AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011494.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011494.01.T01 MTR_3g005670 93.798 645 13 3 1 637 1 626 0.0 991
MsG0380011494.01.T01 MTR_3g005670 93.488 645 13 4 1 637 1 624 0.0 983
MsG0380011494.01.T01 MTR_3g005670 92.869 603 16 3 1 595 1 584 0.0 900
MsG0380011494.01.T01 MTR_3g005670 93.344 601 13 3 1 593 1 582 0.0 900
MsG0380011494.01.T01 MTR_3g005670 93.012 601 13 4 1 593 1 580 0.0 891
MsG0380011494.01.T01 MTR_3g005670 92.537 603 16 4 1 595 1 582 0.0 891
MsG0380011494.01.T01 MTR_3g005670 92.771 581 15 3 1 573 1 562 0.0 855
MsG0380011494.01.T01 MTR_2g013130 58.476 525 186 8 125 636 16 521 0.0 556
MsG0380011494.01.T01 MTR_2g013130 57.524 525 176 9 125 636 16 506 0.0 537
MsG0380011494.01.T01 MTR_2g013130 63.570 409 130 5 239 636 1 401 0.0 523
MsG0380011494.01.T01 MTR_2g013130 67.590 361 103 2 287 636 1 358 1.66e-177 508
MsG0380011494.01.T01 MTR_1g041735 27.933 358 225 10 234 587 553 881 2.95e-33 137
MsG0380011494.01.T01 MTR_1g041735 27.933 358 225 10 234 587 515 843 3.63e-33 136
MsG0380011494.01.T01 MTR_1g041735 28.011 357 224 10 234 586 395 722 1.30e-32 135
MsG0380011494.01.T01 MTR_1g041735 27.875 287 186 7 234 518 553 820 1.46e-26 115
MsG0380011494.01.T01 MTR_5g070100 37.500 72 45 0 423 494 38 109 6.00e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011494.01.T01 AT4G36690 69.147 551 152 9 97 635 27 571 0.0 686
MsG0380011494.01.T01 AT4G36690 66.055 545 157 10 97 635 27 549 0.0 684
MsG0380011494.01.T01 AT1G60900 78.960 423 83 3 216 636 170 588 0.0 655
MsG0380011494.01.T01 AT4G36690 68.724 486 134 9 97 570 27 506 0.0 583
MsG0380011494.01.T01 AT4G36690 68.519 486 135 9 97 570 27 506 0.0 581
MsG0380011494.01.T01 AT1G60830 70.909 110 32 0 527 636 1 110 2.97e-51 172
MsG0380011494.01.T01 AT1G60830 70.909 110 32 0 527 636 1 110 2.97e-51 172
MsG0380011494.01.T01 AT2G33435 25.815 399 250 10 201 577 763 1137 1.04e-33 138
MsG0380011494.01.T01 AT5G09880 24.557 395 198 16 298 630 165 521 6.62e-15 78.2
MsG0380011494.01.T01 AT5G16780 40.833 120 68 2 68 186 28 145 4.44e-12 69.7
MsG0380011494.01.T01 AT5G16780 40.833 120 68 2 68 186 28 145 4.44e-12 69.7
MsG0380011494.01.T01 AT5G16780 40.833 120 68 2 68 186 28 145 4.44e-12 69.7

Find 201 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAATATCTGCAGGTAATT+TGG 0.109716 3:+394217 MsG0380011494.01.T01:intron
ATGCAGGGATTATTATATTT+TGG 0.152376 3:+395012 MsG0380011494.01.T01:three_prime_UTR
GGAGAGAAAAGGAGAGAAAA+AGG 0.195497 3:+390028 MsG0380011494.01.T01:CDS
ATCCAAAGCCATTGCATTGC+TGG 0.249411 3:-393205 None:intergenic
GTAGGCAGGGGAAACATATT+TGG 0.249719 3:-392433 None:intergenic
GGACTGAATGGAAGAAAATT+TGG 0.262626 3:+394879 MsG0380011494.01.T01:CDS
CGACAGGAATGCTCCAAATT+TGG 0.265569 3:+394002 MsG0380011494.01.T01:CDS
TATGATCTTCTTCTTGTTGT+TGG 0.275831 3:-388711 None:intergenic
GGACTATCACCTGGCTCTGC+TGG 0.288932 3:+393441 MsG0380011494.01.T01:CDS
TGAGTTTCAGTAAAATAATA+AGG 0.289249 3:-393504 None:intergenic
AAATAAAGGAACGGTGAATT+AGG 0.294263 3:-388822 None:intergenic
CTAATTGTGTTCTTGTTACT+TGG 0.313146 3:+394965 MsG0380011494.01.T01:exon
TGACAAGAAGTTTGCCTTTG+TGG 0.314678 3:+393161 MsG0380011494.01.T01:CDS
GGTTAGGTTGGCTTGGCCCT+AGG 0.315523 3:-393395 None:intergenic
CTAAGCCCAGATTAAGGTTT+GGG 0.324353 3:-393416 None:intergenic
CTAGTGAAAGATAGAGAAAC+AGG 0.327721 3:+393573 MsG0380011494.01.T01:CDS
AACTTTCTTCAGTCAGGTTA+TGG 0.329007 3:+393077 MsG0380011494.01.T01:CDS
GTCCAACTAAGCCCAGATTA+AGG 0.333587 3:-393422 None:intergenic
GACTATCACCTGGCTCTGCT+GGG 0.339084 3:+393442 MsG0380011494.01.T01:CDS
GTACTTGCAGGTCAGATCTC+TGG 0.343612 3:+392382 MsG0380011494.01.T01:intron
ACCTAACCCAAACCTTAATC+TGG 0.348497 3:+393410 MsG0380011494.01.T01:CDS
GGGGCAAGTCCTGCTATTCC+TGG 0.350763 3:+392403 MsG0380011494.01.T01:CDS
GGTTCTACCAAAGCCCGTTC+TGG 0.352285 3:+394858 MsG0380011494.01.T01:CDS
AGAGAAAAGGAGCGGGAGAA+TGG 0.360404 3:+390006 MsG0380011494.01.T01:CDS
ATGCTCTCTTGTTCAGGTTT+AGG 0.362273 3:-393735 None:intergenic
GCAGGGACAGGGTCAGAGAT+AGG 0.363846 3:+390124 MsG0380011494.01.T01:CDS
TACTTGCAGGTCAGATCTCT+GGG 0.364212 3:+392383 MsG0380011494.01.T01:intron
GAGAAAAGGAGCGGGAGAAT+GGG 0.371959 3:+390007 MsG0380011494.01.T01:CDS
TTGGGTGCTACTGGTGTTGC+AGG 0.372909 3:+391667 MsG0380011494.01.T01:CDS
TGTTCAGGTTTAGGCTGCAT+TGG 0.376618 3:-393726 None:intergenic
TCTCCCTGTCTTGCCAGTTC+AGG 0.382609 3:+392562 MsG0380011494.01.T01:CDS
AAAGGGATAAGGGAAGAGAC+AGG 0.384703 3:+390046 MsG0380011494.01.T01:CDS
CCCTGAGCAAATTTGTTCTC+TGG 0.391081 3:-394930 None:intergenic
ATTAAAATGCTCTCTTGTTC+AGG 0.391630 3:-393741 None:intergenic
GTTCAGGTTTAGGCTGCATT+GGG 0.392860 3:-393725 None:intergenic
AACATATTTGGAAACATTCC+AGG 0.392880 3:-392421 None:intergenic
TTGGAGTATGCTGATGTTGA+TGG 0.396211 3:+394837 MsG0380011494.01.T01:CDS
AGCCAGCAATGCAATGGCTT+TGG 0.400570 3:+393203 MsG0380011494.01.T01:CDS
TCAGAGATAGGGAGAGAAGC+AGG 0.402248 3:+390136 MsG0380011494.01.T01:CDS
TCATCATCTTTGAGCTCATC+AGG 0.405363 3:-393951 None:intergenic
GTTTCCCCTGCCTACAAATC+AGG 0.406555 3:+392441 MsG0380011494.01.T01:CDS
ACAGAGAGAGTGAGAGAAGC+AGG 0.408072 3:+390106 MsG0380011494.01.T01:CDS
TCAACAGGTGGTGGTGGTGG+TGG 0.412949 3:-388760 None:intergenic
TTTATTCAAGATTTATATGC+AGG 0.413958 3:+394996 MsG0380011494.01.T01:three_prime_UTR
AGTCAGGTTATGGCTACAAT+TGG 0.415102 3:+393087 MsG0380011494.01.T01:CDS
CCGTCTCTAGCTGCTGCCCT+AGG 0.416793 3:+393378 MsG0380011494.01.T01:CDS
AGTTGCAACTTTCTTCAGTC+AGG 0.418446 3:+393071 MsG0380011494.01.T01:CDS
TCACCATCAGGCCGTGGGCG+AGG 0.421457 3:-394254 None:intergenic
TCCAGAGAACAAATTTGCTC+AGG 0.424734 3:+394929 MsG0380011494.01.T01:CDS
ATAGGGAGAGAAGCAGGGAC+AGG 0.428035 3:+390142 MsG0380011494.01.T01:CDS
TCTTCCATTCAGTCCAGAAC+GGG 0.431470 3:-394871 None:intergenic
ACTAAGCCCAGATTAAGGTT+TGG 0.432382 3:-393417 None:intergenic
GTTAGGTTGGCTTGGCCCTA+GGG 0.433054 3:-393394 None:intergenic
ACCTTTGTTGCCACCAATGC+TGG 0.434466 3:-393903 None:intergenic
AACCTTAATCTGGGCTTAGT+TGG 0.436600 3:+393420 MsG0380011494.01.T01:CDS
GCGGGAGAATGGGAGAGAAA+AGG 0.437926 3:+390017 MsG0380011494.01.T01:CDS
ATAGGGATAGGGAGAAAAGC+AGG 0.441332 3:+390082 MsG0380011494.01.T01:CDS
ACAGGGAACGCGATCGGGAT+GGG 0.441548 3:+390190 MsG0380011494.01.T01:CDS
GTGAGATCTTCTTCATCAAC+AGG 0.443011 3:-388775 None:intergenic
ATAGCCTGAACTGGCAAGAC+AGG 0.443744 3:-392566 None:intergenic
GTGAGAGAAAGGAAAGGGTA+AGG 0.445978 3:+390274 MsG0380011494.01.T01:CDS
CAAAGACAGGGAACGCGATC+GGG 0.446135 3:+390185 MsG0380011494.01.T01:CDS
AAAATACCTGATTTGTAGGC+AGG 0.446527 3:-392447 None:intergenic
CCCAGATTAAGGTTTGGGTT+AGG 0.447397 3:-393411 None:intergenic
AGGTTTGGGTTAGGTTGGCT+TGG 0.448251 3:-393402 None:intergenic
TCATCAACAGGTGGTGGTGG+TGG 0.453350 3:-388763 None:intergenic
ATTCAGTCCAGAACGGGCTT+TGG 0.457567 3:-394865 None:intergenic
TCTAATACAATAATAATACT+TGG 0.461918 3:+395109 MsG0380011494.01.T01:three_prime_UTR
ATCCCTCGCCCACGGCCTGA+TGG 0.463255 3:+394251 MsG0380011494.01.T01:CDS
AAATACGTTGGATTTGGAAT+CGG 0.463999 3:-388797 None:intergenic
ATAGAAGCAGGGATAGGGAT+AGG 0.464430 3:+390070 MsG0380011494.01.T01:CDS
AGGGTGCACCAGTGAAGGTC+AGG 0.465241 3:+393337 MsG0380011494.01.T01:intron
CAGGGAACGCGATCGGGATG+GGG 0.465625 3:+390191 MsG0380011494.01.T01:CDS
AAGCAAACCTTTCCAACTCC+AGG 0.469840 3:-394284 None:intergenic
CCTGATGGTGAACTGTGCCC+TGG 0.472461 3:+394266 MsG0380011494.01.T01:CDS
GCAAAGACAGGGAACGCGAT+CGG 0.473825 3:+390184 MsG0380011494.01.T01:CDS
CACAGTTCACCATCAGGCCG+TGG 0.474395 3:-394260 None:intergenic
GATTAAGGTTTGGGTTAGGT+TGG 0.474494 3:-393407 None:intergenic
TATTCCATTGAGAGCTGCAC+AGG 0.475165 3:-393652 None:intergenic
AGAGTGAGAGAAGCAGGGAC+AGG 0.475476 3:+390112 MsG0380011494.01.T01:CDS
ACGCGATCGGGATGGGGAGA+AGG 0.475708 3:+390197 MsG0380011494.01.T01:CDS
CACCATCAGGCCGTGGGCGA+GGG 0.476970 3:-394253 None:intergenic
ATCGGGATGGGGAGAAGGAA+AGG 0.478929 3:+390202 MsG0380011494.01.T01:CDS
ATTGCCTGTGCAGCTCTCAA+TGG 0.480717 3:+393648 MsG0380011494.01.T01:CDS
ATCCTCCAGAAGTAGAGAAA+AGG 0.482000 3:+389993 MsG0380011494.01.T01:CDS
GGAGGAAACACCGCTGGTCC+AGG 0.482975 3:+393108 MsG0380011494.01.T01:CDS
ACAGGGATAGAAGCAGGGAT+AGG 0.486106 3:+390064 MsG0380011494.01.T01:CDS
GAAGAGACAGGGATAGAAGC+AGG 0.487067 3:+390058 MsG0380011494.01.T01:CDS
TCTTCATCAACAGGTGGTGG+TGG 0.488161 3:-388766 None:intergenic
CCAGGGCACAGTTCACCATC+AGG 0.489395 3:-394266 None:intergenic
GTAGGTCTCCTGACCTTCAC+TGG 0.489485 3:-393345 None:intergenic
ATGGGGAGAAGGAAAGGGAG+AGG 0.489505 3:+390208 MsG0380011494.01.T01:CDS
TAGAAGCAGGGATAGGGATA+GGG 0.492088 3:+390071 MsG0380011494.01.T01:CDS
ACAGCAGCAGATTGCTCTGC+AGG 0.492821 3:+393770 MsG0380011494.01.T01:CDS
CTCTATGATGGTCACGGTCA+CGG 0.497953 3:-390233 None:intergenic
CACCCAATATCGCAGAAGTA+GGG 0.498077 3:-391651 None:intergenic
ATAGTGAGAAAAGCAAAGAC+AGG 0.498726 3:+390172 MsG0380011494.01.T01:CDS
GTTCTCGTTCACGCTCCAAA+AGG 0.501480 3:+390642 MsG0380011494.01.T01:CDS
TCTGCGATATTGGGTGCTAC+TGG 0.502664 3:+391658 MsG0380011494.01.T01:CDS
GGAAACATTCCAGGAATAGC+AGG 0.503610 3:-392412 None:intergenic
ATTAGAACAAATCCTCCATC+AGG 0.508317 3:-395092 None:intergenic
TGTTGTGTCATAGCCTGAAC+TGG 0.509316 3:-392575 None:intergenic
CAGGGACAGGGTCAGAGATA+GGG 0.509318 3:+390125 MsG0380011494.01.T01:CDS
CAGGTTATGGCTACAATTGG+AGG 0.509339 3:+393090 MsG0380011494.01.T01:CDS
TAGGGAGAGAAGCAGGGACA+GGG 0.509753 3:+390143 MsG0380011494.01.T01:CDS
AGTTTGCCTTTGTGGAAATG+AGG 0.514390 3:+393169 MsG0380011494.01.T01:CDS
CAGGGATCGTAGTGAGAGAA+AGG 0.516139 3:+390263 MsG0380011494.01.T01:CDS
CAGGGATAGAAGCAGGGATA+GGG 0.516826 3:+390065 MsG0380011494.01.T01:CDS
GCACCCAATATCGCAGAAGT+AGG 0.517661 3:-391652 None:intergenic
TCGGGATGGGGAGAAGGAAA+GGG 0.521356 3:+390203 MsG0380011494.01.T01:CDS
TTTGCTCAGGGCGATTATGA+AGG 0.523159 3:+394942 MsG0380011494.01.T01:CDS
GGCTTAGTTGGACTATCACC+TGG 0.524073 3:+393432 MsG0380011494.01.T01:CDS
TATGTTACAACCAGCATTGG+TGG 0.524223 3:+393893 MsG0380011494.01.T01:CDS
CTCTCCTACAGCTAATGAGC+AGG 0.525438 3:+392744 MsG0380011494.01.T01:CDS
AGTTCAGGCTATGACACAAC+AGG 0.528917 3:+392577 MsG0380011494.01.T01:CDS
GGTGAACTGTGCCCTGGAGT+TGG 0.530525 3:+394272 MsG0380011494.01.T01:CDS
GGATTTCTAATGAATTATTG+TGG 0.530896 3:+395033 MsG0380011494.01.T01:three_prime_UTR
AAAGCCCGTTCTGGACTGAA+TGG 0.531994 3:+394867 MsG0380011494.01.T01:CDS
ATGATCGAGAGGATAGGCAT+AGG 0.534779 3:+390555 MsG0380011494.01.T01:CDS
GATTCTTGATGATATGCGAC+AGG 0.535785 3:+393986 MsG0380011494.01.T01:CDS
AGAGAAACAGGGAATTCAAA+GGG 0.536945 3:+393585 MsG0380011494.01.T01:CDS
TCGTAGTGAGAGAAAGGAAA+GGG 0.539193 3:+390269 MsG0380011494.01.T01:CDS
ACTTATGTTACAACCAGCAT+TGG 0.539237 3:+393890 MsG0380011494.01.T01:CDS
AATTCAGGGTGCACCAGTGA+AGG 0.539964 3:+393332 MsG0380011494.01.T01:intron
CGTCTCTAGCTGCTGCCCTA+GGG 0.541292 3:+393379 MsG0380011494.01.T01:CDS
GACAGGGAACGCGATCGGGA+TGG 0.543148 3:+390189 MsG0380011494.01.T01:CDS
CCCTGTGGCGATCTCTATGA+TGG 0.547978 3:-390245 None:intergenic
AGGGAGAGAAGCAGGGACAG+GGG 0.548129 3:+390144 MsG0380011494.01.T01:CDS
ACTATCACCTGGCTCTGCTG+GGG 0.549414 3:+393443 MsG0380011494.01.T01:CDS
CTCGATCTAGATCAAGGTCA+AGG 0.550814 3:+390591 MsG0380011494.01.T01:CDS
GGGGACTTGATGGTCCTGAT+CGG 0.551785 3:+393463 MsG0380011494.01.T01:CDS
CAGAAGTAGAGAAAAGGAGC+GGG 0.551899 3:+389999 MsG0380011494.01.T01:CDS
CTATCACCTGGCTCTGCTGG+GGG 0.554838 3:+393444 MsG0380011494.01.T01:CDS
AAATACCTGATTTGTAGGCA+GGG 0.555176 3:-392446 None:intergenic
TGAGAGAAAGGAAAGGGTAA+GGG 0.556831 3:+390275 MsG0380011494.01.T01:CDS
CAAAGGCAAACTTCTTGTCA+TGG 0.559361 3:-393158 None:intergenic
ACATTCACAACTGCATCACC+TGG 0.561956 3:-393126 None:intergenic
GGCTACACGACATGCTAGAC+GGG 0.562074 3:+392705 MsG0380011494.01.T01:intron
CCTAACCCAAACCTTAATCT+GGG 0.564603 3:+393411 MsG0380011494.01.T01:CDS
TTCTTCCATTCAGTCCAGAA+CGG 0.564603 3:-394872 None:intergenic
TGGGGAGAAGGAAAGGGAGA+GGG 0.564967 3:+390209 MsG0380011494.01.T01:CDS
TAGAGAAACAGGGAATTCAA+AGG 0.566427 3:+393584 MsG0380011494.01.T01:CDS
TGTTTGTTGGTATAGACGAA+GGG 0.568551 3:+390529 MsG0380011494.01.T01:intron
AGCAATGCAATGGCTTTGGA+TGG 0.568787 3:+393207 MsG0380011494.01.T01:CDS
ACAGAAGCCGAGGCTATGAC+AGG 0.570049 3:+390319 MsG0380011494.01.T01:CDS
GCCGGTCTCGATCTAGATCA+AGG 0.570517 3:+390585 MsG0380011494.01.T01:CDS
ACCAGCATTGGTGGCAACAA+AGG 0.576598 3:+393902 MsG0380011494.01.T01:CDS
AAGACAGGGAGAGCACTAAA+CGG 0.578187 3:-392551 None:intergenic
TGATGAGCTCAAAGATGATG+AGG 0.579099 3:+393953 MsG0380011494.01.T01:CDS
AATACCTGATTTGTAGGCAG+GGG 0.580602 3:-392445 None:intergenic
ATGTGGTGATCCCTCGCCCA+CGG 0.581857 3:+394243 MsG0380011494.01.T01:CDS
CTGAATGGAAGAAAATTTGG+TGG 0.582325 3:+394882 MsG0380011494.01.T01:CDS
CCAGAGAACAAATTTGCTCA+GGG 0.582597 3:+394930 MsG0380011494.01.T01:CDS
TGCAGGTAATTTGGTTAATG+TGG 0.583315 3:+394226 MsG0380011494.01.T01:intron
ACCTTGATCTAGATCGAGAC+CGG 0.584536 3:-390586 None:intergenic
GAGTGAGAGAAGCAGGGACA+GGG 0.585097 3:+390113 MsG0380011494.01.T01:CDS
TCTTCTTCATCAACAGGTGG+TGG 0.585996 3:-388769 None:intergenic
GGGAGTATGATCGAGAGGAT+AGG 0.586837 3:+390549 MsG0380011494.01.T01:CDS
GGCGATCTCTATGATGGTCA+CGG 0.587032 3:-390239 None:intergenic
TTATTCAAGATTTATATGCA+GGG 0.587387 3:+394997 MsG0380011494.01.T01:three_prime_UTR
ATCGTAGTGAGAGAAAGGAA+AGG 0.592512 3:+390268 MsG0380011494.01.T01:CDS
CCTAGGGCAGCAGCTAGAGA+CGG 0.592863 3:-393378 None:intergenic
ACCATCATAGAGATCGCCAC+AGG 0.594034 3:+390244 MsG0380011494.01.T01:CDS
CTCGATCTGAGCATAGATCA+AGG 0.594382 3:+390615 MsG0380011494.01.T01:CDS
AACTGCATCACCTGGACCAG+CGG 0.595274 3:-393118 None:intergenic
AAGGGATAAGGGAAGAGACA+GGG 0.599153 3:+390047 MsG0380011494.01.T01:CDS
ACTTACAGCAAAAGGACTAG+TGG 0.602947 3:+391613 MsG0380011494.01.T01:intron
ATTACCTGCTCATTAGCTGT+AGG 0.603989 3:-392748 None:intergenic
GCTAGACGGGTGTATGTTGG+TGG 0.606173 3:+392718 MsG0380011494.01.T01:CDS
ACCCAATATCGCAGAAGTAG+GGG 0.606263 3:-391650 None:intergenic
CAGAGATAGGGAGAGAAGCA+GGG 0.607054 3:+390137 MsG0380011494.01.T01:CDS
ACAGTTCACCATCAGGCCGT+GGG 0.609862 3:-394259 None:intergenic
AGGCTACACGACATGCTAGA+CGG 0.614733 3:+392704 MsG0380011494.01.T01:intron
TGAAGAAGCCAGCAATGCAA+TGG 0.615892 3:+393197 MsG0380011494.01.T01:CDS
ACAATTGGAGGAAACACCGC+TGG 0.618666 3:+393102 MsG0380011494.01.T01:CDS
AGCAAACCTTTCCAACTCCA+GGG 0.618687 3:-394283 None:intergenic
CCCAATATCGCAGAAGTAGG+GGG 0.619164 3:-391649 None:intergenic
GAGAGGATAGGCATAGGAGT+AGG 0.619167 3:+390561 MsG0380011494.01.T01:CDS
TCAGCTGGAATAGCACCTGA+TGG 0.621294 3:+395077 MsG0380011494.01.T01:three_prime_UTR
CAGAGAGAGTGAGAGAAGCA+GGG 0.625664 3:+390107 MsG0380011494.01.T01:CDS
ACTGTGCCCTGGAGTTGGAA+AGG 0.629409 3:+394277 MsG0380011494.01.T01:CDS
CATGCTAGACGGGTGTATGT+TGG 0.630630 3:+392715 MsG0380011494.01.T01:CDS
AAGAGACAGGGATAGAAGCA+GGG 0.631073 3:+390059 MsG0380011494.01.T01:CDS
GCTCATTAGCTGTAGGAGAG+AGG 0.632892 3:-392741 None:intergenic
TCGATCTAGATCAAGGTCAA+GGG 0.634343 3:+390592 MsG0380011494.01.T01:CDS
TAGGGATAGGGAGAAAAGCA+GGG 0.634757 3:+390083 MsG0380011494.01.T01:CDS
GCTGGAATAGCACCTGATGG+AGG 0.636746 3:+395080 MsG0380011494.01.T01:three_prime_UTR
ACGAAGGGAGTATGATCGAG+AGG 0.637703 3:+390544 MsG0380011494.01.T01:CDS
TAGCCTGAACTGGCAAGACA+GGG 0.642494 3:-392565 None:intergenic
AACAGACCTCATTTCCACAA+AGG 0.649507 3:-393175 None:intergenic
TAGTGAGAAAAGCAAAGACA+GGG 0.650122 3:+390173 MsG0380011494.01.T01:CDS
ACTAGATCAAAACCCCGAAG+AGG 0.652640 3:-393555 None:intergenic
GATGATTATCACAGAAGCCG+AGG 0.655256 3:+390309 MsG0380011494.01.T01:CDS
CCAGAAGTAGAGAAAAGGAG+CGG 0.658550 3:+389998 MsG0380011494.01.T01:CDS
AGATCTTCTTCATCAACAGG+TGG 0.670030 3:-388772 None:intergenic
AGAGACGGATTATAATCAGT+AGG 0.689160 3:-393363 None:intergenic
TTCTCTCACTACGATCCCTG+TGG 0.694836 3:-390260 None:intergenic
CCATCATAGAGATCGCCACA+GGG 0.695430 3:+390245 MsG0380011494.01.T01:CDS
ATAGGCATAGGAGTAGGCGC+CGG 0.701001 3:+390567 MsG0380011494.01.T01:CDS
TAGTGAAAGATAGAGAAACA+GGG 0.705460 3:+393574 MsG0380011494.01.T01:CDS
ACTTGCAGGTCAGATCTCTG+GGG 0.748107 3:+392384 MsG0380011494.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAGATAATAAATAAATAT+TGG - Chr3:390507-390526 None:intergenic 10.0%
!!! ATTTTAAGATTTTTCATTTT+AGG + Chr3:389370-389389 MsG0380011494.01.T01:intron 10.0%
!!! ATTTTGAAAAGAAAAAAAAT+GGG + Chr3:394679-394698 MsG0380011494.01.T01:intron 10.0%
!!! GAATATTTTTTTTTGTTTTT+GGG + Chr3:394752-394771 MsG0380011494.01.T01:intron 10.0%
!!! TATTTTGAAAAGAAAAAAAA+TGG + Chr3:394678-394697 MsG0380011494.01.T01:intron 10.0%
!!! TGAATATTTTTTTTTGTTTT+TGG + Chr3:394751-394770 MsG0380011494.01.T01:intron 10.0%
!! AAAATTCATATCAAATTACA+TGG + Chr3:391780-391799 MsG0380011494.01.T01:intron 15.0%
!! AGAAGAAAAAAAAAAACAAT+AGG - Chr3:389812-389831 None:intergenic 15.0%
!! ATAAATATACATTCAACTAT+TGG + Chr3:391074-391093 MsG0380011494.01.T01:intron 15.0%
!! ATTCAAAATTTCTTATGTAA+AGG - Chr3:389724-389743 None:intergenic 15.0%
!! ATTCAATTGTATGATTAATT+AGG + Chr3:388953-388972 MsG0380011494.01.T01:intron 15.0%
!! CGATTATATATAATAAATTG+TGG + Chr3:394780-394799 MsG0380011494.01.T01:intron 15.0%
!! GATTTATGATTGATTAATTA+GGG + Chr3:388991-389010 MsG0380011494.01.T01:intron 15.0%
!! GTTATAATTGAATTTCAATT+CGG - Chr3:388883-388902 None:intergenic 15.0%
!! TCTAATACAATAATAATACT+TGG + Chr3:395109-395128 MsG0380011494.01.T01:three_prime_UTR 15.0%
!! TGAATAGAAATTATAACAAT+TGG - Chr3:390471-390490 None:intergenic 15.0%
!! TGATTGAAATTGAAAAATAA+AGG - Chr3:388839-388858 None:intergenic 15.0%
!! TGATTTATGATTGATTAATT+AGG + Chr3:388990-389009 MsG0380011494.01.T01:intron 15.0%
!! TTCAAAATTTCTTATGTAAA+GGG - Chr3:389723-389742 None:intergenic 15.0%
!! TTCAATTGTATGATTAATTA+GGG + Chr3:388954-388973 MsG0380011494.01.T01:intron 15.0%
!! TTCATTATTTCAAATTTCAT+AGG + Chr3:391425-391444 MsG0380011494.01.T01:intron 15.0%
!!! ATTTGAAATAATGAATATAC+AGG - Chr3:391420-391439 None:intergenic 15.0%
!!! GTAATTTCATTTTTAATTCA+GGG + Chr3:393318-393337 MsG0380011494.01.T01:intron 15.0%
!!! TAATTTAACCTTTTAATGTA+AGG + Chr3:391349-391368 MsG0380011494.01.T01:intron 15.0%
!!! TGTAATTTCATTTTTAATTC+AGG + Chr3:393317-393336 MsG0380011494.01.T01:intron 15.0%
!!! TTAATGTTTTGTTTGTTTTT+TGG + Chr3:389935-389954 MsG0380011494.01.T01:intron 15.0%
!!! TTTGAAATAATGAATATACA+GGG - Chr3:391419-391438 None:intergenic 15.0%
!!! TTTTAAAGTTTTGCAATTTT+AGG + Chr3:389157-389176 MsG0380011494.01.T01:intron 15.0%
!!! TTTTCAATTTCAATCAATTA+GGG + Chr3:388843-388862 MsG0380011494.01.T01:CDS 15.0%
!!! TTTTTCAATTTCAATCAATT+AGG + Chr3:388842-388861 MsG0380011494.01.T01:CDS 15.0%
!! AAAATTATAATATAGCAGTG+AGG + Chr3:392230-392249 MsG0380011494.01.T01:intron 20.0%
!! AAACAAACAAAACATTAACA+AGG - Chr3:389933-389952 None:intergenic 20.0%
!! AACAAACAAAACATTAACAA+GGG - Chr3:389932-389951 None:intergenic 20.0%
!! AACACAAAAATTACCAAATT+TGG - Chr3:394018-394037 None:intergenic 20.0%
!! AATGAGTTAAACACATAAAT+TGG - Chr3:394556-394575 None:intergenic 20.0%
!! ACATGAAAACTGTAATAAAA+TGG - Chr3:390856-390875 None:intergenic 20.0%
!! ACCAAAATTTCTATTTGAAA+AGG - Chr3:389446-389465 None:intergenic 20.0%
!! ATCCAACACAAATAAAAAAT+GGG - Chr3:391500-391519 None:intergenic 20.0%
!! ATTATTTCAAATTTCATAGG+TGG + Chr3:391428-391447 MsG0380011494.01.T01:intron 20.0%
!! CCAAAATTTCTATTTGAAAA+GGG - Chr3:389445-389464 None:intergenic 20.0%
!! GAAATTGAAAAATAAAGGAA+CGG - Chr3:388834-388853 None:intergenic 20.0%
!! GTAATATTCCTTACATTAAA+AGG - Chr3:391360-391379 None:intergenic 20.0%
!! TAAAAGACTGAAAATTATGA+AGG - Chr3:394140-394159 None:intergenic 20.0%
!! TAGAGAATTTCCAAAATAAT+AGG - Chr3:394315-394334 None:intergenic 20.0%
!! TATCACAATTGTTTCAATTT+CGG + Chr3:389472-389491 MsG0380011494.01.T01:intron 20.0%
!! TATTATCTAACATTGTTTGT+TGG + Chr3:390516-390535 MsG0380011494.01.T01:intron 20.0%
!! TCATATAACTTTACAATTTC+TGG + Chr3:389209-389228 MsG0380011494.01.T01:intron 20.0%
!! TGAGTTTCAGTAAAATAATA+AGG - Chr3:393507-393526 None:intergenic 20.0%
!! TTATTCAAGATTTATATGCA+GGG + Chr3:394997-395016 MsG0380011494.01.T01:three_prime_UTR 20.0%
!! TTTATTCAAGATTTATATGC+AGG + Chr3:394996-395015 MsG0380011494.01.T01:three_prime_UTR 20.0%
!!! AGAACTTGAAATTTTACAAA+TGG - Chr3:390732-390751 None:intergenic 20.0%
!!! CACTGTTCATTATAAAATTT+TGG + Chr3:391278-391297 MsG0380011494.01.T01:intron 20.0%
!!! CATTTTTGTTTGTCTTTTTA+AGG + Chr3:392523-392542 MsG0380011494.01.T01:intron 20.0%
!!! TATTTTTGTTAGTGAATAGA+GGG + Chr3:389680-389699 MsG0380011494.01.T01:intron 20.0%
!!! TTATTTTTGTTAGTGAATAG+AGG + Chr3:389679-389698 MsG0380011494.01.T01:intron 20.0%
!!! TTCATTAAAATCGAACTTTT+TGG - Chr3:389654-389673 None:intergenic 20.0%
!!! TTTAGAATATTGATAACCTA+AGG + Chr3:389185-389204 MsG0380011494.01.T01:intron 20.0%
! AAAAAAGGGGGAAAAAAAAA+AGG - Chr3:391738-391757 None:intergenic 25.0%
! AAAGTATGAACAACTGATAA+GGG + Chr3:391393-391412 MsG0380011494.01.T01:intron 25.0%
! ACTCATGCACAAAAAATTTA+AGG - Chr3:393830-393849 None:intergenic 25.0%
! AGCAAAAAAATATCACTTGT+GGG + Chr3:389567-389586 MsG0380011494.01.T01:intron 25.0%
! ATAGAATTGCAAAAGATGAA+AGG + Chr3:392313-392332 MsG0380011494.01.T01:intron 25.0%
! ATCATCAAATTGGAAGATAT+GGG + Chr3:389898-389917 MsG0380011494.01.T01:intron 25.0%
! ATGTTTGGTACATCAAAAAA+AGG - Chr3:392682-392701 None:intergenic 25.0%
! CAAAATAAATAATGCAGCAT+TGG - Chr3:394665-394684 None:intergenic 25.0%
! CATCCAACACAAATAAAAAA+TGG - Chr3:391501-391520 None:intergenic 25.0%
! GGATTTCTAATGAATTATTG+TGG + Chr3:395033-395052 MsG0380011494.01.T01:three_prime_UTR 25.0%
! TAAAGTATGAACAACTGATA+AGG + Chr3:391392-391411 MsG0380011494.01.T01:intron 25.0%
! TAAATCTTATGGATCTTTCT+GGG - Chr3:390673-390692 None:intergenic 25.0%
! TAATCAAATTTGACCCTTTA+GGG + Chr3:389087-389106 MsG0380011494.01.T01:intron 25.0%
! TATCATCAAATTGGAAGATA+TGG + Chr3:389897-389916 MsG0380011494.01.T01:intron 25.0%
! TGTAAAGTTATATGAACCTT+AGG - Chr3:389204-389223 None:intergenic 25.0%
! TGTTTGGTACATCAAAAAAA+GGG - Chr3:392681-392700 None:intergenic 25.0%
! TTAATCAAATTTGACCCTTT+AGG + Chr3:389086-389105 MsG0380011494.01.T01:intron 25.0%
! TTATCAGTTGTTCATACTTT+AGG - Chr3:391393-391412 None:intergenic 25.0%
! TTCGTTCAACAAATAGTTAA+AGG + Chr3:390754-390773 MsG0380011494.01.T01:intron 25.0%
! TTTACTTAGTGATACAATTC+TGG + Chr3:391898-391917 MsG0380011494.01.T01:intron 25.0%
! TTTATTTACACAATATCTGC+AGG + Chr3:394209-394228 MsG0380011494.01.T01:intron 25.0%
!! AAGAAAAATACCTGATTTGT+AGG - Chr3:392454-392473 None:intergenic 25.0%
!! AGAAATTTTGAATTGCTAGA+TGG + Chr3:389731-389750 MsG0380011494.01.T01:intron 25.0%
!! ATATCCTTGATAATTTGATC+TGG + Chr3:390879-390898 MsG0380011494.01.T01:intron 25.0%
!! ATGCAGGGATTATTATATTT+TGG + Chr3:395012-395031 MsG0380011494.01.T01:three_prime_UTR 25.0%
!! CCCTTTTCAAATAGAAATTT+TGG + Chr3:389442-389461 MsG0380011494.01.T01:intron 25.0%
!! CTTCAACATTTTATGAAACA+TGG - Chr3:392872-392891 None:intergenic 25.0%
!! GAAGTATCTCTTAAAACTAA+AGG + Chr3:391316-391335 MsG0380011494.01.T01:intron 25.0%
!! TGATATGAATTTTCCATACT+AGG - Chr3:391773-391792 None:intergenic 25.0%
!! TGATGATGCATATAAAATGT+AGG - Chr3:389873-389892 None:intergenic 25.0%
!!! AAAGTTCGATTTTAATGAAG+AGG + Chr3:389655-389674 MsG0380011494.01.T01:intron 25.0%
!!! ACATAAATGTTTTATTCAGC+TGG + Chr3:395062-395081 MsG0380011494.01.T01:three_prime_UTR 25.0%
!!! ACTTTACAATTTCTGGTAAT+TGG + Chr3:389216-389235 MsG0380011494.01.T01:intron 25.0%
!!! AGAGAAAAAATGTCACTTTT+GGG - Chr3:389534-389553 None:intergenic 25.0%
!!! CTTTACAATTTCTGGTAATT+GGG + Chr3:389217-389236 MsG0380011494.01.T01:intron 25.0%
!!! GCATTAAGTTGGTATTATTA+GGG + Chr3:389129-389148 MsG0380011494.01.T01:intron 25.0%
!!! GTAAAAGTTATTTTCTGGTT+TGG + Chr3:390341-390360 MsG0380011494.01.T01:intron 25.0%
!!! TAGAGAAAAAATGTCACTTT+TGG - Chr3:389535-389554 None:intergenic 25.0%
!!! TATAAAATTTTGGAACTCCA+TGG + Chr3:391288-391307 MsG0380011494.01.T01:intron 25.0%
!!! TATCTTTTGACTATAACTGA+TGG + Chr3:393244-393263 MsG0380011494.01.T01:intron 25.0%
!!! TGCATTAAGTTGGTATTATT+AGG + Chr3:389128-389147 MsG0380011494.01.T01:intron 25.0%
!!! TGCTTTTTGACCTATTATTT+TGG + Chr3:394302-394321 MsG0380011494.01.T01:intron 25.0%
!!! TTCTTTTTTGCAGGTATTTT+TGG + Chr3:394818-394837 MsG0380011494.01.T01:intron 25.0%
!!! TTTGGATGGAATTATTTTTG+AGG + Chr3:393221-393240 MsG0380011494.01.T01:CDS 25.0%
AAAGACAAAATTACACACCA+AGG - Chr3:391875-391894 None:intergenic 30.0%
AAATAAAGGAACGGTGAATT+AGG - Chr3:388825-388844 None:intergenic 30.0%
AACATATTTGGAAACATTCC+AGG - Chr3:392424-392443 None:intergenic 30.0%
AAGACAAAATTACACACCAA+GGG - Chr3:391874-391893 None:intergenic 30.0%
ACGTCAAATTAGATATGTGT+TGG + Chr3:388901-388920 MsG0380011494.01.T01:intron 30.0%
AGATAAGTTTCAGTTACTAC+TGG + Chr3:391823-391842 MsG0380011494.01.T01:intron 30.0%
AGCTCTCAATGGAATAAAAA+TGG + Chr3:393659-393678 MsG0380011494.01.T01:CDS 30.0%
AGGAGTTTAATTCATATGCA+CGG - Chr3:394633-394652 None:intergenic 30.0%
ATACCTGCAAAAAAGAAAAC+AGG - Chr3:394815-394834 None:intergenic 30.0%
ATGGAAACTACATGACAAAT+AGG - Chr3:392853-392872 None:intergenic 30.0%
ATTAAAATGCTCTCTTGTTC+AGG - Chr3:393744-393763 None:intergenic 30.0%
ATTGCAAAAGATGAAAGGTA+TGG + Chr3:392318-392337 MsG0380011494.01.T01:intron 30.0%
ATTTCAAATTTCATAGGTGG+TGG + Chr3:391431-391450 MsG0380011494.01.T01:intron 30.0%
CAACACAAATAAAAAATGGG+TGG - Chr3:391497-391516 None:intergenic 30.0%
CAGAAAGATCCATAAGATTT+AGG + Chr3:390672-390691 MsG0380011494.01.T01:intron 30.0%
CATCACTGTTATCATCAAAT+TGG + Chr3:389888-389907 MsG0380011494.01.T01:intron 30.0%
CTAAATCTTATGGATCTTTC+TGG - Chr3:390674-390693 None:intergenic 30.0%
CTAATTGTGTTCTTGTTACT+TGG + Chr3:394965-394984 MsG0380011494.01.T01:exon 30.0%
GACAAATAGGCAATTTAGAA+GGG - Chr3:392840-392859 None:intergenic 30.0%
GAGCAAAAAAATATCACTTG+TGG + Chr3:389566-389585 MsG0380011494.01.T01:intron 30.0%
GATAAGTTTCAGTTACTACT+GGG + Chr3:391824-391843 MsG0380011494.01.T01:intron 30.0%
GCAAAAAAATATCACTTGTG+GGG + Chr3:389568-389587 MsG0380011494.01.T01:intron 30.0%
GCTCTCAATGGAATAAAAAT+GGG + Chr3:393660-393679 MsG0380011494.01.T01:CDS 30.0%
GGAATGTCAGAAATTACTTA+TGG + Chr3:394700-394719 MsG0380011494.01.T01:intron 30.0%
GGAGAATGTAAGATTACAAA+AGG - Chr3:394083-394102 None:intergenic 30.0%
GGGTAAATACTTGAATTGAT+CGG + Chr3:389011-389030 MsG0380011494.01.T01:intron 30.0%
GTGAATTAGGAAAAATACGT+TGG - Chr3:388812-388831 None:intergenic 30.0%
TAACATATAATGCATGTGCT+GGG + Chr3:390702-390721 MsG0380011494.01.T01:intron 30.0%
TAGGAAAAATACGTTGGATT+TGG - Chr3:388806-388825 None:intergenic 30.0%
TAGGGAAATCAATGCTAAAA+GGG - Chr3:392651-392670 None:intergenic 30.0%
TAGTGAAAGATAGAGAAACA+GGG + Chr3:393574-393593 MsG0380011494.01.T01:CDS 30.0%
TATTTGTGTTGGATGCTATT+AGG + Chr3:391506-391525 MsG0380011494.01.T01:intron 30.0%
TCAAAATGATCTTTCCATGT+TGG + Chr3:392781-392800 MsG0380011494.01.T01:intron 30.0%
TCAACGTAACTAATTTAGAG+TGG - Chr3:391021-391040 None:intergenic 30.0%
TCATCTATTGATCTTATGTG+AGG + Chr3:390399-390418 MsG0380011494.01.T01:intron 30.0%
TGACAAATAGGCAATTTAGA+AGG - Chr3:392841-392860 None:intergenic 30.0%
TTAGGGAAATCAATGCTAAA+AGG - Chr3:392652-392671 None:intergenic 30.0%
TTGACCAGATCAAATTATCA+AGG - Chr3:390886-390905 None:intergenic 30.0%
TTGAGAAAAAAACGATGAAG+AGG - Chr3:389288-389307 None:intergenic 30.0%
TTTGATCTACTTACAGCAAA+AGG + Chr3:391605-391624 MsG0380011494.01.T01:intron 30.0%
! AAATACGTTGGATTTGGAAT+CGG - Chr3:388800-388819 None:intergenic 30.0%
! CAACGTAACTAATTTAGAGT+GGG - Chr3:391020-391039 None:intergenic 30.0%
! CTTTTACATGCAATGTGATA+TGG + Chr3:389766-389785 MsG0380011494.01.T01:intron 30.0%
! GATTCTTGTGATTTGAGTTT+AGG + Chr3:392934-392953 MsG0380011494.01.T01:intron 30.0%
! TATGATCTTCTTCTTGTTGT+TGG - Chr3:388714-388733 None:intergenic 30.0%
! TTGCAAAAGATGAAAGGTAT+GGG + Chr3:392319-392338 MsG0380011494.01.T01:intron 30.0%
! TTTCTTTTTGTTCCCAATTC+TGG + Chr3:392468-392487 MsG0380011494.01.T01:intron 30.0%
! TTTGAGTTTAGGAAGCAATT+AGG + Chr3:392945-392964 MsG0380011494.01.T01:intron 30.0%
! TTTTGATGTACCAAACATGT+AGG + Chr3:392684-392703 MsG0380011494.01.T01:intron 30.0%
!! GACAGGTAAAAGTTATTTTC+TGG + Chr3:390336-390355 MsG0380011494.01.T01:intron 30.0%
!! GATACAATTCTGGAACTAAA+TGG + Chr3:391908-391927 MsG0380011494.01.T01:intron 30.0%
!! GTATGGTGGGATTATTATTT+TGG + Chr3:393792-393811 MsG0380011494.01.T01:intron 30.0%
!!! AGTTTTGTTTGTGCTACTTT+TGG + Chr3:393010-393029 MsG0380011494.01.T01:intron 30.0%
!!! CACCCATTTTTTATTTGTGT+TGG + Chr3:391495-391514 MsG0380011494.01.T01:intron 30.0%
!!! GAGAAAAAATGTCACTTTTG+GGG - Chr3:389533-389552 None:intergenic 30.0%
!!! TTGGTTTTTTGTCTTGTGTT+TGG + Chr3:391935-391954 MsG0380011494.01.T01:intron 30.0%
!!! TTTTTTTCCCCCTTTTTTGT+TGG + Chr3:391740-391759 MsG0380011494.01.T01:intron 30.0%
AAACTTAGGCCTGATTCTTT+AGG - Chr3:394106-394125 None:intergenic 35.0%
AAAGGAGAGAAAAAGGGATA+AGG + Chr3:390035-390054 MsG0380011494.01.T01:CDS 35.0%
AACTTAGGCCTGATTCTTTA+GGG - Chr3:394105-394124 None:intergenic 35.0%
AACTTTCTTCAGTCAGGTTA+TGG + Chr3:393077-393096 MsG0380011494.01.T01:CDS 35.0%
AAGGAGAGAAAAAGGGATAA+GGG + Chr3:390036-390055 MsG0380011494.01.T01:CDS 35.0%
ACACATACCAAGTTCTCAAA+AGG - Chr3:391155-391174 None:intergenic 35.0%
ACTTATGTTACAACCAGCAT+TGG + Chr3:393890-393909 MsG0380011494.01.T01:CDS 35.0%
AGAGAAACAGGGAATTCAAA+GGG + Chr3:393585-393604 MsG0380011494.01.T01:CDS 35.0%
AGGATCAACACCAACAAAAA+AGG - Chr3:391753-391772 None:intergenic 35.0%
ATAAATTGGCATACTCGCTT+CGG - Chr3:394542-394561 None:intergenic 35.0%
ATAGTGAGAAAAGCAAAGAC+AGG + Chr3:390172-390191 MsG0380011494.01.T01:CDS 35.0%
ATCAACACCAACAAAAAAGG+GGG - Chr3:391750-391769 None:intergenic 35.0%
ATTAGAACAAATCCTCCATC+AGG - Chr3:395095-395114 None:intergenic 35.0%
CAAACATACTCAACACACAT+TGG - Chr3:391241-391260 None:intergenic 35.0%
CAATGTGTGTTGAGTATGTT+TGG + Chr3:391239-391258 MsG0380011494.01.T01:intron 35.0%
CACAATATCTGCAGGTAATT+TGG + Chr3:394217-394236 MsG0380011494.01.T01:intron 35.0%
CATGGTCTTTACTGTTTACT+TGG + Chr3:391798-391817 MsG0380011494.01.T01:intron 35.0%
CTAACATATAATGCATGTGC+TGG + Chr3:390701-390720 MsG0380011494.01.T01:intron 35.0%
CTAGTGAAAGATAGAGAAAC+AGG + Chr3:393573-393592 MsG0380011494.01.T01:CDS 35.0%
CTGAATGGAAGAAAATTTGG+TGG + Chr3:394882-394901 MsG0380011494.01.T01:CDS 35.0%
CTGGAAACTATTACCTACTT+CGG + Chr3:392119-392138 MsG0380011494.01.T01:intron 35.0%
GAAATCAATGCTAAAAGGGA+AGG - Chr3:392647-392666 None:intergenic 35.0%
GAATTGATCGGTGAAATTGT+AGG + Chr3:389023-389042 MsG0380011494.01.T01:intron 35.0%
GACATAAAAGCTACAGATGT+CGG - Chr3:392050-392069 None:intergenic 35.0%
GAGAGAAAAGGAGAGAAAAA+GGG + Chr3:390029-390048 MsG0380011494.01.T01:CDS 35.0%
GATCAACACCAACAAAAAAG+GGG - Chr3:391751-391770 None:intergenic 35.0%
GATGTGACAACACACATAAT+TGG + Chr3:394580-394599 MsG0380011494.01.T01:intron 35.0%
GCACCAAATGTGATATTTGA+AGG + Chr3:389627-389646 MsG0380011494.01.T01:intron 35.0%
GGACTGAATGGAAGAAAATT+TGG + Chr3:394879-394898 MsG0380011494.01.T01:CDS 35.0%
GGATCAACACCAACAAAAAA+GGG - Chr3:391752-391771 None:intergenic 35.0%
GGTATATAGCTCTTGAATAC+TGG + Chr3:391845-391864 MsG0380011494.01.T01:intron 35.0%
GGTCCTTCAAATATCACATT+TGG - Chr3:389633-389652 None:intergenic 35.0%
GTTCGAAGAACATTTACTGT+CGG - Chr3:391193-391212 None:intergenic 35.0%
GTTTGTCCTTCAGGAAATAA+TGG + Chr3:394385-394404 MsG0380011494.01.T01:intron 35.0%
TAATGTTGTGTGAATGCATG+TGG + Chr3:390798-390817 MsG0380011494.01.T01:intron 35.0%
TAGAGAAACAGGGAATTCAA+AGG + Chr3:393584-393603 MsG0380011494.01.T01:CDS 35.0%
TAGTGAGAAAAGCAAAGACA+GGG + Chr3:390173-390192 MsG0380011494.01.T01:CDS 35.0%
TAGTGCACACCTAAATCTTA+TGG - Chr3:390684-390703 None:intergenic 35.0%
TAGTTAAGTGAAGAACACGT+TGG + Chr3:392971-392990 MsG0380011494.01.T01:intron 35.0%
TATGACACAACAGGTAAAAG+AGG + Chr3:392586-392605 MsG0380011494.01.T01:intron 35.0%
TGCAGGTAATTTGGTTAATG+TGG + Chr3:394226-394245 MsG0380011494.01.T01:intron 35.0%
TTCTCATTCATGAACCAACA+TGG - Chr3:392798-392817 None:intergenic 35.0%
TTGAGTCTTAACAGTGCTAT+TGG + Chr3:391129-391148 MsG0380011494.01.T01:intron 35.0%
TTTGAATTGCTAGATGGTTG+TGG + Chr3:389737-389756 MsG0380011494.01.T01:intron 35.0%
! AAAATACCTGATTTGTAGGC+AGG - Chr3:392450-392469 None:intergenic 35.0%
! AAATACCTGATTTGTAGGCA+GGG - Chr3:392449-392468 None:intergenic 35.0%
! ATCTGTAGCTTTTATGTCCA+AGG + Chr3:392052-392071 MsG0380011494.01.T01:intron 35.0%
! ATTCTCTACTCTTTTGTCTC+TGG + Chr3:394327-394346 MsG0380011494.01.T01:intron 35.0%
! TGTTTGTTGGTATAGACGAA+GGG + Chr3:390529-390548 MsG0380011494.01.T01:intron 35.0%
! TTGTTTGTTGGTATAGACGA+AGG + Chr3:390528-390547 MsG0380011494.01.T01:intron 35.0%
!! AATAATGCAGCATTGGCAAT+AGG - Chr3:394658-394677 None:intergenic 35.0%
!! AGAGACGGATTATAATCAGT+AGG - Chr3:393366-393385 None:intergenic 35.0%
!! AGAGAGCTTTTAGAGACTTT+TGG + Chr3:393531-393550 MsG0380011494.01.T01:CDS 35.0%
!! GAACCTGTTTTCTTTTTTGC+AGG + Chr3:394809-394828 MsG0380011494.01.T01:intron 35.0%
!! TCTTGTCTTATGCTCTAAGA+AGG + Chr3:391980-391999 MsG0380011494.01.T01:intron 35.0%
!! TGTTGGTTCATGAATGAGAA+TGG + Chr3:392798-392817 MsG0380011494.01.T01:intron 35.0%
!!! AAGGACTAGTGGTTTTGATA+TGG + Chr3:391624-391643 MsG0380011494.01.T01:CDS 35.0%
!!! AGCTTTTTAGAGTATGTTGC+TGG + Chr3:392890-392909 MsG0380011494.01.T01:intron 35.0%
!!! TTGTTTGTTTTTTGGCAGCA+TGG + Chr3:389943-389962 MsG0380011494.01.T01:intron 35.0%
AACAGACCTCATTTCCACAA+AGG - Chr3:393178-393197 None:intergenic 40.0%
AACCTTAATCTGGGCTTAGT+TGG + Chr3:393420-393439 MsG0380011494.01.T01:CDS 40.0%
AACGATGAAGAGGATTCATC+AGG - Chr3:389278-389297 None:intergenic 40.0%
AAGAGATACTTCCAAGTCCA+TGG - Chr3:391308-391327 None:intergenic 40.0%
ACATTCTCCCCTAAAGAATC+AGG + Chr3:394094-394113 MsG0380011494.01.T01:intron 40.0%
ACCTAACCCAAACCTTAATC+TGG + Chr3:393410-393429 MsG0380011494.01.T01:CDS 40.0%
ACTAAGCCCAGATTAAGGTT+TGG - Chr3:393420-393439 None:intergenic 40.0%
ACTTACAGCAAAAGGACTAG+TGG + Chr3:391613-391632 MsG0380011494.01.T01:intron 40.0%
ACTTAGGCCTGATTCTTTAG+GGG - Chr3:394104-394123 None:intergenic 40.0%
AGATCTTCTTCATCAACAGG+TGG - Chr3:388775-388794 None:intergenic 40.0%
AGTCAGGTTATGGCTACAAT+TGG + Chr3:393087-393106 MsG0380011494.01.T01:CDS 40.0%
AGTTGCAACTTTCTTCAGTC+AGG + Chr3:393071-393090 MsG0380011494.01.T01:CDS 40.0%
AGTTTGCCTTTGTGGAAATG+AGG + Chr3:393169-393188 MsG0380011494.01.T01:CDS 40.0%
ATAGTTAAAGGATATGCGCG+AGG + Chr3:390766-390785 MsG0380011494.01.T01:intron 40.0%
ATCACGCCATTATTTCCTGA+AGG - Chr3:394394-394413 None:intergenic 40.0%
ATCCTCCAGAAGTAGAGAAA+AGG + Chr3:389993-390012 MsG0380011494.01.T01:CDS 40.0%
ATCGTAGTGAGAGAAAGGAA+AGG + Chr3:390268-390287 MsG0380011494.01.T01:CDS 40.0%
ATTACCTGCTCATTAGCTGT+AGG - Chr3:392751-392770 None:intergenic 40.0%
ATTCGTAAGTCTACCGAAGT+AGG - Chr3:392135-392154 None:intergenic 40.0%
CAAAGGCAAACTTCTTGTCA+TGG - Chr3:393161-393180 None:intergenic 40.0%
CCTAACCCAAACCTTAATCT+GGG + Chr3:393411-393430 MsG0380011494.01.T01:CDS 40.0%
CGTCCTACAAAAACCCTAAA+GGG - Chr3:389103-389122 None:intergenic 40.0%
CTAAGCCCAGATTAAGGTTT+GGG - Chr3:393419-393438 None:intergenic 40.0%
GGACGAGAATTGCATTAAGT+TGG + Chr3:389118-389137 MsG0380011494.01.T01:intron 40.0%
GGAGAGAAAAGGAGAGAAAA+AGG + Chr3:390028-390047 MsG0380011494.01.T01:CDS 40.0%
GTGAGATCTTCTTCATCAAC+AGG - Chr3:388778-388797 None:intergenic 40.0%
TAGTTAAAGGATATGCGCGA+GGG + Chr3:390767-390786 MsG0380011494.01.T01:intron 40.0%
TCATCATCTTTGAGCTCATC+AGG - Chr3:393954-393973 None:intergenic 40.0%
TCGATCTAGATCAAGGTCAA+GGG + Chr3:390592-390611 MsG0380011494.01.T01:CDS 40.0%
TCGTAGTGAGAGAAAGGAAA+GGG + Chr3:390269-390288 MsG0380011494.01.T01:CDS 40.0%
TCGTCCTACAAAAACCCTAA+AGG - Chr3:389104-389123 None:intergenic 40.0%
TGACAAGAAGTTTGCCTTTG+TGG + Chr3:393161-393180 MsG0380011494.01.T01:CDS 40.0%
TGAGAGAAAGGAAAGGGTAA+GGG + Chr3:390275-390294 MsG0380011494.01.T01:CDS 40.0%
TGATGAGCTCAAAGATGATG+AGG + Chr3:393953-393972 MsG0380011494.01.T01:CDS 40.0%
TTCTTCCATTCAGTCCAGAA+CGG - Chr3:394875-394894 None:intergenic 40.0%
TTGGAGTATGCTGATGTTGA+TGG + Chr3:394837-394856 MsG0380011494.01.T01:CDS 40.0%
TTGTGTGAATGCATGTGGAA+GGG + Chr3:390803-390822 MsG0380011494.01.T01:intron 40.0%
TTTGTCTGTGTTTGTCCTTC+AGG + Chr3:394376-394395 MsG0380011494.01.T01:intron 40.0%
! AATACCTGATTTGTAGGCAG+GGG - Chr3:392448-392467 None:intergenic 40.0%
! ACTTTTACCTGTCATAGCCT+CGG - Chr3:390329-390348 None:intergenic 40.0%
! ATGCTCTCTTGTTCAGGTTT+AGG - Chr3:393738-393757 None:intergenic 40.0%
! ATTCACATTTGAGACAACGC+TGG - Chr3:389505-389524 None:intergenic 40.0%
! CCAGAGAACAAATTTGCTCA+GGG + Chr3:394930-394949 MsG0380011494.01.T01:CDS 40.0%
! CTGGTAATTGGGTACTGTAT+TGG + Chr3:389228-389247 MsG0380011494.01.T01:intron 40.0%
! GATTAAGGTTTGGGTTAGGT+TGG - Chr3:393410-393429 None:intergenic 40.0%
! GATTCTTGATGATATGCGAC+AGG + Chr3:393986-394005 MsG0380011494.01.T01:CDS 40.0%
! GGAATCAATGCACCTGTTTT+TGG + Chr3:392076-392095 MsG0380011494.01.T01:intron 40.0%
! TAGAGACTTTTGGTCCTCTT+CGG + Chr3:393541-393560 MsG0380011494.01.T01:CDS 40.0%
! TATGTTACAACCAGCATTGG+TGG + Chr3:393893-393912 MsG0380011494.01.T01:CDS 40.0%
! TCCAGAGAACAAATTTGCTC+AGG + Chr3:394929-394948 MsG0380011494.01.T01:CDS 40.0%
! TCTGGAACTAAATGGTGCTT+TGG + Chr3:391916-391935 MsG0380011494.01.T01:intron 40.0%
! TGTAGCTTTTATGTCCAAGG+AGG + Chr3:392055-392074 MsG0380011494.01.T01:intron 40.0%
! TTCACATTTGAGACAACGCT+GGG - Chr3:389504-389523 None:intergenic 40.0%
!! AGGCTTTGAGTCTGAAACTT+AGG - Chr3:394120-394139 None:intergenic 40.0%
!! ATGCTCTAAGAAGGCAATGT+TGG + Chr3:391989-392008 MsG0380011494.01.T01:intron 40.0%
!! CAAATTTCATAGGTGGTGGA+AGG + Chr3:391435-391454 MsG0380011494.01.T01:intron 40.0%
!! TCTTGAATACTGGTTTCCCT+TGG + Chr3:391855-391874 MsG0380011494.01.T01:intron 40.0%
!! TGCTCTAAGAAGGCAATGTT+GGG + Chr3:391990-392009 MsG0380011494.01.T01:intron 40.0%
!! TGTTGGTGTTGATCCTAGTA+TGG + Chr3:391757-391776 MsG0380011494.01.T01:intron 40.0%
!!! ATCAATGCACCTGTTTTTGG+TGG + Chr3:392079-392098 MsG0380011494.01.T01:intron 40.0%
!!! ATTTTGGAACTCCATGGACT+TGG + Chr3:391294-391313 MsG0380011494.01.T01:intron 40.0%
!!! CTATTGGCCTTTTGAGAACT+TGG + Chr3:391145-391164 MsG0380011494.01.T01:intron 40.0%
!!! TCAATGCACCTGTTTTTGGT+GGG + Chr3:392080-392099 MsG0380011494.01.T01:intron 40.0%
!!! TCTTTCTGGGACTTACCTTT+TGG - Chr3:390660-390679 None:intergenic 40.0%
!!! TGACCCTTTAGGGTTTTTGT+AGG + Chr3:389097-389116 MsG0380011494.01.T01:intron 40.0%
AAAGGGATAAGGGAAGAGAC+AGG + Chr3:390046-390065 MsG0380011494.01.T01:CDS 45.0%
AAATTCACCACCATCTGGGT+TGG + Chr3:389594-389613 MsG0380011494.01.T01:intron 45.0%
AACTTTGATCCCAACCCAGA+TGG - Chr3:389607-389626 None:intergenic 45.0%
AAGAGACAGGGATAGAAGCA+GGG + Chr3:390059-390078 MsG0380011494.01.T01:CDS 45.0%
AAGCAAACCTTTCCAACTCC+AGG - Chr3:394287-394306 None:intergenic 45.0%
AAGGGATAAGGGAAGAGACA+GGG + Chr3:390047-390066 MsG0380011494.01.T01:CDS 45.0%
AATTCACCACCATCTGGGTT+GGG + Chr3:389595-389614 MsG0380011494.01.T01:intron 45.0%
ACATTCACAACTGCATCACC+TGG - Chr3:393129-393148 None:intergenic 45.0%
ACCCAATATCGCAGAAGTAG+GGG - Chr3:391653-391672 None:intergenic 45.0%
ACCTTGATCTAGATCGAGAC+CGG - Chr3:390589-390608 None:intergenic 45.0%
ACTAGATCAAAACCCCGAAG+AGG - Chr3:393558-393577 None:intergenic 45.0%
AGCAAACCTTTCCAACTCCA+GGG - Chr3:394286-394305 None:intergenic 45.0%
AGTTAAAGGATATGCGCGAG+GGG + Chr3:390768-390787 MsG0380011494.01.T01:intron 45.0%
AGTTCAGGCTATGACACAAC+AGG + Chr3:392577-392596 MsG0380011494.01.T01:CDS 45.0%
ATAGAAGCAGGGATAGGGAT+AGG + Chr3:390070-390089 MsG0380011494.01.T01:CDS 45.0%
ATAGGGATAGGGAGAAAAGC+AGG + Chr3:390082-390101 MsG0380011494.01.T01:CDS 45.0%
ATCCAAAGCCATTGCATTGC+TGG - Chr3:393208-393227 None:intergenic 45.0%
ATGATCGAGAGGATAGGCAT+AGG + Chr3:390555-390574 MsG0380011494.01.T01:CDS 45.0%
CACCCAATATCGCAGAAGTA+GGG - Chr3:391654-391673 None:intergenic 45.0%
CAGAAGTAGAGAAAAGGAGC+GGG + Chr3:389999-390018 MsG0380011494.01.T01:CDS 45.0%
CAGGTTATGGCTACAATTGG+AGG + Chr3:393090-393109 MsG0380011494.01.T01:CDS 45.0%
CCACCAACAAAAATCCGATC+AGG - Chr3:393480-393499 None:intergenic 45.0%
CCAGAAGTAGAGAAAAGGAG+CGG + Chr3:389998-390017 MsG0380011494.01.T01:CDS 45.0%
CGACAGGAATGCTCCAAATT+TGG + Chr3:394002-394021 MsG0380011494.01.T01:CDS 45.0%
CTCGATCTAGATCAAGGTCA+AGG + Chr3:390591-390610 MsG0380011494.01.T01:CDS 45.0%
CTCGATCTGAGCATAGATCA+AGG + Chr3:390615-390634 MsG0380011494.01.T01:CDS 45.0%
GAACAAGACCCACCAAAAAC+AGG - Chr3:392091-392110 None:intergenic 45.0%
GATGATTATCACAGAAGCCG+AGG + Chr3:390309-390328 MsG0380011494.01.T01:CDS 45.0%
GCCAAAATTCACCACCATCT+GGG + Chr3:389590-389609 MsG0380011494.01.T01:intron 45.0%
GGAAACATTCCAGGAATAGC+AGG - Chr3:392415-392434 None:intergenic 45.0%
GTAGGCAGGGGAAACATATT+TGG - Chr3:392436-392455 None:intergenic 45.0%
GTCCAACTAAGCCCAGATTA+AGG - Chr3:393425-393444 None:intergenic 45.0%
GTGAGAGAAAGGAAAGGGTA+AGG + Chr3:390274-390293 MsG0380011494.01.T01:CDS 45.0%
GTTACAATCACTGAGCAGCA+AGG - Chr3:391464-391483 None:intergenic 45.0%
GTTGTGTGAATGCATGTGGA+AGG + Chr3:390802-390821 MsG0380011494.01.T01:intron 45.0%
TACTTGCAGGTCAGATCTCT+GGG + Chr3:392383-392402 MsG0380011494.01.T01:intron 45.0%
TAGAAGCAGGGATAGGGATA+GGG + Chr3:390071-390090 MsG0380011494.01.T01:CDS 45.0%
TAGGGATAGGGAGAAAAGCA+GGG + Chr3:390083-390102 MsG0380011494.01.T01:CDS 45.0%
TATTCCATTGAGAGCTGCAC+AGG - Chr3:393655-393674 None:intergenic 45.0%
TCTTCCATTCAGTCCAGAAC+GGG - Chr3:394874-394893 None:intergenic 45.0%
TCTTCTTCATCAACAGGTGG+TGG - Chr3:388772-388791 None:intergenic 45.0%
TGAAGAAGCCAGCAATGCAA+TGG + Chr3:393197-393216 MsG0380011494.01.T01:CDS 45.0%
TGTCCAGCAGAACCAGAATT+GGG - Chr3:392483-392502 None:intergenic 45.0%
TGTCGTGTAGCCTACATGTT+TGG - Chr3:392697-392716 None:intergenic 45.0%
TGTTGTGTCATAGCCTGAAC+TGG - Chr3:392578-392597 None:intergenic 45.0%
TTGTCCAGCAGAACCAGAAT+TGG - Chr3:392484-392503 None:intergenic 45.0%
TTTGCTCAGGGCGATTATGA+AGG + Chr3:394942-394961 MsG0380011494.01.T01:CDS 45.0%
! AGAGACTTTTGGTCCTCTTC+GGG + Chr3:393542-393561 MsG0380011494.01.T01:CDS 45.0%
! ATATGCCTTGCTGTACTTGC+AGG + Chr3:392370-392389 MsG0380011494.01.T01:intron 45.0%
! CAACTGACTTCTGCTACAAC+TGG - Chr3:392278-392297 None:intergenic 45.0%
! CCCAGATTAAGGTTTGGGTT+AGG - Chr3:393414-393433 None:intergenic 45.0%
! CCCTGAGCAAATTTGTTCTC+TGG - Chr3:394933-394952 None:intergenic 45.0%
! CCTGATCGGATTTTTGTTGG+TGG + Chr3:393477-393496 MsG0380011494.01.T01:CDS 45.0%
! CTCCTTTTCTCTACTTCTGG+AGG - Chr3:389998-390017 None:intergenic 45.0%
! GGTCCTGATCGGATTTTTGT+TGG + Chr3:393474-393493 MsG0380011494.01.T01:CDS 45.0%
! GTTCAGGTTTAGGCTGCATT+GGG - Chr3:393728-393747 None:intergenic 45.0%
! TGTTCAGGTTTAGGCTGCAT+TGG - Chr3:393729-393748 None:intergenic 45.0%
!! AAGACAGGGAGAGCACTAAA+CGG - Chr3:392554-392573 None:intergenic 45.0%
!! ACCCAGATGGTGGTGAATTT+TGG - Chr3:389594-389613 None:intergenic 45.0%
!! AGCAATGCAATGGCTTTGGA+TGG + Chr3:393207-393226 MsG0380011494.01.T01:CDS 45.0%
!! GGGTCTTGTTCATCTTCAAC+TGG + Chr3:392100-392119 MsG0380011494.01.T01:intron 45.0%
!! TGCAGCATTGGCAATAGGAA+AGG - Chr3:394653-394672 None:intergenic 45.0%
!!! GAACGTTGCTTTTCATGCAG+AGG - Chr3:391569-391588 None:intergenic 45.0%
!!! AAATTAAAATTTGAAATTTT+AGG - Chr3:389066-389085 None:intergenic 5.0%
!!! AATTAAAATTTGAAATTTTA+GGG - Chr3:389065-389084 None:intergenic 5.0%
!!! CTTAAAATTTTAAAATTATT+AGG - Chr3:390978-390997 None:intergenic 5.0%
AATTCAGGGTGCACCAGTGA+AGG + Chr3:393332-393351 MsG0380011494.01.T01:intron 50.0%
ACAATTGGAGGAAACACCGC+TGG + Chr3:393102-393121 MsG0380011494.01.T01:CDS 50.0%
ACAGAGAGAGTGAGAGAAGC+AGG + Chr3:390106-390125 MsG0380011494.01.T01:CDS 50.0%
ACAGGGATAGAAGCAGGGAT+AGG + Chr3:390064-390083 MsG0380011494.01.T01:CDS 50.0%
ACCATCATAGAGATCGCCAC+AGG + Chr3:390244-390263 MsG0380011494.01.T01:CDS 50.0%
ACCTTTGTTGCCACCAATGC+TGG - Chr3:393906-393925 None:intergenic 50.0%
ACTTGCAGGTCAGATCTCTG+GGG + Chr3:392384-392403 MsG0380011494.01.T01:intron 50.0%
AGAGAAAAGGAGCGGGAGAA+TGG + Chr3:390006-390025 MsG0380011494.01.T01:CDS 50.0%
AGATTGCTCTGCAGGTATGG+TGG + Chr3:393778-393797 MsG0380011494.01.T01:intron 50.0%
AGCAGATTGCTCTGCAGGTA+TGG + Chr3:393775-393794 MsG0380011494.01.T01:intron 50.0%
AGCCAGCAATGCAATGGCTT+TGG + Chr3:393203-393222 MsG0380011494.01.T01:CDS 50.0%
AGGCTACACGACATGCTAGA+CGG + Chr3:392704-392723 MsG0380011494.01.T01:intron 50.0%
ATAGCCTGAACTGGCAAGAC+AGG - Chr3:392569-392588 None:intergenic 50.0%
ATTGCCTGTGCAGCTCTCAA+TGG + Chr3:393648-393667 MsG0380011494.01.T01:CDS 50.0%
CAACACACATTGGACTCGAC+TGG - Chr3:391231-391250 None:intergenic 50.0%
CAGAGAGAGTGAGAGAAGCA+GGG + Chr3:390107-390126 MsG0380011494.01.T01:CDS 50.0%
CAGAGATAGGGAGAGAAGCA+GGG + Chr3:390137-390156 MsG0380011494.01.T01:CDS 50.0%
CAGGGATAGAAGCAGGGATA+GGG + Chr3:390065-390084 MsG0380011494.01.T01:CDS 50.0%
CAGGGATCGTAGTGAGAGAA+AGG + Chr3:390263-390282 MsG0380011494.01.T01:CDS 50.0%
CATGCTAGACGGGTGTATGT+TGG + Chr3:392715-392734 MsG0380011494.01.T01:CDS 50.0%
CCATCATAGAGATCGCCACA+GGG + Chr3:390245-390264 MsG0380011494.01.T01:CDS 50.0%
CCCAATATCGCAGAAGTAGG+GGG - Chr3:391652-391671 None:intergenic 50.0%
CCCCCTACTTCTGCGATATT+GGG + Chr3:391649-391668 MsG0380011494.01.T01:CDS 50.0%
CTCTATGATGGTCACGGTCA+CGG - Chr3:390236-390255 None:intergenic 50.0%
CTCTCCTACAGCTAATGAGC+AGG + Chr3:392744-392763 MsG0380011494.01.T01:CDS 50.0%
GAAGAGACAGGGATAGAAGC+AGG + Chr3:390058-390077 MsG0380011494.01.T01:CDS 50.0%
GAGAAAAGGAGCGGGAGAAT+GGG + Chr3:390007-390026 MsG0380011494.01.T01:CDS 50.0%
GAGAGGATAGGCATAGGAGT+AGG + Chr3:390561-390580 MsG0380011494.01.T01:CDS 50.0%
GATTGCTCTGCAGGTATGGT+GGG + Chr3:393779-393798 MsG0380011494.01.T01:intron 50.0%
GCACCCAATATCGCAGAAGT+AGG - Chr3:391655-391674 None:intergenic 50.0%
GCTCATTAGCTGTAGGAGAG+AGG - Chr3:392744-392763 None:intergenic 50.0%
GGCCAAAATTCACCACCATC+TGG + Chr3:389589-389608 MsG0380011494.01.T01:intron 50.0%
GGCGATCTCTATGATGGTCA+CGG - Chr3:390242-390261 None:intergenic 50.0%
GGCTTAGTTGGACTATCACC+TGG + Chr3:393432-393451 MsG0380011494.01.T01:CDS 50.0%
GTACTTGCAGGTCAGATCTC+TGG + Chr3:392382-392401 MsG0380011494.01.T01:intron 50.0%
GTTCTCGTTCACGCTCCAAA+AGG + Chr3:390642-390661 MsG0380011494.01.T01:CDS 50.0%
GTTTCCCCTGCCTACAAATC+AGG + Chr3:392441-392460 MsG0380011494.01.T01:CDS 50.0%
TAGCCTGAACTGGCAAGACA+GGG - Chr3:392568-392587 None:intergenic 50.0%
TCAGAGATAGGGAGAGAAGC+AGG + Chr3:390136-390155 MsG0380011494.01.T01:CDS 50.0%
TCAGCTGGAATAGCACCTGA+TGG + Chr3:395077-395096 MsG0380011494.01.T01:three_prime_UTR 50.0%
TCCCCCTACTTCTGCGATAT+TGG + Chr3:391648-391667 MsG0380011494.01.T01:CDS 50.0%
TCTGACCTGCAAGTACAGCA+AGG - Chr3:392378-392397 None:intergenic 50.0%
TTCTCTCACTACGATCCCTG+TGG - Chr3:390263-390282 None:intergenic 50.0%
TTTGATCCCAACCCAGATGG+TGG - Chr3:389604-389623 None:intergenic 50.0%
! AAAGCCCGTTCTGGACTGAA+TGG + Chr3:394867-394886 MsG0380011494.01.T01:CDS 50.0%
! ACGAAGGGAGTATGATCGAG+AGG + Chr3:390544-390563 MsG0380011494.01.T01:CDS 50.0%
! ATTCAGTCCAGAACGGGCTT+TGG - Chr3:394868-394887 None:intergenic 50.0%
! CCGCTCCTTTTCTCTACTTC+TGG - Chr3:390001-390020 None:intergenic 50.0%
! GAGACTTTTGGTCCTCTTCG+GGG + Chr3:393543-393562 MsG0380011494.01.T01:CDS 50.0%
! GGGAGTATGATCGAGAGGAT+AGG + Chr3:390549-390568 MsG0380011494.01.T01:CDS 50.0%
! TCTGCGATATTGGGTGCTAC+TGG + Chr3:391658-391677 MsG0380011494.01.T01:CDS 50.0%
! TCTTCATCAACAGGTGGTGG+TGG - Chr3:388769-388788 None:intergenic 50.0%
!! ACCAGCATTGGTGGCAACAA+AGG + Chr3:393902-393921 MsG0380011494.01.T01:CDS 50.0%
!! AGGTTTGGGTTAGGTTGGCT+TGG - Chr3:393405-393424 None:intergenic 50.0%
!! CAGGTGCATTGATTCCTCCT+TGG - Chr3:392072-392091 None:intergenic 50.0%
!! CGACTGGAACAACTTGTTGC+AGG - Chr3:391215-391234 None:intergenic 50.0%
!! GTTCCCAATTCTGGTTCTGC+TGG + Chr3:392477-392496 MsG0380011494.01.T01:intron 50.0%
AACTGCATCACCTGGACCAG+CGG - Chr3:393121-393140 None:intergenic 55.0%
ACAGAAGCCGAGGCTATGAC+AGG + Chr3:390319-390338 MsG0380011494.01.T01:CDS 55.0%
ACAGCAGCAGATTGCTCTGC+AGG + Chr3:393770-393789 MsG0380011494.01.T01:CDS 55.0%
ACAGTTCACCATCAGGCCGT+GGG - Chr3:394262-394281 None:intergenic 55.0%
ACGCCCATTGTCAGCACAGT+GGG - Chr3:392024-392043 None:intergenic 55.0%
ACTGTGCCCTGGAGTTGGAA+AGG + Chr3:394277-394296 MsG0380011494.01.T01:CDS 55.0%
AGAGTGAGAGAAGCAGGGAC+AGG + Chr3:390112-390131 MsG0380011494.01.T01:CDS 55.0%
ATAGGCATAGGAGTAGGCGC+CGG + Chr3:390567-390586 MsG0380011494.01.T01:CDS 55.0%
ATAGGGAGAGAAGCAGGGAC+AGG + Chr3:390142-390161 MsG0380011494.01.T01:CDS 55.0%
ATCGGGATGGGGAGAAGGAA+AGG + Chr3:390202-390221 MsG0380011494.01.T01:CDS 55.0%
ATGGGGAGAAGGAAAGGGAG+AGG + Chr3:390208-390227 MsG0380011494.01.T01:CDS 55.0%
CAAAGACAGGGAACGCGATC+GGG + Chr3:390185-390204 MsG0380011494.01.T01:CDS 55.0%
CAGGGACAGGGTCAGAGATA+GGG + Chr3:390125-390144 MsG0380011494.01.T01:CDS 55.0%
CCCTGTGGCGATCTCTATGA+TGG - Chr3:390248-390267 None:intergenic 55.0%
GAGTGAGAGAAGCAGGGACA+GGG + Chr3:390113-390132 MsG0380011494.01.T01:CDS 55.0%
GCAAAGACAGGGAACGCGAT+CGG + Chr3:390184-390203 MsG0380011494.01.T01:CDS 55.0%
GCCGGTCTCGATCTAGATCA+AGG + Chr3:390585-390604 MsG0380011494.01.T01:CDS 55.0%
GCGGGAGAATGGGAGAGAAA+AGG + Chr3:390017-390036 MsG0380011494.01.T01:CDS 55.0%
GCTAGACGGGTGTATGTTGG+TGG + Chr3:392718-392737 MsG0380011494.01.T01:CDS 55.0%
GCTGGAATAGCACCTGATGG+AGG + Chr3:395080-395099 MsG0380011494.01.T01:three_prime_UTR 55.0%
GGCTACACGACATGCTAGAC+GGG + Chr3:392705-392724 MsG0380011494.01.T01:intron 55.0%
GGTTCTACCAAAGCCCGTTC+TGG + Chr3:394858-394877 MsG0380011494.01.T01:CDS 55.0%
GTAGGTCTCCTGACCTTCAC+TGG - Chr3:393348-393367 None:intergenic 55.0%
TAGGGAGAGAAGCAGGGACA+GGG + Chr3:390143-390162 MsG0380011494.01.T01:CDS 55.0%
TCGGGATGGGGAGAAGGAAA+GGG + Chr3:390203-390222 MsG0380011494.01.T01:CDS 55.0%
TCTCCCTGTCTTGCCAGTTC+AGG + Chr3:392562-392581 MsG0380011494.01.T01:CDS 55.0%
TGGGGAGAAGGAAAGGGAGA+GGG + Chr3:390209-390228 MsG0380011494.01.T01:CDS 55.0%
! AGCCCCACTGTGCTGACAAT+GGG + Chr3:392018-392037 MsG0380011494.01.T01:intron 55.0%
! GGGGACTTGATGGTCCTGAT+CGG + Chr3:393463-393482 MsG0380011494.01.T01:CDS 55.0%
! TAGCCCCACTGTGCTGACAA+TGG + Chr3:392017-392036 MsG0380011494.01.T01:intron 55.0%
!! ACTATCACCTGGCTCTGCTG+GGG + Chr3:393443-393462 MsG0380011494.01.T01:CDS 55.0%
!! GACTATCACCTGGCTCTGCT+GGG + Chr3:393442-393461 MsG0380011494.01.T01:CDS 55.0%
!! GTTAGGTTGGCTTGGCCCTA+GGG - Chr3:393397-393416 None:intergenic 55.0%
!! TCATCAACAGGTGGTGGTGG+TGG - Chr3:388766-388785 None:intergenic 55.0%
!! TTGGGTGCTACTGGTGTTGC+AGG + Chr3:391667-391686 MsG0380011494.01.T01:CDS 55.0%
AAGGATATGCGCGAGGGGAC+TGG + Chr3:390773-390792 MsG0380011494.01.T01:intron 60.0%
ACAGGGAACGCGATCGGGAT+GGG + Chr3:390190-390209 MsG0380011494.01.T01:CDS 60.0%
AGGGAGAGAAGCAGGGACAG+GGG + Chr3:390144-390163 MsG0380011494.01.T01:CDS 60.0%
AGGGTGCACCAGTGAAGGTC+AGG + Chr3:393337-393356 MsG0380011494.01.T01:intron 60.0%
ATGTGGTGATCCCTCGCCCA+CGG + Chr3:394243-394262 MsG0380011494.01.T01:CDS 60.0%
CACAGTTCACCATCAGGCCG+TGG - Chr3:394263-394282 None:intergenic 60.0%
CACGCCCATTGTCAGCACAG+TGG - Chr3:392025-392044 None:intergenic 60.0%
CCAGGGCACAGTTCACCATC+AGG - Chr3:394269-394288 None:intergenic 60.0%
CCTAGGGCAGCAGCTAGAGA+CGG - Chr3:393381-393400 None:intergenic 60.0%
CGCCCATTGTCAGCACAGTG+GGG - Chr3:392023-392042 None:intergenic 60.0%
CGTCTCTAGCTGCTGCCCTA+GGG + Chr3:393379-393398 MsG0380011494.01.T01:CDS 60.0%
GCAGGGACAGGGTCAGAGAT+AGG + Chr3:390124-390143 MsG0380011494.01.T01:CDS 60.0%
GGGGCAAGTCCTGCTATTCC+TGG + Chr3:392403-392422 MsG0380011494.01.T01:CDS 60.0%
GGTGAACTGTGCCCTGGAGT+TGG + Chr3:394272-394291 MsG0380011494.01.T01:CDS 60.0%
! CCTGATGGTGAACTGTGCCC+TGG + Chr3:394266-394285 MsG0380011494.01.T01:CDS 60.0%
!! CTATCACCTGGCTCTGCTGG+GGG + Chr3:393444-393463 MsG0380011494.01.T01:CDS 60.0%
!! GGACTATCACCTGGCTCTGC+TGG + Chr3:393441-393460 MsG0380011494.01.T01:CDS 60.0%
!! GGTTAGGTTGGCTTGGCCCT+AGG - Chr3:393398-393417 None:intergenic 60.0%
!! TCAACAGGTGGTGGTGGTGG+TGG - Chr3:388763-388782 None:intergenic 60.0%
ACGCGATCGGGATGGGGAGA+AGG + Chr3:390197-390216 MsG0380011494.01.T01:CDS 65.0%
CAGGGAACGCGATCGGGATG+GGG + Chr3:390191-390210 MsG0380011494.01.T01:CDS 65.0%
CCGTCTCTAGCTGCTGCCCT+AGG + Chr3:393378-393397 MsG0380011494.01.T01:CDS 65.0%
GACAGGGAACGCGATCGGGA+TGG + Chr3:390189-390208 MsG0380011494.01.T01:CDS 65.0%
GGAGGAAACACCGCTGGTCC+AGG + Chr3:393108-393127 MsG0380011494.01.T01:CDS 65.0%
GGCTCTGCTGGGGGACTTGA+TGG + Chr3:393453-393472 MsG0380011494.01.T01:CDS 65.0%
TCAAGTCCCCCAGCAGAGCC+AGG - Chr3:393453-393472 None:intergenic 65.0%
!! ACAGGTGGTGGTGGTGGTGG+TGG - Chr3:388760-388779 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGTTG+TGG - Chr3:388754-388773 None:intergenic 65.0%
ATCCCTCGCCCACGGCCTGA+TGG + Chr3:394251-394270 MsG0380011494.01.T01:CDS 70.0%
CACCATCAGGCCGTGGGCGA+GGG - Chr3:394256-394275 None:intergenic 70.0%
TCACCATCAGGCCGTGGGCG+AGG - Chr3:394257-394276 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 388673 395215 388673 ID=MsG0380011494.01;Name=MsG0380011494.01
Chr3 mRNA 388673 395215 388673 ID=MsG0380011494.01.T01;Parent=MsG0380011494.01;Name=MsG0380011494.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0.81|0.83|1|0.90|0.91|12|247|637
Chr3 exon 394831 395215 394831 ID=MsG0380011494.01.T01:exon:169;Parent=MsG0380011494.01.T01
Chr3 exon 394231 394298 394231 ID=MsG0380011494.01.T01:exon:168;Parent=MsG0380011494.01.T01
Chr3 exon 393888 394023 393888 ID=MsG0380011494.01.T01:exon:167;Parent=MsG0380011494.01.T01
Chr3 exon 393339 393791 393339 ID=MsG0380011494.01.T01:exon:166;Parent=MsG0380011494.01.T01
Chr3 exon 393069 393242 393069 ID=MsG0380011494.01.T01:exon:165;Parent=MsG0380011494.01.T01
Chr3 exon 392706 392765 392706 ID=MsG0380011494.01.T01:exon:164;Parent=MsG0380011494.01.T01
Chr3 exon 392545 392598 392545 ID=MsG0380011494.01.T01:exon:163;Parent=MsG0380011494.01.T01
Chr3 exon 392392 392462 392392 ID=MsG0380011494.01.T01:exon:162;Parent=MsG0380011494.01.T01
Chr3 exon 391621 391688 391621 ID=MsG0380011494.01.T01:exon:161;Parent=MsG0380011494.01.T01
Chr3 exon 390544 390663 390544 ID=MsG0380011494.01.T01:exon:160;Parent=MsG0380011494.01.T01
Chr3 exon 389961 390340 389961 ID=MsG0380011494.01.T01:exon:159;Parent=MsG0380011494.01.T01
Chr3 exon 388673 388864 388673 ID=MsG0380011494.01.T01:exon:158;Parent=MsG0380011494.01.T01
Chr3 CDS 388673 388864 388673 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 389961 390340 389961 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 390544 390663 390544 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 391621 391688 391621 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 392392 392462 392392 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 392545 392598 392545 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 392706 392765 392706 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 393069 393242 393069 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 393339 393791 393339 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 393888 394023 393888 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 394231 394298 394231 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 CDS 394831 394968 394831 ID=MsG0380011494.01.T01:cds;Parent=MsG0380011494.01.T01
Chr3 three_prime_UTR 394969 395215 394969 ID=MsG0380011494.01.T01:three_prime_utr;Parent=MsG0380011494.01.T01
Gene Sequence

>MsG0380011494.01.T01

ATGGGTGAATACGAGTTCGAAGACGAAGAGAGAAAATTCCAACAACAAGAAGAAGATCATAATCACAACGATTCTTCTCCACAACCACCACCACCACCACCACCTGTTGATGAAGAAGATCTCACCGATTCCAAATCCAACGTATTTTTCCTAATTCACCGTTCCTTTATTTTTCAATTTCAATCAATTAGGCATGGTTCTCGTGATAATGACAGAGACAGAGAATCCTCCAGAAGTAGAGAAAAGGAGCGGGAGAATGGGAGAGAAAAGGAGAGAAAAAGGGATAAGGGAAGAGACAGGGATAGAAGCAGGGATAGGGATAGGGAGAAAAGCAGGGACAGAGAGAGTGAGAGAAGCAGGGACAGGGTCAGAGATAGGGAGAGAAGCAGGGACAGGGGCAGAGATAGTGAGAAAAGCAAAGACAGGGAACGCGATCGGGATGGGGAGAAGGAAAGGGAGAGGGACCGTGACCGTGACCATCATAGAGATCGCCACAGGGATCGTAGTGAGAGAAAGGAAAGGGTAAGGGATAGAGATGACGATGATTATCACAGAAGCCGAGGCTATGACAGACGAAGGGAGTATGATCGAGAGGATAGGCATAGGAGTAGGCGCCGGTCTCGATCTAGATCAAGGTCAAGGGCTCGATCTGAGCATAGATCAAGGTCACGTTCTCGTTCACGCTCCAAAAGCAAAAGGACTAGTGGTTTTGATATGGCTCCCCCTACTTCTGCGATATTGGGTGCTACTGGTGTTGCAGGTCAGATCTCTGGGGCAAGTCCTGCTATTCCTGGAATGTTTCCAAATATGTTTCCCCTGCCTACAAATCAGGTGCAGCCGTTTAGTGCTCTCCCTGTCTTGCCAGTTCAGGCTATGACACAACAGGCTACACGACATGCTAGACGGGTGTATGTTGGTGGCCTCTCTCCTACAGCTAATGAGCAGTCAGTTGCAACTTTCTTCAGTCAGGTTATGGCTACAATTGGAGGAAACACCGCTGGTCCAGGTGATGCAGTTGTGAATGTTTACATTAACCATGACAAGAAGTTTGCCTTTGTGGAAATGAGGTCTGTTGAAGAAGCCAGCAATGCAATGGCTTTGGATGGAATTATTTTTGAGGGTGCACCAGTGAAGGTCAGGAGACCTACTGATTATAATCCGTCTCTAGCTGCTGCCCTAGGGCCAAGCCAACCTAACCCAAACCTTAATCTGGGCTTAGTTGGACTATCACCTGGCTCTGCTGGGGGACTTGATGGTCCTGATCGGATTTTTGTTGGTGGAGTTCCTTATTATTTTACTGAAACTCAAATCAGAGAGCTTTTAGAGACTTTTGGTCCTCTTCGGGGTTTTGATCTAGTGAAAGATAGAGAAACAGGGAATTCAAAGGGTTATGCATTTTGTGTTTATCAAGATCTTGCAGTTACAGATATTGCCTGTGCAGCTCTCAATGGAATAAAAATGGGTGACAAGACTCTTACAGTTAGACGAGCTAATCAAAATACAAACCCAATGCAGCCTAAACCTGAACAAGAGAGCATTTTAATGCATGCACAGCAGCAGATTGCTCTGCAGAAACTTATGTTACAACCAGCATTGGTGGCAACAAAGGTGCTGTGTTTAACTCATGCAGTTTCTCCTGATGAGCTCAAAGATGATGAGGACTATGAAGAGATTCTTGATGATATGCGACAGGAATGCTCCAAATTTGGTAATTTGGTTAATGTGGTGATCCCTCGCCCACGGCCTGATGGTGAACTGTGCCCTGGAGTTGGAAAGGTATTTTTGGAGTATGCTGATGTTGATGGTTCTACCAAAGCCCGTTCTGGACTGAATGGAAGAAAATTTGGTGGAAATCAAGTAATTGCTGTCTTTTATCCAGAGAACAAATTTGCTCAGGGCGATTATGAAGGCTAA

Protein sequence

>MsG0380011494.01.T01

MGEYEFEDEERKFQQQEEDHNHNDSSPQPPPPPPPVDEEDLTDSKSNVFFLIHRSFIFQFQSIRHGSRDNDRDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGEKERERDRDRDHHRDRHRDRSERKERVRDRDDDDYHRSRGYDRRREYDREDRHRSRRRSRSRSRSRARSEHRSRSRSRSRSKSKRTSGFDMAPPTSAILGATGVAGQISGASPAIPGMFPNMFPLPTNQVQPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGLVGLSPGSAGGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAALNGIKMGDKTLTVRRANQNTNPMQPKPEQESILMHAQQQIALQKLMLQPALVATKVLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKARSGLNGRKFGGNQVIAVFYPENKFAQGDYEG*