None:intergenic 20.0%
!! AACTTGGTAAAAAATTTCAA+GGG + Chr1:53380770-53380789 None:intergenic 20.0%
!! ATTTATAACATTGAGTATCA+AGG - Chr1:53381477-53381496 MsG0180002935.01.T01:intron 20.0%
!! ATTTATACCTTTGAATTAGA+TGG + Chr1:53377353-53377372 None:intergenic 20.0%
!! CAAGTGATGTAATAATATTT+AGG - Chr1:53379946-53379965 MsG0180002935.01.T01:CDS 20.0%
!! CATATGAATAATTTGAGTAA+GGG - Chr1:53382634-53382653 MsG0180002935.01.T01:intron 20.0%
!! CATTCAAATAAATTATCAGT+TGG + Chr1:53383060-53383079 None:intergenic 20.0%
!! CATTCATTAAATAATGTATG+TGG - Chr1:53379792-53379811 MsG0180002935.01.T01:intron 20.0%
!! CTTATATACCAATTTATTTC+AGG - Chr1:53378092-53378111 MsG0180002935.01.T01:intron 20.0%
!! TAACTTGGTAAAAAATTTCA+AGG + Chr1:53380771-53380790 None:intergenic 20.0%
!! TAGAATAACAAAGAGTTATA+TGG + Chr1:53383824-53383843 None:intergenic 20.0%
!! TATATATAATAGTGAATGGA+GGG + Chr1:53379753-53379772 None:intergenic 20.0%
!! TGAACTTTGCTAAATAATAA+TGG - Chr1:53383017-53383036 MsG0180002935.01.T01:intron 20.0%
!! TTAAATTCATGTAATCGATT+TGG - Chr1:53382191-53382210 MsG0180002935.01.T01:CDS 20.0%
!! TTATATATAATAGTGAATGG+AGG + Chr1:53379754-53379773 None:intergenic 20.0%
!!! AAAGTTTGATATGTAGTTTT+TGG + Chr1:53379153-53379172 None:intergenic 20.0%
!!! CAATAACAAATTTTAGTGAA+AGG + Chr1:53379581-53379600 None:intergenic 20.0%
!!! CAATGTTTTGTTTGATTTTT+AGG - Chr1:53378525-53378544 MsG0180002935.01.T01:intron 20.0%
!!! CTGTTTTCAGTATTAATTTT+TGG - Chr1:53376719-53376738 MsG0180002935.01.T01:intron 20.0%
!!! CTTTCACTAAAATTTGTTAT+TGG - Chr1:53379579-53379598 MsG0180002935.01.T01:intron 20.0%
!!! TAGTTTTTACACAAAAATAG+AGG + Chr1:53378207-53378226 None:intergenic 20.0%
!!! TATAATGTTTTGCATTTTCT+TGG - Chr1:53380401-53380420 MsG0180002935.01.T01:intron 20.0%
!!! TATTTGTTTTCATAAGAAAC+TGG + Chr1:53376446-53376465 None:intergenic 20.0%
!!! TCAAACAAAACATTGTTTTT+AGG + Chr1:53378520-53378539 None:intergenic 20.0%
!!! TGAATAGTCTTCTTTTTTTT+TGG - Chr1:53383571-53383590 MsG0180002935.01.T01:CDS 20.0%
!!! TGATAATTTGTATTTGGTAT+AGG - Chr1:53377517-53377536 MsG0180002935.01.T01:intron 20.0%
!!! TTCTATAACTTTTAAACGTT+CGG + Chr1:53382516-53382535 None:intergenic 20.0%
!!! TTGGTAATTACTTTAAAATG+TGG - Chr1:53382861-53382880 MsG0180002935.01.T01:CDS 20.0%
!!! TTTCATTTCAGAAGTATATT+CGG + Chr1:53378342-53378361 None:intergenic 20.0%
!!! TTTTCTGTTTAAGATTGTAT+CGG - Chr1:53380452-53380471 MsG0180002935.01.T01:intron 20.0%
! AAAAACTGGTCAAATTGAAA+AGG + Chr1:53383213-53383232 None:intergenic 25.0%
! AAAACTGGTCAAATTGAAAA+GGG + Chr1:53383212-53383231 None:intergenic 25.0%
! AAATTCAAACTCAAACTAGA+AGG + Chr1:53383889-53383908 None:intergenic 25.0%
! AACATAAGCCTGAAATAAAT+TGG + Chr1:53378103-53378122 None:intergenic 25.0%
! AAGTAGTAGTTTATAATGTG+AGG + Chr1:53380881-53380900 None:intergenic 25.0%
! AATATGGATCTCTCAAAAAT+AGG - Chr1:53379983-53380002 MsG0180002935.01.T01:CDS 25.0%
! AATTCAAACTCAAACTAGAA+GGG + Chr1:53383888-53383907 None:intergenic 25.0%
! AATTTGACTAAAACTGTAGT+TGG - Chr1:53379442-53379461 MsG0180002935.01.T01:intron 25.0%
! ACTTGGTAAAAAATTTCAAG+GGG + Chr1:53380769-53380788 None:intergenic 25.0%
! AGTAGTAGTTTATAATGTGA+GGG + Chr1:53380880-53380899 None:intergenic 25.0%
! AGTTATAGAATTTAACCATC+AGG - Chr1:53382526-53382545 MsG0180002935.01.T01:CDS 25.0%
! AGTTCCCAAAGTAAATTTAA+GGG - Chr1:53379465-53379484 MsG0180002935.01.T01:intron 25.0%
! ATAAACGAACAATAGACATT+TGG - Chr1:53382712-53382731 MsG0180002935.01.T01:intron 25.0%
! ATCTTAGGAAAATATGTGTT+TGG + Chr1:53381973-53381992 None:intergenic 25.0%
! ATGTTGTAAAGTACAATAAG+AGG - Chr1:53382365-53382384 MsG0180002935.01.T01:CDS 25.0%
! ATTGCCCTTAAATTTACTTT+GGG + Chr1:53379472-53379491 None:intergenic 25.0%
! ATTTAATTAACCTTAGGATC+TGG + Chr1:53377842-53377861 None:intergenic 25.0%
! ATTTAGTTGAAGAAGACAAA+GGG + Chr1:53377133-53377152 None:intergenic 25.0%
! CAAACTAGAATAAGAAACTT+AGG - Chr1:53383096-53383115 MsG0180002935.01.T01:intron 25.0%
! CAAAGTTCACAAAGAAATTT+AGG + Chr1:53383006-53383025 None:intergenic 25.0%
! CTAATGGTATTCATAGAAAT+TGG + Chr1:53378598-53378617 None:intergenic 25.0%
! GAGAAATACCAACTTATTTA+AGG - Chr1:53381197-53381216 MsG0180002935.01.T01:CDS 25.0%
! GATAAATCTCCAAAACAAAA+GGG - Chr1:53379308-53379327 MsG0180002935.01.T01:intron 25.0%
! GCAAAACATTATAAGTTGTT+GGG + Chr1:53380394-53380413 None:intergenic 25.0%
! GCATATGAATAATTTGAGTA+AGG - Chr1:53382633-53382652 MsG0180002935.01.T01:intron 25.0%
! GGTATAATATATATGTTCCA+TGG + Chr1:53380627-53380646 None:intergenic 25.0%
! GTTATATGTGGAAAATTGTT+TGG - Chr1:53378837-53378856 MsG0180002935.01.T01:intron 25.0%
! TAAACGAACAATAGACATTT+GGG - Chr1:53382713-53382732 MsG0180002935.01.T01:intron 25.0%
! TAAGAAACTTAGGAATCATT+AGG - Chr1:53383106-53383125 MsG0180002935.01.T01:intron 25.0%
! TAATAACAATTCTATGCTCA+TGG - Chr1:53376121-53376140 MsG0180002935.01.T01:CDS 25.0%
! TACAAATCTAGACTTACATT+TGG + Chr1:53381236-53381255 None:intergenic 25.0%
! TACTAGAAAAAGATTAGCAA+AGG - Chr1:53381360-53381379 MsG0180002935.01.T01:CDS 25.0%
! TAGATGAAGATTGTATCAAT+GGG + Chr1:53381565-53381584 None:intergenic 25.0%
! TATTTAGTTGAAGAAGACAA+AGG + Chr1:53377134-53377153 None:intergenic 25.0%
! TCATTCCAAAAGAAATTTGA+TGG + Chr1:53376268-53376287 None:intergenic 25.0%
! TGAATTGGACTTATATGTAT+CGG + Chr1:53382469-53382488 None:intergenic 25.0%
! TGATAAAAAAACACCATCTT+AGG + Chr1:53381988-53382007 None:intergenic 25.0%
! TGATAAATCTCCAAAACAAA+AGG - Chr1:53379307-53379326 MsG0180002935.01.T01:intron 25.0%
! TGCAAAACATTATAAGTTGT+TGG + Chr1:53380395-53380414 None:intergenic 25.0%
! TGGTAAGATATTATTGATGA+TGG - Chr1:53377201-53377220 MsG0180002935.01.T01:intron 25.0%
! TGTTATTGGAATCAGAAAAA+TGG - Chr1:53379593-53379612 MsG0180002935.01.T01:intron 25.0%
! TTAAAAATCTGTATCAAGAC+TGG - Chr1:53378231-53378250 MsG0180002935.01.T01:intron 25.0%
! TTAGATGAAGATTGTATCAA+TGG + Chr1:53381566-53381585 None:intergenic 25.0%
! TTTGCAATATGAATGATGTA+TGG - Chr1:53377756-53377775 MsG0180002935.01.T01:intron 25.0%
!! AAACACATATTTTCCTAAGA+TGG - Chr1:53381972-53381991 MsG0180002935.01.T01:intron 25.0%
!! AAAGCAAATACTACAGTTTT+TGG + Chr1:53378032-53378051 None:intergenic 25.0%
!! AAGATTTTCAGTATAGAGTT+AGG - Chr1:53379534-53379553 MsG0180002935.01.T01:intron 25.0%
!! AAGCAAATACTACAGTTTTT+GGG + Chr1:53378031-53378050 None:intergenic 25.0%
!! ACCAAGTCTTATCTTAATTA+TGG + Chr1:53377185-53377204 None:intergenic 25.0%
!! AGTCAGTTGATTTAAATTAC+TGG - Chr1:53383508-53383527 MsG0180002935.01.T01:intron 25.0%
!! CCAAGTCTTATCTTAATTAT+GGG + Chr1:53377184-53377203 None:intergenic 25.0%
!! GAGCATAGAATTGTTATTAT+TGG + Chr1:53376120-53376139 None:intergenic 25.0%
!! TATGTTATGTCTTCAAGTTA+CGG + Chr1:53381633-53381652 None:intergenic 25.0%
!! TCTGTATCAAGAATTTTGTA+AGG + Chr1:53378671-53378690 None:intergenic 25.0%
!! TTTAGGATATCTAAACAACT+TGG + Chr1:53382989-53383008 None:intergenic 25.0%
!!! ACAAATTTTAGTGAAAGGTA+TGG + Chr1:53379576-53379595 None:intergenic 25.0%
!!! ATAGTCTTCTTTTTTTTTGG+TGG - Chr1:53383574-53383593 MsG0180002935.01.T01:CDS 25.0%
!!! ATCTGTTCTAAATTTTGACT+AGG + Chr1:53378389-53378408 None:intergenic 25.0%
!!! ATTTGACCAGTTTTTAGTTT+TGG - Chr1:53383218-53383237 MsG0180002935.01.T01:intron 25.0%
!!! CTCTCATTTTGATATTAGAA+AGG - Chr1:53381005-53381024 MsG0180002935.01.T01:intron 25.0%
!!! TCAAGCATTTTTTTTGTATC+TGG - Chr1:53376589-53376608 MsG0180002935.01.T01:intron 25.0%
!!! TGTCACAAAATTTTTAGTGT+GGG + Chr1:53379281-53379300 None:intergenic 25.0%
!!! TTCTAGCTAGAATATTTTTG+AGG + Chr1:53378885-53378904 None:intergenic 25.0%
!!! TTGTCACAAAATTTTTAGTG+TGG + Chr1:53379282-53379301 None:intergenic 25.0%
!!! TTTTTGGAACAAATTTTCAG+AGG - Chr1:53378708-53378727 MsG0180002935.01.T01:intron 25.0%
AAAAACACAATCATCCTGTA+AGG + Chr1:53378005-53378024 None:intergenic 30.0%
AAAACACAATCATCCTGTAA+GGG + Chr1:53378004-53378023 None:intergenic 30.0%
AAATCTAGACTTACATTTGG+TGG + Chr1:53381233-53381252 None:intergenic 30.0%
AAATGAGCTTAGGTTATATG+TGG - Chr1:53378825-53378844 MsG0180002935.01.T01:intron 30.0%
AAGGCTAGGTTAATCATTAA+TGG + Chr1:53379016-53379035 None:intergenic 30.0%
AATCTGTTCCTTCAATCATA+TGG - Chr1:53380835-53380854 MsG0180002935.01.T01:intron 30.0%
AGAACTTTACTGAGAAAAGA+AGG - Chr1:53383721-53383740 MsG0180002935.01.T01:intron 30.0%
AGATGGAAATAGAAGAAAAG+TGG - Chr1:53379620-53379639 MsG0180002935.01.T01:intron 30.0%
AGCTAAAAAGCAACAAGTTA+TGG + Chr1:53381665-53381684 None:intergenic 30.0%
ATCTGTTCCTTCAATCATAT+GGG - Chr1:53380836-53380855 MsG0180002935.01.T01:intron 30.0%
ATGAGTGAATGTGGAATTAA+AGG - Chr1:53379504-53379523 MsG0180002935.01.T01:intron 30.0%
ATTATGAGATTGTCAACTCA+AGG + Chr1:53377436-53377455 None:intergenic 30.0%
ATTATGGGAAATGTAACACT+TGG + Chr1:53377169-53377188 None:intergenic 30.0%
CAAAGTAAATTTAAGGGCAA+TGG - Chr1:53379471-53379490 MsG0180002935.01.T01:intron 30.0%
CACTTAATCAAATTATGGAG+TGG + Chr1:53382766-53382785 None:intergenic 30.0%
CATTGCCCTTAAATTTACTT+TGG + Chr1:53379473-53379492 None:intergenic 30.0%
CCAACTTAGTGATTAAGTAA+GGG + Chr1:53380537-53380556 None:intergenic 30.0%
CCCATAATTAAGATAAGACT+TGG - Chr1:53377181-53377200 MsG0180002935.01.T01:intron 30.0%
CCTTACTTAATCACTAAGTT+GGG - Chr1:53380535-53380554 MsG0180002935.01.T01:intron 30.0%
CTAAAAAACTTGCATCTACT+TGG + Chr1:53376094-53376113 None:intergenic 30.0%
CTTGGTAAAAAATTTCAAGG+GGG + Chr1:53380768-53380787 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG + Chr1:53383622-53383641 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - Chr1:53382126-53382145 MsG0180002935.01.T01:intron 30.0%
GAGTTCCCAAAGTAAATTTA+AGG - Chr1:53379464-53379483 MsG0180002935.01.T01:intron 30.0%
GATTCAAGTGCTTATGATTT+AGG - Chr1:53376557-53376576 MsG0180002935.01.T01:intron 30.0%
GGAATATGTGATCAAAATTG+CGG - Chr1:53379173-53379192 MsG0180002935.01.T01:intron 30.0%
GGCATGTCAGAAAAAAAATA+TGG - Chr1:53379967-53379986 MsG0180002935.01.T01:CDS 30.0%
GGTATACCAAAACTAAAAAC+TGG + Chr1:53383227-53383246 None:intergenic 30.0%
GTTATGGACTTATAGTAACT+TGG + Chr1:53380786-53380805 None:intergenic 30.0%
TAGGAAAATATGTGTTTGGT+CGG + Chr1:53381969-53381988 None:intergenic 30.0%
TATACCTTTGAATTAGATGG+TGG + Chr1:53377350-53377369 None:intergenic 30.0%
TATTTGGTATAGGTTAGCAT+GGG - Chr1:53377527-53377546 MsG0180002935.01.T01:intron 30.0%
TCATAGAAATTGGAATTCCT+TGG + Chr1:53378588-53378607 None:intergenic 30.0%
TCATGACATATAACAAACCT+TGG - Chr1:53377018-53377037 MsG0180002935.01.T01:intron 30.0%
TGCATAATATATGCAAGGTT+CGG - Chr1:53382131-53382150 MsG0180002935.01.T01:intron 30.0%
TGCTTATGATTTAGGTGAAT+TGG - Chr1:53376565-53376584 MsG0180002935.01.T01:intron 30.0%
TGGAAATGTTTCGAGAAATT+TGG + Chr1:53379133-53379152 None:intergenic 30.0%
TGTAACTGCAATTTATACCA+TGG - Chr1:53380607-53380626 MsG0180002935.01.T01:intron 30.0%
TTGGTCAAATTCAGTAAGAT+GGG - Chr1:53376738-53376757 MsG0180002935.01.T01:intron 30.0%
TTTAAAGATTCTCTGTCTGA+GGG - Chr1:53376794-53376813 MsG0180002935.01.T01:intron 30.0%
TTTAAGCAATCCTCCTAATA+TGG - Chr1:53380261-53380280 MsG0180002935.01.T01:intron 30.0%
TTTACCTTAATGAGTTCAGA+TGG + Chr1:53378985-53379004 None:intergenic 30.0%
TTTGGTCAAATTCAGTAAGA+TGG - Chr1:53376737-53376756 MsG0180002935.01.T01:intron 30.0%
! ACCAATATTTCTATAAGGCT+AGG + Chr1:53379030-53379049 None:intergenic 30.0%
! CATGACCATCAAATTTCTTT+TGG - Chr1:53376260-53376279 MsG0180002935.01.T01:intron 30.0%
! CTAAAACTCAAACACGTTTT+GGG - Chr1:53381688-53381707 MsG0180002935.01.T01:intron 30.0%
! GATGATGAAGAAGATTTTGA+TGG + Chr1:53376202-53376221 None:intergenic 30.0%
! TTAATTTGAAAACTCACTGC+AGG - Chr1:53383951-53383970 MsG0180002935.01.T01:CDS 30.0%
! TTATAGTCTCTGAAAGAGAT+TGG + Chr1:53380231-53380250 None:intergenic 30.0%
! TTGAGATTCATGTGAGTTTT+TGG + Chr1:53376150-53376169 None:intergenic 30.0%
! TTGTGAATAGTTTGTGATCT+TGG - Chr1:53380725-53380744 MsG0180002935.01.T01:intron 30.0%
!! ACCTAGCCTTATAGAAATAT+TGG - Chr1:53379026-53379045 MsG0180002935.01.T01:intron 30.0%
!! ATCAGAAAAATGGACTAAGA+TGG - Chr1:53379603-53379622 MsG0180002935.01.T01:intron 30.0%
!! TCTAAAACTCAAACACGTTT+TGG - Chr1:53381687-53381706 MsG0180002935.01.T01:intron 30.0%
!! TCTAGAATACCCTTTTGTTT+TGG + Chr1:53379320-53379339 None:intergenic 30.0%
!! TTAGCAAAGGTACCAATATA+AGG - Chr1:53381373-53381392 MsG0180002935.01.T01:CDS 30.0%
!! TTTTAAAGATTCTCTGTCTG+AGG - Chr1:53376793-53376812 MsG0180002935.01.T01:intron 30.0%
!! TTTTACTTTTGGTTGTTGCT+AGG - Chr1:53379904-53379923 MsG0180002935.01.T01:CDS 30.0%
!!! ACTTGTTTTACACGAGTTTA+TGG + Chr1:53379712-53379731 None:intergenic 30.0%
!!! ATCTTGGTTAACTAGTTTTG+TGG - Chr1:53380741-53380760 MsG0180002935.01.T01:intron 30.0%
!!! CAAGTAGATGCAAGTTTTTT+AGG - Chr1:53376092-53376111 MsG0180002935.01.T01:CDS 30.0%
!!! GCATTTTTTTTGTATCTGGA+TGG - Chr1:53376593-53376612 MsG0180002935.01.T01:intron 30.0%
!!! GGCCTTTAAGATATTTTTCA+TGG - Chr1:53381407-53381426 MsG0180002935.01.T01:CDS 30.0%
!!! TTGGGTTGGCTTATTTATTT+TGG - Chr1:53381706-53381725 MsG0180002935.01.T01:intron 30.0%
!!! TTGGTTTTAAATTGCCGTTA+CGG - Chr1:53379045-53379064 MsG0180002935.01.T01:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGCA+GGG + Chr1:53382169-53382188 None:intergenic 30.0%
!!! TTTTTTTTTTTTGTGGTGGC+AGG + Chr1:53382170-53382189 None:intergenic 30.0%
AAAAAGCAGGCTTAGGAAAA+AGG - Chr1:53377967-53377986 MsG0180002935.01.T01:intron 35.0%
AAAACTCACAAGTAGTTGCT+AGG + Chr1:53376317-53376336 None:intergenic 35.0%
AAAAGCAACAAGTTATGGTG+AGG + Chr1:53381660-53381679 None:intergenic 35.0%
AAATAGAAGAAAAGTGGCAC+GGG - Chr1:53379626-53379645 MsG0180002935.01.T01:intron 35.0%
AAGTCAAATTGAGCCTCTTA+CGG - Chr1:53380120-53380139 MsG0180002935.01.T01:intron 35.0%
ACACGAGTTTATGGTCAATT+AGG + Chr1:53379703-53379722 None:intergenic 35.0%
ACCAAATACTTGGTATATGC+GGG - Chr1:53380146-53380165 MsG0180002935.01.T01:intron 35.0%
ACGAGTTTATGGTCAATTAG+GGG + Chr1:53379701-53379720 None:intergenic 35.0%
ACTTGCATGAAAATGAGCTT+AGG - Chr1:53378815-53378834 MsG0180002935.01.T01:intron 35.0%
ATAGAGGATGAAGATGAAGA+TGG + Chr1:53376293-53376312 None:intergenic 35.0%
ATCAAATTATGGAGTGGTTG+TGG + Chr1:53382760-53382779 None:intergenic 35.0%
ATCATAAACACGTGAGACTA+TGG - Chr1:53381525-53381544 MsG0180002935.01.T01:intron 35.0%
ATCCAACAATTGTAGAGCAA+AGG - Chr1:53378493-53378512 MsG0180002935.01.T01:intron 35.0%
ATGTAGTTAGCCATATTAGG+AGG + Chr1:53380274-53380293 None:intergenic 35.0%
CAATATAAGGACAAGTTGCA+CGG - Chr1:53381386-53381405 MsG0180002935.01.T01:CDS 35.0%
CAATGTTTGATGTGGAGTAT+GGG - Chr1:53378734-53378753 MsG0180002935.01.T01:intron 35.0%
CACACTCACTTCATACTATT+TGG - Chr1:53381919-53381938 MsG0180002935.01.T01:intron 35.0%
CACCAAATACTTGGTATATG+CGG - Chr1:53380145-53380164 MsG0180002935.01.T01:intron 35.0%
CACGAGTTTATGGTCAATTA+GGG + Chr1:53379702-53379721 None:intergenic 35.0%
CATAATATATGCAAGGTTCG+GGG - Chr1:53382133-53382152 MsG0180002935.01.T01:intron 35.0%
CCCAACTTAGTGATTAAGTA+AGG + Chr1:53380538-53380557 None:intergenic 35.0%
CCCTTACTTAATCACTAAGT+TGG - Chr1:53380534-53380553 MsG0180002935.01.T01:intron 35.0%
CCTAATATGGCTAACTACAT+GGG - Chr1:53380274-53380293 MsG0180002935.01.T01:intron 35.0%
CTACAATTGTTGGATCATGT+TGG + Chr1:53378488-53378507 None:intergenic 35.0%
CTCTATCTCTCATTGTCTAT+GGG - Chr1:53379650-53379669 MsG0180002935.01.T01:intron 35.0%
CTTTGATCTTGAACACTAGA+GGG + Chr1:53376635-53376654 None:intergenic 35.0%
GAAATAGAAGAAAAGTGGCA+CGG - Chr1:53379625-53379644 MsG0180002935.01.T01:intron 35.0%
GATGGGAAAATGTTAAGAGT+TGG + Chr1:53377305-53377324 None:intergenic 35.0%
GCATAATATATGCAAGGTTC+GGG - Chr1:53382132-53382151 MsG0180002935.01.T01:intron 35.0%
GCATATTGAAAAAGTTGCAC+AGG + Chr1:53383365-53383384 None:intergenic 35.0%
GGAGTCACATTATAAAATCC+AGG + Chr1:53380950-53380969 None:intergenic 35.0%
GGTTCAGTAAAATGCTGTTA+TGG + Chr1:53382012-53382031 None:intergenic 35.0%
GTAGTTTATAATGTGAGGGT+TGG + Chr1:53380876-53380895 None:intergenic 35.0%
GTATTTGGTATAGGTTAGCA+TGG - Chr1:53377526-53377545 MsG0180002935.01.T01:intron 35.0%
TAGTTACGTCTCGATAGAAT+CGG - Chr1:53382570-53382589 MsG0180002935.01.T01:CDS 35.0%
TATAATGTACCTACCTTGAC+AGG + Chr1:53377656-53377675 None:intergenic 35.0%
TATGAAGTGAGTGTGTGAAT+TGG + Chr1:53381914-53381933 None:intergenic 35.0%
TCAAATTATGGAGTGGTTGT+GGG + Chr1:53382759-53382778 None:intergenic 35.0%
TCCACATTCCAAAAACAAGA+TGG + Chr1:53378918-53378937 None:intergenic 35.0%
TCCTAATATGGCTAACTACA+TGG - Chr1:53380273-53380292 MsG0180002935.01.T01:intron 35.0%
TCTATGAATACCATTAGCTC+AGG - Chr1:53378601-53378620 MsG0180002935.01.T01:intron 35.0%
TCTCACAAAACTTTCAAGAG+TGG + Chr1:53380329-53380348 None:intergenic 35.0%
TCTCTATCTCTCATTGTCTA+TGG - Chr1:53379649-53379668 MsG0180002935.01.T01:intron 35.0%
TCTTTGATCTTGAACACTAG+AGG + Chr1:53376636-53376655 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG + Chr1:53383617-53383636 None:intergenic 35.0%
TTAACCTCTCCAATAACAAG+TGG - Chr1:53377551-53377570 MsG0180002935.01.T01:intron 35.0%
TTACATAGAATCTACGAACC+TGG - Chr1:53380929-53380948 MsG0180002935.01.T01:intron 35.0%
TTCATAAGAAACTGGCATGT+TGG + Chr1:53376438-53376457 None:intergenic 35.0%
TTCCTTCAATCATATGGGTA+GGG - Chr1:53380841-53380860 MsG0180002935.01.T01:intron 35.0%
TTTGATGTCATGAGTGAATG+TGG - Chr1:53379495-53379514 MsG0180002935.01.T01:intron 35.0%
! ATGCATACCACCTTTTTCTA+AGG + Chr1:53377055-53377074 None:intergenic 35.0%
! CAACTTGGTCAATTTTGCTA+CGG + Chr1:53382974-53382993 None:intergenic 35.0%
! GACTAAAGTGTTACCTTTGT+TGG - Chr1:53382418-53382437 MsG0180002935.01.T01:intron 35.0%
! TAGTGAAAGGTATGGCTTTA+TGG + Chr1:53379568-53379587 None:intergenic 35.0%
!! AAAATGTTAAGAGTTGGTGG+TGG + Chr1:53377299-53377318 None:intergenic 35.0%
!! ACTTATATGTATCGGTTGTC+AGG + Chr1:53382461-53382480 None:intergenic 35.0%
!! ACTTCAAGTTCTGAACATGA+AGG - Chr1:53377806-53377825 MsG0180002935.01.T01:intron 35.0%
!! AGTGAAAGGTATGGCTTTAT+GGG + Chr1:53379567-53379586 None:intergenic 35.0%
!! CTTATATGTATCGGTTGTCA+GGG + Chr1:53382460-53382479 None:intergenic 35.0%
!! CTTGTGGTTTGTTAAGTCAT+TGG + Chr1:53381945-53381964 None:intergenic 35.0%
!! GATGTTGATTCTGTTGTTGT+TGG + Chr1:53376226-53376245 None:intergenic 35.0%
!! TCTTGAAAGTTTTGTGAGAC+AGG - Chr1:53380330-53380349 MsG0180002935.01.T01:intron 35.0%
!!! GATGTGTTCCATCTTGTTTT+TGG - Chr1:53378907-53378926 MsG0180002935.01.T01:intron 35.0%
!!! GATTTTTAGGGCGTGTTAAT+GGG - Chr1:53378538-53378557 MsG0180002935.01.T01:intron 35.0%
!!! GTCTTCTTTTTTTTTGGTGG+TGG - Chr1:53383577-53383596 MsG0180002935.01.T01:CDS 35.0%
!!! TCCATCTTGTTTTTGGAATG+TGG - Chr1:53378914-53378933 MsG0180002935.01.T01:intron 35.0%
!!! TGATTTTTAGGGCGTGTTAA+TGG - Chr1:53378537-53378556 MsG0180002935.01.T01:intron 35.0%
!!! TTTTTGGAGCCACTTGTTAT+TGG + Chr1:53377563-53377582 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGCAG+GGG + Chr1:53382168-53382187 None:intergenic 35.0%
AAGATATGCACAGCTAGAGA+GGG - Chr1:53381059-53381078 MsG0180002935.01.T01:intron 40.0%
AAGTCCATAACTGATCTCGT+GGG - Chr1:53380795-53380814 MsG0180002935.01.T01:intron 40.0%
ACAGAGAACTCATCATCATC+AGG - Chr1:53377266-53377285 MsG0180002935.01.T01:intron 40.0%
ACCAAAAACACCAGATCCTA+AGG - Chr1:53377829-53377848 MsG0180002935.01.T01:intron 40.0%
ACCACCACCATCTAATTCAA+AGG - Chr1:53377343-53377362 MsG0180002935.01.T01:intron 40.0%
ACCATGACATCACACAGATA+TGG + Chr1:53381605-53381624 None:intergenic 40.0%
ACCCGCATATACCAAGTATT+TGG + Chr1:53380150-53380169 None:intergenic 40.0%
ACTTACAGACAAGTGTAGCT+CGG + Chr1:53382892-53382911 None:intergenic 40.0%
AGTTACGTCTCGATAGAATC+GGG - Chr1:53382571-53382590 MsG0180002935.01.T01:CDS 40.0%
ATAAGTCCAATTCATGCGAC+TGG - Chr1:53382475-53382494 MsG0180002935.01.T01:intron 40.0%
ATGACCTCCTTAGAAAAAGG+TGG - Chr1:53377045-53377064 MsG0180002935.01.T01:intron 40.0%
ATGCATTCCTCACTCTCATA+AGG - Chr1:53380903-53380922 MsG0180002935.01.T01:intron 40.0%
CAGACCATCTGAACTCATTA+AGG - Chr1:53378978-53378997 MsG0180002935.01.T01:intron 40.0%
CCATGACATCACACAGATAT+GGG + Chr1:53381604-53381623 None:intergenic 40.0%
CCCATGTAGTTAGCCATATT+AGG + Chr1:53380277-53380296 None:intergenic 40.0%
CGAGTTTATGGTCAATTAGG+GGG + Chr1:53379700-53379719 None:intergenic 40.0%
CGTGCAACTTGTCCTTATAT+TGG + Chr1:53381388-53381407 None:intergenic 40.0%
GAGACTATGGTAGATTAGTG+TGG - Chr1:53381538-53381557 MsG0180002935.01.T01:intron 40.0%
GCAATGTTTGATGTGGAGTA+TGG - Chr1:53378733-53378752 MsG0180002935.01.T01:intron 40.0%
GCAGAAAGAGAATAATCGCA+AGG - Chr1:53377778-53377797 MsG0180002935.01.T01:intron 40.0%
GGGAAAATGTTAAGAGTTGG+TGG + Chr1:53377302-53377321 None:intergenic 40.0%
GGTCAATTAGGGGGAAAATT+GGG + Chr1:53379691-53379710 None:intergenic 40.0%
GTAACAACCTTATGAGAGTG+AGG + Chr1:53380913-53380932 None:intergenic 40.0%
GTCATGACCTCCTTAGAAAA+AGG - Chr1:53377042-53377061 MsG0180002935.01.T01:intron 40.0%
GTCCTTTGCTCTACAATTGT+TGG + Chr1:53378498-53378517 None:intergenic 40.0%
GTTCCTTCAATCATATGGGT+AGG - Chr1:53380840-53380859 MsG0180002935.01.T01:intron 40.0%
GTTGCAACAATCAACACAAG+AGG - Chr1:53380168-53380187 MsG0180002935.01.T01:intron 40.0%
TAAGTCCATAACTGATCTCG+TGG - Chr1:53380794-53380813 MsG0180002935.01.T01:intron 40.0%
TATAATGTGAGGGTTGGAGT+TGG + Chr1:53380870-53380889 None:intergenic 40.0%
TGATGGTCATGCATATGATG+AGG + Chr1:53376251-53376270 None:intergenic 40.0%
TGGAAAGATACCTGAGCTAA+TGG + Chr1:53378614-53378633 None:intergenic 40.0%
TGGTCAATTAGGGGGAAAAT+TGG + Chr1:53379692-53379711 None:intergenic 40.0%
TTAAATTGCCGTTACGGTCA+GGG - Chr1:53379051-53379070 MsG0180002935.01.T01:intron 40.0%
TTAGGGGGAAAATTGGGTAT+TGG + Chr1:53379685-53379704 None:intergenic 40.0%
TTCAGCAGCTAGAAACAAGT+AGG - Chr1:53378121-53378140 MsG0180002935.01.T01:intron 40.0%
TTTAAATTGCCGTTACGGTC+AGG - Chr1:53379050-53379069 MsG0180002935.01.T01:intron 40.0%
! AAGACTTGCTCAGAATAGAG+AGG - Chr1:53377937-53377956 MsG0180002935.01.T01:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+TGG + Chr1:53377833-53377852 None:intergenic 40.0%
! ACCTTTGAATTAGATGGTGG+TGG + Chr1:53377347-53377366 None:intergenic 40.0%
! ATTTGGACCCCAACATTTTG+AGG + Chr1:53379116-53379135 None:intergenic 40.0%
! CAGAAGGGTTTTCATTTCGT+TGG + Chr1:53377616-53377635 None:intergenic 40.0%
!! AACTCAAACACGTTTTGGGT+TGG - Chr1:53381692-53381711 MsG0180002935.01.T01:intron 40.0%
!! CATACCACCTTTTTCTAAGG+AGG + Chr1:53377052-53377071 None:intergenic 40.0%
!! CTACATGCATTGGTTGAGAT+GGG + Chr1:53377322-53377341 None:intergenic 40.0%
!!! CTGTCTGAGGGTTTGTTTTT+TGG - Chr1:53376806-53376825 MsG0180002935.01.T01:intron 40.0%
!!! TCTTTTTTTTTGGTGGTGGC+CGG - Chr1:53383581-53383600 MsG0180002935.01.T01:CDS 40.0%
AAAACCATCTCAACCGTCCA+TGG - Chr1:53377580-53377599 MsG0180002935.01.T01:intron 45.0%
ACATGAAGCAACGTTCAGCT+GGG + Chr1:53378945-53378964 None:intergenic 45.0%
ACGTAACTAACTCTCGTTGG+AGG + Chr1:53382559-53382578 None:intergenic 45.0%
AGAGGCTGCAATGTTTGATG+TGG - Chr1:53378726-53378745 MsG0180002935.01.T01:intron 45.0%
AGATATGCACAGCTAGAGAG+GGG - Chr1:53381060-53381079 MsG0180002935.01.T01:intron 45.0%
AGTCCATAACTGATCTCGTG+GGG - Chr1:53380796-53380815 MsG0180002935.01.T01:intron 45.0%
ATCAACACAAGAGGCAGAAG+AGG - Chr1:53380177-53380196 MsG0180002935.01.T01:intron 45.0%
ATTATGGAGTGGTTGTGGGT+TGG + Chr1:53382755-53382774 None:intergenic 45.0%
CAAGATATGCACAGCTAGAG+AGG - Chr1:53381058-53381077 MsG0180002935.01.T01:intron 45.0%
CAAGTAGTTGCTAGGCATAG+AGG + Chr1:53376309-53376328 None:intergenic 45.0%
CAGCAAGAAAAAGCAGGCTT+AGG - Chr1:53377960-53377979 MsG0180002935.01.T01:intron 45.0%
CCACTAAAACCTGTCAAGGT+AGG - Chr1:53377644-53377663 MsG0180002935.01.T01:intron 45.0%
CCCATATCTGTGTGATGTCA+TGG - Chr1:53381601-53381620 MsG0180002935.01.T01:CDS 45.0%
CGTAACTAACTCTCGTTGGA+GGG + Chr1:53382558-53382577 None:intergenic 45.0%
CTTAAGGGTAAGGCCAACAA+AGG + Chr1:53382434-53382453 None:intergenic 45.0%
GAACGTTGCTTCATGTGGAT+TGG - Chr1:53378949-53378968 MsG0180002935.01.T01:intron 45.0%
GAGACGTAACTAACTCTCGT+TGG + Chr1:53382562-53382581 None:intergenic 45.0%
GATGCAGACGATGAACTGTT+TGG + Chr1:53383993-53384012 None:intergenic 45.0%
GGCTAACTACATGGGACAAA+TGG - Chr1:53380282-53380301 MsG0180002935.01.T01:intron 45.0%
GTCCCTACCCATATGATTGA+AGG + Chr1:53380846-53380865 None:intergenic 45.0%
GTTACGTCTCGATAGAATCG+GGG - Chr1:53382572-53382591 MsG0180002935.01.T01:CDS 45.0%
TATGTGTTTGGTCGGTCTTG+TGG + Chr1:53381961-53381980 None:intergenic 45.0%
TCGTCAAGCTGCAAGATGTT+TGG - Chr1:53384026-53384045 MsG0180002935.01.T01:CDS 45.0%
TCTCGATAGAATCGGGGATT+AGG - Chr1:53382578-53382597 MsG0180002935.01.T01:CDS 45.0%
TCTGAACCAGTCGCATGAAT+TGG + Chr1:53382484-53382503 None:intergenic 45.0%
TGCACCACTAAAACCTGTCA+AGG - Chr1:53377640-53377659 MsG0180002935.01.T01:intron 45.0%
TGTTTGATGTGGAGTATGGG+AGG - Chr1:53378737-53378756 MsG0180002935.01.T01:intron 45.0%
! AAGAGTGGAGAGCTTGTTCA+TGG + Chr1:53380314-53380333 None:intergenic 45.0%
! AATCGAGGAGGGAATTTTGG+GGG - Chr1:53382601-53382620 MsG0180002935.01.T01:CDS 45.0%
! AGGAATCGAGGAGGGAATTT+TGG - Chr1:53382598-53382617 MsG0180002935.01.T01:CDS 45.0%
! CTTACGGAGCACCAAATACT+TGG - Chr1:53380136-53380155 MsG0180002935.01.T01:intron 45.0%
! CTTGGTCAATTTTGCTACGG+TGG + Chr1:53382971-53382990 None:intergenic 45.0%
! GAATCGAGGAGGGAATTTTG+GGG - Chr1:53382600-53382619 MsG0180002935.01.T01:CDS 45.0%
! GGAATCGAGGAGGGAATTTT+GGG - Chr1:53382599-53382618 MsG0180002935.01.T01:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - Chr1:53382104-53382123 MsG0180002935.01.T01:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + Chr1:53382123-53382104 None:intergenic 45.0%
!! AGTATTTGGTGCTCCGTAAG+AGG + Chr1:53380136-53380155 None:intergenic 45.0%
!! CCTACCTTGACAGGTTTTAG+TGG + Chr1:53377647-53377666 None:intergenic 45.0%
!! GCTACATGCATTGGTTGAGA+TGG + Chr1:53377323-53377342 None:intergenic 45.0%
!! TTCGAGCATTGAGTTCTCTC+TGG - Chr1:53384076-53384095 MsG0180002935.01.T01:CDS 45.0%
!! TTGACAGGTTTTAGTGGTGC+AGG + Chr1:53377641-53377660 None:intergenic 45.0%
!! TTGTTGGCCTTACCCTTAAG+CGG - Chr1:53382434-53382453 MsG0180002935.01.T01:intron 45.0%
!!! GGACGGTTGAGATGGTTTTT+TGG + Chr1:53377579-53377598 None:intergenic 45.0%
!!! TTTTAGGGCGTGTTAATGGG+AGG - Chr1:53378541-53378560 MsG0180002935.01.T01:intron 45.0%
!! AAAATTAATAAAATCAAAAT+TGG + Chr1:53376975-53376994 None:intergenic 5.0%
!! TTAAAATGATAAAATAAAAT+TGG + Chr1:53376470-53376489 None:intergenic 5.0%
!!! ATTTAATTTTTTTTTTTTTG+TGG + Chr1:53382177-53382196 None:intergenic 5.0%
!!! ATTTTTATATATTTCATTTT+AGG - Chr1:53378436-53378455 MsG0180002935.01.T01:intron 5.0%
!!! CTTAAAATTTAAAATATAAA+TGG + Chr1:53381094-53381113 None:intergenic 5.0%
!!! TAATAAAATCAAATTTTTTT+TGG - Chr1:53378639-53378658 MsG0180002935.01.T01:intron 5.0%
!!! TATAATTTTACAAAATATTA+AGG - Chr1:53380571-53380590 MsG0180002935.01.T01:intron 5.0%
!!! TTTTTATATATTTCATTTTA+GGG - Chr1:53378437-53378456 MsG0180002935.01.T01:intron 5.0%
AACTCCATGGACGGTTGAGA+TGG + Chr1:53377587-53377606 None:intergenic 50.0%
AGCGTGCTAGAGCTCAAGTA+AGG - Chr1:53378175-53378194 MsG0180002935.01.T01:intron 50.0%
ATCTCAACCGTCCATGGAGT+TGG - Chr1:53377586-53377605 MsG0180002935.01.T01:intron 50.0%
CACATGAAGCAACGTTCAGC+TGG + Chr1:53378946-53378965 None:intergenic 50.0%
CACTGCAGGCAGATAATCTG+AGG - Chr1:53383965-53383984 MsG0180002935.01.T01:CDS 50.0%
CAGACAAGTGTAGCTCGGTA+TGG + Chr1:53382887-53382906 None:intergenic 50.0%
CAGCTGAACGTTGCTTCATG+TGG - Chr1:53378944-53378963 MsG0180002935.01.T01:intron 50.0%
CATGAAGCAACGTTCAGCTG+GGG + Chr1:53378944-53378963 None:intergenic 50.0%
CGACTCTGCAGCAGATTGTA+CGG + Chr1:53378281-53378300 None:intergenic 50.0%
CTAACTCTCGTTGGAGGGTT+AGG + Chr1:53382553-53382572 None:intergenic 50.0%
CTAAGGAGGTCATGACACCA+AGG + Chr1:53377038-53377057 None:intergenic 50.0%
GAATCGGGGATTAGGAATCG+AGG - Chr1:53382586-53382605 MsG0180002935.01.T01:CDS 50.0%
GAGAGGCAGCAAGAAAAAGC+AGG - Chr1:53377954-53377973 MsG0180002935.01.T01:intron 50.0%
GATCCCCACGAGATCAGTTA+TGG + Chr1:53380802-53380821 None:intergenic 50.0%
GGTGCAGTGAATTCCCTTAC+AGG - Chr1:53377988-53378007 MsG0180002935.01.T01:intron 50.0%
GTGCAGTCACCACAGAGAAT+CGG + Chr1:53378259-53378278 None:intergenic 50.0%
GTTGAGTGCATCAAGCCCTT+GGG + Chr1:53380209-53380228 None:intergenic 50.0%
TAACTGATCTCGTGGGGATC+AGG - Chr1:53380802-53380821 MsG0180002935.01.T01:intron 50.0%
TTAGTGGTGCAGGTGCAGAA+GGG + Chr1:53377631-53377650 None:intergenic 50.0%
TTGATGTGGAGTATGGGAGG+TGG - Chr1:53378740-53378759 MsG0180002935.01.T01:intron 50.0%
TTTAGTGGTGCAGGTGCAGA+AGG + Chr1:53377632-53377651 None:intergenic 50.0%
! TGGTTTGCCAACTCCATGGA+CGG + Chr1:53377596-53377615 None:intergenic 50.0%
!! AATGGGAGGAGGTGCACTTT+TGG - Chr1:53378555-53378574 MsG0180002935.01.T01:intron 50.0%
!! AGACTGGTACCGATTCTCTG+TGG - Chr1:53378247-53378266 MsG0180002935.01.T01:intron 50.0%
!! ATGGGAGGAGGTGCACTTTT+GGG - Chr1:53378556-53378575 MsG0180002935.01.T01:intron 50.0%
!! CAGAAGAGGCACTTTCCCAA+GGG - Chr1:53380191-53380210 MsG0180002935.01.T01:intron 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - Chr1:53378952-53378971 MsG0180002935.01.T01:intron 50.0%
!! GGAGCCACTTGTTATTGGAG+AGG + Chr1:53377558-53377577 None:intergenic 50.0%
!! TCGTTGGTTTGCCAACTCCA+TGG + Chr1:53377600-53377619 None:intergenic 50.0%
ATTGCCGTTACGGTCAGGGT+CGG - Chr1:53379055-53379074 MsG0180002935.01.T01:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG - Chr1:53383646-53383665 MsG0180002935.01.T01:intron 55.0%
CCAACTGAGCTAAGCTCACG+AGG + Chr1:53383665-53383646 None:intergenic 55.0%
CCCAGGGCCTCAAAATGTTG+GGG - Chr1:53379106-53379125 MsG0180002935.01.T01:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - Chr1:53382099-53382118 MsG0180002935.01.T01:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + Chr1:53382118-53382099 None:intergenic 55.0%
CGGGGATTAGGAATCGAGGA+GGG - Chr1:53382590-53382609 MsG0180002935.01.T01:CDS 55.0%
CTGAGCTAAGCTCACGAGGA+CGG - Chr1:53383650-53383669 MsG0180002935.01.T01:intron 55.0%
GCACACCTTGCACACCCATT+GGG + Chr1:53379081-53379100 None:intergenic 55.0%
GCCCAGGGCCTCAAAATGTT+GGG - Chr1:53379105-53379124 MsG0180002935.01.T01:intron 55.0%
GGAGTATGGGAGGTGGTTAG+AGG - Chr1:53378747-53378766 MsG0180002935.01.T01:intron 55.0%
GGTTGAGTGCATCAAGCCCT+TGG + Chr1:53380210-53380229 None:intergenic 55.0%
GTTGGAGGGTTAGGTCCTGA+TGG + Chr1:53382544-53382563 None:intergenic 55.0%
TAGGGCGTGTTAATGGGAGG+AGG - Chr1:53378544-53378563 MsG0180002935.01.T01:intron 55.0%
TCGGGGATTAGGAATCGAGG+AGG - Chr1:53382589-53382608 MsG0180002935.01.T01:CDS 55.0%
TGATCTCGTGGGGATCAGGT+AGG - Chr1:53380806-53380825 MsG0180002935.01.T01:intron 55.0%
!! GCACTTTTGGGAGGAGACCA+AGG - Chr1:53378568-53378587 MsG0180002935.01.T01:intron 55.0%
!! GCAGAAGAGGCACTTTCCCA+AGG - Chr1:53380190-53380209 MsG0180002935.01.T01:intron 55.0%
!! GGTGGTGGTGCTACATGCAT+TGG + Chr1:53377332-53377351 None:intergenic 55.0%
!! GGTGGTTAGAGGAGCATCAC+AGG - Chr1:53378758-53378777 MsG0180002935.01.T01:intron 55.0%
!!! ACCCCAACATTTTGAGGCCC+TGG + Chr1:53379110-53379129 None:intergenic 55.0%
!!! CAACATTTTGAGGCCCTGGG+CGG + Chr1:53379106-53379125 None:intergenic 55.0%
!!! CCCCAACATTTTGAGGCCCT+GGG + Chr1:53379109-53379128 None:intergenic 55.0%
AAGGTCCGGTGTTCGAACGC+CGG + Chr1:53383603-53383622 None:intergenic 60.0%
CGCCCAGGGCCTCAAAATGT+TGG - Chr1:53379104-53379123 MsG0180002935.01.T01:intron 60.0%
CGGTTGTCAGGGCCGCTTAA+GGG + Chr1:53382449-53382468 None:intergenic 60.0%
GGCACACCTTGCACACCCAT+TGG + Chr1:53379082-53379101 None:intergenic 60.0%
GTCAGGGCCGCTTAAGGGTA+AGG + Chr1:53382444-53382463 None:intergenic 60.0%
TCGGTTGTCAGGGCCGCTTA+AGG + Chr1:53382450-53382469 None:intergenic 60.0%
!! GGAGGAGGTGCACTTTTGGG+AGG - Chr1:53378559-53378578 MsG0180002935.01.T01:intron 60.0%
ACGGTCAGGGTCGGCCCAAT+GGG - Chr1:53379064-53379083 MsG0180002935.01.T01:intron 65.0%
GTCGGCCCAATGGGTGTGCA+AGG - Chr1:53379073-53379092 MsG0180002935.01.T01:intron 65.0%
TACGGTCAGGGTCGGCCCAA+TGG - Chr1:53379063-53379082 MsG0180002935.01.T01:intron 65.0%
TGGGCCGACCCTGACCGTAA+CGG + Chr1:53379062-53379081 None:intergenic 65.0%
!!! CATTTTGAGGCCCTGGGCGG+TGG + Chr1:53379103-53379122 None:intergenic 65.0%
GCAAGGTGTGCCACCGCCCA+GGG - Chr1:53379090-53379109 MsG0180002935.01.T01:intron 70.0%
GGTGGCCGGCGTTCGAACAC+CGG - Chr1:53383595-53383614 MsG0180002935.01.T01:CDS 70.0%
TGCAAGGTGTGCCACCGCCC+AGG - Chr1:53379089-53379108 MsG0180002935.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 53376050 53384122 53376050 ID=MsG0180002935.01;Name=MsG0180002935.01
Chr1 mRNA 53376050 53384122 53376050 ID=MsG0180002935.01.T01;Parent=MsG0180002935.01;Name=MsG0180002935.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|0.9|0.90|11|0|515
Chr1 exon 53383845 53384122 53383845 ID=MsG0180002935.01.T01:exon:47663;Parent=MsG0180002935.01.T01
Chr1 exon 53383516 53383622 53383516 ID=MsG0180002935.01.T01:exon:47662;Parent=MsG0180002935.01.T01
Chr1 exon 53382808 53382902 53382808 ID=MsG0180002935.01.T01:exon:47661;Parent=MsG0180002935.01.T01
Chr1 exon 53382511 53382633 53382511 ID=MsG0180002935.01.T01:exon:47660;Parent=MsG0180002935.01.T01
Chr1 exon 53382322 53382390 53382322 ID=MsG0180002935.01.T01:exon:47659;Parent=MsG0180002935.01.T01
Chr1 exon 53382184 53382243 53382184 ID=MsG0180002935.01.T01:exon:47658;Parent=MsG0180002935.01.T01
Chr1 exon 53381981 53382058 53381981 ID=MsG0180002935.01.T01:exon:47657;Parent=MsG0180002935.01.T01
Chr1 exon 53381550 53381625 53381550 ID=MsG0180002935.01.T01:exon:47656;Parent=MsG0180002935.01.T01
Chr1 exon 53381173 53381444 53381173 ID=MsG0180002935.01.T01:exon:47655;Parent=MsG0180002935.01.T01
Chr1 exon 53379821 53380060 53379821 ID=MsG0180002935.01.T01:exon:47654;Parent=MsG0180002935.01.T01
Chr1 exon 53376050 53376199 53376050 ID=MsG0180002935.01.T01:exon:47653;Parent=MsG0180002935.01.T01
Chr1 CDS 53383845 53384122 53383845 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53383516 53383622 53383516 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53382808 53382902 53382808 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53382511 53382633 53382511 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53382322 53382390 53382322 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53382184 53382243 53382184 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53381981 53382058 53381981 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53381550 53381625 53381550 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53381173 53381444 53381173 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53379821 53380060 53379821 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Chr1 CDS 53376050 53376199 53376050 ID=MsG0180002935.01.T01:cds;Parent=MsG0180002935.01.T01
Gene Sequence

>MsG0180002935.01.T01

ATGGGGTTTTCTTTGGCTTTTGAAGAAGCTGAACAACAAGACCAAGTAGATGCAAGTTTTTTAGGTACCAATAATAACAATTCTATGCTCATGGCTTCCAAAAACTCACATGAATCTCAACATGAATCTCTTCAACAACAACAACAAAACCATCAAAATCTTCTTCATCATCACCAACAACAACAGAATCAACATCATCCTCATCATATGCATGACCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATGCCTAGCAACTACTTAAGCAAAGATTCAAGTGCTTATGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTGGATGGACAAGCACAAGCTGATCCCTCTAGTGTTCAAGATCAAAGACAGAACTCATCATCATCAGGAATGAAGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTAGCACCACCACCATCTAATTCAAAGGTTAGCATGGGATTAACCTCTCCAATAACAAGTGGCTCCAAAAAACCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAAACCCTTCTGCACCTGCACCACTAAAACCTGTCAAGAAAGAGAATAATCGCAAGGCTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGAAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTACAGCGTGCTAGAGCTCAAGGCGTGTTAATGGGAGGAGGTGCACTTTTGGGAGGAGACCAAGGAATTCCAATTTCTATGAATACCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAGTATGGGAGGTGGTTAGAGGAGCATCACAGGCTAGTGTGTGAGCTAAGAGCAGCAGTAGATGAACACTTGCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAACCTCAAAAATATTCTAGCTAGAACAGATGTGTTCCATCTTGTTTTTGGAATGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGATAATTGTAAGTCAAATTGAGCCTCTTACGGAGCACCAAATACTTGGTATATGCGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCACTTTCCCAAGGGCTTGATGCACTCAACCAATCTCTTTCAGAGACTATAACATCAGACTCTTTAAGCAATCCTCCTAATATGGCTAACTACATGGGACAAATGGCTCTTGCCATGAACAAGCTCTCCACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAGTTCATCGTCTGCATCAGTTGTTAACAGTTCGTCAAGCTGCAAGATGTTTGGTTGCAATGTCTGAGTATTTTCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGTCCTCGCCAAGAATAG

Protein sequence

>MsG0180002935.01.T01

MGFSLAFEEAEQQDQVDASFLGTNNNNSMLMASKNSHESQHESLQQQQQNHQNLLHHHQQQQNQHHPHHMHDHQISFGMMPSSSSSSMPSNYLSKDSSAYDLGELDQAFFLYLDGQAQADPSSVQDQRQNSSSSGMKPPPTLNIFPSQPMHVAPPPSNSKVSMGLTSPITSGSKKPSQPSMELANQRNENPSAPAPLKPVKKENNRKATTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGVLMGGGALLGGDQGIPISMNTISSEAAMFDVEYGRWLEEHHRLVCELRAAVDEHLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSNPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTVHRLHQLLTVRQAARCLVAMSEYFHRLRALSSLWLTRPRQE*