AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018660.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018660.01.T01 MTR_4g016590 81.462 561 31 5 404 899 606 1158 0.0 894
MsG0480018660.01.T01 MTR_4g016590 79.321 324 29 6 1 288 1 322 3.50e-161 502
MsG0480018660.01.T01 MTR_4g016590 99.206 126 1 0 291 416 395 520 8.34e-73 261
MsG0480018660.01.T01 MTR_6g072590 57.732 97 36 1 722 818 1177 1268 1.69e-25 114
MsG0480018660.01.T01 MTR_6g074610 45.139 144 46 2 756 899 9 119 2.27e-23 102
MsG0480018660.01.T01 MTR_6g072640 71.429 63 13 1 828 890 3 60 6.97e-22 90.9
MsG0480018660.01.T01 MTR_6g074790 71.739 46 9 1 346 391 17 58 1.00e-12 63.9
MsG0480018660.01.T01 MTR_6g074780 83.784 37 6 0 764 800 975 1011 3.31e-11 67.8
MsG0480018660.01.T01 MTR_6g074160 84.848 33 5 0 785 817 78 110 7.34e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018660.01.T01 AT3G17740 47.028 774 236 17 290 898 384 1148 0.0 637
MsG0480018660.01.T01 AT3G17740 34.323 303 153 7 24 288 18 312 6.67e-33 138
MsG0480018660.01.T01 AT3G17712 36.433 785 282 20 24 605 49 819 5.05e-124 396
MsG0480018660.01.T01 AT3G17712 40.084 479 189 10 24 416 18 484 1.19e-86 293
MsG0480018660.01.T01 AT3G17712 51.240 121 53 3 454 570 611 729 1.88e-26 116
MsG0480018660.01.T01 AT3G17712 67.692 130 35 2 290 416 384 509 4.35e-47 181
MsG0480018660.01.T01 AT3G17712 34.323 303 153 7 24 288 18 312 3.51e-33 138
MsG0480018660.01.T01 AT3G17712 51.240 121 53 3 454 570 636 754 1.92e-26 116

Find 17 sgRNAs with CRISPR-Local

Find 600 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAATTAATCTTTATCTT+TGG 0.297444 4:+8176607 MsG0480018659.01.T01:three_prime_UTR
AAACTGAACTCTGTTCTTAC+TGG 0.335846 4:+8176130 MsG0480018659.01.T01:three_prime_UTR
ACATCAGTTCACATCATATC+AGG 0.396305 4:-8176284 None:intergenic
ACATTCAAATACACTATCTA+AGG 0.419755 4:-8176468 None:intergenic
GTAGAAGTACTTGTAAATTC+AGG 0.420182 4:+8176438 MsG0480018659.01.T01:three_prime_UTR
CCGACTTATTGAACTGCTCT+TGG 0.431818 4:+8176261 MsG0480018659.01.T01:three_prime_UTR
AAGGTCATGACTCTTGCAAA+AGG 0.510428 4:-8176225 None:intergenic
CTTGTAAGTATATACTGAAG+TGG 0.522004 4:+8176498 MsG0480018659.01.T01:three_prime_UTR
ATGTGTGTACCAGGTCAAAA+CGG 0.545599 4:+8176086 MsG0480018659.01.T01:intron
TGTTTACAACAACCATGCTC+CGG 0.549356 4:+8176363 MsG0480018659.01.T01:three_prime_UTR
CAGGTCAAAACGGCTATGGT+TGG 0.571924 4:+8176096 MsG0480018659.01.T01:intron
TCAAAACGGCTATGGTTGGA+TGG 0.586926 4:+8176100 MsG0480018659.01.T01:three_prime_UTR
GTACCAGGTCAAAACGGCTA+TGG 0.592964 4:+8176092 MsG0480018659.01.T01:intron
CCAAGAGCAGTTCAATAAGT+CGG 0.605992 4:-8176261 None:intergenic
TCAAATACACTATCTAAGGA+TGG 0.616982 4:-8176464 None:intergenic
ATTTACAAGTACTTCTACAG+TGG 0.618484 4:-8176433 None:intergenic
AGTCGGATTCTAGAGAACAA+AGG 0.672423 4:-8176244 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGCAAAAAAATAAATAAA+AGG - Chr4:8173442-8173461 None:intergenic 10.0%
!!! ATTATTTATTTTTTTTGGTA+GGG + Chr4:8173992-8174011 MsG0480018659.01.T01:intron 10.0%
!!! ATTTGGAAATATATTATTTT+AGG - Chr4:8175141-8175160 None:intergenic 10.0%
!!! TATATTAATTTTTCAGAAAA+AGG - Chr4:8175381-8175400 None:intergenic 10.0%
!!! TATTATTTATTTTTTTTGGT+AGG + Chr4:8173991-8174010 MsG0480018659.01.T01:intron 10.0%
!! CAATAAAAGTTTGATTATTT+GGG + Chr4:8176633-8176652 MsG0480018659.01.T01:three_prime_UTR 15.0%
!! CATTAGTTATTGTAAAATTT+AGG + Chr4:8173953-8173972 MsG0480018659.01.T01:intron 15.0%
!! GATAATAAATTGAAAAAAGA+TGG - Chr4:8170036-8170055 None:intergenic 15.0%
!! TAATGACATAGAATTATTAT+AGG - Chr4:8174243-8174262 None:intergenic 15.0%
!! TACAAATACTCATTATTATA+TGG - Chr4:8168780-8168799 None:intergenic 15.0%
!! TCAATAAAAGTTTGATTATT+TGG + Chr4:8176632-8176651 MsG0480018659.01.T01:three_prime_UTR 15.0%
!! TGAATCAAAATTAGTATTTA+GGG + Chr4:8168176-8168195 MsG0480018659.01.T01:intron 15.0%
!! TGATCAAAAAAAAATTTCAT+TGG + Chr4:8173053-8173072 MsG0480018659.01.T01:intron 15.0%
!! TTATAAATTTAACATCATAC+TGG + Chr4:8172494-8172513 MsG0480018659.01.T01:intron 15.0%
!! TTGAATCAAAATTAGTATTT+AGG + Chr4:8168175-8168194 MsG0480018659.01.T01:intron 15.0%
!!! AAAACTTTGAAAAAGTATAA+AGG - Chr4:8173340-8173359 None:intergenic 15.0%
!!! AAACTTTGAAAAAGTATAAA+GGG - Chr4:8173339-8173358 None:intergenic 15.0%
!!! AATTCTTTAACTTAATAGAT+TGG + Chr4:8175351-8175370 MsG0480018659.01.T01:intron 15.0%
!!! CATAATTATTCATAATTTTC+AGG - Chr4:8171791-8171810 None:intergenic 15.0%
!!! TTTTGTTTAACTATTACATA+AGG + Chr4:8174858-8174877 MsG0480018659.01.T01:intron 15.0%
!! AAACATAAATAAGAACTCAA+AGG - Chr4:8169126-8169145 None:intergenic 20.0%
!! AATGACAAGTTATTCATATT+TGG - Chr4:8175158-8175177 None:intergenic 20.0%
!! AATTTATTTATGCTACAGAA+AGG - Chr4:8172396-8172415 None:intergenic 20.0%
!! ATCATGTTAAAATTACAGTT+AGG + Chr4:8172518-8172537 MsG0480018659.01.T01:intron 20.0%
!! ATGAAATGTTAAATAAAACC+AGG + Chr4:8169551-8169570 MsG0480018659.01.T01:intron 20.0%
!! ATTTATACTTTCAAAGCATA+AGG - Chr4:8175064-8175083 None:intergenic 20.0%
!! CATAATTTGGATAGTTATAA+TGG + Chr4:8171737-8171756 MsG0480018659.01.T01:intron 20.0%
!! CTTCAATTAATCTTTATCTT+TGG + Chr4:8176607-8176626 MsG0480018659.01.T01:three_prime_UTR 20.0%
!! GATGGTTAATAAATATAACA+AGG - Chr4:8171842-8171861 None:intergenic 20.0%
!! GATTGGAAAATGAAAAAATT+GGG + Chr4:8167880-8167899 MsG0480018659.01.T01:intron 20.0%
!! GCAAAAAAATAAATAAAAGG+AGG - Chr4:8173439-8173458 None:intergenic 20.0%
!! GGATGAATGATAATATTATA+GGG + Chr4:8170093-8170112 MsG0480018659.01.T01:intron 20.0%
!! TAAAGTTCAAATATCAGTTT+AGG - Chr4:8172477-8172496 None:intergenic 20.0%
!! TAATGAGTATTTGTATTGTT+AGG + Chr4:8168785-8168804 MsG0480018659.01.T01:intron 20.0%
!! TAATTCAAAATCTAACAAAC+CGG - Chr4:8167935-8167954 None:intergenic 20.0%
!! TCATGTTAAAATTACAGTTA+GGG + Chr4:8172519-8172538 MsG0480018659.01.T01:intron 20.0%
!! TGAAATGTTAAATAAAACCA+GGG + Chr4:8169552-8169571 MsG0480018659.01.T01:intron 20.0%
!! TGATTGGAAAATGAAAAAAT+TGG + Chr4:8167879-8167898 MsG0480018659.01.T01:intron 20.0%
!! TGGATGAATGATAATATTAT+AGG + Chr4:8170092-8170111 MsG0480018659.01.T01:intron 20.0%
!! TTCTTAGGTATTATGAAAAT+AGG + Chr4:8175177-8175196 MsG0480018659.01.T01:intron 20.0%
!! TTGATCTATTATGATTCAAT+TGG + Chr4:8174503-8174522 MsG0480018659.01.T01:intron 20.0%
!! TTTATAAATTTCATGCAGAA+TGG + Chr4:8169192-8169211 MsG0480018659.01.T01:intron 20.0%
!!! AAACCCTAAATACTTTTTTT+GGG - Chr4:8168368-8168387 None:intergenic 20.0%
!!! AACTTTGAAAAAGTATAAAG+GGG - Chr4:8173338-8173357 None:intergenic 20.0%
!!! ATTGAAACAAAGTTACTTTT+TGG + Chr4:8168954-8168973 MsG0480018659.01.T01:intron 20.0%
!!! ATTTTTTTTTCCCTTAAAAG+TGG + Chr4:8170129-8170148 MsG0480018659.01.T01:intron 20.0%
!!! CTAATAAGTATTTGACTTAT+TGG + Chr4:8168689-8168708 MsG0480018659.01.T01:intron 20.0%
!!! CTTGTATTTTCAACATAATT+TGG + Chr4:8171724-8171743 MsG0480018659.01.T01:intron 20.0%
!!! GATTTTTCAGATTTTCAAAA+TGG + Chr4:8167361-8167380 MsG0480018659.01.T01:intron 20.0%
!!! GTATTATTTTGACAACAATT+TGG + Chr4:8171530-8171549 MsG0480018659.01.T01:intron 20.0%
!!! TAACTTTGTTTCAATTTTCT+GGG - Chr4:8168949-8168968 None:intergenic 20.0%
!!! TTGAAACAAAGTTACTTTTT+GGG + Chr4:8168955-8168974 MsG0480018659.01.T01:intron 20.0%
!!! TTGTTTGATAAGCTTTTAAA+AGG - Chr4:8169764-8169783 None:intergenic 20.0%
! AAAATGAAACTGACATTGAT+TGG + Chr4:8170776-8170795 MsG0480018659.01.T01:intron 25.0%
! AAGTTGCAAAAATTACTAAC+AGG - Chr4:8175658-8175677 None:intergenic 25.0%
! ACAAAAATCCTTTGAATGAA+TGG - Chr4:8168037-8168056 None:intergenic 25.0%
! ACAATTGGAAGAAAAAGATA+CGG - Chr4:8175418-8175437 None:intergenic 25.0%
! ACAGTGCGTATTAAAATTTA+TGG + Chr4:8173394-8173413 MsG0480018659.01.T01:intron 25.0%
! ACATTCAAATACACTATCTA+AGG - Chr4:8176471-8176490 None:intergenic 25.0%
! AGGTTATTACAATATTTCCA+TGG - Chr4:8172457-8172476 None:intergenic 25.0%
! ATACATATATTGTCTTGCTT+AGG + Chr4:8173585-8173604 MsG0480018659.01.T01:three_prime_UTR 25.0%
! ATATGCATATCTGTCAAATA+TGG - Chr4:8171431-8171450 None:intergenic 25.0%
! ATTGTTCATTTAAATGCTAC+CGG + Chr4:8167913-8167932 MsG0480018659.01.T01:intron 25.0%
! CACAAAAATGCACATTAATA+AGG - Chr4:8168639-8168658 None:intergenic 25.0%
! CTAAAAATTAGACTATCTAC+TGG - Chr4:8173896-8173915 None:intergenic 25.0%
! GATAAAGTGATAAAGTGATA+TGG + Chr4:8169036-8169055 MsG0480018659.01.T01:intron 25.0%
! GATCAATACAAGTTTATGTA+AGG - Chr4:8174489-8174508 None:intergenic 25.0%
! GATTATTACTTTGATTCTCA+TGG + Chr4:8167815-8167834 MsG0480018659.01.T01:CDS 25.0%
! GTCAAATACTTATTAGATCA+TGG - Chr4:8168685-8168704 None:intergenic 25.0%
! GTTAATGCAGTTCAAATATA+TGG + Chr4:8171556-8171575 MsG0480018659.01.T01:intron 25.0%
! GTTTGTATATTGTTCATTGT+AGG + Chr4:8173162-8173181 MsG0480018659.01.T01:intron 25.0%
! TAAATTACCCTTATGTTTCT+AGG - Chr4:8174602-8174621 None:intergenic 25.0%
! TAACTCATAAAGTTAGTTAC+AGG - Chr4:8172674-8172693 None:intergenic 25.0%
! TAACTTTATGAGTTAGTTAC+AGG + Chr4:8172679-8172698 MsG0480018659.01.T01:intron 25.0%
! TATACACTTACTGATAGTAA+AGG - Chr4:8174466-8174485 None:intergenic 25.0%
! TATATTTATTAACCATCCAC+TGG + Chr4:8171845-8171864 MsG0480018659.01.T01:intron 25.0%
! TCCAAAATGTAAGCAAAAAT+AGG - Chr4:8170243-8170262 None:intergenic 25.0%
! TGAAAAGAAAATTAGCATTC+TGG + Chr4:8169692-8169711 MsG0480018659.01.T01:CDS 25.0%
! TGTATCTATAGGTATATGAT+TGG + Chr4:8167863-8167882 MsG0480018659.01.T01:intron 25.0%
! TTCACTTTAGACTTTCTATT+AGG + Chr4:8172139-8172158 MsG0480018659.01.T01:three_prime_UTR 25.0%
! TTGTTGTCAAATTTGTCAAA+AGG + Chr4:8171919-8171938 MsG0480018659.01.T01:intron 25.0%
! TTTATACCTTTATCAGATGT+TGG + Chr4:8169459-8169478 MsG0480018659.01.T01:CDS 25.0%
! TTTGTGAGACTTAAAACAAT+TGG - Chr4:8175433-8175452 None:intergenic 25.0%
!! AGTAATAGATTTTCATTCTC+TGG - Chr4:8169738-8169757 None:intergenic 25.0%
!! ATATTATTGCCTTATTCTTC+TGG + Chr4:8175495-8175514 MsG0480018659.01.T01:intron 25.0%
!! GTAATAGATTTTCATTCTCT+GGG - Chr4:8169737-8169756 None:intergenic 25.0%
!! GTTATGTAGAATCATTTTGT+CGG + Chr4:8174727-8174746 MsG0480018659.01.T01:intron 25.0%
!! GTTGAAAATACAAGATTTTC+AGG - Chr4:8171718-8171737 None:intergenic 25.0%
!! TATGCAGTCTTAAATTTTGA+TGG + Chr4:8176327-8176346 MsG0480018659.01.T01:three_prime_UTR 25.0%
!! TGAATAACTTGTCATTTCTT+AGG + Chr4:8175162-8175181 MsG0480018659.01.T01:intron 25.0%
!! TGATTCAATTGGAATTTGTT+TGG + Chr4:8174514-8174533 MsG0480018659.01.T01:intron 25.0%
!! TGTCAGTTTCATTTTCAAAT+TGG - Chr4:8170771-8170790 None:intergenic 25.0%
!! TTATAATGTGTTGATGTCTT+TGG + Chr4:8171965-8171984 MsG0480018659.01.T01:intron 25.0%
!! TTATGTAGAATCATTTTGTC+GGG + Chr4:8174728-8174747 MsG0480018659.01.T01:intron 25.0%
!! TTCCATTTAAAACCTATTTG+AGG - Chr4:8170343-8170362 None:intergenic 25.0%
!! TTGAAGAGAAGATTTTGTTA+CGG - Chr4:8167468-8167487 None:intergenic 25.0%
!! TTGATGCTTGACTTTTAAAT+GGG - Chr4:8173629-8173648 None:intergenic 25.0%
!! TTTTACAATTGTAGCAAGTT+AGG + Chr4:8175588-8175607 MsG0480018659.01.T01:intron 25.0%
!!! AAAAGTATTTAGGGTTTGTT+TGG + Chr4:8168371-8168390 MsG0480018659.01.T01:intron 25.0%
!!! AAAATTCAAGTTGATAGCTA+TGG - Chr4:8174841-8174860 None:intergenic 25.0%
!!! AACTTGCTACAATTGTAAAA+GGG - Chr4:8175588-8175607 None:intergenic 25.0%
!!! AATTGCATTCATTGACTTAA+TGG + Chr4:8173461-8173480 MsG0480018659.01.T01:intron 25.0%
!!! ACATTTTAACCATAAGAACT+GGG - Chr4:8172984-8173003 None:intergenic 25.0%
!!! ACCTATTTTTGCTTACATTT+TGG + Chr4:8170239-8170258 MsG0480018659.01.T01:intron 25.0%
!!! AGTTCCCAAAAAAAGTATTT+AGG + Chr4:8168361-8168380 MsG0480018659.01.T01:intron 25.0%
!!! ATCCTCAAATAGGTTTTAAA+TGG + Chr4:8170338-8170357 MsG0480018659.01.T01:intron 25.0%
!!! CAAACCCTAAATACTTTTTT+TGG - Chr4:8168369-8168388 None:intergenic 25.0%
!!! CTCAAATTGTTTTGCTAAAT+GGG + Chr4:8174215-8174234 MsG0480018659.01.T01:intron 25.0%
!!! GGAAAAACTTTATTTTTAGC+AGG + Chr4:8170359-8170378 MsG0480018659.01.T01:intron 25.0%
!!! GTAACTTTGTTTCAATTTTC+TGG - Chr4:8168950-8168969 None:intergenic 25.0%
!!! GTTCCCAAAAAAAGTATTTA+GGG + Chr4:8168362-8168381 MsG0480018659.01.T01:intron 25.0%
!!! TAACTTGCTACAATTGTAAA+AGG - Chr4:8175589-8175608 None:intergenic 25.0%
!!! TATTTTGACAACAATTTGGA+TGG + Chr4:8171534-8171553 MsG0480018659.01.T01:intron 25.0%
!!! TGATGATGAAATTTTAGAGT+CGG - Chr4:8169512-8169531 None:intergenic 25.0%
!!! TGTCATTTTTATCCATTGAT+GGG + Chr4:8170198-8170217 MsG0480018659.01.T01:intron 25.0%
!!! TGTTGTAAACTTGTTTTTTC+CGG - Chr4:8176385-8176404 None:intergenic 25.0%
!!! TTGTTAGGCTTGTTTTATAA+TGG + Chr4:8168800-8168819 MsG0480018659.01.T01:intron 25.0%
!!! TTTATTTTTTTTGGTAGGGT+CGG + Chr4:8173996-8174015 MsG0480018659.01.T01:intron 25.0%
AAAAAGTTCACTCGACAATT+GGG + Chr4:8174370-8174389 MsG0480018659.01.T01:intron 30.0%
AAAATACTCTTGCAACATTC+TGG + Chr4:8169819-8169838 MsG0480018659.01.T01:CDS 30.0%
AAAATGAATTCTTCTAACCG+TGG + Chr4:8172289-8172308 MsG0480018659.01.T01:intron 30.0%
AAATGAAAAGCTGATCAAAG+AGG + Chr4:8173005-8173024 MsG0480018659.01.T01:intron 30.0%
AAATGAATTCTTCTAACCGT+GGG + Chr4:8172290-8172309 MsG0480018659.01.T01:intron 30.0%
AACCAAACTATTTCATCATG+CGG - Chr4:8169603-8169622 None:intergenic 30.0%
AACTTCTCTAACATAGAATC+TGG - Chr4:8172070-8172089 None:intergenic 30.0%
AAGATTAATGCATGAGAGAA+AGG - Chr4:8175465-8175484 None:intergenic 30.0%
AATACTTGGGTGAAATAGAT+AGG + Chr4:8174028-8174047 MsG0480018659.01.T01:intron 30.0%
AATATAATGACGATAGAGCT+AGG + Chr4:8168714-8168733 MsG0480018659.01.T01:intron 30.0%
AATGAAAAGCTGATCAAAGA+GGG + Chr4:8173006-8173025 MsG0480018659.01.T01:intron 30.0%
AATTCACGCAAAATAAGAGA+AGG - Chr4:8170003-8170022 None:intergenic 30.0%
ACACAACGTCTAATAAATTG+CGG + Chr4:8175005-8175024 MsG0480018659.01.T01:intron 30.0%
ACCATAGAAGTCAATGAATT+GGG - Chr4:8171289-8171308 None:intergenic 30.0%
AGAACCTTTGTCTAAAGATA+AGG + Chr4:8170736-8170755 MsG0480018659.01.T01:intron 30.0%
AGATAATACAGTACATACCT+CGG - Chr4:8173295-8173314 None:intergenic 30.0%
AGATTAATGCATGAGAGAAA+GGG - Chr4:8175464-8175483 None:intergenic 30.0%
AGGTGTAAATATCACAACTT+AGG + Chr4:8171336-8171355 MsG0480018659.01.T01:intron 30.0%
ATAAGAACTCAAAGGTTCAA+TGG - Chr4:8169118-8169137 None:intergenic 30.0%
ATAATCCCTTGAATATGTCT+GGG + Chr4:8169236-8169255 MsG0480018659.01.T01:CDS 30.0%
ATACTTGGGTGAAATAGATA+GGG + Chr4:8174029-8174048 MsG0480018659.01.T01:intron 30.0%
ATAGCTCAGATGTGTTAATT+GGG + Chr4:8169787-8169806 MsG0480018659.01.T01:CDS 30.0%
ATATGCGCATTAAAGTGATA+TGG + Chr4:8169072-8169091 MsG0480018659.01.T01:intron 30.0%
ATATTGTCTTGCTTAGGAAA+TGG + Chr4:8173591-8173610 MsG0480018659.01.T01:three_prime_UTR 30.0%
ATATTTATGGTATGCTGAAG+TGG + Chr4:8173515-8173534 MsG0480018659.01.T01:three_prime_UTR 30.0%
ATCATCACTTGAAGAATCTT+GGG + Chr4:8169525-8169544 MsG0480018659.01.T01:intron 30.0%
ATGATAAAATGAAGTCTGCT+GGG + Chr4:8169335-8169354 MsG0480018659.01.T01:CDS 30.0%
ATGCACCTCTTCTATATTTA+TGG + Chr4:8173502-8173521 MsG0480018659.01.T01:three_prime_UTR 30.0%
ATGTTAAAGGTTTGTATTGG+TGG + Chr4:8169263-8169282 MsG0480018659.01.T01:CDS 30.0%
ATTACTAAGTGACACAATCA+TGG - Chr4:8170290-8170309 None:intergenic 30.0%
ATTCACGCAAAATAAGAGAA+GGG - Chr4:8170002-8170021 None:intergenic 30.0%
ATTTACAAGCCAGAAGAATA+AGG - Chr4:8175507-8175526 None:intergenic 30.0%
ATTTACAAGTACTTCTACAG+TGG - Chr4:8176436-8176455 None:intergenic 30.0%
ATTTCAGAAGATCCTCAAAT+AGG + Chr4:8170328-8170347 MsG0480018659.01.T01:intron 30.0%
CAATATTGATCTTGCAAGAA+AGG + Chr4:8173230-8173249 MsG0480018659.01.T01:three_prime_UTR 30.0%
CATAGTATAGCTCTTTATCA+AGG - Chr4:8172781-8172800 None:intergenic 30.0%
CATGATGTTTGTAATGAAAC+TGG - Chr4:8171102-8171121 None:intergenic 30.0%
CCATTTAGCAAAACAATTTG+AGG - Chr4:8174217-8174236 None:intergenic 30.0%
CGTTTATCTTATAAGTGCTA+AGG - Chr4:8168564-8168583 None:intergenic 30.0%
CTATATATAGACAGACTTCA+TGG + Chr4:8172648-8172667 MsG0480018659.01.T01:intron 30.0%
CTGATATGATGAAATTCGTA+CGG + Chr4:8172179-8172198 MsG0480018659.01.T01:three_prime_UTR 30.0%
CTGTCTATATATAGTCTTCA+AGG - Chr4:8172642-8172661 None:intergenic 30.0%
CTTACCATTTACAACAAATG+AGG - Chr4:8173109-8173128 None:intergenic 30.0%
CTTGTAAGTATATACTGAAG+TGG + Chr4:8176498-8176517 MsG0480018659.01.T01:three_prime_UTR 30.0%
GAATAATTATGCTCAGTGAA+TGG + Chr4:8171800-8171819 MsG0480018659.01.T01:intron 30.0%
GACATATTCAAGGGATTATA+CGG - Chr4:8169235-8169254 None:intergenic 30.0%
GACATGTTAAAGGTTTGTAT+TGG + Chr4:8169260-8169279 MsG0480018659.01.T01:CDS 30.0%
GCATACCATAAATATAGAAG+AGG - Chr4:8173510-8173529 None:intergenic 30.0%
GGAAAGAAAAAGCAAATATC+TGG + Chr4:8176519-8176538 MsG0480018659.01.T01:three_prime_UTR 30.0%
GGGAGAAAAATATAACATGT+TGG - Chr4:8172964-8172983 None:intergenic 30.0%
TAGACACGTATGATTACATT+CGG + Chr4:8168007-8168026 MsG0480018659.01.T01:intron 30.0%
TATAATCCCTTGAATATGTC+TGG + Chr4:8169235-8169254 MsG0480018659.01.T01:CDS 30.0%
TATAGTTGTAGAATGAATCC+TGG - Chr4:8172548-8172567 None:intergenic 30.0%
TCAAATACACTATCTAAGGA+TGG - Chr4:8176467-8176486 None:intergenic 30.0%
TCAACTTTATAAGCTTACAG+TGG - Chr4:8173919-8173938 None:intergenic 30.0%
TGAGAACAGTATTATCATCT+TGG + Chr4:8173691-8173710 MsG0480018659.01.T01:three_prime_UTR 30.0%
TGGGAATTGATATTAATGCT+GGG + Chr4:8170876-8170895 MsG0480018659.01.T01:intron 30.0%
TGGTTAACACTGTTTAAATG+AGG - Chr4:8171881-8171900 None:intergenic 30.0%
! AAACTGACATTGATTGGTTA+TGG + Chr4:8170782-8170801 MsG0480018659.01.T01:intron 30.0%
! AAGTCTAAAGTGAAACTAGT+AGG - Chr4:8172133-8172152 None:intergenic 30.0%
! AATCATTTTGTTCTGCAGAA+AGG + Chr4:8174810-8174829 MsG0480018659.01.T01:intron 30.0%
! AATCCGTGGATTATTTGAAA+GGG + Chr4:8175800-8175819 MsG0480018659.01.T01:intron 30.0%
! AATTGTCGAGTGAACTTTTT+GGG - Chr4:8174370-8174389 None:intergenic 30.0%
! ATGCTTTTAATCATAGTCTC+TGG + Chr4:8175082-8175101 MsG0480018659.01.T01:intron 30.0%
! ATTCTGGAAGTTACAAGTTA+TGG + Chr4:8169835-8169854 MsG0480018659.01.T01:CDS 30.0%
! ATTGTAGCAAGTTAGGTTTT+TGG + Chr4:8175595-8175614 MsG0480018659.01.T01:intron 30.0%
! CGTCTCAATTGTAAGTTTTT+AGG + Chr4:8171316-8171335 MsG0480018659.01.T01:intron 30.0%
! CTTGATGCTTGACTTTTAAA+TGG - Chr4:8173630-8173649 None:intergenic 30.0%
! GATTTTACAAGCTATAAGCA+TGG - Chr4:8176409-8176428 None:intergenic 30.0%
! GGCTAAACTTAGAGTATTAA+CGG + Chr4:8174051-8174070 MsG0480018659.01.T01:intron 30.0%
! TAAATATAGAAGAGGTGCAT+TGG - Chr4:8173502-8173521 None:intergenic 30.0%
! TAACTTGTGTTAGTTACAGT+TGG + Chr4:8172752-8172771 MsG0480018659.01.T01:intron 30.0%
! TATTTTTCTCCCAGTTCTTA+TGG + Chr4:8172972-8172991 MsG0480018659.01.T01:intron 30.0%
! TGAAGAGAAGATTTTGTTAC+GGG - Chr4:8167467-8167486 None:intergenic 30.0%
! TGATGCTTGACTTTTAAATG+GGG - Chr4:8173628-8173647 None:intergenic 30.0%
! TGCTTTTAATCATAGTCTCT+GGG + Chr4:8175083-8175102 MsG0480018659.01.T01:intron 30.0%
! TTAGTTCTTCTCATTACTGT+TGG + Chr4:8168871-8168890 MsG0480018659.01.T01:intron 30.0%
! TTATCTTGTTTGAACAGACT+TGG + Chr4:8170051-8170070 MsG0480018659.01.T01:intron 30.0%
! TTCAGTCCAGAACTTTTAAA+AGG + Chr4:8174959-8174978 MsG0480018659.01.T01:intron 30.0%
! TTTGGATCAAGCTTTTACTA+TGG + Chr4:8173809-8173828 MsG0480018659.01.T01:three_prime_UTR 30.0%
! TTTTTGTGTTCATAATGCAC+TGG + Chr4:8168651-8168670 MsG0480018659.01.T01:intron 30.0%
!! AATTCATTGACTTCTATGGT+GGG + Chr4:8171289-8171308 MsG0480018659.01.T01:three_prime_UTR 30.0%
!! ACTACACCTTTTAAAAGTTC+TGG - Chr4:8174968-8174987 None:intergenic 30.0%
!! AGAACTTTTAAAAGGTGTAG+TGG + Chr4:8174967-8174986 MsG0480018659.01.T01:intron 30.0%
!! ATTCATTGACTTAATGGAGT+AGG + Chr4:8173467-8173486 MsG0480018659.01.T01:intron 30.0%
!! CACATTAATAAGGCTTTGTT+TGG - Chr4:8168629-8168648 None:intergenic 30.0%
!! CACATTTTAACCATAAGAAC+TGG - Chr4:8172985-8173004 None:intergenic 30.0%
!! CATTTTCCAACCACTTTTAA+GGG - Chr4:8170142-8170161 None:intergenic 30.0%
!! CCTCAAATTGTTTTGCTAAA+TGG + Chr4:8174214-8174233 MsG0480018659.01.T01:intron 30.0%
!! GTAGAAGTACTTGTAAATTC+AGG + Chr4:8176438-8176457 MsG0480018659.01.T01:three_prime_UTR 30.0%
!! TCATTTTCCAACCACTTTTA+AGG - Chr4:8170143-8170162 None:intergenic 30.0%
!! TTCTAAAGCCATATACTTTC+CGG - Chr4:8169371-8169390 None:intergenic 30.0%
!! TTTAAAAGTTCTGGACTGAA+GGG - Chr4:8174959-8174978 None:intergenic 30.0%
!!! CTGTCATTTTTATCCATTGA+TGG + Chr4:8170197-8170216 MsG0480018659.01.T01:intron 30.0%
!!! GAAGAAATTGGGTGTTTTTT+AGG - Chr4:8174185-8174204 None:intergenic 30.0%
!!! TTATTTTTTTTGGTAGGGTC+GGG + Chr4:8173997-8174016 MsG0480018659.01.T01:intron 30.0%
!!! TTTTAAAAGTTCTGGACTGA+AGG - Chr4:8174960-8174979 None:intergenic 30.0%
!!! TTTTTTCCCTTAAAAGTGGT+TGG + Chr4:8170133-8170152 MsG0480018659.01.T01:intron 30.0%
AAAAGAGGCTCGACTATATT+TGG + Chr4:8171260-8171279 MsG0480018659.01.T01:three_prime_UTR 35.0%
AAAAGTTCACTCGACAATTG+GGG + Chr4:8174371-8174390 MsG0480018659.01.T01:intron 35.0%
AAACTGAACTCTGTTCTTAC+TGG + Chr4:8176130-8176149 MsG0480018659.01.T01:three_prime_UTR 35.0%
AAAGGAGGTTGTGTATACAT+AGG - Chr4:8173424-8173443 None:intergenic 35.0%
AAATAAGTAGAGCCCACAAA+AGG + Chr4:8174305-8174324 MsG0480018659.01.T01:intron 35.0%
AAATTACAGTTAGGGTTACC+AGG + Chr4:8172527-8172546 MsG0480018659.01.T01:intron 35.0%
AACAAAAGTCGACAAGAACT+TGG - Chr4:8171904-8171923 None:intergenic 35.0%
AACCGCATGATGAAATAGTT+TGG + Chr4:8169598-8169617 MsG0480018659.01.T01:CDS 35.0%
AACCTAATACTTTGAACCAG+CGG - Chr4:8171399-8171418 None:intergenic 35.0%
AACTCATCTTGTGTTGTATG+AGG - Chr4:8169441-8169460 None:intergenic 35.0%
AACTTTGTTCTTCCCATCAA+TGG - Chr4:8170213-8170232 None:intergenic 35.0%
AATCAGGTCTGATGAAAGTT+TGG + Chr4:8174903-8174922 MsG0480018659.01.T01:intron 35.0%
AATTCTTGCATGTTGTTCAG+AGG + Chr4:8169862-8169881 MsG0480018659.01.T01:CDS 35.0%
ACAAATGAAGATGCATAACC+TGG - Chr4:8173840-8173859 None:intergenic 35.0%
ACATCAGTTCACATCATATC+AGG - Chr4:8176287-8176306 None:intergenic 35.0%
ACCTTTGTCTAAAGATAAGG+AGG + Chr4:8170739-8170758 MsG0480018659.01.T01:intron 35.0%
AGATGTGTTAATTGGGAGAT+GGG + Chr4:8169794-8169813 MsG0480018659.01.T01:CDS 35.0%
AGGGCTAATGATGCATTTAT+GGG + Chr4:8168149-8168168 MsG0480018659.01.T01:intron 35.0%
AGTCTGACCTAGAAACATAA+GGG + Chr4:8174592-8174611 MsG0480018659.01.T01:intron 35.0%
ATCAGGTCTGATGAAAGTTT+GGG + Chr4:8174904-8174923 MsG0480018659.01.T01:intron 35.0%
ATGTTCTGCTTCATTGTTTG+AGG + Chr4:8173752-8173771 MsG0480018659.01.T01:three_prime_UTR 35.0%
ATTACATAAGGATGCTTCAG+AGG + Chr4:8174870-8174889 MsG0480018659.01.T01:intron 35.0%
ATTGATATTAATGCTGGGGA+TGG + Chr4:8170881-8170900 MsG0480018659.01.T01:intron 35.0%
CAAAAAGTTCACTCGACAAT+TGG + Chr4:8174369-8174388 MsG0480018659.01.T01:intron 35.0%
CACCATAGAAGTCAATGAAT+TGG - Chr4:8171290-8171309 None:intergenic 35.0%
CATCATCACTTGAAGAATCT+TGG + Chr4:8169524-8169543 MsG0480018659.01.T01:intron 35.0%
CCAAAGCTTCAAAGCTATAA+GGG + Chr4:8175984-8176003 MsG0480018659.01.T01:intron 35.0%
CCTTTGTCTAAAGATAAGGA+GGG + Chr4:8170740-8170759 MsG0480018659.01.T01:intron 35.0%
CTAGAGAACTCCATTATTAG+TGG + Chr4:8171457-8171476 MsG0480018659.01.T01:intron 35.0%
CTGGGAATTGATATTAATGC+TGG + Chr4:8170875-8170894 MsG0480018659.01.T01:intron 35.0%
GAATGAAGAAAGAGAAGAAG+AGG + Chr4:8167690-8167709 MsG0480018659.01.T01:CDS 35.0%
GAGCTTGCAAATAACACTAA+CGG + Chr4:8173537-8173556 MsG0480018659.01.T01:three_prime_UTR 35.0%
GATAATACAGTACATACCTC+GGG - Chr4:8173294-8173313 None:intergenic 35.0%
GATAGCTCAGATGTGTTAAT+TGG + Chr4:8169786-8169805 MsG0480018659.01.T01:CDS 35.0%
GATCGTGATAATCTTGCATT+TGG + Chr4:8167839-8167858 MsG0480018659.01.T01:CDS 35.0%
GATGATAAAATGAAGTCTGC+TGG + Chr4:8169334-8169353 MsG0480018659.01.T01:CDS 35.0%
GATGTACCAACATCTGATAA+AGG - Chr4:8169468-8169487 None:intergenic 35.0%
GCAATTTATTAGACGTTGTG+TGG - Chr4:8175006-8175025 None:intergenic 35.0%
GCATATCTGTCAAATATGGA+AGG - Chr4:8171427-8171446 None:intergenic 35.0%
GCTTCTAACACTAACTGATT+CGG - Chr4:8168841-8168860 None:intergenic 35.0%
GGGAATTGATATTAATGCTG+GGG + Chr4:8170877-8170896 MsG0480018659.01.T01:intron 35.0%
GTATTATCATCTTGGTTTCG+TGG + Chr4:8173699-8173718 MsG0480018659.01.T01:three_prime_UTR 35.0%
GTGTCTGTATATACAAGTGT+TGG - Chr4:8173376-8173395 None:intergenic 35.0%
GTGTGCTAATAGATAACTAG+TGG - Chr4:8174662-8174681 None:intergenic 35.0%
GTTAGTGAGTGTATTGAATG+TGG + Chr4:8168108-8168127 MsG0480018659.01.T01:intron 35.0%
TACTCAAACAAAGGGAATGT+TGG - Chr4:8168289-8168308 None:intergenic 35.0%
TACTTGGGTGAAATAGATAG+GGG + Chr4:8174030-8174049 MsG0480018659.01.T01:intron 35.0%
TAGGGCTAATGATGCATTTA+TGG + Chr4:8168148-8168167 MsG0480018659.01.T01:intron 35.0%
TATGGAGGATAATCAAGATG+AGG + Chr4:8170800-8170819 MsG0480018659.01.T01:intron 35.0%
TCACATACACCTGAAAATCA+TGG - Chr4:8171656-8171675 None:intergenic 35.0%
TCTCTTAAACAGTCTCACAA+GGG - Chr4:8168416-8168435 None:intergenic 35.0%
TCTTTGCTCTGACTTCAATT+GGG + Chr4:8168322-8168341 MsG0480018659.01.T01:intron 35.0%
TGATATGGCATTGTTATCTG+TGG + Chr4:8173257-8173276 MsG0480018659.01.T01:three_prime_UTR 35.0%
TTAAATACAAGTCCTCACCA+GGG - Chr4:8175949-8175968 None:intergenic 35.0%
TTCATGTAAATGTGTGTACC+AGG + Chr4:8176077-8176096 MsG0480018659.01.T01:intron 35.0%
TTCTATTAGGAAGTTCCATG+AGG + Chr4:8172152-8172171 MsG0480018659.01.T01:three_prime_UTR 35.0%
TTGATATTAATGCTGGGGAT+GGG + Chr4:8170882-8170901 MsG0480018659.01.T01:intron 35.0%
TTGCATTTGGCTGTATCTAT+AGG + Chr4:8167852-8167871 MsG0480018659.01.T01:CDS 35.0%
TTTAAATACAAGTCCTCACC+AGG - Chr4:8175950-8175969 None:intergenic 35.0%
TTTCAACAAACAGTCCAACT+TGG + Chr4:8172014-8172033 MsG0480018659.01.T01:three_prime_UTR 35.0%
! AACGACTGTTTGAGCATTTT+TGG + Chr4:8170574-8170593 MsG0480018659.01.T01:three_prime_UTR 35.0%
! AGCAAAACAATTTGAGGTGT+TGG - Chr4:8174211-8174230 None:intergenic 35.0%
! CAATTGTCGAGTGAACTTTT+TGG - Chr4:8174371-8174390 None:intergenic 35.0%
! CTATGGACTACTCAAACAAA+GGG - Chr4:8168297-8168316 None:intergenic 35.0%
! CTTCTAACACTAACTGATTC+GGG - Chr4:8168840-8168859 None:intergenic 35.0%
! GAAAATTAGCATTCTGGAGA+AGG + Chr4:8169698-8169717 MsG0480018659.01.T01:CDS 35.0%
! GAAGAGAAGATTTTGTTACG+GGG - Chr4:8167466-8167485 None:intergenic 35.0%
! GAATCCGTGGATTATTTGAA+AGG + Chr4:8175799-8175818 MsG0480018659.01.T01:intron 35.0%
! GGTGTTGGATTGAAGAAATT+GGG - Chr4:8174196-8174215 None:intergenic 35.0%
! GTGCTTTTGTCAAAACGTTA+TGG - Chr4:8172102-8172121 None:intergenic 35.0%
! TCTATGGACTACTCAAACAA+AGG - Chr4:8168298-8168317 None:intergenic 35.0%
! TGTTGTATGAGGAGACATTT+TGG - Chr4:8169430-8169449 None:intergenic 35.0%
! TTAAAAGGTGTAGTGGAAGT+TGG + Chr4:8174974-8174993 MsG0480018659.01.T01:intron 35.0%
! TTGTATTGGTGGAATCAAAG+TGG + Chr4:8169274-8169293 MsG0480018659.01.T01:CDS 35.0%
! TTTTCCACGTAATCACGTTT+TGG + Chr4:8172228-8172247 MsG0480018659.01.T01:three_prime_UTR 35.0%
!! AGGTGTTGGATTGAAGAAAT+TGG - Chr4:8174197-8174216 None:intergenic 35.0%
!! ATTGTAGGATGTTTGTTGTG+TGG + Chr4:8173177-8173196 MsG0480018659.01.T01:intron 35.0%
!! CAATTCATTGACTTCTATGG+TGG + Chr4:8171288-8171307 MsG0480018659.01.T01:three_prime_UTR 35.0%
!! CCTTATAGCTTTGAAGCTTT+GGG - Chr4:8175986-8176005 None:intergenic 35.0%
!! CTGCTTCATTTTTCTTCTGT+AGG + Chr4:8171990-8172009 MsG0480018659.01.T01:intron 35.0%
!! GTGTGAATTTTGTGCTGTTA+GGG + Chr4:8168130-8168149 MsG0480018659.01.T01:intron 35.0%
!! GTTTCAATTTTCTGGGAACA+AGG - Chr4:8168942-8168961 None:intergenic 35.0%
!! TCCCAATTCATTGACTTCTA+TGG + Chr4:8171285-8171304 MsG0480018659.01.T01:three_prime_UTR 35.0%
!! TCGGGTTGATTGAAATACTT+GGG + Chr4:8174015-8174034 MsG0480018659.01.T01:intron 35.0%
!! TCTGCCTCATTTGTTGTAAA+TGG + Chr4:8173102-8173121 MsG0480018659.01.T01:intron 35.0%
!! TGCAAGAAAGGTGTTTGATA+TGG + Chr4:8173242-8173261 MsG0480018659.01.T01:three_prime_UTR 35.0%
!! TTTTGGGTGCTTAAAGAGAA+GGG - Chr4:8174354-8174373 None:intergenic 35.0%
!!! CTTTAGAGTTTTGCAGGTTA+AGG + Chr4:8168740-8168759 MsG0480018659.01.T01:intron 35.0%
!!! GAGCATTTTTGGAATAGTCA+TGG + Chr4:8170585-8170604 MsG0480018659.01.T01:three_prime_UTR 35.0%
!!! GTTTTTGGTTTCCTGCATAA+TGG + Chr4:8175610-8175629 MsG0480018659.01.T01:intron 35.0%
!!! TGTGTAGCTTTTTTTTCAGC+AGG + Chr4:8175224-8175243 MsG0480018659.01.T01:intron 35.0%
!!! TTTTTGGGTGCTTAAAGAGA+AGG - Chr4:8174355-8174374 None:intergenic 35.0%
AAAAGCCAGACAACTACAGA+TGG - Chr4:8175738-8175757 None:intergenic 40.0%
AAAAGTCGACAAGAACTTGG+TGG - Chr4:8171901-8171920 None:intergenic 40.0%
AAAGTTCACTCGACAATTGG+GGG + Chr4:8174372-8174391 MsG0480018659.01.T01:intron 40.0%
AACCATGGAAACCTTGAACT+TGG - Chr4:8169894-8169913 None:intergenic 40.0%
AAGCTTCAAAGCTATAAGGG+AGG + Chr4:8175987-8176006 MsG0480018659.01.T01:intron 40.0%
AAGGACAGAGCCACTAATAA+TGG - Chr4:8171470-8171489 None:intergenic 40.0%
AAGGTCATGACTCTTGCAAA+AGG - Chr4:8176228-8176247 None:intergenic 40.0%
ACAAAGGGAATGTTGGCATA+TGG - Chr4:8168282-8168301 None:intergenic 40.0%
ACACTTTGACCTGGATCAAA+TGG + Chr4:8170917-8170936 MsG0480018659.01.T01:intron 40.0%
ACCTACTTAGGAACCCAAAT+AGG - Chr4:8174118-8174137 None:intergenic 40.0%
ACTTGTAACAGCGTTCATCT+AGG - Chr4:8175036-8175055 None:intergenic 40.0%
AGAAGAAGAGGAAGAAGAAG+CGG + Chr4:8167702-8167721 MsG0480018659.01.T01:CDS 40.0%
AGAGGAATTCTCCAAGTTCA+AGG + Chr4:8169880-8169899 MsG0480018659.01.T01:CDS 40.0%
AGATGGCGATATTGATGCTT+TGG + Chr4:8169312-8169331 MsG0480018659.01.T01:CDS 40.0%
AGCACATCAGACTCTTAACA+TGG - Chr4:8171375-8171394 None:intergenic 40.0%
AGCATACATCTTCCTAACCA+TGG - Chr4:8169909-8169928 None:intergenic 40.0%
AGCATCTACAACTATTGCCA+TGG + Chr4:8172437-8172456 MsG0480018659.01.T01:intron 40.0%
AGCTGCATGATACTTAGTGT+AGG - Chr4:8172727-8172746 None:intergenic 40.0%
AGTTCAAGGTTTCCATGGTT+AGG + Chr4:8169894-8169913 MsG0480018659.01.T01:intron 40.0%
AGTTCTTGCTGAACAATTGC+AGG - Chr4:8170414-8170433 None:intergenic 40.0%
ATAAGCATACACACAGCGTA+TGG - Chr4:8172813-8172832 None:intergenic 40.0%
ATAAGGTTGCAGGAATGCAA+CGG + Chr4:8169643-8169662 MsG0480018659.01.T01:CDS 40.0%
ATGAGGTTAATTACGTCCAG+TGG - Chr4:8171864-8171883 None:intergenic 40.0%
ATGCCTATTCGAAGGAAGTT+AGG + Chr4:8170976-8170995 MsG0480018659.01.T01:intron 40.0%
ATGGCATTGTTATCTGTGGA+AGG + Chr4:8173261-8173280 MsG0480018659.01.T01:three_prime_UTR 40.0%
ATGTGTGTACCAGGTCAAAA+CGG + Chr4:8176086-8176105 MsG0480018659.01.T01:intron 40.0%
ATTAGAACCTGGACCTAAAG+AGG - Chr4:8168256-8168275 None:intergenic 40.0%
CAAATAATCCACGGATTCTG+TGG - Chr4:8175797-8175816 None:intergenic 40.0%
CAACGTCTAATAAATTGCGG+CGG + Chr4:8175008-8175027 MsG0480018659.01.T01:intron 40.0%
CACCTGAAAATCATGGTTCA+TGG - Chr4:8171649-8171668 None:intergenic 40.0%
CAGATGTGTTAATTGGGAGA+TGG + Chr4:8169793-8169812 MsG0480018659.01.T01:CDS 40.0%
CAGTCTGACCTAGAAACATA+AGG + Chr4:8174591-8174610 MsG0480018659.01.T01:intron 40.0%
CATCATATCAGCATTCCTCA+TGG - Chr4:8172170-8172189 None:intergenic 40.0%
CATTTCCTCAAGCAACAAGA+TGG - Chr4:8173035-8173054 None:intergenic 40.0%
CCAAGAGCAGTTCAATAAGT+CGG - Chr4:8176264-8176283 None:intergenic 40.0%
CCCAAAGCTTCAAAGCTATA+AGG + Chr4:8175983-8176002 MsG0480018659.01.T01:intron 40.0%
CCCTCCTTATCTTTAGACAA+AGG - Chr4:8170743-8170762 None:intergenic 40.0%
CCTACTTAGGAACCCAAATA+GGG - Chr4:8174117-8174136 None:intergenic 40.0%
CTACCTAACTTCCTTCGAAT+AGG - Chr4:8170982-8171001 None:intergenic 40.0%
CTACTTAGGAACCCAAATAG+GGG - Chr4:8174116-8174135 None:intergenic 40.0%
CTATTCGAAGGAAGTTAGGT+AGG + Chr4:8170980-8170999 MsG0480018659.01.T01:intron 40.0%
CTCTCACATGAAAATGAAGG+CGG + Chr4:8170695-8170714 MsG0480018659.01.T01:three_prime_UTR 40.0%
CTCTCTTAAACAGTCTCACA+AGG - Chr4:8168417-8168436 None:intergenic 40.0%
CTGCCCTTTCAAATAATCCA+CGG - Chr4:8175806-8175825 None:intergenic 40.0%
CTGTATTATCTGCTGCAACT+TGG + Chr4:8173304-8173323 MsG0480018659.01.T01:intron 40.0%
CTTGCAAATAACACTAACGG+TGG + Chr4:8173540-8173559 MsG0480018659.01.T01:three_prime_UTR 40.0%
CTTTGCTCTGACTTCAATTG+GGG + Chr4:8168323-8168342 MsG0480018659.01.T01:intron 40.0%
GAAAACCATCTGTAGTTGTC+TGG + Chr4:8175730-8175749 MsG0480018659.01.T01:intron 40.0%
GAAGAGGTTGTATCTGTTCA+TGG - Chr4:8171147-8171166 None:intergenic 40.0%
GAAGTTATGACACTTTGACC+TGG + Chr4:8170908-8170927 MsG0480018659.01.T01:intron 40.0%
GAATCAAAGTGGTTCACTTG+GGG + Chr4:8169285-8169304 MsG0480018659.01.T01:CDS 40.0%
GAGAAGAACTAAGAAGTCAC+AGG - Chr4:8168863-8168882 None:intergenic 40.0%
GAGCTCTCACATGAAAATGA+AGG + Chr4:8170692-8170711 MsG0480018659.01.T01:three_prime_UTR 40.0%
GATTCTCGAATCTTCGGAAT+CGG + Chr4:8167658-8167677 MsG0480018659.01.T01:CDS 40.0%
GCATATGGAGAATTAGAACC+TGG - Chr4:8168267-8168286 None:intergenic 40.0%
GGAATCAAAGTGGTTCACTT+GGG + Chr4:8169284-8169303 MsG0480018659.01.T01:CDS 40.0%
GGAGTTCAACAAACTGACAA+GGG + Chr4:8169573-8169592 MsG0480018659.01.T01:CDS 40.0%
GTCTAAAGATAAGGAGGGTA+CGG + Chr4:8170745-8170764 MsG0480018659.01.T01:intron 40.0%
GTCTTTGCTCTGACTTCAAT+TGG + Chr4:8168321-8168340 MsG0480018659.01.T01:intron 40.0%
GTGAGCTAAATGCTTAGCTT+TGG + Chr4:8174701-8174720 MsG0480018659.01.T01:intron 40.0%
GTTATCTATTAGCACACACG+AGG + Chr4:8174665-8174684 MsG0480018659.01.T01:intron 40.0%
TAAATACAAGTCCTCACCAG+GGG - Chr4:8175948-8175967 None:intergenic 40.0%
TATTAGACGTTGTGTGGAAG+TGG - Chr4:8175000-8175019 None:intergenic 40.0%
TCAAGCTGATGATTCTTCAC+CGG + Chr4:8170386-8170405 MsG0480018659.01.T01:intron 40.0%
TCAGATGTTGGTACATCTCA+AGG + Chr4:8169471-8169490 MsG0480018659.01.T01:intron 40.0%
TCAGTCTTTGCAGATTTGAG+TGG + Chr4:8170454-8170473 MsG0480018659.01.T01:intron 40.0%
TCTTCCAAAACGTGATTACG+TGG - Chr4:8172235-8172254 None:intergenic 40.0%
TGATATTAATGCTGGGGATG+GGG + Chr4:8170883-8170902 MsG0480018659.01.T01:intron 40.0%
TGCAACCTTATCTTGGAACT+CGG - Chr4:8169634-8169653 None:intergenic 40.0%
TGGAATCAAAGTGGTTCACT+TGG + Chr4:8169283-8169302 MsG0480018659.01.T01:CDS 40.0%
TGGCATTGTTATCTGTGGAA+GGG + Chr4:8173262-8173281 MsG0480018659.01.T01:three_prime_UTR 40.0%
TGTGCATGTATGACCTACTT+AGG - Chr4:8174130-8174149 None:intergenic 40.0%
TGTTCATAATGCACTGGACT+AGG + Chr4:8168657-8168676 MsG0480018659.01.T01:intron 40.0%
TGTTTACAACAACCATGCTC+CGG + Chr4:8176363-8176382 MsG0480018659.01.T01:three_prime_UTR 40.0%
TGTTTGAGTAGTCCATAGAG+AGG + Chr4:8168299-8168318 MsG0480018659.01.T01:intron 40.0%
TTACGCGATTCTCGAATCTT+CGG + Chr4:8167652-8167671 MsG0480018659.01.T01:CDS 40.0%
TTCAGCCTGAAATAAAGCAG+TGG - Chr4:8170502-8170521 None:intergenic 40.0%
TTCCTGCATAATGGTGTGTA+TGG + Chr4:8175619-8175638 MsG0480018659.01.T01:intron 40.0%
TTCTTCTGACCATTTGATCC+AGG - Chr4:8170929-8170948 None:intergenic 40.0%
TTGTCATACGAGATGTCTAG+AGG + Chr4:8175762-8175781 MsG0480018659.01.T01:intron 40.0%
TTGTTTGAGGAGCTAACTTC+TGG + Chr4:8173765-8173784 MsG0480018659.01.T01:three_prime_UTR 40.0%
TTTCACCCTGAACACAAAAG+AGG + Chr4:8171245-8171264 MsG0480018659.01.T01:three_prime_UTR 40.0%
TTTGCTCTGACTTCAATTGG+GGG + Chr4:8168324-8168343 MsG0480018659.01.T01:intron 40.0%
! AATAGTCATGGTGCTAGAGT+CGG + Chr4:8170597-8170616 MsG0480018659.01.T01:three_prime_UTR 40.0%
! AGTCGGATTCTAGAGAACAA+AGG - Chr4:8176247-8176266 None:intergenic 40.0%
! ATACTGGTCCGGAAAGTATA+TGG + Chr4:8169360-8169379 MsG0480018659.01.T01:CDS 40.0%
! ATTGAAGCTTTGTCTGCTTC+AGG + Chr4:8169935-8169954 MsG0480018659.01.T01:intron 40.0%
! CACCATGAACCATGATTTTC+AGG + Chr4:8171644-8171663 MsG0480018659.01.T01:intron 40.0%
! CTGACATTGATTGGTTATGG+AGG + Chr4:8170785-8170804 MsG0480018659.01.T01:intron 40.0%
! CTTCTAGAGATTGTGATCAG+TGG + Chr4:8170953-8170972 MsG0480018659.01.T01:intron 40.0%
! CTTTTGTGTTCAGGGTGAAA+AGG - Chr4:8171245-8171264 None:intergenic 40.0%
! GACGTTTAGAGCATATACGA+CGG + Chr4:8174082-8174101 MsG0480018659.01.T01:intron 40.0%
! GGAATTTGTTTGGTCAGCTT+GGG + Chr4:8174524-8174543 MsG0480018659.01.T01:intron 40.0%
! GGTGTTATGTGGATGGTTAT+TGG - Chr4:8171628-8171647 None:intergenic 40.0%
! TCGGTTTGCCATTCATTCAA+AGG + Chr4:8168026-8168045 MsG0480018659.01.T01:intron 40.0%
! TCTGATGAGAGAAGTGGATT+TGG + Chr4:8167737-8167756 MsG0480018659.01.T01:CDS 40.0%
! TGGAATTTGTTTGGTCAGCT+TGG + Chr4:8174523-8174542 MsG0480018659.01.T01:intron 40.0%
! TTTAGAGCATATACGACGGA+TGG + Chr4:8174086-8174105 MsG0480018659.01.T01:intron 40.0%
! TTTTGCCGAGTTCCAAGATA+AGG + Chr4:8169626-8169645 MsG0480018659.01.T01:CDS 40.0%
!! AGTTGCCACTGCTTTATTTC+AGG + Chr4:8170494-8170513 MsG0480018659.01.T01:three_prime_UTR 40.0%
!! CCCTTATAGCTTTGAAGCTT+TGG - Chr4:8175987-8176006 None:intergenic 40.0%
!! GAGAATTTGCTAAAGCTGCT+GGG + Chr4:8170857-8170876 MsG0480018659.01.T01:intron 40.0%
!! GGTGTGAATTTTGTGCTGTT+AGG + Chr4:8168129-8168148 MsG0480018659.01.T01:intron 40.0%
!! GTCGGGTTGATTGAAATACT+TGG + Chr4:8174014-8174033 MsG0480018659.01.T01:intron 40.0%
!! TACCGCTGGTTCAAAGTATT+AGG + Chr4:8171394-8171413 MsG0480018659.01.T01:intron 40.0%
!! TCATGGTTCATGGTGTTATG+TGG - Chr4:8171639-8171658 None:intergenic 40.0%
!! TGAGAATTTGCTAAAGCTGC+TGG + Chr4:8170856-8170875 MsG0480018659.01.T01:intron 40.0%
!!! AACTTGTTTTTTCCGGAGCA+TGG - Chr4:8176378-8176397 None:intergenic 40.0%
!!! AGGCTTCTTTAGAGTTTTGC+AGG + Chr4:8168734-8168753 MsG0480018659.01.T01:intron 40.0%
!!! ATTTTGGAGCAACAAGACGT+AGG - Chr4:8169414-8169433 None:intergenic 40.0%
AAAATACGTCGAGCTGCAGA+AGG - Chr4:8175904-8175923 None:intergenic 45.0%
AAATGACCAATCTGTCGCTC+TGG + Chr4:8173728-8173747 MsG0480018659.01.T01:three_prime_UTR 45.0%
AACATACCAGAGCGACAGAT+TGG - Chr4:8173737-8173756 None:intergenic 45.0%
AACTGCTTAGAGCACGTCAA+GGG + Chr4:8173655-8173674 MsG0480018659.01.T01:three_prime_UTR 45.0%
AAGCCAGAAGCCAACAAAGA+AGG - Chr4:8171489-8171508 None:intergenic 45.0%
AATACAGTACATACCTCGGG+AGG - Chr4:8173291-8173310 None:intergenic 45.0%
ACAGGTGCAATGCTAAGCTA+CGG + Chr4:8172697-8172716 MsG0480018659.01.T01:intron 45.0%
ACCTAGGCAGAAGTTCAATG+GGG + Chr4:8168896-8168915 MsG0480018659.01.T01:intron 45.0%
AGCGACATCGTCATTGATGA+CGG - Chr4:8167549-8167568 None:intergenic 45.0%
AGGAGCAAGAAAGTAGAGAG+AGG - Chr4:8172376-8172395 None:intergenic 45.0%
AGGGATTATACGGTTTGTGC+CGG - Chr4:8169225-8169244 None:intergenic 45.0%
AGTGTGTTCTCTGTCCAAGT+TGG - Chr4:8172031-8172050 None:intergenic 45.0%
AGTTTGGGAATCCGTTTCTC+AGG + Chr4:8174919-8174938 MsG0480018659.01.T01:intron 45.0%
ATCAGTGGATGCCTATTCGA+AGG + Chr4:8170968-8170987 MsG0480018659.01.T01:intron 45.0%
ATCGCGTAAGACTTCTCCTT+AGG - Chr4:8167641-8167660 None:intergenic 45.0%
ATGAAAATGAAGGCGGAGGT+TGG + Chr4:8170702-8170721 MsG0480018659.01.T01:three_prime_UTR 45.0%
ATGTCGCCCAGACATATTCA+AGG - Chr4:8169245-8169264 None:intergenic 45.0%
ATGTCTGGGCGACATGTTAA+AGG + Chr4:8169250-8169269 MsG0480018659.01.T01:CDS 45.0%
CAACTTCTTCGCTTCCTCAA+TGG + Chr4:8167492-8167511 MsG0480018659.01.T01:CDS 45.0%
CACCTAGGCAGAAGTTCAAT+GGG + Chr4:8168895-8168914 MsG0480018659.01.T01:intron 45.0%
CAGAAGTTCAATGGGGATTG+CGG + Chr4:8168903-8168922 MsG0480018659.01.T01:intron 45.0%
CAGCGATGAAAATCGACCTA+AGG + Chr4:8167622-8167641 MsG0480018659.01.T01:CDS 45.0%
CATGCAGAATGGATATTGCC+CGG + Chr4:8169203-8169222 MsG0480018659.01.T01:intron 45.0%
CCGACTTATTGAACTGCTCT+TGG + Chr4:8176261-8176280 MsG0480018659.01.T01:three_prime_UTR 45.0%
CGACGTGTGTAGTGTTGTAT+CGG + Chr4:8168059-8168078 MsG0480018659.01.T01:intron 45.0%
CTAACTTCTGGATGTGATGC+GGG + Chr4:8173777-8173796 MsG0480018659.01.T01:three_prime_UTR 45.0%
CTAGAGTTACTGAGCCATTG+AGG - Chr4:8167509-8167528 None:intergenic 45.0%
CTCATTACTGTTGGTCACCT+AGG + Chr4:8168880-8168899 MsG0480018659.01.T01:intron 45.0%
CTCCAAGTTCAAGGTTTCCA+TGG + Chr4:8169889-8169908 MsG0480018659.01.T01:CDS 45.0%
GACAGAGAACACACTTAGCT+TGG + Chr4:8172036-8172055 MsG0480018659.01.T01:three_prime_UTR 45.0%
GAGCAAGAAAGTAGAGAGAG+GGG - Chr4:8172374-8172393 None:intergenic 45.0%
GAGTGCTTCACTAGTAGAAG+AGG - Chr4:8171163-8171182 None:intergenic 45.0%
GAGTTCCAAGATAAGGTTGC+AGG + Chr4:8169633-8169652 MsG0480018659.01.T01:CDS 45.0%
GATAGGTCTGATGAGAGAAG+TGG + Chr4:8167731-8167750 MsG0480018659.01.T01:CDS 45.0%
GATATTAATGCTGGGGATGG+GGG + Chr4:8170884-8170903 MsG0480018659.01.T01:intron 45.0%
GCATTCCTGCAACCTTATCT+TGG - Chr4:8169641-8169660 None:intergenic 45.0%
GCTAACTTCTGGATGTGATG+CGG + Chr4:8173776-8173795 MsG0480018659.01.T01:three_prime_UTR 45.0%
GGACCAAAAACCACCTCATT+CGG + Chr4:8167382-8167401 MsG0480018659.01.T01:CDS 45.0%
GGAGCAAGAAAGTAGAGAGA+GGG - Chr4:8172375-8172394 None:intergenic 45.0%
GGATGCTCAGATCACTAACT+TGG + Chr4:8170072-8170091 MsG0480018659.01.T01:intron 45.0%
GGGAGTTCAACAAACTGACA+AGG + Chr4:8169572-8169591 MsG0480018659.01.T01:intron 45.0%
GGTGCATGTTAGTGCTTCAT+AGG + Chr4:8168080-8168099 MsG0480018659.01.T01:intron 45.0%
GGTTAATTACGTCCAGTGGA+TGG - Chr4:8171860-8171879 None:intergenic 45.0%
GTTTGGGAATCCGTTTCTCA+GGG + Chr4:8174920-8174939 MsG0480018659.01.T01:intron 45.0%
TCAAAACGGCTATGGTTGGA+TGG + Chr4:8176100-8176119 MsG0480018659.01.T01:three_prime_UTR 45.0%
TCACATGAAAATGAAGGCGG+AGG + Chr4:8170698-8170717 MsG0480018659.01.T01:three_prime_UTR 45.0%
TCACCTAGGCAGAAGTTCAA+TGG + Chr4:8168894-8168913 MsG0480018659.01.T01:intron 45.0%
TCAGAGCAAAGACCTCTCTA+TGG - Chr4:8168314-8168333 None:intergenic 45.0%
TCATACGAGATGTCTAGAGG+TGG + Chr4:8175765-8175784 MsG0480018659.01.T01:intron 45.0%
TCTTTGCAGATTTGAGTGGC+AGG + Chr4:8170458-8170477 MsG0480018659.01.T01:intron 45.0%
TGCCATACACACCATTATGC+AGG - Chr4:8175624-8175643 None:intergenic 45.0%
TGCTGAACAATTGCAGGATC+CGG - Chr4:8170408-8170427 None:intergenic 45.0%
TGGTGTATATGCACGAAGAG+AGG + Chr4:8173197-8173216 MsG0480018659.01.T01:three_prime_UTR 45.0%
TGTCGCCCAGACATATTCAA+GGG - Chr4:8169244-8169263 None:intergenic 45.0%
TTAGGGTTTGTAACCCGCAT+GGG + Chr4:8168193-8168212 MsG0480018659.01.T01:intron 45.0%
TTCAATGGGGATTGCGGATT+GGG + Chr4:8168909-8168928 MsG0480018659.01.T01:intron 45.0%
TTGCTCTGACTTCAATTGGG+GGG + Chr4:8168325-8168344 MsG0480018659.01.T01:intron 45.0%
TTGGAGAAAGAGGAGGAACT+AGG + Chr4:8170651-8170670 MsG0480018659.01.T01:three_prime_UTR 45.0%
TTTGCAGCTCAGTTGTACTG+TGG + Chr4:8175841-8175860 MsG0480018659.01.T01:intron 45.0%
! ACCCTCTTGCTTCCTTTTGT+GGG - Chr4:8174320-8174339 None:intergenic 45.0%
! AGAGAACACACTTAGCTTGG+AGG + Chr4:8172039-8172058 MsG0480018659.01.T01:three_prime_UTR 45.0%
! AGAGAAGTGGATTTGGTTCG+AGG + Chr4:8167744-8167763 MsG0480018659.01.T01:CDS 45.0%
! CCCTATTTGGGTTCCTAAGT+AGG + Chr4:8174114-8174133 MsG0480018659.01.T01:intron 45.0%
! GAGTGAAGGTTTTGCTTCGT+CGG - Chr4:8167432-8167451 None:intergenic 45.0%
! GCTTTTACTATGGTGCTTCC+AGG + Chr4:8173819-8173838 MsG0480018659.01.T01:three_prime_UTR 45.0%
! TCGAGCCTCTTTTGTGTTCA+GGG - Chr4:8171253-8171272 None:intergenic 45.0%
! TGAAGCACTCGAAACAGAAG+AGG + Chr4:8171173-8171192 MsG0480018659.01.T01:three_prime_UTR 45.0%
! TTTAGGGTTTGTAACCCGCA+TGG + Chr4:8168192-8168211 MsG0480018659.01.T01:intron 45.0%
!! CGCTTACTATCAGAAGTGTC+TGG - Chr4:8167981-8168000 None:intergenic 45.0%
!! GGTTCATGGTGTTATGTGGA+TGG - Chr4:8171635-8171654 None:intergenic 45.0%
!! TGTCAGTTTGTTGAACTCCC+TGG - Chr4:8169572-8169591 None:intergenic 45.0%
!! TGTCCTTCTTTGTTGGCTTC+TGG + Chr4:8171483-8171502 MsG0480018659.01.T01:intron 45.0%
!!! TGATGCGGGCATTGAAGTTT+TGG + Chr4:8173791-8173810 MsG0480018659.01.T01:three_prime_UTR 45.0%
!!! CTTTTATTATTTATTTTTTT+TGG + Chr4:8173987-8174006 MsG0480018659.01.T01:intron 5.0%
AGCCCACAAAAGGAAGCAAG+AGG + Chr4:8174315-8174334 MsG0480018659.01.T01:intron 50.0%
CAACTGCTTAGAGCACGTCA+AGG + Chr4:8173654-8173673 MsG0480018659.01.T01:three_prime_UTR 50.0%
CACATGGTTGGAGAAAGAGG+AGG + Chr4:8170644-8170663 MsG0480018659.01.T01:three_prime_UTR 50.0%
CAGGTCAAAACGGCTATGGT+TGG + Chr4:8176096-8176115 MsG0480018659.01.T01:intron 50.0%
CAGGTGCAATGCTAAGCTAC+GGG + Chr4:8172698-8172717 MsG0480018659.01.T01:intron 50.0%
CCAAAAACCACCTCATTCGG+CGG + Chr4:8167385-8167404 MsG0480018659.01.T01:CDS 50.0%
CCTAAAGAGGAGCAACACCT+AGG - Chr4:8168243-8168262 None:intergenic 50.0%
CTCCTCTTTCTCCAACCATG+TGG - Chr4:8170646-8170665 None:intergenic 50.0%
CTCGAATCTTCGGAATCGGA+TGG + Chr4:8167662-8167681 MsG0480018659.01.T01:CDS 50.0%
CTCTGCTCTGTGAGTAGCAA+AGG - Chr4:8170549-8170568 None:intergenic 50.0%
CTGGACTGAAGGGATATAGC+TGG - Chr4:8174949-8174968 None:intergenic 50.0%
GAAATCGCGTGTTCGAGCTT+GGG + Chr4:8167766-8167785 MsG0480018659.01.T01:CDS 50.0%
GACTGAAGGGATATAGCTGG+AGG - Chr4:8174946-8174965 None:intergenic 50.0%
GCACGAAGAGAGGCTGATTA+TGG + Chr4:8173207-8173226 MsG0480018659.01.T01:three_prime_UTR 50.0%
GCCCACAAAAGGAAGCAAGA+GGG + Chr4:8174316-8174335 MsG0480018659.01.T01:intron 50.0%
GGGAAGACAGAGAAGAGTGA+AGG - Chr4:8167446-8167465 None:intergenic 50.0%
GGGATTATACGGTTTGTGCC+GGG - Chr4:8169224-8169243 None:intergenic 50.0%
GGTTCACTTGGGGAAAGAGA+TGG + Chr4:8169295-8169314 MsG0480018659.01.T01:CDS 50.0%
GTACCAGGTCAAAACGGCTA+TGG + Chr4:8176092-8176111 MsG0480018659.01.T01:intron 50.0%
GTCCACATGGTTGGAGAAAG+AGG + Chr4:8170641-8170660 MsG0480018659.01.T01:three_prime_UTR 50.0%
GTGCTAGAGTCGGAGAAGAA+GGG + Chr4:8170607-8170626 MsG0480018659.01.T01:three_prime_UTR 50.0%
GTTCAATGGGGATTGCGGAT+TGG + Chr4:8168908-8168927 MsG0480018659.01.T01:intron 50.0%
TAGGCAACGAGTCGTCAAAG+AGG + Chr4:8170670-8170689 MsG0480018659.01.T01:three_prime_UTR 50.0%
TCATTCGGCGGAAGAAACGA+CGG + Chr4:8167397-8167416 MsG0480018659.01.T01:CDS 50.0%
TCCCCATTGAACTTCTGCCT+AGG - Chr4:8168900-8168919 None:intergenic 50.0%
TCTTCGGAATCGGATGGAGA+TGG + Chr4:8167668-8167687 MsG0480018659.01.T01:CDS 50.0%
TGCTAGAGTCGGAGAAGAAG+GGG + Chr4:8170608-8170627 MsG0480018659.01.T01:three_prime_UTR 50.0%
TGCTCTGACTTCAATTGGGG+GGG + Chr4:8168326-8168345 MsG0480018659.01.T01:intron 50.0%
TGCTCTGTGAGTAGCAAAGG+AGG - Chr4:8170546-8170565 None:intergenic 50.0%
TGTACTGTGGCGTTGCTACT+GGG + Chr4:8175854-8175873 MsG0480018659.01.T01:three_prime_UTR 50.0%
TGTTGCTCCTCTTTAGGTCC+AGG + Chr4:8168246-8168265 MsG0480018659.01.T01:intron 50.0%
TTGTACTGTGGCGTTGCTAC+TGG + Chr4:8175853-8175872 MsG0480018659.01.T01:three_prime_UTR 50.0%
! AGAAGAAGCGGAAGCGTGAT+AGG + Chr4:8167714-8167733 MsG0480018659.01.T01:CDS 50.0%
! CTGTTTTCATCGTCGTCTGG+TGG - Chr4:8167605-8167624 None:intergenic 50.0%
! GAAGGTTTTGCTTCGTCGGA+CGG - Chr4:8167428-8167447 None:intergenic 50.0%
! GACCCTCTTGCTTCCTTTTG+TGG - Chr4:8174321-8174340 None:intergenic 50.0%
! GGAAGCCATCTTGTTGCTTG+AGG + Chr4:8173027-8173046 MsG0480018659.01.T01:intron 50.0%
! GGTGGTGTAAGTTGAGACCT+AGG + Chr4:8168223-8168242 MsG0480018659.01.T01:intron 50.0%
! GTCGAGCCTCTTTTGTGTTC+AGG - Chr4:8171254-8171273 None:intergenic 50.0%
! GTGGCTCTGTCCTTCTTTGT+TGG + Chr4:8171476-8171495 MsG0480018659.01.T01:intron 50.0%
! TCAATGGGGATTGCGGATTG+GGG + Chr4:8168910-8168929 MsG0480018659.01.T01:intron 50.0%
! TTTTCATCGTCGTCTGGTGG+CGG - Chr4:8167602-8167621 None:intergenic 50.0%
!! CAACCATAGCCGTTTTGACC+TGG - Chr4:8176098-8176117 None:intergenic 50.0%
!! CAGAGGCATCAGAAGCAATC+AGG + Chr4:8174887-8174906 MsG0480018659.01.T01:intron 50.0%
!! CCTAGGTGTTGCTCCTCTTT+AGG + Chr4:8168240-8168259 MsG0480018659.01.T01:intron 50.0%
!! GTCATTGATGACGGCGATGT+CGG - Chr4:8167540-8167559 None:intergenic 50.0%
!! TAAAGAGAAGGGTGCCTGGA+AGG - Chr4:8174343-8174362 None:intergenic 50.0%
!! TCGCTGTTTTCATCGTCGTC+TGG - Chr4:8167608-8167627 None:intergenic 50.0%
!! TGCTTAAAGAGAAGGGTGCC+TGG - Chr4:8174347-8174366 None:intergenic 50.0%
ACCACCAAGTCAACCCATGC+GGG - Chr4:8168209-8168228 None:intergenic 55.0%
ACGGATGGAGCTCCCCTATT+TGG + Chr4:8174101-8174120 MsG0480018659.01.T01:intron 55.0%
AGAGTCTGATGTGCTACCGC+TGG + Chr4:8171380-8171399 MsG0480018659.01.T01:intron 55.0%
AGCTCGACTAGCGTAACCCA+CGG - Chr4:8172309-8172328 None:intergenic 55.0%
CACCACCAAGTCAACCCATG+CGG - Chr4:8168210-8168229 None:intergenic 55.0%
CGGATGGAGCTCCCCTATTT+GGG + Chr4:8174102-8174121 MsG0480018659.01.T01:intron 55.0%
CTTCAGGCAGCAAGCACTCT+AGG + Chr4:8169951-8169970 MsG0480018659.01.T01:intron 55.0%
GCAGGAATGCAACGGCAGAA+AGG + Chr4:8169651-8169670 MsG0480018659.01.T01:CDS 55.0%
GCTCTGACTTCAATTGGGGG+GGG + Chr4:8168327-8168346 MsG0480018659.01.T01:intron 55.0%
GGAAATCGCGTGTTCGAGCT+TGG + Chr4:8167765-8167784 MsG0480018659.01.T01:CDS 55.0%
GGCTCAATCCACAGAATCCG+TGG + Chr4:8175786-8175805 MsG0480018659.01.T01:intron 55.0%
GGGTTACGCTAGTCGAGCTT+TGG + Chr4:8172310-8172329 MsG0480018659.01.T01:intron 55.0%
GGTGCTAGAGTCGGAGAAGA+AGG + Chr4:8170606-8170625 MsG0480018659.01.T01:three_prime_UTR 55.0%
GTCGTTTCTTCCGCCGAATG+AGG - Chr4:8167398-8167417 None:intergenic 55.0%
GTTTCTTCCGCCGAATGAGG+TGG - Chr4:8167395-8167414 None:intergenic 55.0%
TAGCTGGAGGCCCTGAGAAA+CGG - Chr4:8174933-8174952 None:intergenic 55.0%
TGAAGTCTGCTGGGCGATAC+TGG + Chr4:8169344-8169363 MsG0480018659.01.T01:CDS 55.0%
TGCAGATTTGAGTGGCAGGC+TGG + Chr4:8170462-8170481 MsG0480018659.01.T01:intron 55.0%
! AATGAAGGCGGAGGTTGGTC+TGG + Chr4:8170707-8170726 MsG0480018659.01.T01:three_prime_UTR 55.0%
! ACAATTGGGGGTGTGTGTGG+GGG + Chr4:8174384-8174403 MsG0480018659.01.T01:intron 55.0%
! CCGCCGAATGAGGTGGTTTT+TGG - Chr4:8167388-8167407 None:intergenic 55.0%
! CGACAATTGGGGGTGTGTGT+GGG + Chr4:8174382-8174401 MsG0480018659.01.T01:intron 55.0%
! GACAATTGGGGGTGTGTGTG+GGG + Chr4:8174383-8174402 MsG0480018659.01.T01:intron 55.0%
! GTAACCCGCATGGGTTGACT+TGG + Chr4:8168202-8168221 MsG0480018659.01.T01:intron 55.0%
! TCGACAATTGGGGGTGTGTG+TGG + Chr4:8174381-8174400 MsG0480018659.01.T01:intron 55.0%
! TCGAGCTTGGGCTGATTCTG+AGG + Chr4:8167778-8167797 MsG0480018659.01.T01:CDS 55.0%
! TCTCGGTTGGTCCACATGGT+TGG + Chr4:8170632-8170651 MsG0480018659.01.T01:three_prime_UTR 55.0%
AGGCAGCAAGCACTCTAGGC+AGG + Chr4:8169955-8169974 MsG0480018659.01.T01:intron 60.0%
ATCCATGCTTGCCCCTGGTG+AGG + Chr4:8175934-8175953 MsG0480018659.01.T01:intron 60.0%
GAGAAGAAGGGGCTCTCGGT+TGG + Chr4:8170619-8170638 MsG0480018659.01.T01:three_prime_UTR 60.0%
GGAAGCAAGAGGGTCCTTCC+AGG + Chr4:8174326-8174345 MsG0480018659.01.T01:intron 60.0%
GTCGGAGAAGAAGGGGCTCT+CGG + Chr4:8170615-8170634 MsG0480018659.01.T01:three_prime_UTR 60.0%
GTGCTATCCATGCTTGCCCC+TGG + Chr4:8175929-8175948 MsG0480018659.01.T01:three_prime_UTR 60.0%
TCTGCTGGGCGATACTGGTC+CGG + Chr4:8169349-8169368 MsG0480018659.01.T01:CDS 60.0%
TGACTTCAATTGGGGGGGGC+TGG + Chr4:8168331-8168350 MsG0480018659.01.T01:intron 60.0%
! CAATTGGGGGTGTGTGTGGG+GGG + Chr4:8174385-8174404 MsG0480018659.01.T01:intron 60.0%
! GGTTTTGCTTCGTCGGACGG+TGG - Chr4:8167425-8167444 None:intergenic 60.0%
!! AAGGCGGAGGTTGGTCTGGT+TGG + Chr4:8170711-8170730 MsG0480018659.01.T01:three_prime_UTR 60.0%
!! ACCCGCATGGGTTGACTTGG+TGG + Chr4:8168205-8168224 MsG0480018659.01.T01:intron 60.0%
!! ATGGGGATTGCGGATTGGGG+AGG + Chr4:8168913-8168932 MsG0480018659.01.T01:intron 60.0%
!! TGGGGATTGCGGATTGGGGA+GGG + Chr4:8168914-8168933 MsG0480018659.01.T01:intron 60.0%
AGGGTAGGGTGGGTGTGGTG+GGG + Chr4:8174408-8174427 MsG0480018659.01.T01:intron 65.0%
GAGGGTAGGGTGGGTGTGGT+GGG + Chr4:8174407-8174426 MsG0480018659.01.T01:intron 65.0%
GCGGCGATTGCACGGTTTCG+CGG - Chr4:8167583-8167602 None:intergenic 65.0%
GTCCTCACCAGGGGCAAGCA+TGG - Chr4:8175939-8175958 None:intergenic 65.0%
GTGTGTGTGGGGGGAGGGTA+GGG + Chr4:8174394-8174413 MsG0480018659.01.T01:intron 65.0%
TGTGGAAGGGCTTCCTCCCG+AGG + Chr4:8173275-8173294 MsG0480018659.01.T01:three_prime_UTR 65.0%
! GGGCTCTCGGTTGGTCCACA+TGG + Chr4:8170628-8170647 MsG0480018659.01.T01:three_prime_UTR 65.0%
!! GTCTGGTGGCGGCGATTGCA+CGG - Chr4:8167591-8167610 None:intergenic 65.0%
GGAGGGTAGGGTGGGTGTGG+TGG + Chr4:8174406-8174425 MsG0480018659.01.T01:intron 70.0%
GGGTAGGGTGGGTGTGGTGG+GGG + Chr4:8174409-8174428 MsG0480018659.01.T01:intron 70.0%
GGTGTGTGTGGGGGGAGGGT+AGG + Chr4:8174393-8174412 MsG0480018659.01.T01:intron 70.0%
GTGTGGGGGGAGGGTAGGGT+GGG + Chr4:8174398-8174417 MsG0480018659.01.T01:intron 70.0%
TGTGTGGGGGGAGGGTAGGG+TGG + Chr4:8174397-8174416 MsG0480018659.01.T01:intron 70.0%
! GGTAGGGTGGGTGTGGTGGG+GGG + Chr4:8174410-8174429 MsG0480018659.01.T01:intron 70.0%
! GTAGGGTGGGTGTGGTGGGG+GGG + Chr4:8174411-8174430 MsG0480018659.01.T01:intron 70.0%
! TGGGGGTGTGTGTGGGGGGA+GGG + Chr4:8174389-8174408 MsG0480018659.01.T01:intron 70.0%
! TTGGGGGTGTGTGTGGGGGG+AGG + Chr4:8174388-8174407 MsG0480018659.01.T01:intron 70.0%
GGGGGAGGGTAGGGTGGGTG+TGG + Chr4:8174403-8174422 MsG0480018659.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 8167361 8176653 8167361 ID=MsG0480018660.01;
Chr4 mRNA 8167361 8176653 8167361 ID=MsG0480018660.01.T01;Parent=MsG0480018660.01
Chr4 exon 8167361 8167873 8167361 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8167380 8167873 8167380 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 CDS 8169210 8169480 8169210 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8169210 8169480 8169210 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8169573 8169672 8169573 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8169573 8169672 8169573 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8169882 8169976 8169882 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8169882 8169976 8169882 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8170381 8170732 8170381 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8170381 8170732 8170381 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8171154 8171325 8171154 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8171154 8171325 8171154 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8172012 8172235 8172012 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8172012 8172235 8172012 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8173184 8173296 8173184 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8173184 8173296 8173184 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8173489 8173840 8173489 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8173489 8173840 8173489 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8174828 8175053 8174828 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8174828 8175053 8174828 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8175731 8175783 8175731 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8175731 8175783 8175731 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8175848 8175950 8175848 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8175848 8175950 8175848 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Chr4 CDS 8176099 8176243 8176099 ID=MsG0480018660.01.T01.cds;Parent=MsG0480018660.01.T01
Chr4 exon 8176099 8176653 8176099 ID=MsG0480018660.01.T01.exon;Parent=MsG0480018660.01.T01
Gene Sequence

>MsG0480018660.01.T01

ATGGACCAAAAACCACCTCATTCGGCGGAAGAAACGACGGCGCCACCGTCCGACGAAGCAAAACCTTCACTCTTCTCTGTCTTCCCCGTAACAAAATCTTCTCTTCAAATCACAACTTCTTCGCTTCCTCAATGGCTCAGTAACTCTAGCTTCACAACCGACATCGCCGTCATCAATGACGATGTCGCTTCATTACTCAACCGCGAAACCGTGCAATCGCCGCCACCAGACGACGATGAAAACAGCGATGAAAATCGACCTAAGGAGAAGTCTTACGCGATTCTCGAATCTTCGGAATCGGATGGAGATGGAATGAAGAAAGAGAAGAAGAGGAAGAAGAAGCGGAAGCGTGATAGGTCTGATGAGAGAAGTGGATTTGGTTCGAGGAAATCGCGTGTTCGAGCTTGGGCTGATTCTGAGGCTAATACTGTTAAAGATTATTACTTTGATTCTCATGGTGATCGTGATAATCTTGCATTTGGCTGTATCTATAGAATGGATATTGCCCGGCACAAACCGTATAATCCCTTGAATATGTCTGGGCGACATGTTAAAGGTTTGTATTGGTGGAATCAAAGTGGTTCACTTGGGGAAAGAGATGGCGATATTGATGCTTTGGATGATAAAATGAAGTCTGCTGGGCGATACTGGTCCGGAAAGTATATGGCTTTAGAACGACATAAAAGCTTCAAGCGCCTACGTCTTGTTGCTCCAAAATGTCTCCTCATACAACACAAGATGAGTTTATACCTTTATCAGATGTTGGGAGTTCAACAAACTGACAAGGGAGAACCGCATGATGAAATAGTTTGGTTACATTTTGCCGAGTTCCAAGATAAGGTTGCAGGAATGCAACGGCAGAAAGAGGAATTCTCCAAGTTCAAGGTTTCCATGGTTAGGAAGATGTATGCTTATGCTATTGAAGCTTTGTCTGCTTCAGGCAGCAAGCACTCTAGGCAGGCTCTTCAAGCTGATGATTCTTCACCGGATCCTGCAATTGTTCAGCAAGAACTTCGTCTTGTAGATATATTTCTCAGTCTTTGCAGATTTGAGTGGCAGGCTGGTTATAGAGAAGTTGCCACTGCTTTATTTCAGGCTGAAATTGAGTTTAGTTTATTTTGTCCTCCTTTGCTACTCACAGAGCAGAGTAAGCAACGACTGTTTGAGCATTTTTGGAATAGTCATGGTGCTAGAGTCGGAGAAGAAGGGGCTCTCGGTTGGTCCACATGGTTGGAGAAAGAGGAGGAACTAGGCAACGAGTCGTCAAAGAGGAGCTCTCACATGAAAATGAAGGCGGAGGTTGGTCTGGTTGATACAACCTCTTCTACTAGTGAAGCACTCGAAACAGAAGAGGATGAGAAACTCTCGAGAATCATATTGTATGAAGATGTAAGCGAATACCTTTTCACCCTGAACACAAAAGAGGCTCGACTATATTTGGTGTCCCAATTCATTGACTTCTATGGTGGGAAGACGTCTCAATTGTTTTCAACAAACAGTCCAACTTGGACAGAGAACACACTTAGCTTGGAGGATCTGCCAGATTCTATGTTAGAGAAGTTGAAATGCATCCATAACGTTTTGACAAAAGCACAAAGCATTCCTACTAGTTTCACTTTAGACTTTCTATTAGGAAGTTCCATGAGGAATGCTGATATGATGAAATTCGTACGGAATGCAGTCTTACTTTGCTTAACTGTTTTTCCACGATGTTTGTTGTGTGGTGTATATGCACGAAGAGAGGCTGATTATGGCAATATTGATCTTGCAAGAAAGGTGTTTGATATGGCATTGTTATCTGTGGAAGGGCTTCCTCCCGAGGAGATTCAGTCCAATGCACCTCTTCTATATTTATGGTATGCTGAAGTGGAGCTTGCAAATAACACTAACGGTGGTCGTGAATCTTCATATCGTGCGATACATATATTGTCTTGCTTAGGAAATGGTACAAAATACACCCCATTTAAAAGTCAAGCATCAAGTTTGCAACTGCTTAGAGCACGTCAAGGGTTTAAAGAAAAACTGAGAACAGTATTATCATCTTGGTTTCGTGGTATAATAAATGACCAATCTGTCGCTCTGGTATGTTCTGCTTCATTGTTTGAGGAGCTAACTTCTGGATGTGATGCGGGCATTGAAGTTTTGGATCAAGCTTTTACTATGGTGCTTCCAGAAAGGAGAAGCCATAGCTATCAACTTGAATTTTTGTTTAACTATTACATAAGGATGCTTCAGAGGCATCAGAAGCAATCAGGTCTGATGAAAGTTTGGGAATCCGTTTCTCAGGGCCTCCAGCTATATCCCTTCAGTCCAGAACTTTTAAAAGGTGTAGTGGAAGTTGGCCACTTCCACACAACGTCTAATAAATTGCGGCGGATCCTAGATGAACGCTGTTACAAAAAACCATCTGTAGTTGTCTGGCTTTTTGCATTGTCATACGAGATGTCTAGAGCTCAGTTGTACTGTGGCGTTGCTACTGGGTATGAATTGAACATTGCACATGATCCTTCTGCAGCTCGACGTATTTTCTTTCGTGCTATCCATGCTTGCCCCTGGTCAAAACGGCTATGGTTGGATGGATTTCTCAAACTGAACTCTGTTCTTACTGGAAAAGAGCTTTCTGATCTACAAGAAGTAATGCGTGATAAAGAACTAAATCTAAGAACTGACATTTATGAGATCCTTTTGCAAGAGTCATGA

Protein sequence

>MsG0480018660.01.T01

MDQKPPHSAEETTAPPSDEAKPSLFSVFPVTKSSLQITTSSLPQWLSNSSFTTDIAVINDDVASLLNRETVQSPPPDDDENSDENRPKEKSYAILESSESDGDGMKKEKKRKKKRKRDRSDERSGFGSRKSRVRAWADSEANTVKDYYFDSHGDRDNLAFGCIYRMDIARHKPYNPLNMSGRHVKGLYWWNQSGSLGERDGDIDALDDKMKSAGRYWSGKYMALERHKSFKRLRLVAPKCLLIQHKMSLYLYQMLGVQQTDKGEPHDEIVWLHFAEFQDKVAGMQRQKEEFSKFKVSMVRKMYAYAIEALSASGSKHSRQALQADDSSPDPAIVQQELRLVDIFLSLCRFEWQAGYREVATALFQAEIEFSLFCPPLLLTEQSKQRLFEHFWNSHGARVGEEGALGWSTWLEKEEELGNESSKRSSHMKMKAEVGLVDTTSSTSEALETEEDEKLSRIILYEDVSEYLFTLNTKEARLYLVSQFIDFYGGKTSQLFSTNSPTWTENTLSLEDLPDSMLEKLKCIHNVLTKAQSIPTSFTLDFLLGSSMRNADMMKFVRNAVLLCLTVFPRCLLCGVYARREADYGNIDLARKVFDMALLSVEGLPPEEIQSNAPLLYLWYAEVELANNTNGGRESSYRAIHILSCLGNGTKYTPFKSQASSLQLLRARQGFKEKLRTVLSSWFRGIINDQSVALVCSASLFEELTSGCDAGIEVLDQAFTMVLPERRSHSYQLEFLFNYYIRMLQRHQKQSGLMKVWESVSQGLQLYPFSPELLKGVVEVGHFHTTSNKLRRILDERCYKKPSVVVWLFALSYEMSRAQLYCGVATGYELNIAHDPSAARRIFFRAIHACPWSKRLWLDGFLKLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQES*