AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025261.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025261.01.T01 MTR_5g025310 88.251 383 14 1 21 372 115 497 0.0 667
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025261.01.T01 AT1G09830 75.979 383 61 1 21 372 128 510 0.0 585

Find 154 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGAAGATGCTTCTTTC+TGG 0.117785 5:+16089174 None:intergenic
ATAAATGGGTAGAGGAATTT+TGG 0.148329 5:+16088618 None:intergenic
AACAATCAATAACAGTTAAT+TGG 0.183010 5:-16085740 MsG0580025261.01.T01:three_prime_UTR
GTATCTTTATGCTCTTTAAT+AGG 0.196399 5:+16085280 None:intergenic
AAGTTCTGCTTGCTGCTTGC+AGG 0.217650 5:-16086156 MsG0580025261.01.T01:CDS
CTAGTCCCACGCCCCATTTC+CGG 0.265105 5:+16088055 None:intergenic
ATGCTGGTGAAGGGTGATTT+TGG 0.268429 5:-16087014 MsG0580025261.01.T01:CDS
AGTTCAATGTCAACTTCTTT+AGG 0.269922 5:+16085258 None:intergenic
ATGAATACGTGAACTGCTTA+TGG 0.270074 5:+16089209 None:intergenic
CCTGAAGCCCCGCTTGTTGC+AGG 0.271102 5:-16088021 MsG0580025261.01.T01:CDS
TGAAGTTCCTTGGTTAAAAT+AGG 0.276295 5:+16086816 None:intergenic
TATCTTTATGCTCTTTAATA+GGG 0.278245 5:+16085281 None:intergenic
ATTACAAGATTCATCAACTA+TGG 0.279066 5:+16085677 None:intergenic
GCACCCATGCCACCAGTATT+TGG 0.280418 5:+16086852 None:intergenic
TGGATTACCCTCACTTATAT+TGG 0.283268 5:+16085697 None:intergenic
AGGATGGTTGTTCTGGTTAT+TGG 0.292291 5:-16088238 MsG0580025261.01.T01:five_prime_UTR
GAATCGAAAACTTACTTGAT+TGG 0.311542 5:+16089067 None:intergenic
GAAGAAAGATTTATTGCAAC+TGG 0.314003 5:-16085956 MsG0580025261.01.T01:CDS
CTTCTTTCTGGGTTGGTTTG+AGG 0.315417 5:+16089186 None:intergenic
GGCTTCTATCGTCGGGATAT+TGG 0.320109 5:-16085840 MsG0580025261.01.T01:CDS
GTATCACTGGACTGGTCTCC+TGG 0.325942 5:-16086118 MsG0580025261.01.T01:CDS
GGGTCTTTCTGCTCTTTAAT+AGG 0.331674 5:+16085202 None:intergenic
AGAAGAAAGGATGGTTGTTC+TGG 0.350493 5:-16088245 MsG0580025261.01.T01:intron
GCATGGAATATCTTGATATC+TGG 0.352212 5:+16085998 None:intergenic
TGAAGAAGATGCTTCTTTCT+GGG 0.353244 5:+16089175 None:intergenic
CCTGCAACAAGCGGGGCTTC+AGG 0.357287 5:+16088021 None:intergenic
CACCATCACCAACTCTCTTA+TGG 0.357657 5:+16086883 None:intergenic
ATCAAGTTTCTAACCCGTTT+GGG 0.361721 5:-16088661 MsG0580025261.01.T01:five_prime_UTR
AAGGCTGGAATTCCGACTTT+TGG 0.376671 5:-16087979 MsG0580025261.01.T01:CDS
AGAGTTGGTGATGGTGATAC+AGG 0.383175 5:-16086876 MsG0580025261.01.T01:CDS
CATCAAGTTTCTAACCCGTT+TGG 0.383905 5:-16088662 MsG0580025261.01.T01:five_prime_UTR
CAAACGGGTTAGAAACTTGA+TGG 0.397248 5:+16088663 None:intergenic
GCAGAAGCTGCTGCTCTAGA+AGG 0.403190 5:-16087949 MsG0580025261.01.T01:CDS
TGAATACGTGAACTGCTTAT+GGG 0.404091 5:+16089210 None:intergenic
AGTTCTGCTTGCTGCTTGCA+GGG 0.410296 5:-16086155 MsG0580025261.01.T01:CDS
CAACACGCTCAGCTTCTTCA+AGG 0.410367 5:+16086023 None:intergenic
CCATCGGCTTTGATAACAAT+TGG 0.410397 5:+16087104 None:intergenic
TCTTTCAAATTATTTAGTTA+AGG 0.411140 5:-16087998 MsG0580025261.01.T01:CDS
TCAAATTATTTAGTTAAGGC+TGG 0.411335 5:-16087994 MsG0580025261.01.T01:CDS
TACTATAGATTGAAGTTCCT+TGG 0.413300 5:+16086806 None:intergenic
GTTGTTCTGGTTATTGGTGG+AGG 0.417022 5:-16088232 MsG0580025261.01.T01:five_prime_UTR
ATTGAGTATAATGTGCGATT+TGG 0.421542 5:-16086670 MsG0580025261.01.T01:CDS
CAAAACATTTGAAAACACTT+TGG 0.426128 5:+16088544 None:intergenic
TCCTGGATCGGCAATGGTTG+TGG 0.429850 5:-16086101 MsG0580025261.01.T01:CDS
GAAGATGCTTCTTTCTGGGT+TGG 0.431077 5:+16089179 None:intergenic
GGTTCGGTTGGAGTCTGATT+TGG 0.434602 5:-16086182 MsG0580025261.01.T01:CDS
ATGGTTGTTCTGGTTATTGG+TGG 0.435309 5:-16088235 MsG0580025261.01.T01:five_prime_UTR
CGCATGTTGTTTCTGAGGAA+GGG 0.435612 5:+16085809 None:intergenic
TTACACAGGTCTTGATGGTT+CGG 0.436632 5:-16086198 MsG0580025261.01.T01:intron
GATGGACTGGCTGCTGGAAA+AGG 0.441425 5:-16087086 MsG0580025261.01.T01:CDS
TTTATGCTCTTTAATAGGGT+TGG 0.452611 5:+16085285 None:intergenic
ACTGTGACAAGGTCAGTAAT+AGG 0.454634 5:-16085771 MsG0580025261.01.T01:exon
AGTTCCCTTCTCATATGATC+CGG 0.457216 5:+16086057 None:intergenic
ACGCATGTTGTTTCTGAGGA+AGG 0.458296 5:+16085808 None:intergenic
AGTGGTTTCTGAACCCAAAC+GGG 0.459092 5:+16088648 None:intergenic
AAAGCCGATGGACTGGCTGC+TGG 0.467487 5:-16087092 MsG0580025261.01.T01:CDS
GGAACGTGCGTGTGAGCGAT+TGG 0.480052 5:+16089145 None:intergenic
ACCACAACCATTGCCGATCC+AGG 0.481488 5:+16086100 None:intergenic
ACTTATATTGGAGATGCTCT+AGG 0.482634 5:+16085709 None:intergenic
ACAGGTCTTGATGGTTCGGT+TGG 0.484956 5:-16086194 MsG0580025261.01.T01:intron
AGAGTTGAGTGGTGTATCAC+TGG 0.488231 5:-16086131 MsG0580025261.01.T01:CDS
ATTGTTGAGGAATTTCTAGA+AGG 0.489124 5:-16086972 MsG0580025261.01.T01:CDS
AAGTGGTTTCTGAACCCAAA+CGG 0.490292 5:+16088647 None:intergenic
ACATTATACTCAATTAACTT+AGG 0.490907 5:+16086679 None:intergenic
TTGAGAATGTGAACTGGCCA+GGG 0.490986 5:-16085862 MsG0580025261.01.T01:CDS
TATTCTGTGCTCCGCAATGC+AGG 0.492704 5:-16088153 MsG0580025261.01.T01:CDS
ATCGGCAATGGTTGTGGTAA+TGG 0.494253 5:-16086095 MsG0580025261.01.T01:CDS
GAAGAAGACACGCGAGCGGA+AGG 0.497947 5:+16089099 None:intergenic
GGCCAGGGGCTTCTATCGTC+GGG 0.499945 5:-16085847 MsG0580025261.01.T01:CDS
GGTGATACAGGGCCAAATAC+TGG 0.500218 5:-16086864 MsG0580025261.01.T01:CDS
TCTTGCACCACCTTCAATGT+TGG 0.500411 5:-16088716 MsG0580025261.01.T01:five_prime_UTR
TGGCCAGGGGCTTCTATCGT+CGG 0.501105 5:-16085848 MsG0580025261.01.T01:CDS
TGTTATCAAAGCCGATGGAC+TGG 0.502419 5:-16087099 MsG0580025261.01.T01:CDS
GTTCTTGGGGTTACAGCAAA+GGG 0.503275 5:-16085926 MsG0580025261.01.T01:CDS
AGTGACTGAGCAAGATGAAA+GGG 0.507467 5:+16089238 None:intergenic
GTTGAGAATGTGAACTGGCC+AGG 0.508310 5:-16085863 MsG0580025261.01.T01:CDS
AGGCAATATATTCAAGAAGA+AGG 0.509444 5:-16087131 MsG0580025261.01.T01:CDS
GAAAGAAGTTCCAACATTGA+AGG 0.509915 5:+16088706 None:intergenic
TTGAAAGACCTGCAACAAGC+GGG 0.515631 5:+16088013 None:intergenic
AATGCAGGAATCGCCAGCTC+AGG 0.518585 5:-16088138 MsG0580025261.01.T01:CDS
TCTATCGTCGGGATATTGGT+TGG 0.518871 5:-16085836 MsG0580025261.01.T01:CDS
GTTCTGGTTATTGGTGGAGG+AGG 0.519019 5:-16088229 MsG0580025261.01.T01:five_prime_UTR
ATTTGGTGATCCAGAGTGCC+AGG 0.519355 5:-16086653 MsG0580025261.01.T01:intron
GCAAGTCGCATTTCCTGAGC+TGG 0.523866 5:+16088125 None:intergenic
ATATATTGCCTTGCTGCGGA+TGG 0.524592 5:+16087143 None:intergenic
CTGGTCTCCTGGATCGGCAA+TGG 0.526837 5:-16086107 MsG0580025261.01.T01:CDS
GTTCTGCTTGCTGCTTGCAG+GGG 0.528528 5:-16086154 MsG0580025261.01.T01:CDS
ACTTAACTGACCTGGCACTC+TGG 0.532548 5:+16086643 None:intergenic
AGAGCAGCAGCTTCTGCAGA+TGG 0.533817 5:+16087955 None:intergenic
AGGGCCAAATACTGGTGGCA+TGG 0.534097 5:-16086856 MsG0580025261.01.T01:CDS
ACTGGACTGGTCTCCTGGAT+CGG 0.536718 5:-16086113 MsG0580025261.01.T01:CDS
GGCGTGGGACTAGTTGTTGT+GGG 0.536832 5:-16088045 MsG0580025261.01.T01:CDS
TCCTTGGTTAAAATAGGAGC+GGG 0.537789 5:+16086822 None:intergenic
ATATGCTTCTTCAAGTGTCA+TGG 0.538051 5:+16087052 None:intergenic
TATATTGCCTTGCTGCGGAT+GGG 0.542430 5:+16087144 None:intergenic
TGTTCTTGGGGTTACAGCAA+AGG 0.545679 5:-16085927 MsG0580025261.01.T01:CDS
GGGCCAAATACTGGTGGCAT+GGG 0.551071 5:-16086855 MsG0580025261.01.T01:CDS
TCAGAAACAACATGCGTCAA+AGG 0.552746 5:-16085802 MsG0580025261.01.T01:CDS
GAGTGACTGAGCAAGATGAA+AGG 0.558957 5:+16089237 None:intergenic
TTCTTCAAGTGTCATGGCAA+CGG 0.559738 5:+16087058 None:intergenic
GGGCGTGGGACTAGTTGTTG+TGG 0.565350 5:-16088046 MsG0580025261.01.T01:CDS
TGGTCCTGAGCTGATTCTAG+TGG 0.566864 5:+16086903 None:intergenic
GTTGTGGTAATGGCAAGTAA+AGG 0.567397 5:-16086085 MsG0580025261.01.T01:CDS
AGGTTGTCGCGTCATTGTTG+AGG 0.572031 5:-16086985 MsG0580025261.01.T01:CDS
GTTCCCTTCTCATATGATCC+GGG 0.573231 5:+16086058 None:intergenic
AGCTGGCGATTCCTGCATTG+CGG 0.574143 5:+16088142 None:intergenic
AGCACAGAATACAGTATCAC+AGG 0.576758 5:+16088165 None:intergenic
TCAGACCTTGATGTTTGTGA+TGG 0.577116 5:-16088099 MsG0580025261.01.T01:CDS
GCGGAAGGAAAGAGATGAAG+CGG 0.578229 5:+16089114 None:intergenic
CGTGCGTGTGAGCGATTGGA+TGG 0.581396 5:+16089149 None:intergenic
GTATGATATTCCAACTGCTA+AGG 0.581971 5:-16087893 MsG0580025261.01.T01:intron
ATGGCAAGTAAAGGATATCC+CGG 0.582009 5:-16086076 MsG0580025261.01.T01:CDS
GATATCAAGATATTCCATGC+TGG 0.584948 5:-16085995 MsG0580025261.01.T01:CDS
AGTTGATTCAATGCTGGTGA+AGG 0.586222 5:-16087024 MsG0580025261.01.T01:CDS
AAGAAAGATTTATTGCAACT+GGG 0.587784 5:-16085955 MsG0580025261.01.T01:CDS
CACTTTGCTATGCGTTACAA+CGG 0.589760 5:-16088195 MsG0580025261.01.T01:CDS
AGAAGACAGACCTTAGCAGT+TGG 0.591379 5:+16087883 None:intergenic
GCTCAGGACCATAAGAGAGT+TGG 0.593929 5:-16086891 MsG0580025261.01.T01:CDS
GAAACTTGATGGTTAATGCA+TGG 0.594873 5:+16088674 None:intergenic
AGCATCTCCAATATAAGTGA+GGG 0.596396 5:-16085704 MsG0580025261.01.T01:three_prime_UTR
AAGCTGTTGAGAATGTGAAC+TGG 0.600765 5:-16085868 MsG0580025261.01.T01:CDS
CCAATTGTTATCAAAGCCGA+TGG 0.603526 5:-16087104 MsG0580025261.01.T01:CDS
TTCCTTGGTTAAAATAGGAG+CGG 0.605639 5:+16086821 None:intergenic
ATATCCCGGATCATATGAGA+AGG 0.606039 5:-16086062 MsG0580025261.01.T01:CDS
TGAAGCAGTTGATTCAATGC+TGG 0.611354 5:-16087030 MsG0580025261.01.T01:CDS
TGAGTGGTGTATCACTGGAC+TGG 0.613928 5:-16086126 MsG0580025261.01.T01:CDS
TTTGACGCATGTTGTTTCTG+AGG 0.613959 5:+16085804 None:intergenic
AATTCCACTAGAATCAGCTC+AGG 0.614376 5:-16086907 MsG0580025261.01.T01:CDS
GAAAGATTTATTGCAACTGG+GGG 0.616884 5:-16085953 MsG0580025261.01.T01:CDS
TCTGCAGATGGACCAAAAGT+CGG 0.618111 5:+16087967 None:intergenic
CTGCACCATCACAAACATCA+AGG 0.618468 5:+16088094 None:intergenic
AATCTGAAGCAGTTCCAGCA+TGG 0.624986 5:+16085981 None:intergenic
TGAAAGACCTGCAACAAGCG+GGG 0.627266 5:+16088014 None:intergenic
TTTGAAAGACCTGCAACAAG+CGG 0.627926 5:+16088012 None:intergenic
AGAAAGATTTATTGCAACTG+GGG 0.628668 5:-16085954 MsG0580025261.01.T01:CDS
TTGAATATATTGCCTTGCTG+CGG 0.629155 5:+16087139 None:intergenic
ATCCCGACGATAGAAGCCCC+TGG 0.630454 5:+16085845 None:intergenic
TTGCTGTAACCCCAAGAACA+CGG 0.631724 5:+16085930 None:intergenic
GAGTTGGTGATGGTGATACA+GGG 0.632112 5:-16086875 MsG0580025261.01.T01:CDS
GAGCATCTCCAATATAAGTG+AGG 0.634649 5:-16085705 MsG0580025261.01.T01:three_prime_UTR
TTATTCCTAAGAAGAAAGGA+TGG 0.635183 5:-16088254 MsG0580025261.01.T01:intron
GCTTGCAGGGGAGAGTTGAG+TGG 0.637437 5:-16086142 MsG0580025261.01.T01:CDS
AGAAGTTCCAACATTGAAGG+TGG 0.645826 5:+16088709 None:intergenic
GACCATAAGAGAGTTGGTGA+TGG 0.648658 5:-16086885 MsG0580025261.01.T01:CDS
GTTGATTCAATGCTGGTGAA+GGG 0.658991 5:-16087023 MsG0580025261.01.T01:CDS
TATCCCGGATCATATGAGAA+GGG 0.670919 5:-16086061 MsG0580025261.01.T01:CDS
TGAGAATGTGAACTGGCCAG+GGG 0.676086 5:-16085861 MsG0580025261.01.T01:CDS
AAAGGGAAATGATCTCGAAG+AGG 0.685275 5:-16085909 MsG0580025261.01.T01:CDS
TTACAGACCCATCCGCAGCA+AGG 0.690175 5:-16087151 MsG0580025261.01.T01:CDS
AGGTGTAAACTACTGTGACA+AGG 0.691758 5:-16085782 MsG0580025261.01.T01:exon
AGGGTTGGCATAGATAACCC+AGG 0.694290 5:+16085300 None:intergenic
CAGAATACAGTATCACAGGA+CGG 0.701522 5:+16088169 None:intergenic
GATACAGGGCCAAATACTGG+TGG 0.702243 5:-16086861 MsG0580025261.01.T01:CDS
TCTTGAAGAAGACACGCGAG+CGG 0.710565 5:+16089095 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTCAAGTTTTTAATAAA+TGG + Chr5:16085879-16085898 None:intergenic 10.0%
!!! AATTCAAGTTTTTAATAAAT+GGG + Chr5:16085878-16085897 None:intergenic 10.0%
!! TCTTTCAAATTATTTAGTTA+AGG - Chr5:16086481-16086500 MsG0580025261.01.T01:intron 15.0%
!!! AACATTTTTAAAAGAACAAA+AGG + Chr5:16088057-16088076 None:intergenic 15.0%
!!! ACATTTTTAAAAGAACAAAA+GGG + Chr5:16088056-16088075 None:intergenic 15.0%
!!! TCTTAATATTTTTATTAGTC+AGG - Chr5:16087123-16087142 MsG0580025261.01.T01:CDS 15.0%
!! AACAATCAATAACAGTTAAT+TGG - Chr5:16088739-16088758 MsG0580025261.01.T01:intron 20.0%
!! AATATCATTCCAATTAAACA+AGG + Chr5:16086657-16086676 None:intergenic 20.0%
!! ACATTATACTCAATTAACTT+AGG + Chr5:16087803-16087822 None:intergenic 20.0%
!! ATATCATTCCAATTAAACAA+GGG + Chr5:16086656-16086675 None:intergenic 20.0%
!! CATTCAAAACTAAATTCTTT+GGG - Chr5:16085540-16085559 MsG0580025261.01.T01:intron 20.0%
!! TAATAAATAGAAAGCGAAAA+AGG + Chr5:16085629-16085648 None:intergenic 20.0%
!! TATCTTTATGCTCTTTAATA+GGG + Chr5:16088951-16088970 None:intergenic 20.0%
!! TCATTCAAAACTAAATTCTT+TGG - Chr5:16085539-16085558 MsG0580025261.01.T01:intron 20.0%
!!! AAACTGTTTAATTTTGAAAC+AGG - Chr5:16085730-16085749 MsG0580025261.01.T01:three_prime_UTR 20.0%
!!! AATATTTTTATTAGTCAGGT+TGG - Chr5:16087127-16087146 MsG0580025261.01.T01:CDS 20.0%
!!! ACAATGTATTTCAATTTTCA+CGG + Chr5:16087902-16087921 None:intergenic 20.0%
!!! ATTTTTTTTTTGTCTGCATT+TGG - Chr5:16085484-16085503 MsG0580025261.01.T01:intron 20.0%
!!! TTAATTGGAATGATATTTTG+TGG - Chr5:16086660-16086679 MsG0580025261.01.T01:CDS 20.0%
!!! TTTTGTATAACAGAATTGAT+AGG - Chr5:16088831-16088850 MsG0580025261.01.T01:intron 20.0%
!!! TTTTTTTTTTGTCTGCATTT+GGG - Chr5:16085485-16085504 MsG0580025261.01.T01:intron 20.0%
! AAGAAAGATTTATTGCAACT+GGG - Chr5:16088524-16088543 MsG0580025261.01.T01:five_prime_UTR 25.0%
! AGTATTTGTAATTGTAATGC+TGG - Chr5:16087057-16087076 MsG0580025261.01.T01:CDS 25.0%
! ATTACAAGATTCATCAACTA+TGG + Chr5:16088805-16088824 None:intergenic 25.0%
! CAAAACATTTGAAAACACTT+TGG + Chr5:16085938-16085957 None:intergenic 25.0%
! CTAAGTTGTTTATACAAACA+TGG + Chr5:16086758-16086777 None:intergenic 25.0%
! CTATAGTTATCATATATGCA+TGG - Chr5:16087971-16087990 MsG0580025261.01.T01:CDS 25.0%
! GAAATGATGCATATAACTAA+TGG - Chr5:16087163-16087182 MsG0580025261.01.T01:CDS 25.0%
! GTATCTTTATGCTCTTTAAT+AGG + Chr5:16088952-16088971 None:intergenic 25.0%
! TCAAATTATTTAGTTAAGGC+TGG - Chr5:16086485-16086504 MsG0580025261.01.T01:intron 25.0%
! TCCATTATAAGTAAACACTA+TGG + Chr5:16087285-16087304 None:intergenic 25.0%
! TGGAATAAAGAGAACAAATA+AGG + Chr5:16087205-16087224 None:intergenic 25.0%
! TTCTCTTTATTCCATGTATA+TGG - Chr5:16087211-16087230 MsG0580025261.01.T01:intron 25.0%
!! AGTTTTTAATAAATGGGTAG+AGG + Chr5:16085872-16085891 None:intergenic 25.0%
!! CTAGTACTGAACAAAATTAA+GGG + Chr5:16086733-16086752 None:intergenic 25.0%
!! GTTAAAGTCTAGAACTTATA+AGG - Chr5:16087920-16087939 MsG0580025261.01.T01:CDS 25.0%
!! TGTACTGATGTATATTCAAA+AGG + Chr5:16086047-16086066 None:intergenic 25.0%
!!! AGTTTTAATTGAACCTTGTA+GGG + Chr5:16087033-16087052 None:intergenic 25.0%
!!! TTCCTTTTGAAATTTTACAC+AGG - Chr5:16088267-16088286 MsG0580025261.01.T01:intron 25.0%
!!! TTGTTCACTTTTCTTTGTTT+TGG - Chr5:16088109-16088128 MsG0580025261.01.T01:CDS 25.0%
AATAGAAAGCGAAAAAGGAT+AGG + Chr5:16085624-16085643 None:intergenic 30.0%
AATCACTTGTGAGACTATTT+GGG + Chr5:16086971-16086990 None:intergenic 30.0%
AATTTATGACTTAACTGACC+TGG + Chr5:16087847-16087866 None:intergenic 30.0%
AGAAAGATTTATTGCAACTG+GGG - Chr5:16088525-16088544 MsG0580025261.01.T01:five_prime_UTR 30.0%
AGGCAATATATTCAAGAAGA+AGG - Chr5:16087348-16087367 MsG0580025261.01.T01:intron 30.0%
AGTCAGTAGTTAAGATATGT+TGG - Chr5:16087999-16088018 MsG0580025261.01.T01:CDS 30.0%
AGTTCAATGTCAACTTCTTT+AGG + Chr5:16089224-16089243 None:intergenic 30.0%
ATAGAAAGCGAAAAAGGATA+GGG + Chr5:16085623-16085642 None:intergenic 30.0%
ATCAACCAATGCAAAAAATG+AGG + Chr5:16087541-16087560 None:intergenic 30.0%
ATTATCATGCCAACAGTAAA+AGG - Chr5:16087705-16087724 MsG0580025261.01.T01:intron 30.0%
ATTGAGTATAATGTGCGATT+TGG - Chr5:16087809-16087828 MsG0580025261.01.T01:intron 30.0%
CAGTACATGTAAAACCAAAA+AGG - Chr5:16086060-16086079 MsG0580025261.01.T01:CDS 30.0%
CTTATGATTGAGAAAAAGTC+TGG - Chr5:16087773-16087792 MsG0580025261.01.T01:intron 30.0%
GAAGAAAGATTTATTGCAAC+TGG - Chr5:16088523-16088542 MsG0580025261.01.T01:five_prime_UTR 30.0%
GAATCGAAAACTTACTTGAT+TGG + Chr5:16085415-16085434 None:intergenic 30.0%
GACCTGTGTAAAATTTCAAA+AGG + Chr5:16088272-16088291 None:intergenic 30.0%
GCCATAGTGTTTACTTATAA+TGG - Chr5:16087281-16087300 MsG0580025261.01.T01:intron 30.0%
GGAACTTCAATCTATAGTAA+TGG - Chr5:16087677-16087696 MsG0580025261.01.T01:intron 30.0%
GTAGATAAGTTGTGATAAGT+CGG - Chr5:16086997-16087016 MsG0580025261.01.T01:CDS 30.0%
TAATCACTTGTGAGACTATT+TGG + Chr5:16086972-16086991 None:intergenic 30.0%
TACTATAGATTGAAGTTCCT+TGG + Chr5:16087676-16087695 None:intergenic 30.0%
TCGATGACACAAATTGTATT+AGG - Chr5:16087945-16087964 MsG0580025261.01.T01:CDS 30.0%
TGAAGTTCCTTGGTTAAAAT+AGG + Chr5:16087666-16087685 None:intergenic 30.0%
TTATTCCTAAGAAGAAAGGA+TGG - Chr5:16086225-16086244 MsG0580025261.01.T01:intron 30.0%
TTTATGCTCTTTAATAGGGT+TGG + Chr5:16088947-16088966 None:intergenic 30.0%
! AAATTTTACACAGGTCTTGA+TGG - Chr5:16088276-16088295 MsG0580025261.01.T01:intron 30.0%
! AATGAAAGTTGTGAAAGTGT+CGG + Chr5:16088192-16088211 None:intergenic 30.0%
! ATAAATGGGTAGAGGAATTT+TGG + Chr5:16085864-16085883 None:intergenic 30.0%
! ATTGTTGAGGAATTTCTAGA+AGG - Chr5:16087507-16087526 MsG0580025261.01.T01:intron 30.0%
! CCTAGTACTGAACAAAATTA+AGG + Chr5:16086734-16086753 None:intergenic 30.0%
! CCTTAATTTTGTTCAGTACT+AGG - Chr5:16086731-16086750 MsG0580025261.01.T01:intron 30.0%
! TTTTCATAAACTCTCCAAGA+TGG + Chr5:16086898-16086917 None:intergenic 30.0%
!! AGGAATTTTGGAAAGTAAAG+TGG + Chr5:16085852-16085871 None:intergenic 30.0%
!!! AGTTTTAGAAGATGAAGTAG+CGG + Chr5:16085715-16085734 None:intergenic 30.0%
!!! CAGTTTTAATTGAACCTTGT+AGG + Chr5:16087034-16087053 None:intergenic 30.0%
!!! TCATTTTTTGCATTGGTTGA+TGG - Chr5:16087540-16087559 MsG0580025261.01.T01:intron 30.0%
AAACAAAAACTGTCTCACCT+AGG - Chr5:16088894-16088913 MsG0580025261.01.T01:intron 35.0%
AAACACTATGGCAAAAACCT+GGG + Chr5:16087273-16087292 None:intergenic 35.0%
AACAACCATCCTTTCTTCTT+AGG + Chr5:16086233-16086252 None:intergenic 35.0%
ACTTATATTGGAGATGCTCT+AGG + Chr5:16088773-16088792 None:intergenic 35.0%
AGCATCTCCAATATAAGTGA+GGG - Chr5:16088775-16088794 MsG0580025261.01.T01:intron 35.0%
AGTTCAATGTCAACTTCTCT+AGG + Chr5:16088974-16088993 None:intergenic 35.0%
ATATGCTTCTTCAAGTGTCA+TGG + Chr5:16087430-16087449 None:intergenic 35.0%
ATCAAGTTTCTAACCCGTTT+GGG - Chr5:16085818-16085837 MsG0580025261.01.T01:CDS 35.0%
ATCAGAGTAACGAGAATCAA+TGG + Chr5:16085691-16085710 None:intergenic 35.0%
ATGAATACGTGAACTGCTTA+TGG + Chr5:16085273-16085292 None:intergenic 35.0%
GAAAGAAGTTCCAACATTGA+AGG + Chr5:16085776-16085795 None:intergenic 35.0%
GAAAGATTTATTGCAACTGG+GGG - Chr5:16088526-16088545 MsG0580025261.01.T01:five_prime_UTR 35.0%
GATATCAAGATATTCCATGC+TGG - Chr5:16088484-16088503 MsG0580025261.01.T01:intron 35.0%
GCATGGAATATCTTGATATC+TGG + Chr5:16088484-16088503 None:intergenic 35.0%
GTATGATATTCCAACTGCTA+AGG - Chr5:16086586-16086605 MsG0580025261.01.T01:intron 35.0%
GTGCTTATTCCTAAGAAGAA+AGG - Chr5:16086221-16086240 MsG0580025261.01.T01:intron 35.0%
TAAACACTATGGCAAAAACC+TGG + Chr5:16087274-16087293 None:intergenic 35.0%
TCAGAGTAACGAGAATCAAT+GGG + Chr5:16085690-16085709 None:intergenic 35.0%
TGAAGAAGATGCTTCTTTCT+GGG + Chr5:16085307-16085326 None:intergenic 35.0%
TGAATACGTGAACTGCTTAT+GGG + Chr5:16085272-16085291 None:intergenic 35.0%
TGGATTACCCTCACTTATAT+TGG + Chr5:16088785-16088804 None:intergenic 35.0%
TTCCTTGGTTAAAATAGGAG+CGG + Chr5:16087661-16087680 None:intergenic 35.0%
TTGAAGAAGATGCTTCTTTC+TGG + Chr5:16085308-16085327 None:intergenic 35.0%
TTGAATATATTGCCTTGCTG+CGG + Chr5:16087343-16087362 None:intergenic 35.0%
! ACGATTGACCCTTGTTTAAT+TGG - Chr5:16086645-16086664 MsG0580025261.01.T01:intron 35.0%
! AGAGATTGATTTCTATGCAC+TGG + Chr5:16086095-16086114 None:intergenic 35.0%
! GAAACTTGATGGTTAATGCA+TGG + Chr5:16085808-16085827 None:intergenic 35.0%
! TTTGTTGGTGTTTGTATGCT+GGG - Chr5:16087750-16087769 MsG0580025261.01.T01:intron 35.0%
!! TGCATTTGGGATTAGTGTTT+TGG - Chr5:16085498-16085517 MsG0580025261.01.T01:intron 35.0%
!!! AGAAGCCTCATTTTTTGCAT+TGG - Chr5:16087533-16087552 MsG0580025261.01.T01:intron 35.0%
AAAGGGAAATGATCTCGAAG+AGG - Chr5:16088570-16088589 MsG0580025261.01.T01:five_prime_UTR 40.0%
AAGCTGTTGAGAATGTGAAC+TGG - Chr5:16088611-16088630 MsG0580025261.01.T01:five_prime_UTR 40.0%
AAGTGGTTTCTGAACCCAAA+CGG + Chr5:16085835-16085854 None:intergenic 40.0%
AATTCCACTAGAATCAGCTC+AGG - Chr5:16087572-16087591 MsG0580025261.01.T01:intron 40.0%
ACTGTGACAAGGTCAGTAAT+AGG - Chr5:16088708-16088727 MsG0580025261.01.T01:five_prime_UTR 40.0%
AGAAGAAAGGATGGTTGTTC+TGG - Chr5:16086234-16086253 MsG0580025261.01.T01:intron 40.0%
AGAAGTTCCAACATTGAAGG+TGG + Chr5:16085773-16085792 None:intergenic 40.0%
AGCACAGAATACAGTATCAC+AGG + Chr5:16086317-16086336 None:intergenic 40.0%
AGCGAAAAAGGATAGGGTTT+AGG + Chr5:16085617-16085636 None:intergenic 40.0%
AGGAAAACAGACAAACAGGA+AGG + Chr5:16087250-16087269 None:intergenic 40.0%
AGGGAAGAACACCATATACA+TGG + Chr5:16087225-16087244 None:intergenic 40.0%
AGGTGTAAACTACTGTGACA+AGG - Chr5:16088697-16088716 MsG0580025261.01.T01:five_prime_UTR 40.0%
AGTGACTGAGCAAGATGAAA+GGG + Chr5:16085244-16085263 None:intergenic 40.0%
AGTTCCCTTCTCATATGATC+CGG + Chr5:16088425-16088444 None:intergenic 40.0%
ATATCCCGGATCATATGAGA+AGG - Chr5:16088417-16088436 MsG0580025261.01.T01:intron 40.0%
ATGGCAAGTAAAGGATATCC+CGG - Chr5:16088403-16088422 MsG0580025261.01.T01:intron 40.0%
ATTTGCACGAACAGAGAACT+TGG + Chr5:16085594-16085613 None:intergenic 40.0%
CAGAATACAGTATCACAGGA+CGG + Chr5:16086313-16086332 None:intergenic 40.0%
CATCAAGTTTCTAACCCGTT+TGG - Chr5:16085817-16085836 MsG0580025261.01.T01:CDS 40.0%
CCAATTGTTATCAAAGCCGA+TGG - Chr5:16087375-16087394 MsG0580025261.01.T01:intron 40.0%
GAGCATCTCCAATATAAGTG+AGG - Chr5:16088774-16088793 MsG0580025261.01.T01:intron 40.0%
GGGTCAATCGTTGATATGTT+TGG + Chr5:16086636-16086655 None:intergenic 40.0%
GTAAAAGGAATGTCAGCAGA+AGG - Chr5:16087720-16087739 MsG0580025261.01.T01:intron 40.0%
TATCCCGGATCATATGAGAA+GGG - Chr5:16088418-16088437 MsG0580025261.01.T01:intron 40.0%
TCAGAAACAACATGCGTCAA+AGG - Chr5:16088677-16088696 MsG0580025261.01.T01:five_prime_UTR 40.0%
TCAGACCTTGATGTTTGTGA+TGG - Chr5:16086380-16086399 MsG0580025261.01.T01:intron 40.0%
TCCTTGGTTAAAATAGGAGC+GGG + Chr5:16087660-16087679 None:intergenic 40.0%
TTCTTCAAGTGTCATGGCAA+CGG + Chr5:16087424-16087443 None:intergenic 40.0%
TTTGAAAGACCTGCAACAAG+CGG + Chr5:16086470-16086489 None:intergenic 40.0%
! ACTGGCAGTGTAAACCTTTT+TGG + Chr5:16086077-16086096 None:intergenic 40.0%
! AGGATGGTTGTTCTGGTTAT+TGG - Chr5:16086241-16086260 MsG0580025261.01.T01:intron 40.0%
! AGTTGATTCAATGCTGGTGA+AGG - Chr5:16087455-16087474 MsG0580025261.01.T01:intron 40.0%
! ATGGTTGTTCTGGTTATTGG+TGG - Chr5:16086244-16086263 MsG0580025261.01.T01:intron 40.0%
! CACTTTGCTATGCGTTACAA+CGG - Chr5:16086284-16086303 MsG0580025261.01.T01:intron 40.0%
! CTAGGTGATCTTTTATGCCT+GGG - Chr5:16088912-16088931 MsG0580025261.01.T01:intron 40.0%
! GCTGACATTCCTTTTACTGT+TGG + Chr5:16087717-16087736 None:intergenic 40.0%
! GTTGATTCAATGCTGGTGAA+GGG - Chr5:16087456-16087475 MsG0580025261.01.T01:intron 40.0%
! GTTTGTTGGTGTTTGTATGC+TGG - Chr5:16087749-16087768 MsG0580025261.01.T01:intron 40.0%
! TGAAGCAGTTGATTCAATGC+TGG - Chr5:16087449-16087468 MsG0580025261.01.T01:intron 40.0%
! TTACACAGGTCTTGATGGTT+CGG - Chr5:16088281-16088300 MsG0580025261.01.T01:intron 40.0%
!! AGAGTCATTTTGCCGGAAAT+GGG - Chr5:16086412-16086431 MsG0580025261.01.T01:intron 40.0%
!! CAAACGGGTTAGAAACTTGA+TGG + Chr5:16085819-16085838 None:intergenic 40.0%
!! CCATCGGCTTTGATAACAAT+TGG + Chr5:16087378-16087397 None:intergenic 40.0%
!! GTTGTGGTAATGGCAAGTAA+AGG - Chr5:16088394-16088413 MsG0580025261.01.T01:intron 40.0%
!! GTTGTTTTCGTAAGCCATCT+TGG - Chr5:16086881-16086900 MsG0580025261.01.T01:CDS 40.0%
!! TAGAGTCATTTTGCCGGAAA+TGG - Chr5:16086411-16086430 MsG0580025261.01.T01:intron 40.0%
!! TTTGACGCATGTTGTTTCTG+AGG + Chr5:16088678-16088697 None:intergenic 40.0%
AACAGACAAACAGGAAGGAC+AGG + Chr5:16087245-16087264 None:intergenic 45.0%
ACAGACAAACAGGAAGGACA+GGG + Chr5:16087244-16087263 None:intergenic 45.0%
AGAAGACAGACCTTAGCAGT+TGG + Chr5:16086599-16086618 None:intergenic 45.0%
AGAGATGAAGCGGCCAAAAA+TGG + Chr5:16085358-16085377 None:intergenic 45.0%
AGAGTTGAGTGGTGTATCAC+TGG - Chr5:16088348-16088367 MsG0580025261.01.T01:intron 45.0%
AGTGGTTTCTGAACCCAAAC+GGG + Chr5:16085834-16085853 None:intergenic 45.0%
ATATATTGCCTTGCTGCGGA+TGG + Chr5:16087339-16087358 None:intergenic 45.0%
ATCGGCAATGGTTGTGGTAA+TGG - Chr5:16088384-16088403 MsG0580025261.01.T01:intron 45.0%
ATTCTTCATCTCTTTCGCCG+TGG - Chr5:16085431-16085450 MsG0580025261.01.T01:intron 45.0%
CACCATCACCAACTCTCTTA+TGG + Chr5:16087599-16087618 None:intergenic 45.0%
CCAGGCATAAAAGATCACCT+AGG + Chr5:16088914-16088933 None:intergenic 45.0%
CTCAAATCGAACACAGTCCA+CGG + Chr5:16085451-16085470 None:intergenic 45.0%
CTGCACCATCACAAACATCA+AGG + Chr5:16086388-16086407 None:intergenic 45.0%
GAAGATGCTTCTTTCTGGGT+TGG + Chr5:16085303-16085322 None:intergenic 45.0%
GAGTGACTGAGCAAGATGAA+AGG + Chr5:16085245-16085264 None:intergenic 45.0%
GCAGAAGGTCGTAAGTTTGT+TGG - Chr5:16087735-16087754 MsG0580025261.01.T01:intron 45.0%
GTTCCCTTCTCATATGATCC+GGG + Chr5:16088424-16088443 None:intergenic 45.0%
GTTCTTGGGGTTACAGCAAA+GGG - Chr5:16088553-16088572 MsG0580025261.01.T01:five_prime_UTR 45.0%
TATATTGCCTTGCTGCGGAT+GGG + Chr5:16087338-16087357 None:intergenic 45.0%
TCTATCGTCGGGATATTGGT+TGG - Chr5:16088643-16088662 MsG0580025261.01.T01:five_prime_UTR 45.0%
TCTGCAGATGGACCAAAAGT+CGG + Chr5:16086515-16086534 None:intergenic 45.0%
TCTTGCACCACCTTCAATGT+TGG - Chr5:16085763-16085782 MsG0580025261.01.T01:three_prime_UTR 45.0%
TGGGAGGAAAACAGACAAAC+AGG + Chr5:16087254-16087273 None:intergenic 45.0%
TGTGATAAGTCGGTCCAAAC+AGG - Chr5:16087007-16087026 MsG0580025261.01.T01:CDS 45.0%
TGTTATCAAAGCCGATGGAC+TGG - Chr5:16087380-16087399 MsG0580025261.01.T01:intron 45.0%
TGTTCTTGGGGTTACAGCAA+AGG - Chr5:16088552-16088571 MsG0580025261.01.T01:five_prime_UTR 45.0%
TTGAAAGACCTGCAACAAGC+GGG + Chr5:16086469-16086488 None:intergenic 45.0%
TTGAGAATGTGAACTGGCCA+GGG - Chr5:16088617-16088636 MsG0580025261.01.T01:five_prime_UTR 45.0%
TTGCTGTAACCCCAAGAACA+CGG + Chr5:16088552-16088571 None:intergenic 45.0%
! AAGGCTGGAATTCCGACTTT+TGG - Chr5:16086500-16086519 MsG0580025261.01.T01:intron 45.0%
! AATCTGAAGCAGTTCCAGCA+TGG + Chr5:16088501-16088520 None:intergenic 45.0%
! ATGCTGGTGAAGGGTGATTT+TGG - Chr5:16087465-16087484 MsG0580025261.01.T01:intron 45.0%
! CCTAGGTGATCTTTTATGCC+TGG - Chr5:16088911-16088930 MsG0580025261.01.T01:intron 45.0%
! GTTGTTCTGGTTATTGGTGG+AGG - Chr5:16086247-16086266 MsG0580025261.01.T01:intron 45.0%
! TCACACGCACGTTCCATTTT+TGG - Chr5:16085342-16085361 MsG0580025261.01.T01:intron 45.0%
! TGTTTGTCTGTTTTCCTCCC+AGG - Chr5:16087253-16087272 MsG0580025261.01.T01:intron 45.0%
!! ACGCATGTTGTTTCTGAGGA+AGG + Chr5:16088674-16088693 None:intergenic 45.0%
!! AGAGTTGGTGATGGTGATAC+AGG - Chr5:16087603-16087622 MsG0580025261.01.T01:intron 45.0%
!! CAGCTGTAGAGTCATTTTGC+CGG - Chr5:16086405-16086424 MsG0580025261.01.T01:intron 45.0%
!! CGCATGTTGTTTCTGAGGAA+GGG + Chr5:16088673-16088692 None:intergenic 45.0%
!! CTTCTTTCTGGGTTGGTTTG+AGG + Chr5:16085296-16085315 None:intergenic 45.0%
!! GACCATAAGAGAGTTGGTGA+TGG - Chr5:16087594-16087613 MsG0580025261.01.T01:intron 45.0%
!! GAGTCATTTTGCCGGAAATG+GGG - Chr5:16086413-16086432 MsG0580025261.01.T01:intron 45.0%
!! GAGTTGGTGATGGTGATACA+GGG - Chr5:16087604-16087623 MsG0580025261.01.T01:intron 45.0%
!!! AAGGGTGATTTTGGTTCTGC+AGG - Chr5:16087474-16087493 MsG0580025261.01.T01:intron 45.0%
!!! TCCCGCTCCTATTTTAACCA+AGG - Chr5:16087656-16087675 MsG0580025261.01.T01:intron 45.0%
ACTTAACTGACCTGGCACTC+TGG + Chr5:16087839-16087858 None:intergenic 50.0%
AGGTTGTCGCGTCATTGTTG+AGG - Chr5:16087494-16087513 MsG0580025261.01.T01:intron 50.0%
CAACACGCTCAGCTTCTTCA+AGG + Chr5:16088459-16088478 None:intergenic 50.0%
CACTATGGCAAAAACCTGGG+AGG + Chr5:16087270-16087289 None:intergenic 50.0%
GATACAGGGCCAAATACTGG+TGG - Chr5:16087618-16087637 MsG0580025261.01.T01:intron 50.0%
GCGGAAGGAAAGAGATGAAG+CGG + Chr5:16085368-16085387 None:intergenic 50.0%
GCTCAGGACCATAAGAGAGT+TGG - Chr5:16087588-16087607 MsG0580025261.01.T01:intron 50.0%
GGCTTCTATCGTCGGGATAT+TGG - Chr5:16088639-16088658 MsG0580025261.01.T01:five_prime_UTR 50.0%
GGTGATACAGGGCCAAATAC+TGG - Chr5:16087615-16087634 MsG0580025261.01.T01:intron 50.0%
GTTGAGAATGTGAACTGGCC+AGG - Chr5:16088616-16088635 MsG0580025261.01.T01:five_prime_UTR 50.0%
TATTCTGTGCTCCGCAATGC+AGG - Chr5:16086326-16086345 MsG0580025261.01.T01:intron 50.0%
TCTTGAAGAAGACACGCGAG+CGG + Chr5:16085387-16085406 None:intergenic 50.0%
TGAAAGACCTGCAACAAGCG+GGG + Chr5:16086468-16086487 None:intergenic 50.0%
TGAACCTTGTAGGGCCTGTT+TGG + Chr5:16087024-16087043 None:intergenic 50.0%
TGAGAATGTGAACTGGCCAG+GGG - Chr5:16088618-16088637 MsG0580025261.01.T01:five_prime_UTR 50.0%
TGAGTGGTGTATCACTGGAC+TGG - Chr5:16088353-16088372 MsG0580025261.01.T01:intron 50.0%
! AAGTTCTGCTTGCTGCTTGC+AGG - Chr5:16088323-16088342 MsG0580025261.01.T01:intron 50.0%
! AGGGTTGGCATAGATAACCC+AGG + Chr5:16088932-16088951 None:intergenic 50.0%
! AGTTCTGCTTGCTGCTTGCA+GGG - Chr5:16088324-16088343 MsG0580025261.01.T01:intron 50.0%
! ATTTGGTGATCCAGAGTGCC+AGG - Chr5:16087826-16087845 MsG0580025261.01.T01:intron 50.0%
! GGTTCGGTTGGAGTCTGATT+TGG - Chr5:16088297-16088316 MsG0580025261.01.T01:intron 50.0%
! GTTCTGGTTATTGGTGGAGG+AGG - Chr5:16086250-16086269 MsG0580025261.01.T01:intron 50.0%
! TGGTCCTGAGCTGATTCTAG+TGG + Chr5:16087579-16087598 None:intergenic 50.0%
! TTTTCCAGCAGCCAGTCCAT+CGG + Chr5:16087394-16087413 None:intergenic 50.0%
!! ACAGGTCTTGATGGTTCGGT+TGG - Chr5:16088285-16088304 MsG0580025261.01.T01:intron 50.0%
AATGCAGGAATCGCCAGCTC+AGG - Chr5:16086341-16086360 MsG0580025261.01.T01:intron 55.0%
ACCACAACCATTGCCGATCC+AGG + Chr5:16088382-16088401 None:intergenic 55.0%
AGAGCAGCAGCTTCTGCAGA+TGG + Chr5:16086527-16086546 None:intergenic 55.0%
AGCTGGCGATTCCTGCATTG+CGG + Chr5:16086340-16086359 None:intergenic 55.0%
AGGGCCAAATACTGGTGGCA+TGG - Chr5:16087623-16087642 MsG0580025261.01.T01:intron 55.0%
GCAAGTCGCATTTCCTGAGC+TGG + Chr5:16086357-16086376 None:intergenic 55.0%
GCACCCATGCCACCAGTATT+TGG + Chr5:16087630-16087649 None:intergenic 55.0%
GGGCCAAATACTGGTGGCAT+GGG - Chr5:16087624-16087643 MsG0580025261.01.T01:intron 55.0%
TCCTGGATCGGCAATGGTTG+TGG - Chr5:16088378-16088397 MsG0580025261.01.T01:intron 55.0%
TTACAGACCCATCCGCAGCA+AGG - Chr5:16087328-16087347 MsG0580025261.01.T01:intron 55.0%
! ATTTTGCCGGAAATGGGGCG+TGG - Chr5:16086418-16086437 MsG0580025261.01.T01:intron 55.0%
! GCAGAAGCTGCTGCTCTAGA+AGG - Chr5:16086530-16086549 MsG0580025261.01.T01:intron 55.0%
! GTTCTGCTTGCTGCTTGCAG+GGG - Chr5:16088325-16088344 MsG0580025261.01.T01:intron 55.0%
! TTTTGCCGGAAATGGGGCGT+GGG - Chr5:16086419-16086438 MsG0580025261.01.T01:intron 55.0%
!! ACTGGACTGGTCTCCTGGAT+CGG - Chr5:16088366-16088385 MsG0580025261.01.T01:intron 55.0%
!! GATGGACTGGCTGCTGGAAA+AGG - Chr5:16087393-16087412 MsG0580025261.01.T01:intron 55.0%
!! GGCGTGGGACTAGTTGTTGT+GGG - Chr5:16086434-16086453 MsG0580025261.01.T01:intron 55.0%
!! GTATCACTGGACTGGTCTCC+TGG - Chr5:16088361-16088380 MsG0580025261.01.T01:intron 55.0%
AACTGGGGGCCGTGTTCTTG+GGG - Chr5:16088540-16088559 MsG0580025261.01.T01:five_prime_UTR 60.0%
ATCCCGACGATAGAAGCCCC+TGG + Chr5:16088637-16088656 None:intergenic 60.0%
CAACTGGGGGCCGTGTTCTT+GGG - Chr5:16088539-16088558 MsG0580025261.01.T01:five_prime_UTR 60.0%
CGGTCCAAACAGGCCCTACA+AGG - Chr5:16087017-16087036 MsG0580025261.01.T01:CDS 60.0%
CGTGCGTGTGAGCGATTGGA+TGG + Chr5:16085333-16085352 None:intergenic 60.0%
CTAGTCCCACGCCCCATTTC+CGG + Chr5:16086427-16086446 None:intergenic 60.0%
CTGGTCTCCTGGATCGGCAA+TGG - Chr5:16088372-16088391 MsG0580025261.01.T01:intron 60.0%
GAAGAAGACACGCGAGCGGA+AGG + Chr5:16085383-16085402 None:intergenic 60.0%
GCTTGCAGGGGAGAGTTGAG+TGG - Chr5:16088337-16088356 MsG0580025261.01.T01:intron 60.0%
GGAACGTGCGTGTGAGCGAT+TGG + Chr5:16085337-16085356 None:intergenic 60.0%
TGGCCAGGGGCTTCTATCGT+CGG - Chr5:16088631-16088650 MsG0580025261.01.T01:five_prime_UTR 60.0%
!! AAAGCCGATGGACTGGCTGC+TGG - Chr5:16087387-16087406 MsG0580025261.01.T01:intron 60.0%
!! GGGCGTGGGACTAGTTGTTG+TGG - Chr5:16086433-16086452 MsG0580025261.01.T01:intron 60.0%
CCTGCAACAAGCGGGGCTTC+AGG + Chr5:16086461-16086480 None:intergenic 65.0%
GCAACTGGGGGCCGTGTTCT+TGG - Chr5:16088538-16088557 MsG0580025261.01.T01:five_prime_UTR 65.0%
GGCCAGGGGCTTCTATCGTC+GGG - Chr5:16088632-16088651 MsG0580025261.01.T01:five_prime_UTR 65.0%
! CCTGAAGCCCCGCTTGTTGC+AGG - Chr5:16086458-16086477 MsG0580025261.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 16085215 16089286 16085215 ID=MsG0580025261.01;Name=MsG0580025261.01
Chr5 mRNA 16085215 16089286 16085215 ID=MsG0580025261.01.T01;Parent=MsG0580025261.01;Name=MsG0580025261.01.T01;_AED=0.43;_eAED=0.43;_QI=507|0.83|0.71|1|0.5|0.28|7|322|396
Chr5 exon 16085215 16085335 16085215 ID=MsG0580025261.01.T01:exon:18913;Parent=MsG0580025261.01.T01
Chr5 exon 16085586 16086212 16085586 ID=MsG0580025261.01.T01:exon:18912;Parent=MsG0580025261.01.T01
Chr5 exon 16086654 16086716 16086654 ID=MsG0580025261.01.T01:exon:18911;Parent=MsG0580025261.01.T01
Chr5 exon 16086809 16087183 16086809 ID=MsG0580025261.01.T01:exon:18910;Parent=MsG0580025261.01.T01
Chr5 exon 16087894 16088262 16087894 ID=MsG0580025261.01.T01:exon:18909;Parent=MsG0580025261.01.T01
Chr5 exon 16088490 16088749 16088490 ID=MsG0580025261.01.T01:exon:18908;Parent=MsG0580025261.01.T01
Chr5 exon 16089082 16089286 16089082 ID=MsG0580025261.01.T01:exon:18907;Parent=MsG0580025261.01.T01
Chr5 five_prime_UTR 16089082 16089286 16089082 ID=MsG0580025261.01.T01:five_prime_utr;Parent=MsG0580025261.01.T01
Chr5 five_prime_UTR 16088490 16088749 16088490 ID=MsG0580025261.01.T01:five_prime_utr;Parent=MsG0580025261.01.T01
Chr5 five_prime_UTR 16088221 16088262 16088221 ID=MsG0580025261.01.T01:five_prime_utr;Parent=MsG0580025261.01.T01
Chr5 CDS 16087894 16088220 16087894 ID=MsG0580025261.01.T01:cds;Parent=MsG0580025261.01.T01
Chr5 CDS 16086809 16087183 16086809 ID=MsG0580025261.01.T01:cds;Parent=MsG0580025261.01.T01
Chr5 CDS 16086654 16086716 16086654 ID=MsG0580025261.01.T01:cds;Parent=MsG0580025261.01.T01
Chr5 CDS 16085787 16086212 16085787 ID=MsG0580025261.01.T01:cds;Parent=MsG0580025261.01.T01
Chr5 three_prime_UTR 16085586 16085786 16085586 ID=MsG0580025261.01.T01:three_prime_utr;Parent=MsG0580025261.01.T01
Chr5 three_prime_UTR 16085215 16085335 16085215 ID=MsG0580025261.01.T01:three_prime_utr;Parent=MsG0580025261.01.T01
Gene Sequence

>MsG0580025261.01.T01

ATGCACTTTGCTATGCGTTACAACGGTCACCGTCCTGTGATACTGTATTCTGTGCTCCGCAATGCAGGAATCGCCAGCTCAGGAAATGCGACTTGCATCTCAGACCTTGATGTTTGTGATGGTGCAGCTGTAGAGTCATTTTGCCGGAAATGGGGCGTGGGACTAGTTGTTGTGGGACCTGAAGCCCCGCTTGTTGCAGGTCTTTCAAATTATTTAGTTAAGGCTGGAATTCCGACTTTTGGTCCATCTGCAGAAGCTGCTGCTCTAGAAGGTTCTAAGAATTTCATGAAGCATTTGTGTGACAAGTATGATATTCCAACTGCTAAGTACAAAACGTTTACAGACCCATCCGCAGCAAGGCAATATATTCAAGAAGAAGGAGCACCAATTGTTATCAAAGCCGATGGACTGGCTGCTGGAAAAGGAGTTACCGTTGCCATGACACTTGAAGAAGCATATGAAGCAGTTGATTCAATGCTGGTGAAGGGTGATTTTGGTTCTGCAGGTTGTCGCGTCATTGTTGAGGAATTTCTAGAAGGAGAAGAAGCCTCATTTTTTGCATTGGTTGATGGAGAAACTGCAATTCCACTAGAATCAGCTCAGGACCATAAGAGAGTTGGTGATGGTGATACAGGGCCAAATACTGGTGGCATGGGTGCATACTCTCCCGCTCCTATTTTAACCAAGGAACTTCAATCTATAAAAAAGTCTGGCATGCCTAAGTTAATTGAGTATAATGTGCGATTTGGTGATCCAGAGTGCCAGGTCTTGATGGTTCGGTTGGAGTCTGATTTGGTGCAAGTTCTGCTTGCTGCTTGCAGGGGAGAGTTGAGTGGTGTATCACTGGACTGGTCTCCTGGATCGGCAATGGTTGTGGTAATGGCAAGTAAAGGATATCCCGGATCATATGAGAAGGGAACTATAATTGAAAACCTTGAAGAAGCTGAGCGTGTTGCTCCAGATATCAAGATATTCCATGCTGGAACTGCTTCAGATTCTGAAGAAAGATTTATTGCAACTGGGGGCCGTGTTCTTGGGGTTACAGCAAAGGGAAATGATCTCGAAGAGGCATGTAATCGAGCTTATCAAGCTGTTGAGAATGTGAACTGGCCAGGGGCTTCTATCGTCGGGATATTGGTTGGAGAGCCCTTCCTCAGAAACAACATGCGTCAAAGGTGTAAACTACTGTGA
Protein sequence

>MsG0580025261.01.T01

MHFAMRYNGHRPVILYSVLRNAGIASSGNATCISDLDVCDGAAVESFCRKWGVGLVVVGPEAPLVAGLSNYLVKAGIPTFGPSAEAAALEGSKNFMKHLCDKYDIPTAKYKTFTDPSAARQYIQEEGAPIVIKADGLAAGKGVTVAMTLEEAYEAVDSMLVKGDFGSAGCRVIVEEFLEGEEASFFALVDGETAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPILTKELQSIKKSGMPKLIEYNVRFGDPECQVLMVRLESDLVQVLLAACRGELSGVSLDWSPGSAMVVVMASKGYPGSYEKGTIIENLEEAERVAPDIKIFHAGTASDSEERFIATGGRVLGVTAKGNDLEEACNRAYQAVENVNWPGASIVGILVGEPFLRNNMRQRCKLL*