AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015965.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015965.01.T01 MTR_3g080550 77.041 196 15 1 31 226 324 489 6.12e-97 295
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015965.01.T01 AT2G31340 63.462 156 57 0 31 186 331 486 3.91e-66 215

Find 93 sgRNAs with CRISPR-Local

Find 542 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTGATCAATGCAGAATT+TGG 0.143251 3:+77292632 MsG0380015964.01.T01:CDS
CTCACGAATCATTGTAATTT+CGG 0.208655 3:+77297502 MsG0380015965.01.T01:three_prime_UTR
TGTAATTTCGGCTTCAAAAT+AGG 0.212942 3:+77297514 MsG0380015965.01.T01:three_prime_UTR
TTTCAGGTGTGGCTTTAATA+AGG 0.243682 3:+77297270 MsG0380015965.01.T01:intron
AATCCATCAGGGTGCAAATT+AGG 0.249664 3:-77297764 None:intergenic
GCCCATTCCATGCGCAATTT+AGG 0.249917 3:-77292581 None:intergenic
CCCATTCCATGCGCAATTTA+GGG 0.251059 3:-77292580 None:intergenic
GAATAAATAAGATACCATTT+TGG 0.253242 3:+77297711 MsG0380015965.01.T01:three_prime_UTR
GGACCGTTGAAGCACAAATT+TGG 0.254418 3:-77297298 None:intergenic
TGCTTATCTAGCATATTTGC+AGG 0.333657 3:+77291118 MsG0380015964.01.T01:CDS
CTCTGATCAATGCAGAATTT+GGG 0.335256 3:+77292633 MsG0380015964.01.T01:CDS
CTTGTGGGCAACAGTTCTAT+TGG 0.340391 3:+77292693 MsG0380015964.01.T01:CDS
TCAGATGACAAATTACGTTT+TGG 0.349199 3:+77292524 MsG0380015964.01.T01:CDS
CTCAGTTGATTCGATTTCAT+TGG 0.354426 3:+77295112 MsG0380015964.01.T01:CDS
CCCTAAATTGCGCATGGAAT+GGG 0.356304 3:+77292580 MsG0380015964.01.T01:CDS
TCCAATGCTCTATCCATTGC+AGG 0.370299 3:-77292458 None:intergenic
ACAAGTAGACAGCAAGTATT+AGG 0.371267 3:+77295176 MsG0380015964.01.T01:CDS
ATTGCACCCAAGATCCAAAA+TGG 0.371495 3:-77297725 None:intergenic
CAACTTGTAACCATTCTATC+TGG 0.374503 3:-77297602 None:intergenic
ATGGGCAAAGCTTCAGTTGA+TGG 0.380434 3:+77292598 MsG0380015964.01.T01:CDS
ACTTCCTTACACTTCAGATT+AGG 0.391842 3:-77297439 None:intergenic
TCAAATAGATGTCGAGGGTT+TGG 0.394171 3:-77290838 None:intergenic
TTGTAATGAATATGCATGTT+GGG 0.402393 3:+77290319 MsG0380015964.01.T01:intron
AATCCGTCGATCTGAATTGC+TGG 0.404083 3:-77297402 None:intergenic
AGCAAAGTTTACAATCCATC+AGG 0.409559 3:-77297776 None:intergenic
TTCAGGTGTGGCTTTAATAA+GGG 0.413519 3:+77297271 MsG0380015965.01.T01:intron
ACCTGAGCTCCATCCGCTGC+TGG 0.420195 3:-77295086 None:intergenic
GATGTGTGCCTGCTGTTCCT+TGG 0.423736 3:+77295952 MsG0380015965.01.T01:three_prime_UTR
CACTCACAGTGAAACAGAAA+TGG 0.429603 3:-77290372 None:intergenic
TTCATTGGCACAGAATAATA+CGG 0.446581 3:+77295127 MsG0380015964.01.T01:CDS
TATACTTACACACCTTTCCA+TGG 0.451741 3:-77295676 None:intergenic
CTTTCCATGGAATCAGTAGA+AGG 0.471064 3:-77295663 None:intergenic
TATTGGAAAACAGAAGCTAC+TGG 0.476934 3:+77292710 MsG0380015964.01.T01:CDS
ACCCTAAATTGCGCATGGAA+TGG 0.478645 3:+77292579 MsG0380015964.01.T01:CDS
TCCAGCAGCGGATGGAGCTC+AGG 0.484061 3:+77295085 MsG0380015964.01.T01:CDS
AACAGCAGGCACACATCTGC+AGG 0.485882 3:-77295946 None:intergenic
TTACACTTCAGATTAGGAAC+GGG 0.486329 3:-77297433 None:intergenic
GCTCCTAATTTGCACCCTGA+TGG 0.489340 3:+77297761 MsG0380015965.01.T01:three_prime_UTR
TTTCATATTCAGGTTTACCT+TGG 0.492220 3:+77295619 MsG0380015965.01.T01:intron
ATTAGGTAGAGCATCGCAAT+AGG 0.495027 3:+77295193 MsG0380015964.01.T01:CDS
TCATTGGCACAGAATAATAC+GGG 0.499919 3:+77295128 MsG0380015964.01.T01:CDS
CAGGCTTGTCCAGCAGCGGA+TGG 0.501726 3:+77295077 MsG0380015964.01.T01:intron
TTCAGCTCTTGCATTACTGC+AGG 0.502207 3:+77293806 MsG0380015964.01.T01:CDS
ATGTGCATTTGAGCTTCTTG+TGG 0.502512 3:-77290684 None:intergenic
CGTTCCTAATCTGAAGTGTA+AGG 0.503215 3:+77297435 MsG0380015965.01.T01:three_prime_UTR
AATTTAGGGTCATCAACCTT+CGG 0.508295 3:-77292566 None:intergenic
CTAGCCTTCTACTGATTCCA+TGG 0.508803 3:+77295659 MsG0380015965.01.T01:three_prime_UTR
CAATAGAACTGTTGCCCACA+AGG 0.511066 3:-77292692 None:intergenic
CCTCACTTTGTCAATTTCCA+AGG 0.515536 3:-77295636 None:intergenic
TGTCTACTTGTACCATCAAA+TGG 0.515634 3:-77295164 None:intergenic
ATTGTAATGAATATGCATGT+TGG 0.518264 3:+77290318 MsG0380015964.01.T01:intron
CCTTGGAAATTGACAAAGTG+AGG 0.520920 3:+77295636 MsG0380015965.01.T01:three_prime_UTR
AAAGTGATTGCTGAGGTACT+TGG 0.529846 3:+77290814 MsG0380015964.01.T01:intron
TCCTGCAATGGATAGAGCAT+TGG 0.533077 3:+77292457 MsG0380015964.01.T01:CDS
TTACAAGTTGTACGAGGAGC+TGG 0.536394 3:+77297615 MsG0380015965.01.T01:three_prime_UTR
AATGTACTAGCTCTGTCTGC+TGG 0.544622 3:-77291080 None:intergenic
AGACAGAGCTAGTACATTCG+AGG 0.546698 3:+77291085 MsG0380015964.01.T01:CDS
ACCTTCGGTGGATGCCTCCA+AGG 0.546896 3:-77292551 None:intergenic
AATTGATGCCAAGGAACAGC+AGG 0.547099 3:-77295960 None:intergenic
AGTCCAAATTTGTGCTTCAA+CGG 0.548182 3:+77297295 MsG0380015965.01.T01:three_prime_UTR
TGCAGTAATGCAAGAGCTGA+AGG 0.549471 3:-77293804 None:intergenic
ATTTGTGTATAATCTGCAAA+CGG 0.555485 3:-77297812 None:intergenic
TTTGCAATTGATGTACGCAA+TGG 0.556083 3:+77292494 MsG0380015964.01.T01:CDS
TTGGCTGGCAGACCTTTGGG+TGG 0.572900 3:+77290658 MsG0380015964.01.T01:intron
ATATTGACAACCAGATAGAA+TGG 0.574311 3:+77297592 MsG0380015965.01.T01:three_prime_UTR
AATTGATGTACGCAATGGAA+AGG 0.575296 3:+77292499 MsG0380015964.01.T01:CDS
ATCCGTCGATCTGAATTGCT+GGG 0.577242 3:-77297401 None:intergenic
CTTACACTTCAGATTAGGAA+CGG 0.579067 3:-77297434 None:intergenic
GTTGCAGGCTTGTCCAGCAG+CGG 0.581187 3:+77295073 MsG0380015964.01.T01:intron
TAAAGCTCAAATAGATGTCG+AGG 0.581825 3:-77290844 None:intergenic
TTCTGTCGTGAATCCTGCAA+TGG 0.583549 3:+77292445 MsG0380015964.01.T01:CDS
TTCTGAATGACTAAAATAGT+CGG 0.584365 3:-77290712 None:intergenic
TGATGACCCTAAATTGCGCA+TGG 0.597304 3:+77292574 MsG0380015964.01.T01:CDS
ACATTTGTGAATTGATGCCA+AGG 0.605777 3:-77295969 None:intergenic
TTCTTGTGGAGTCCACCCAA+AGG 0.607668 3:-77290670 None:intergenic
TCTGATCAATGCAGAATTTG+GGG 0.611267 3:+77292634 MsG0380015964.01.T01:CDS
TTAGGGTCATCAACCTTCGG+TGG 0.614297 3:-77292563 None:intergenic
AAGTGATTGCTGAGGTACTT+GGG 0.614933 3:+77290815 MsG0380015964.01.T01:intron
ACCTTGGAGGCATCCACCGA+AGG 0.617977 3:+77292550 MsG0380015964.01.T01:CDS
TGTAATGAATATGCATGTTG+GGG 0.618038 3:+77290320 MsG0380015964.01.T01:intron
CTTCTACTGATTCCATGGAA+AGG 0.622442 3:+77295664 MsG0380015965.01.T01:three_prime_UTR
GCAAAGTTTACAATCCATCA+GGG 0.624732 3:-77297775 None:intergenic
GACCCAGCAATTCAGATCGA+CGG 0.644396 3:+77297399 MsG0380015965.01.T01:three_prime_UTR
CAATGAAATCGAATCAACTG+AGG 0.651512 3:-77295111 None:intergenic
AATGAAATCGAATCAACTGA+GGG 0.655985 3:-77295110 None:intergenic
CATTGGCACAGAATAATACG+GGG 0.662296 3:+77295129 MsG0380015964.01.T01:CDS
AAAGCTCAAATAGATGTCGA+GGG 0.670088 3:-77290843 None:intergenic
ACAAGAAGCTCAAATGCACA+TGG 0.678453 3:+77290686 MsG0380015964.01.T01:CDS
TTTCGACTTCAAAAGCACTG+TGG 0.727045 3:-77297368 None:intergenic
GAATGGTTACAAGTTGTACG+AGG 0.734073 3:+77297609 MsG0380015965.01.T01:three_prime_UTR
ATTGGCACAGAATAATACGG+GGG 0.734917 3:+77295130 MsG0380015964.01.T01:CDS
TCAGTGGAAAGTGATTGCTG+AGG 0.736296 3:+77290807 MsG0380015964.01.T01:intron
GTAATGAATATGCATGTTGG+GGG 0.766596 3:+77290321 MsG0380015964.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAATTAATATT+TGG + Chr3:77297031-77297050 MsG0380015965.01.T01:intron 0.0%
!! ACAAGTATAATTATAAAATA+TGG + Chr3:77291253-77291272 MsG0380015964.01.T01:intron 10.0%
!! ATATTTGCATATTAAAAAAA+TGG - Chr3:77296293-77296312 None:intergenic 10.0%
!!! ATGTTTTTATTCTTATTTTT+AGG + Chr3:77296922-77296941 MsG0380015965.01.T01:intron 10.0%
!!! ATTGAATTTTATTTTTTATC+GGG - Chr3:77291536-77291555 None:intergenic 10.0%
!!! CATTGAATTTTATTTTTTAT+CGG - Chr3:77291537-77291556 None:intergenic 10.0%
!!! TTAATGATTTTTTTTTTGAA+TGG + Chr3:77295481-77295500 MsG0380015965.01.T01:intron 10.0%
!! AAATAAATAAATCTTACTTG+TGG - Chr3:77290894-77290913 None:intergenic 15.0%
!! AAGATGAAATGAATTTAAAA+TGG + Chr3:77295836-77295855 MsG0380015965.01.T01:intron 15.0%
!! ACTGCAAAAAAAAAAAAAAA+AGG + Chr3:77294348-77294367 MsG0380015964.01.T01:intron 15.0%
!! ATCAAAATTAAAAGTTGAAA+AGG - Chr3:77294765-77294784 None:intergenic 15.0%
!! CAAAAAAAAAATCATTAACA+AGG - Chr3:77295479-77295498 None:intergenic 15.0%
!! GTATAATTATAAAATATGGT+TGG + Chr3:77291257-77291276 MsG0380015964.01.T01:intron 15.0%
!! TCAAAATTAAAAGTTGAAAA+GGG - Chr3:77294764-77294783 None:intergenic 15.0%
!! TTTAATATTTAGTAGTACAA+AGG + Chr3:77294393-77294412 MsG0380015964.01.T01:intron 15.0%
!!! CAAGTAAGATTTATTTATTT+TGG + Chr3:77290894-77290913 MsG0380015964.01.T01:intron 15.0%
!!! CAATAGAAATAAATTTTCTA+AGG - Chr3:77297185-77297204 None:intergenic 15.0%
!!! CATTTTATATACTCAAATTT+AGG - Chr3:77291594-77291613 None:intergenic 15.0%
!!! TACTTTAACATTATTTTTTC+TGG + Chr3:77295228-77295247 MsG0380015965.01.T01:intron 15.0%
!!! TTTTTTATTATTTTGCTAAC+TGG - Chr3:77291333-77291352 None:intergenic 15.0%
!! AAAATGATTCTCTATATTAG+TGG + Chr3:77292192-77292211 MsG0380015964.01.T01:intron 20.0%
!! AAAATTAAAAGTTGAAAAGG+GGG - Chr3:77294762-77294781 None:intergenic 20.0%
!! AAAATTGAAATTTGCAAAAG+GGG + Chr3:77294923-77294942 MsG0380015964.01.T01:intron 20.0%
!! AAATTAGCAAATTTCATTAC+TGG + Chr3:77294035-77294054 MsG0380015964.01.T01:intron 20.0%
!! ACATTTCATTTATCTTTCTT+TGG - Chr3:77296882-77296901 None:intergenic 20.0%
!! ACTGATATTATATTTCTTAC+TGG + Chr3:77291030-77291049 MsG0380015964.01.T01:intron 20.0%
!! ACTTAATGTATTTAGTAACT+AGG + Chr3:77293892-77293911 MsG0380015964.01.T01:intron 20.0%
!! AGATAACTGTTATAAAACTT+AGG - Chr3:77295040-77295059 None:intergenic 20.0%
!! ATTCAATGCACAAAAAAAAT+CGG - Chr3:77297323-77297342 None:intergenic 20.0%
!! CAAAATTAAAAGTTGAAAAG+GGG - Chr3:77294763-77294782 None:intergenic 20.0%
!! CAAAATTGAAATTTGCAAAA+GGG + Chr3:77294922-77294941 MsG0380015964.01.T01:intron 20.0%
!! CTTAAACTCAGAAATAAAAA+CGG - Chr3:77295559-77295578 None:intergenic 20.0%
!! GAATAACAAAAAAGTGAAAA+AGG - Chr3:77292929-77292948 None:intergenic 20.0%
!! GATAAAATGTTAATTGTCTT+AGG + Chr3:77295313-77295332 MsG0380015965.01.T01:intron 20.0%
!! TAATTATACTTGTACAATAC+CGG - Chr3:77291246-77291265 None:intergenic 20.0%
!! TAATTCAAAGGATAAAAACA+GGG + Chr3:77292244-77292263 MsG0380015964.01.T01:intron 20.0%
!! TAGTTACTAAATACATTAAG+TGG - Chr3:77293893-77293912 None:intergenic 20.0%
!! TATAGTTTGAAAACGATAAT+AGG - Chr3:77291179-77291198 None:intergenic 20.0%
!! TATTTATAGGGCAAATAATA+TGG + Chr3:77294846-77294865 MsG0380015964.01.T01:intron 20.0%
!! TCAAAATTGAAATTTGCAAA+AGG + Chr3:77294921-77294940 MsG0380015964.01.T01:intron 20.0%
!! TGAGTATATAAAATGTCAAT+AGG + Chr3:77291599-77291618 MsG0380015964.01.T01:intron 20.0%
!! TTAAACTCAGAAATAAAAAC+GGG - Chr3:77295558-77295577 None:intergenic 20.0%
!! TTACATTACTTTAACTATTC+TGG + Chr3:77294418-77294437 MsG0380015964.01.T01:intron 20.0%
!! TTCATTTCATCTTGAATATA+AGG - Chr3:77295829-77295848 None:intergenic 20.0%
!! TTGAGTATATATATGTAGTA+CGG - Chr3:77290440-77290459 None:intergenic 20.0%
!!! AAAATTTTGAATAGAATCTC+TGG + Chr3:77293470-77293489 MsG0380015964.01.T01:intron 20.0%
!!! AAAATTTTTGCATTATCGTT+GGG + Chr3:77290985-77291004 MsG0380015964.01.T01:intron 20.0%
!!! AAACCCTAATTTTTTAGAAA+GGG + Chr3:77296807-77296826 MsG0380015965.01.T01:intron 20.0%
!!! AATGTGGTTTTTTTTAATAG+GGG - Chr3:77294722-77294741 None:intergenic 20.0%
!!! AGTTTATAATTTTTCCTTGT+GGG + Chr3:77292678-77292697 MsG0380015964.01.T01:CDS 20.0%
!!! ATACCATTTTCATTTGTTAT+TGG + Chr3:77290605-77290624 MsG0380015964.01.T01:intron 20.0%
!!! ATCTTTGGTTAAATTGTTTT+AGG + Chr3:77295788-77295807 MsG0380015965.01.T01:intron 20.0%
!!! ATTTGATAGTGCAAAATTAT+AGG + Chr3:77292789-77292808 MsG0380015964.01.T01:intron 20.0%
!!! CAAATCTCCTTTATTTATTA+CGG + Chr3:77291764-77291783 MsG0380015964.01.T01:intron 20.0%
!!! CTTTTCTTAAAATGTTTTTC+TGG + Chr3:77294004-77294023 MsG0380015964.01.T01:intron 20.0%
!!! GAATAAATAAGATACCATTT+TGG + Chr3:77297711-77297730 MsG0380015965.01.T01:three_prime_UTR 20.0%
!!! GAATAAATAGAAGTACTTTA+TGG + Chr3:77292064-77292083 MsG0380015964.01.T01:intron 20.0%
!!! GAATGTGGTTTTTTTTAATA+GGG - Chr3:77294723-77294742 None:intergenic 20.0%
!!! GTGGTTTTTTTTTTAATAGA+GGG + Chr3:77294967-77294986 MsG0380015964.01.T01:intron 20.0%
!!! TACCATTTTCATTTGTTATT+GGG + Chr3:77290606-77290625 MsG0380015964.01.T01:intron 20.0%
!!! TGTGGTTTTTTTTTTAATAG+AGG + Chr3:77294966-77294985 MsG0380015964.01.T01:intron 20.0%
!!! TGTTTACATACCATATTTTT+CGG - Chr3:77292739-77292758 None:intergenic 20.0%
!!! TTTAACTTTACAATCTTCAA+CGG - Chr3:77292115-77292134 None:intergenic 20.0%
! AAACATTAAGTTCTCCATAT+CGG - Chr3:77292029-77292048 None:intergenic 25.0%
! AAAGAAGATGGATAAAGAAA+GGG - Chr3:77296714-77296733 None:intergenic 25.0%
! AAATTAAAAGTTGAAAAGGG+GGG - Chr3:77294761-77294780 None:intergenic 25.0%
! AACCCAATAACAAATGAAAA+TGG - Chr3:77290611-77290630 None:intergenic 25.0%
! AATGATAGCTTCAGTAAATT+TGG + Chr3:77294283-77294302 MsG0380015964.01.T01:intron 25.0%
! AATTATACTTGTACAATACC+GGG - Chr3:77291245-77291264 None:intergenic 25.0%
! AATTCAAACTGGAATTACAA+GGG - Chr3:77293372-77293391 None:intergenic 25.0%
! AGATTCAAATTTCTTAGCTA+TGG + Chr3:77295596-77295615 MsG0380015965.01.T01:intron 25.0%
! AGGAATACCGTAATAAATAA+AGG - Chr3:77291774-77291793 None:intergenic 25.0%
! ATATGGTTGGATCATAATAT+TGG + Chr3:77291270-77291289 MsG0380015964.01.T01:intron 25.0%
! ATCACTAATAGGTTAAAGAA+AGG - Chr3:77294499-77294518 None:intergenic 25.0%
! ATTAATATTTGGATACTCTC+CGG + Chr3:77297042-77297061 MsG0380015965.01.T01:intron 25.0%
! CAGTTATCTAAGCTAATATT+TGG + Chr3:77295051-77295070 MsG0380015964.01.T01:intron 25.0%
! CTAATTCAAAGGATAAAAAC+AGG + Chr3:77292243-77292262 MsG0380015964.01.T01:intron 25.0%
! CTTTGAATTAGCTAATTCAT+GGG - Chr3:77292234-77292253 None:intergenic 25.0%
! GTATATAAAATGTCAATAGG+TGG + Chr3:77291602-77291621 MsG0380015964.01.T01:intron 25.0%
! GTGTGTAAGTATATTAGATA+CGG + Chr3:77295686-77295705 MsG0380015965.01.T01:intron 25.0%
! GTTATCATACTAACATGTAA+TGG - Chr3:77290480-77290499 None:intergenic 25.0%
! GTTATGTAAAGGTTATATGT+GGG - Chr3:77291514-77291533 None:intergenic 25.0%
! GTTTCAATAACTATCAAACT+TGG + Chr3:77295377-77295396 MsG0380015965.01.T01:intron 25.0%
! TAAAAAAAGTAGAAATTGCG+AGG - Chr3:77290769-77290788 None:intergenic 25.0%
! TAACAAAAAAGTGAAAAAGG+AGG - Chr3:77292926-77292945 None:intergenic 25.0%
! TACATGTTAGTATGATAACA+AGG + Chr3:77290481-77290500 MsG0380015964.01.T01:intron 25.0%
! TATTTAGTAACTAGGTCATT+TGG + Chr3:77293900-77293919 MsG0380015964.01.T01:intron 25.0%
! TTAATTCTAACATCATCAAG+CGG + Chr3:77296649-77296668 MsG0380015965.01.T01:intron 25.0%
! TTATAAAAGTAGCAGAAAAC+AGG - Chr3:77293329-77293348 None:intergenic 25.0%
! TTCAATGCACAAAAAAAATC+GGG - Chr3:77297322-77297341 None:intergenic 25.0%
! TTCCTTATCTTAAATGTACA+AGG + Chr3:77296004-77296023 MsG0380015965.01.T01:intron 25.0%
! TTCTGAATGACTAAAATAGT+CGG - Chr3:77290715-77290734 None:intergenic 25.0%
! TTGTAGTATTTCTCTCTTTA+TGG + Chr3:77293606-77293625 MsG0380015964.01.T01:intron 25.0%
! TTTAACCTATTAGTGATCTA+TGG + Chr3:77294502-77294521 MsG0380015964.01.T01:intron 25.0%
!! AAATTTTTGCATTATCGTTG+GGG + Chr3:77290986-77291005 MsG0380015964.01.T01:intron 25.0%
!! AACCTTGTACATTTAAGATA+AGG - Chr3:77296009-77296028 None:intergenic 25.0%
!! ATATAAGAAATCACCACTTT+TGG + Chr3:77294095-77294114 MsG0380015964.01.T01:intron 25.0%
!! CAAAATTTTTGCATTATCGT+TGG + Chr3:77290984-77291003 MsG0380015964.01.T01:intron 25.0%
!! CAGTTTATAATTTTTCCTTG+TGG + Chr3:77292677-77292696 MsG0380015964.01.T01:CDS 25.0%
!! CCAAAAAAGTATAATTGTCA+AGG - Chr3:77290554-77290573 None:intergenic 25.0%
!! CGTTTTCAAACTATAATTGA+GGG + Chr3:77291184-77291203 MsG0380015964.01.T01:intron 25.0%
!! GTAATTTTTCACAACCTTTA+GGG + Chr3:77292321-77292340 MsG0380015964.01.T01:intron 25.0%
!! GTTAATCATTCAGCAATTTT+TGG + Chr3:77290639-77290658 MsG0380015964.01.T01:intron 25.0%
!! GTTTACATACCATATTTTTC+GGG - Chr3:77292738-77292757 None:intergenic 25.0%
!! TCGTTTTCAAACTATAATTG+AGG + Chr3:77291183-77291202 MsG0380015964.01.T01:intron 25.0%
!! TCTATCAATACTTGTGTTTT+TGG + Chr3:77293398-77293417 MsG0380015964.01.T01:intron 25.0%
!! TCTGGAATAAACATGATAAA+AGG + Chr3:77293090-77293109 MsG0380015964.01.T01:intron 25.0%
!! TGTAATTTTTCACAACCTTT+AGG + Chr3:77292320-77292339 MsG0380015964.01.T01:intron 25.0%
!! TTCCCCTTTCTAAAAAATTA+GGG - Chr3:77296813-77296832 None:intergenic 25.0%
!! TTTTATCATGTTTATTCCAG+AGG - Chr3:77293091-77293110 None:intergenic 25.0%
!!! AACCCTAATTTTTTAGAAAG+GGG + Chr3:77296808-77296827 MsG0380015965.01.T01:intron 25.0%
!!! ATGTGGTTTTTTTTAATAGG+GGG - Chr3:77294721-77294740 None:intergenic 25.0%
!!! ATTGACATGTTGCATTTTTT+GGG - Chr3:77291308-77291327 None:intergenic 25.0%
!!! ATTTTAGTCATTCAGAAGTA+TGG + Chr3:77290718-77290737 MsG0380015964.01.T01:intron 25.0%
!!! CCTTGACAATTATACTTTTT+TGG + Chr3:77290551-77290570 MsG0380015964.01.T01:intron 25.0%
!!! GAAACCCTAATTTTTTAGAA+AGG + Chr3:77296806-77296825 MsG0380015965.01.T01:intron 25.0%
!!! GGAATGTGGTTTTTTTTAAT+AGG - Chr3:77294724-77294743 None:intergenic 25.0%
!!! GTTATATGTGGGTTAAATTT+TGG - Chr3:77291503-77291522 None:intergenic 25.0%
!!! TATTGACATGTTGCATTTTT+TGG - Chr3:77291309-77291328 None:intergenic 25.0%
!!! TTGAATATTTTTACGATACG+AGG + Chr3:77297337-77297356 MsG0380015965.01.T01:three_prime_UTR 25.0%
!!! TTTCATTTACTTGTTATGCT+AGG + Chr3:77291408-77291427 MsG0380015964.01.T01:intron 25.0%
!!! TTTCCTAAAAGAGTACTAAA+CGG - Chr3:77290411-77290430 None:intergenic 25.0%
!!! TTTTGAAGTCGAAAATACAT+GGG + Chr3:77297377-77297396 MsG0380015965.01.T01:three_prime_UTR 25.0%
!!! TTTTTTATCGGGTTATGTAA+AGG - Chr3:77291525-77291544 None:intergenic 25.0%
AACAATGAAAACTCAAAAGC+AGG - Chr3:77292823-77292842 None:intergenic 30.0%
AACATTAAGTTCTCCATATC+GGG - Chr3:77292028-77292047 None:intergenic 30.0%
AATAGATTGTACATGTGGTA+GGG - Chr3:77292974-77292993 None:intergenic 30.0%
AATATTGACGATTAAGAGAG+TGG + Chr3:77296364-77296383 MsG0380015965.01.T01:intron 30.0%
AATCCAAGCACAACTTAAAA+TGG - Chr3:77293698-77293717 None:intergenic 30.0%
AATGAAATCGAATCAACTGA+GGG - Chr3:77295113-77295132 None:intergenic 30.0%
AATGCTACACTATATCCAAA+AGG + Chr3:77296446-77296465 MsG0380015965.01.T01:intron 30.0%
AATTAAAAGTTGAAAAGGGG+GGG - Chr3:77294760-77294779 None:intergenic 30.0%
ACAATGAAAACTCAAAAGCA+GGG - Chr3:77292822-77292841 None:intergenic 30.0%
ACTAAATACATTAAGTGGCA+AGG - Chr3:77293888-77293907 None:intergenic 30.0%
AGAAATTTGATGTGTGCTTA+TGG - Chr3:77292140-77292159 None:intergenic 30.0%
AGAACAATCTATAAGTTGCA+GGG - Chr3:77295888-77295907 None:intergenic 30.0%
AGCAAATATTGTTGAGTTCT+TGG + Chr3:77296051-77296070 MsG0380015965.01.T01:intron 30.0%
ATAAAGGAGATTTGCAACTT+TGG - Chr3:77291758-77291777 None:intergenic 30.0%
ATATTGACAACCAGATAGAA+TGG + Chr3:77297592-77297611 MsG0380015965.01.T01:three_prime_UTR 30.0%
ATTAACAAACACAAGAAACC+AGG + Chr3:77296313-77296332 MsG0380015965.01.T01:intron 30.0%
ATTATACTTGTACAATACCG+GGG - Chr3:77291244-77291263 None:intergenic 30.0%
ATTATCATTACCTTCATGTC+AGG + Chr3:77293742-77293761 MsG0380015964.01.T01:intron 30.0%
ATTTGCAACTTTGGACAATA+GGG - Chr3:77291749-77291768 None:intergenic 30.0%
CAAGACAGTAAAAACAAGTT+GGG + Chr3:77294802-77294821 MsG0380015964.01.T01:intron 30.0%
CACTTTCCACTGAAATTTAA+GGG - Chr3:77290800-77290819 None:intergenic 30.0%
CAGTGAAAAATATCTTGATG+TGG + Chr3:77297569-77297588 MsG0380015965.01.T01:three_prime_UTR 30.0%
CCATGAATTAGCTAATTCAA+AGG + Chr3:77292232-77292251 MsG0380015964.01.T01:intron 30.0%
CCTTTGAATTAGCTAATTCA+TGG - Chr3:77292235-77292254 None:intergenic 30.0%
CGAAAAAACAATATCTAAGC+TGG - Chr3:77297641-77297660 None:intergenic 30.0%
CTAAATACATTAAGTGGCAA+GGG - Chr3:77293887-77293906 None:intergenic 30.0%
CTATCATTTGACTAAACCTA+AGG - Chr3:77294271-77294290 None:intergenic 30.0%
CTCACGAATCATTGTAATTT+CGG + Chr3:77297502-77297521 MsG0380015965.01.T01:three_prime_UTR 30.0%
GAAAGAAGATGGATAAAGAA+AGG - Chr3:77296715-77296734 None:intergenic 30.0%
GAATTCAAACTGGAATTACA+AGG - Chr3:77293373-77293392 None:intergenic 30.0%
GAATTTAAAGGAAGTCTGTT+AGG + Chr3:77295415-77295434 MsG0380015965.01.T01:intron 30.0%
GAGCAAGTTGCATATTTATA+GGG + Chr3:77294834-77294853 MsG0380015964.01.T01:intron 30.0%
GATAAAACACAAACAACACA+TGG - Chr3:77295751-77295770 None:intergenic 30.0%
GATGTCTACTTTAATGAAGT+AGG + Chr3:77296078-77296097 MsG0380015965.01.T01:intron 30.0%
GGTTATGTAAAGGTTATATG+TGG - Chr3:77291515-77291534 None:intergenic 30.0%
TAAGTTAGCAAAGTTGTCTT+TGG - Chr3:77296632-77296651 None:intergenic 30.0%
TAATAGATTGTACATGTGGT+AGG - Chr3:77292975-77292994 None:intergenic 30.0%
TCAAACATCAAGATACGATA+CGG + Chr3:77296215-77296234 MsG0380015965.01.T01:intron 30.0%
TCAAGACAGTAAAAACAAGT+TGG + Chr3:77294801-77294820 MsG0380015964.01.T01:intron 30.0%
TCACTTTCCACTGAAATTTA+AGG - Chr3:77290801-77290820 None:intergenic 30.0%
TCTCACTTAACGGTATTATT+GGG - Chr3:77293570-77293589 None:intergenic 30.0%
TGAGCAAGTTGCATATTTAT+AGG + Chr3:77294833-77294852 MsG0380015964.01.T01:intron 30.0%
TGTAATTTCGGCTTCAAAAT+AGG + Chr3:77297514-77297533 MsG0380015965.01.T01:three_prime_UTR 30.0%
TGTGATGAGTAAAGAAATGT+TGG - Chr3:77293008-77293027 None:intergenic 30.0%
TTAGCTATGGTTTCATATTC+AGG + Chr3:77295609-77295628 MsG0380015965.01.T01:intron 30.0%
TTCACTAAAAAGAACACCTA+CGG - Chr3:77293148-77293167 None:intergenic 30.0%
TTCATTGGCACAGAATAATA+CGG + Chr3:77295127-77295146 MsG0380015964.01.T01:CDS 30.0%
TTCCATATACAGTGTATGAA+GGG - Chr3:77294470-77294489 None:intergenic 30.0%
TTCTTTCCTTGACAAGAAAA+TGG + Chr3:77296728-77296747 MsG0380015965.01.T01:intron 30.0%
TTTCCATATACAGTGTATGA+AGG - Chr3:77294471-77294490 None:intergenic 30.0%
! AAGATACCATTTTGGATCTT+GGG + Chr3:77297719-77297738 MsG0380015965.01.T01:three_prime_UTR 30.0%
! ATCACTAACAATGTTCCTTT+TGG - Chr3:77296464-77296483 None:intergenic 30.0%
! ATTTTGCACTATCAAATCCA+TGG - Chr3:77292786-77292805 None:intergenic 30.0%
! CTTCCCCTTTCTAAAAAATT+AGG - Chr3:77296814-77296833 None:intergenic 30.0%
! GAAGATGTGTTCAATTCTTT+TGG + Chr3:77292343-77292362 MsG0380015964.01.T01:intron 30.0%
! GTAGAAAGTGTGGAATTTAA+AGG + Chr3:77295403-77295422 MsG0380015965.01.T01:intron 30.0%
! TAAGATACCATTTTGGATCT+TGG + Chr3:77297718-77297737 MsG0380015965.01.T01:three_prime_UTR 30.0%
! TCAGATGACAAATTACGTTT+TGG + Chr3:77292524-77292543 MsG0380015964.01.T01:CDS 30.0%
! TGAGTTTTCATTGTTGAAGA+AGG + Chr3:77292828-77292847 MsG0380015964.01.T01:intron 30.0%
! TGATTTGGGTGAAAATTGAA+TGG - Chr3:77291631-77291650 None:intergenic 30.0%
! TGCAGTATGGACATATTTTT+GGG + Chr3:77291825-77291844 MsG0380015964.01.T01:intron 30.0%
! TTTCATATTCAGGTTTACCT+TGG + Chr3:77295619-77295638 MsG0380015965.01.T01:intron 30.0%
!! ATACGAGTTTTGACATGATT+TGG - Chr3:77291646-77291665 None:intergenic 30.0%
!! TACAGTTTGTTGTAGATCTT+TGG + Chr3:77295773-77295792 MsG0380015965.01.T01:intron 30.0%
!! TACGAGTTTTGACATGATTT+GGG - Chr3:77291645-77291664 None:intergenic 30.0%
!! TCAACAATATTTGCTATGCA+CGG - Chr3:77296046-77296065 None:intergenic 30.0%
!! TCGCTTTTGTTTATTATGGT+TGG + Chr3:77294152-77294171 MsG0380015964.01.T01:intron 30.0%
!! TTAAAATGTTTTTCTGGTGC+TGG + Chr3:77294010-77294029 MsG0380015964.01.T01:intron 30.0%
!! TTCAACTTTTTCTTCCAAAG+TGG - Chr3:77296789-77296808 None:intergenic 30.0%
!!! CTTGTTTTTACTGTCTTGAA+TGG - Chr3:77294800-77294819 None:intergenic 30.0%
!!! CTTTTGAAGTCGAAAATACA+TGG + Chr3:77297376-77297395 MsG0380015965.01.T01:three_prime_UTR 30.0%
!!! TCTGTCGCTTTTGTTTATTA+TGG + Chr3:77294148-77294167 MsG0380015964.01.T01:intron 30.0%
!!! TGGAGAGCATTATAAGTTTT+AGG + Chr3:77294647-77294666 MsG0380015964.01.T01:intron 30.0%
!!! TGGATATAGTGCTTCTTTTT+TGG - Chr3:77296500-77296519 None:intergenic 30.0%
AAAGCTCAAATAGATGTCGA+GGG - Chr3:77290846-77290865 None:intergenic 35.0%
AAAGTTGTCTTTGGATGAAC+CGG - Chr3:77296623-77296642 None:intergenic 35.0%
AACTTGGTATGTAGAAAGTG+TGG + Chr3:77295393-77295412 MsG0380015965.01.T01:intron 35.0%
AATGGGACATTGAATTTGTG+AGG + Chr3:77293221-77293240 MsG0380015964.01.T01:intron 35.0%
AATTGATGTACGCAATGGAA+AGG + Chr3:77292499-77292518 MsG0380015964.01.T01:CDS 35.0%
ACAAGTAGACAGCAAGTATT+AGG + Chr3:77295176-77295195 MsG0380015964.01.T01:CDS 35.0%
ACACTAAATAACTCAGGCTT+AGG + Chr3:77293523-77293542 MsG0380015964.01.T01:intron 35.0%
ACAGACACACATCTCAATTA+TGG - Chr3:77290582-77290601 None:intergenic 35.0%
ACATTAAGTTCTCCATATCG+GGG - Chr3:77292027-77292046 None:intergenic 35.0%
ACATTTGTGAATTGATGCCA+AGG - Chr3:77295972-77295991 None:intergenic 35.0%
ACTTAGGCTTAAACACACTT+TGG - Chr3:77295024-77295043 None:intergenic 35.0%
ACTTCCTTACACTTCAGATT+AGG - Chr3:77297442-77297461 None:intergenic 35.0%
ACTTCTGCATGTGTGATTAA+TGG + Chr3:77292393-77292412 MsG0380015964.01.T01:intron 35.0%
AGCAAAGTTTACAATCCATC+AGG - Chr3:77297779-77297798 None:intergenic 35.0%
AGCGTAATAGATTGTACATG+TGG - Chr3:77292979-77292998 None:intergenic 35.0%
AGTCCAAATTTGTGCTTCAA+CGG + Chr3:77297295-77297314 MsG0380015965.01.T01:three_prime_UTR 35.0%
ATAGATGCTGGAATTCAAAC+TGG - Chr3:77293383-77293402 None:intergenic 35.0%
ATAGGGCAAATAATATGGCT+TGG + Chr3:77294851-77294870 MsG0380015964.01.T01:intron 35.0%
ATATTAAAAGCTAGTCCCAC+TGG - Chr3:77294381-77294400 None:intergenic 35.0%
ATCGCAACTAGTGTAAAGTT+AGG - Chr3:77294693-77294712 None:intergenic 35.0%
ATGATGGTACAAACCAAAAG+TGG - Chr3:77294111-77294130 None:intergenic 35.0%
ATGCTCAACATGACAGATAT+GGG + Chr3:77291686-77291705 MsG0380015964.01.T01:intron 35.0%
ATGGGGTTTCACCAAATAAT+GGG - Chr3:77293496-77293515 None:intergenic 35.0%
ATTAGATATTTGTAGCACCG+AGG + Chr3:77293647-77293666 MsG0380015964.01.T01:intron 35.0%
ATTGAACACATCTTCCCTAA+AGG - Chr3:77292338-77292357 None:intergenic 35.0%
CAAAAAAGTGAAAAAGGAGG+AGG - Chr3:77292923-77292942 None:intergenic 35.0%
CAACTTGTAACCATTCTATC+TGG - Chr3:77297605-77297624 None:intergenic 35.0%
CAATGAAATCGAATCAACTG+AGG - Chr3:77295114-77295133 None:intergenic 35.0%
CACAAATTCAATGTCCCATT+TGG - Chr3:77293221-77293240 None:intergenic 35.0%
CACCAAATGTCTTCAAAACT+CGG + Chr3:77292876-77292895 MsG0380015964.01.T01:intron 35.0%
CAGAACAATCTATAAGTTGC+AGG - Chr3:77295889-77295908 None:intergenic 35.0%
CAGCAACTTACTAAAAGAAG+TGG - Chr3:77291476-77291495 None:intergenic 35.0%
CCACAGATCAAATAAGAGAA+TGG - Chr3:77290516-77290535 None:intergenic 35.0%
CGAGGAACTAAAATAGTTTC+AGG - Chr3:77290751-77290770 None:intergenic 35.0%
CGGTCAATTACTGTATGAAT+TGG + Chr3:77295706-77295725 MsG0380015965.01.T01:intron 35.0%
CTAAGCTAATATTTGGTTGC+AGG + Chr3:77295058-77295077 MsG0380015964.01.T01:intron 35.0%
CTCTCACTTAACGGTATTAT+TGG - Chr3:77293571-77293590 None:intergenic 35.0%
CTCTGAATTCCTCTAGATAT+GGG - Chr3:77294573-77294592 None:intergenic 35.0%
CTCTGATCAATGCAGAATTT+GGG + Chr3:77292633-77292652 MsG0380015964.01.T01:CDS 35.0%
CTGCAACTTATAGATTGTTC+TGG + Chr3:77295887-77295906 MsG0380015965.01.T01:intron 35.0%
CTTACACTTCAGATTAGGAA+CGG - Chr3:77297437-77297456 None:intergenic 35.0%
CTTTACACTAGTTGCGATTT+AGG + Chr3:77294695-77294714 MsG0380015964.01.T01:intron 35.0%
GACAGAAATCTAAACGAAGT+TGG - Chr3:77292432-77292451 None:intergenic 35.0%
GAGTAAAGAAATGTTGGACA+GGG - Chr3:77293002-77293021 None:intergenic 35.0%
GATTTGCAACTTTGGACAAT+AGG - Chr3:77291750-77291769 None:intergenic 35.0%
GCAAAGTTTACAATCCATCA+GGG - Chr3:77297778-77297797 None:intergenic 35.0%
TAAAGCTCAAATAGATGTCG+AGG - Chr3:77290847-77290866 None:intergenic 35.0%
TAAGCCTGAGTTATTTAGTG+TGG - Chr3:77293524-77293543 None:intergenic 35.0%
TACAAATCAGCTTCCAAATC+CGG + Chr3:77296601-77296620 MsG0380015965.01.T01:intron 35.0%
TACTAGCCCTTAAATTTCAG+TGG + Chr3:77290791-77290810 MsG0380015964.01.T01:intron 35.0%
TATACTTACACACCTTTCCA+TGG - Chr3:77295679-77295698 None:intergenic 35.0%
TATGCTCAACATGACAGATA+TGG + Chr3:77291685-77291704 MsG0380015964.01.T01:intron 35.0%
TATTAAAAGCTAGTCCCACT+GGG - Chr3:77294380-77294399 None:intergenic 35.0%
TATTGGAAAACAGAAGCTAC+TGG + Chr3:77292710-77292729 MsG0380015964.01.T01:CDS 35.0%
TCAGTGTGCTTATACTAAGA+TGG + Chr3:77294627-77294646 MsG0380015964.01.T01:intron 35.0%
TCATTGGCACAGAATAATAC+GGG + Chr3:77295128-77295147 MsG0380015964.01.T01:CDS 35.0%
TCGCAACTAGTGTAAAGTTA+GGG - Chr3:77294692-77294711 None:intergenic 35.0%
TCTCTGATCAATGCAGAATT+TGG + Chr3:77292632-77292651 MsG0380015964.01.T01:CDS 35.0%
TCTGATCAATGCAGAATTTG+GGG + Chr3:77292634-77292653 MsG0380015964.01.T01:CDS 35.0%
TGAGAATAAGCAATTGTCTC+AGG + Chr3:77291916-77291935 MsG0380015964.01.T01:intron 35.0%
TGAGTAAAGAAATGTTGGAC+AGG - Chr3:77293003-77293022 None:intergenic 35.0%
TGATCCTGACTTATAATGAG+TGG - Chr3:77291451-77291470 None:intergenic 35.0%
TGCTTATCTAGCATATTTGC+AGG + Chr3:77291118-77291137 MsG0380015964.01.T01:CDS 35.0%
TGTCTACTTGTACCATCAAA+TGG - Chr3:77295167-77295186 None:intergenic 35.0%
TTACACTTCAGATTAGGAAC+GGG - Chr3:77297436-77297455 None:intergenic 35.0%
TTATTTAGTGTGGCCAACAT+GGG - Chr3:77293514-77293533 None:intergenic 35.0%
TTCTTGTCAAGGAAAGAAGA+TGG - Chr3:77296726-77296745 None:intergenic 35.0%
TTGACATGCTTTCTTGATAG+AGG + Chr3:77297234-77297253 MsG0380015965.01.T01:intron 35.0%
TTTAAAGGAAGTCTGTTAGG+TGG + Chr3:77295418-77295437 MsG0380015965.01.T01:intron 35.0%
TTTGCAATTGATGTACGCAA+TGG + Chr3:77292494-77292513 MsG0380015964.01.T01:CDS 35.0%
! AAAGAAAGCCTTATCCAACT+AGG - Chr3:77291884-77291903 None:intergenic 35.0%
! AATTTAGGGTCATCAACCTT+CGG - Chr3:77292569-77292588 None:intergenic 35.0%
! AATTTTTCCGTATCGCGTAT+CGG - Chr3:77296195-77296214 None:intergenic 35.0%
! AGGTGATGTGGATAATTTTC+AGG + Chr3:77297254-77297273 MsG0380015965.01.T01:intron 35.0%
! CACTTCTAATTTTTCTCCTC+AGG + Chr3:77291972-77291991 MsG0380015964.01.T01:intron 35.0%
! CCATTCTCTTATTTGATCTG+TGG + Chr3:77290513-77290532 MsG0380015964.01.T01:intron 35.0%
! CTGCAGTATGGACATATTTT+TGG + Chr3:77291824-77291843 MsG0380015964.01.T01:intron 35.0%
! TCTAAAGTCATAGCACAAAC+AGG - Chr3:77296127-77296146 None:intergenic 35.0%
! TGATGCTTTTATCTAACTGC+AGG + Chr3:77291054-77291073 MsG0380015964.01.T01:intron 35.0%
! TTAGATATTTGTAGCACCGA+GGG + Chr3:77293648-77293667 MsG0380015964.01.T01:intron 35.0%
! TTGAAGACATTTGGTGACTT+AGG - Chr3:77292872-77292891 None:intergenic 35.0%
!! AAAAAAAGGCTTTTTCCCAG+TGG + Chr3:77294362-77294381 MsG0380015964.01.T01:intron 35.0%
!! AAAAAAGGCTTTTTCCCAGT+GGG + Chr3:77294363-77294382 MsG0380015964.01.T01:intron 35.0%
!! AACAGTGATGATGCTCTTTT+TGG - Chr3:77296419-77296438 None:intergenic 35.0%
!! ACACAAGTATTGATAGATGC+TGG - Chr3:77293395-77293414 None:intergenic 35.0%
!! ATTTGTACCTGATGATGGAA+TGG - Chr3:77296588-77296607 None:intergenic 35.0%
!! CAAATAATATGGCTTGGTAC+TGG + Chr3:77294857-77294876 MsG0380015964.01.T01:intron 35.0%
!! CTCAGTTGATTCGATTTCAT+TGG + Chr3:77295112-77295131 MsG0380015964.01.T01:CDS 35.0%
!! GTATCGATTAACACTTGTCA+AGG - Chr3:77295289-77295308 None:intergenic 35.0%
!! TTCAGGTGTGGCTTTAATAA+GGG + Chr3:77297271-77297290 MsG0380015965.01.T01:intron 35.0%
!! TTTCAGGTGTGGCTTTAATA+AGG + Chr3:77297270-77297289 MsG0380015965.01.T01:intron 35.0%
!!! AGCACTGATGTGTTCTTTTT+TGG - Chr3:77296520-77296539 None:intergenic 35.0%
!!! ATCATTCAGCAATTTTTGGC+TGG + Chr3:77290643-77290662 MsG0380015964.01.T01:intron 35.0%
!!! ATGTGGATAATTTTCAGGTG+TGG + Chr3:77297259-77297278 MsG0380015965.01.T01:intron 35.0%
!!! CGTCATCCATTTTGAAGTAT+CGG + Chr3:77297119-77297138 MsG0380015965.01.T01:intron 35.0%
!!! CTTTTGGTTTGTACCATCAT+TGG + Chr3:77294111-77294130 MsG0380015964.01.T01:intron 35.0%
!!! GTCATCCATTTTGAAGTATC+GGG + Chr3:77297120-77297139 MsG0380015965.01.T01:intron 35.0%
!!! TCATCCATTTTGAAGTATCG+GGG + Chr3:77297121-77297140 MsG0380015965.01.T01:intron 35.0%
!!! TGACCATTTTAAGTTGTGCT+TGG + Chr3:77293692-77293711 MsG0380015964.01.T01:intron 35.0%
AAAACTCAAAAGCAGGGACA+TGG - Chr3:77292816-77292835 None:intergenic 40.0%
AAAAGCGACAGATACGTGTT+GGG - Chr3:77294140-77294159 None:intergenic 40.0%
AAAAGTGAAAAAGGAGGAGG+TGG - Chr3:77292920-77292939 None:intergenic 40.0%
AAGAACACTCGCAGAAACAT+CGG - Chr3:77297216-77297235 None:intergenic 40.0%
AATCCATCAGGGTGCAAATT+AGG - Chr3:77297767-77297786 None:intergenic 40.0%
ACAAGAAGCTCAAATGCACA+TGG + Chr3:77290686-77290705 MsG0380015964.01.T01:CDS 40.0%
ACATCTGCAGGCTGTAAAAA+AGG - Chr3:77295937-77295956 None:intergenic 40.0%
ACCTATTAGTGATCTATGGC+AGG + Chr3:77294506-77294525 MsG0380015964.01.T01:intron 40.0%
ACCTGCCATAGATCACTAAT+AGG - Chr3:77294510-77294529 None:intergenic 40.0%
ACGGTATTCCTCTCAATGAT+TGG + Chr3:77291783-77291802 MsG0380015964.01.T01:intron 40.0%
ACTAAACCTAAGGCATGTGT+CGG - Chr3:77294261-77294280 None:intergenic 40.0%
AGAAAGGGCAATCAAGAATG+TGG - Chr3:77296699-77296718 None:intergenic 40.0%
AGAATCTCTGGCCCATTATT+TGG + Chr3:77293482-77293501 MsG0380015964.01.T01:intron 40.0%
AGCTAATTCATGGGACTACA+GGG - Chr3:77292225-77292244 None:intergenic 40.0%
AGGATACTCCAATCATTGAG+AGG - Chr3:77291794-77291813 None:intergenic 40.0%
ATACAGTGTATGAAGGGTCA+TGG - Chr3:77294464-77294483 None:intergenic 40.0%
ATGCAATTGTTTGTGTGGTG+TGG + Chr3:77296834-77296853 MsG0380015965.01.T01:intron 40.0%
ATGTGCATTTGAGCTTCTTG+TGG - Chr3:77290687-77290706 None:intergenic 40.0%
ATTAGTGATCTATGGCAGGT+GGG + Chr3:77294510-77294529 MsG0380015964.01.T01:intron 40.0%
ATTGCACCCAAGATCCAAAA+TGG - Chr3:77297728-77297747 None:intergenic 40.0%
ATTGGCACAGAATAATACGG+GGG + Chr3:77295130-77295149 MsG0380015964.01.T01:CDS 40.0%
CAAACAAGTAATGCTACCCT+CGG - Chr3:77293667-77293686 None:intergenic 40.0%
CAAATGCATGCTCATATCCA+TGG + Chr3:77292766-77292785 MsG0380015964.01.T01:intron 40.0%
CACTCACAGTGAAACAGAAA+TGG - Chr3:77290375-77290394 None:intergenic 40.0%
CAGAGGAGAAAGAAGAAAAG+AGG - Chr3:77293074-77293093 None:intergenic 40.0%
CATCTTCTCTCTCTTGTAGA+GGG + Chr3:77292279-77292298 MsG0380015964.01.T01:intron 40.0%
CATGGGGTTTCACCAAATAA+TGG - Chr3:77293497-77293516 None:intergenic 40.0%
CATTGGCACAGAATAATACG+GGG + Chr3:77295129-77295148 MsG0380015964.01.T01:CDS 40.0%
CCATATCTAGAGGAATTCAG+AGG + Chr3:77294571-77294590 MsG0380015964.01.T01:CDS 40.0%
CCTCACTTTGTCAATTTCCA+AGG - Chr3:77295639-77295658 None:intergenic 40.0%
CCTCTGAATTCCTCTAGATA+TGG - Chr3:77294574-77294593 None:intergenic 40.0%
CCTTGGAAATTGACAAAGTG+AGG + Chr3:77295636-77295655 MsG0380015965.01.T01:three_prime_UTR 40.0%
CGATAATTGACCTGACATGA+AGG - Chr3:77293755-77293774 None:intergenic 40.0%
CGCAACTAGTGTAAAGTTAG+GGG - Chr3:77294691-77294710 None:intergenic 40.0%
CTAGATATGGGACGAAAGAA+GGG - Chr3:77294561-77294580 None:intergenic 40.0%
CTTTCCATGGAATCAGTAGA+AGG - Chr3:77295666-77295685 None:intergenic 40.0%
CTTTCTTGATAGAGGTGATG+TGG + Chr3:77297242-77297261 MsG0380015965.01.T01:intron 40.0%
GAAAGGGCAATCAAGAATGT+GGG - Chr3:77296698-77296717 None:intergenic 40.0%
GAAGAAAAGAGGAAATCAGC+CGG - Chr3:77293063-77293082 None:intergenic 40.0%
GAATGGTTACAAGTTGTACG+AGG + Chr3:77297609-77297628 MsG0380015965.01.T01:three_prime_UTR 40.0%
GACCCTTCATACACTGTATA+TGG + Chr3:77294465-77294484 MsG0380015964.01.T01:intron 40.0%
GCAACTAGTGTAAAGTTAGG+GGG - Chr3:77294690-77294709 None:intergenic 40.0%
GGAAGATGCAATTGTTTGTG+TGG + Chr3:77296829-77296848 MsG0380015965.01.T01:intron 40.0%
GGCATCAATTCACAAATGTG+AGG + Chr3:77295973-77295992 MsG0380015965.01.T01:intron 40.0%
GTTATTTAGTGTGGCCAACA+TGG - Chr3:77293515-77293534 None:intergenic 40.0%
TAGCTAATTCATGGGACTAC+AGG - Chr3:77292226-77292245 None:intergenic 40.0%
TATTAGTGATCTATGGCAGG+TGG + Chr3:77294509-77294528 MsG0380015964.01.T01:intron 40.0%
TATTTAGTGTGGCCAACATG+GGG - Chr3:77293513-77293532 None:intergenic 40.0%
TCAAATAGATGTCGAGGGTT+TGG - Chr3:77290841-77290860 None:intergenic 40.0%
TCGATTCAGAGAAGTAAGCT+TGG - Chr3:77293280-77293299 None:intergenic 40.0%
TCTAGATATGGGACGAAAGA+AGG - Chr3:77294562-77294581 None:intergenic 40.0%
TCTCTGACACTCTCACTTAA+CGG - Chr3:77293580-77293599 None:intergenic 40.0%
TCTTTACTCATCACAACAGC+AGG + Chr3:77293013-77293032 MsG0380015964.01.T01:intron 40.0%
TGCAAAAGGGGTGAAACTTA+GGG + Chr3:77294935-77294954 MsG0380015964.01.T01:intron 40.0%
TGCTCAACATGACAGATATG+GGG + Chr3:77291687-77291706 MsG0380015964.01.T01:intron 40.0%
TGTCAAGGACAAAGCAAACA+CGG - Chr3:77290539-77290558 None:intergenic 40.0%
TTCTTTCGTCCCATATCTAG+AGG + Chr3:77294561-77294580 MsG0380015964.01.T01:CDS 40.0%
TTGCAAAAGGGGTGAAACTT+AGG + Chr3:77294934-77294953 MsG0380015964.01.T01:intron 40.0%
TTGGCCACACTAAATAACTC+AGG + Chr3:77293517-77293536 MsG0380015964.01.T01:intron 40.0%
TTGGCCACTCATTATAAGTC+AGG + Chr3:77291444-77291463 MsG0380015964.01.T01:intron 40.0%
! AAAGCCTTATCCAACTAGGT+GGG - Chr3:77291880-77291899 None:intergenic 40.0%
! AAAGTGATTGCTGAGGTACT+TGG + Chr3:77290814-77290833 MsG0380015964.01.T01:intron 40.0%
! AAGTGATTGCTGAGGTACTT+GGG + Chr3:77290815-77290834 MsG0380015964.01.T01:intron 40.0%
! AGAACTAGCATCTTTTACCC+CGG + Chr3:77291224-77291243 MsG0380015964.01.T01:intron 40.0%
! CGTTCCTAATCTGAAGTGTA+AGG + Chr3:77297435-77297454 MsG0380015965.01.T01:three_prime_UTR 40.0%
! CTCTTTTCTTCTTTCTCCTC+TGG + Chr3:77293072-77293091 MsG0380015964.01.T01:intron 40.0%
! GCGTTTTTATCGCCATTTGA+TGG + Chr3:77295152-77295171 MsG0380015964.01.T01:CDS 40.0%
! TATTTGGTGAAACCCCATGT+TGG + Chr3:77293498-77293517 MsG0380015964.01.T01:intron 40.0%
!! AATTACGTTTTGGTGCACCT+TGG + Chr3:77292534-77292553 MsG0380015964.01.T01:CDS 40.0%
!! AGCTGATTTGTACCTGATGA+TGG - Chr3:77296593-77296612 None:intergenic 40.0%
!! ATTAGGTAGAGCATCGCAAT+AGG + Chr3:77295193-77295212 MsG0380015964.01.T01:CDS 40.0%
!! CCTAAAAGAGTACTAAACGG+CGG - Chr3:77290408-77290427 None:intergenic 40.0%
!! CTAAAAGAGTACTAAACGGC+GGG - Chr3:77290407-77290426 None:intergenic 40.0%
!! CTTCTACTGATTCCATGGAA+AGG + Chr3:77295664-77295683 MsG0380015965.01.T01:three_prime_UTR 40.0%
!! CTTTTTAGTGAAGAGCGTGT+AGG + Chr3:77293156-77293175 MsG0380015964.01.T01:intron 40.0%
!! GAAGTCTGTTAGGTGGATTT+TGG + Chr3:77295425-77295444 MsG0380015965.01.T01:intron 40.0%
!! TTTCGACTTCAAAAGCACTG+TGG - Chr3:77297371-77297390 None:intergenic 40.0%
!!! AGCCGAGTTTTGAAGACATT+TGG - Chr3:77292881-77292900 None:intergenic 40.0%
!!! TGAGGGCATCGATTGATTTT+TGG + Chr3:77291201-77291220 MsG0380015964.01.T01:intron 40.0%
AAAATGGCCGAGCAGTTCAA+CGG + Chr3:77296744-77296763 MsG0380015965.01.T01:intron 45.0%
AACACCTACGGACCACATTT+GGG - Chr3:77293136-77293155 None:intergenic 45.0%
AATCCGTCGATCTGAATTGC+TGG - Chr3:77297405-77297424 None:intergenic 45.0%
AATTCATGGGACTACAGGGT+TGG - Chr3:77292221-77292240 None:intergenic 45.0%
AATTGATGCCAAGGAACAGC+AGG - Chr3:77295963-77295982 None:intergenic 45.0%
AATTGCTAACCCCACCTAGT+TGG + Chr3:77291867-77291886 MsG0380015964.01.T01:intron 45.0%
ACACAAGTATCCGTGCGTAT+CGG + Chr3:77296976-77296995 MsG0380015965.01.T01:intron 45.0%
ACATCAAGATACGATACGGC+TGG + Chr3:77296219-77296238 MsG0380015965.01.T01:intron 45.0%
ACCCTAAATTGCGCATGGAA+TGG + Chr3:77292579-77292598 MsG0380015964.01.T01:CDS 45.0%
AGAAAACCCAGTGACCCTTT+AGG + Chr3:77293857-77293876 MsG0380015964.01.T01:intron 45.0%
AGAACACTCGCAGAAACATC+GGG - Chr3:77297215-77297234 None:intergenic 45.0%
AGACAGAGCTAGTACATTCG+AGG + Chr3:77291085-77291104 MsG0380015964.01.T01:CDS 45.0%
AGTGGCAAGGGATATCCTAA+AGG - Chr3:77293875-77293894 None:intergenic 45.0%
ATACTCTCCGGATACGTATC+GGG + Chr3:77297054-77297073 MsG0380015965.01.T01:intron 45.0%
ATCCGTCGATCTGAATTGCT+GGG - Chr3:77297404-77297423 None:intergenic 45.0%
ATGGCACATTGCATAGTGCT+CGG + Chr3:77295855-77295874 MsG0380015965.01.T01:intron 45.0%
ATGGGCAAAGCTTCAGTTGA+TGG + Chr3:77292598-77292617 MsG0380015964.01.T01:CDS 45.0%
ATGTTAATGTGCTACGAGCC+TGG - Chr3:77296334-77296353 None:intergenic 45.0%
ATTGTTTGTGTGGTGTGGTG+TGG + Chr3:77296839-77296858 MsG0380015965.01.T01:intron 45.0%
ATTTGTGAGGCAGTTCTGTG+AGG + Chr3:77293234-77293253 MsG0380015964.01.T01:intron 45.0%
CAAAAGCGACAGATACGTGT+TGG - Chr3:77294141-77294160 None:intergenic 45.0%
CAAAAGGGGTGAAACTTAGG+GGG + Chr3:77294937-77294956 MsG0380015964.01.T01:intron 45.0%
CAATAGAACTGTTGCCCACA+AGG - Chr3:77292695-77292714 None:intergenic 45.0%
CATACTGCAGTTTCAGCTGA+AGG - Chr3:77291814-77291833 None:intergenic 45.0%
CATCAAGATACGATACGGCT+GGG + Chr3:77296220-77296239 MsG0380015965.01.T01:intron 45.0%
CCATCTTCTCTCTCTTGTAG+AGG + Chr3:77292278-77292297 MsG0380015964.01.T01:intron 45.0%
CCCAGATACGAGATACGATA+CGG + Chr3:77296156-77296175 MsG0380015965.01.T01:intron 45.0%
CCCATTCCATGCGCAATTTA+GGG - Chr3:77292583-77292602 None:intergenic 45.0%
CCCTAAATTGCGCATGGAAT+GGG + Chr3:77292580-77292599 MsG0380015964.01.T01:CDS 45.0%
CCGTATCGTATCTCGTATCT+GGG - Chr3:77296159-77296178 None:intergenic 45.0%
CCTCTACAAGAGAGAGAAGA+TGG - Chr3:77292281-77292300 None:intergenic 45.0%
CGCAACTAGTGCAGAGTTAA+GGG + Chr3:77294997-77295016 MsG0380015964.01.T01:intron 45.0%
CTAAACCTAAGGCATGTGTC+GGG - Chr3:77294260-77294279 None:intergenic 45.0%
CTACTGGAGCCCGAAAAATA+TGG + Chr3:77292726-77292745 MsG0380015964.01.T01:CDS 45.0%
CTCAACATGACAGATATGGG+GGG + Chr3:77291689-77291708 MsG0380015964.01.T01:intron 45.0%
CTCCTTTCATTCACCAGAAC+CGG + Chr3:77293041-77293060 MsG0380015964.01.T01:intron 45.0%
CTGCAGGCTGTAAAAAAGGA+AGG - Chr3:77295933-77295952 None:intergenic 45.0%
CTTCAGCTGAAACTGCAGTA+TGG + Chr3:77291812-77291831 MsG0380015964.01.T01:intron 45.0%
CTTGTGGGCAACAGTTCTAT+TGG + Chr3:77292693-77292712 MsG0380015964.01.T01:CDS 45.0%
GAAGCCCCGATACTTCAAAA+TGG - Chr3:77297128-77297147 None:intergenic 45.0%
GATACTCTCCGGATACGTAT+CGG + Chr3:77297053-77297072 MsG0380015965.01.T01:intron 45.0%
GATACTTCCCGATACGTATC+CGG - Chr3:77297064-77297083 None:intergenic 45.0%
GCAAAAGGGGTGAAACTTAG+GGG + Chr3:77294936-77294955 MsG0380015964.01.T01:intron 45.0%
GCTCAACATGACAGATATGG+GGG + Chr3:77291688-77291707 MsG0380015964.01.T01:intron 45.0%
GGACCGTTGAAGCACAAATT+TGG - Chr3:77297301-77297320 None:intergenic 45.0%
GGATATCCTAAAGGGTCACT+GGG - Chr3:77293866-77293885 None:intergenic 45.0%
GTCTTTGGATGAACCGGATT+TGG - Chr3:77296617-77296636 None:intergenic 45.0%
GTGGCAAGGGATATCCTAAA+GGG - Chr3:77293874-77293893 None:intergenic 45.0%
GTGTCTCGTAAGATGGTAAG+TGG + Chr3:77294593-77294612 MsG0380015964.01.T01:intron 45.0%
TAAACCTAAGGCATGTGTCG+GGG - Chr3:77294259-77294278 None:intergenic 45.0%
TAACCCCACCTAGTTGGATA+AGG + Chr3:77291873-77291892 MsG0380015964.01.T01:intron 45.0%
TAAGCTTGGTACTCTTCCGA+AGG - Chr3:77293266-77293285 None:intergenic 45.0%
TATTCCGCAATACCCCGATA+TGG + Chr3:77292012-77292031 MsG0380015964.01.T01:intron 45.0%
TCAGTGGAAAGTGATTGCTG+AGG + Chr3:77290807-77290826 MsG0380015964.01.T01:intron 45.0%
TCCAATGCTCTATCCATTGC+AGG - Chr3:77292461-77292480 None:intergenic 45.0%
TCCATGCACACAGAGAAAAC+AGG - Chr3:77295516-77295535 None:intergenic 45.0%
TCCGTATCGTATCTCGTATC+TGG - Chr3:77296160-77296179 None:intergenic 45.0%
TCCTGCAATGGATAGAGCAT+TGG + Chr3:77292457-77292476 MsG0380015964.01.T01:CDS 45.0%
TCGCAACTAGTGCAGAGTTA+AGG + Chr3:77294996-77295015 MsG0380015964.01.T01:intron 45.0%
TGAAAAAGGAGGAGGTGGAA+GGG - Chr3:77292915-77292934 None:intergenic 45.0%
TGAAAAGGGGGGGAAACATA+GGG - Chr3:77294750-77294769 None:intergenic 45.0%
TGATGACCCTAAATTGCGCA+TGG + Chr3:77292574-77292593 MsG0380015964.01.T01:CDS 45.0%
TGCAGTAATGCAAGAGCTGA+AGG - Chr3:77293807-77293826 None:intergenic 45.0%
TTACAAGTTGTACGAGGAGC+TGG + Chr3:77297615-77297634 MsG0380015965.01.T01:three_prime_UTR 45.0%
TTAGTGATCTATGGCAGGTG+GGG + Chr3:77294511-77294530 MsG0380015964.01.T01:intron 45.0%
TTCAGCTCTTGCATTACTGC+AGG + Chr3:77293806-77293825 MsG0380015964.01.T01:CDS 45.0%
TTCTGTCGTGAATCCTGCAA+TGG + Chr3:77292445-77292464 MsG0380015964.01.T01:CDS 45.0%
TTCTGTGAGGTTTAGGCCTT+CGG + Chr3:77293247-77293266 MsG0380015964.01.T01:intron 45.0%
TTGAAAAGGGGGGGAAACAT+AGG - Chr3:77294751-77294770 None:intergenic 45.0%
! AAGCCTTATCCAACTAGGTG+GGG - Chr3:77291879-77291898 None:intergenic 45.0%
! ACCTGTTTTCTCTGTGTGCA+TGG + Chr3:77295512-77295531 MsG0380015965.01.T01:intron 45.0%
! CCGCCGTTTAGTACTCTTTT+AGG + Chr3:77290405-77290424 MsG0380015964.01.T01:intron 45.0%
! CTCTGCACTAGTTGCGATTT+TGG - Chr3:77294993-77295012 None:intergenic 45.0%
! GAAAGCCTTATCCAACTAGG+TGG - Chr3:77291881-77291900 None:intergenic 45.0%
! GAGTGAAGGGATATGATGGA+GGG + Chr3:77293188-77293207 MsG0380015964.01.T01:intron 45.0%
! GGATACGTATCGGGAAGTAT+CGG + Chr3:77297063-77297082 MsG0380015965.01.T01:intron 45.0%
!! AATGTACTAGCTCTGTCTGC+TGG - Chr3:77291083-77291102 None:intergenic 45.0%
!! ATATCGGGGTATTGCGGAAT+AGG - Chr3:77292013-77292032 None:intergenic 45.0%
!! CTAGCCTTCTACTGATTCCA+TGG + Chr3:77295659-77295678 MsG0380015965.01.T01:three_prime_UTR 45.0%
!! GATACGTATCGGGAAGTATC+GGG + Chr3:77297064-77297083 MsG0380015965.01.T01:intron 45.0%
!! TGTACCTGATGATGGAATGG+AGG - Chr3:77296585-77296604 None:intergenic 45.0%
!! TTCAGAGGTGTCTCGTAAGA+TGG + Chr3:77294586-77294605 MsG0380015964.01.T01:intron 45.0%
!! TTCTCCATATCGGGGTATTG+CGG - Chr3:77292019-77292038 None:intergenic 45.0%
!!! ATTTTTGGCTGGCAGACCTT+TGG + Chr3:77290654-77290673 MsG0380015964.01.T01:intron 45.0%
!!! TTTTTGGCTGGCAGACCTTT+GGG + Chr3:77290655-77290674 MsG0380015964.01.T01:intron 45.0%
AAACTTAGGGGGCTGGAATG+TGG + Chr3:77294948-77294967 MsG0380015964.01.T01:intron 50.0%
ACGTGTTGGGACTCCAATGA+TGG - Chr3:77294127-77294146 None:intergenic 50.0%
ATCTCGTATCTGGGCTTCAC+AGG - Chr3:77296150-77296169 None:intergenic 50.0%
ATGGAGGGAACTGGACCAAA+TGG + Chr3:77293203-77293222 MsG0380015964.01.T01:intron 50.0%
CACAAGTATCCGTGCGTATC+GGG + Chr3:77296977-77296996 MsG0380015965.01.T01:intron 50.0%
CTCTCCTCCATTCCATCATC+AGG + Chr3:77296578-77296597 MsG0380015965.01.T01:intron 50.0%
GAAAAGGGGGGGAAACATAG+GGG - Chr3:77294749-77294768 None:intergenic 50.0%
GAAACATAGGGGCTGGAATG+TGG - Chr3:77294738-77294757 None:intergenic 50.0%
GAACACCTACGGACCACATT+TGG - Chr3:77293137-77293156 None:intergenic 50.0%
GACCCAGCAATTCAGATCGA+CGG + Chr3:77297399-77297418 MsG0380015965.01.T01:three_prime_UTR 50.0%
GAGGCAGTTCTGTGAGGTTT+AGG + Chr3:77293240-77293259 MsG0380015964.01.T01:intron 50.0%
GATATGGGACGAAAGAAGGG+TGG - Chr3:77294558-77294577 None:intergenic 50.0%
GCCCATTCCATGCGCAATTT+AGG - Chr3:77292584-77292603 None:intergenic 50.0%
GCTAGGCTCAGTGATACACT+TGG + Chr3:77291425-77291444 MsG0380015964.01.T01:intron 50.0%
GGAGTGAAGGGATATGATGG+AGG + Chr3:77293187-77293206 MsG0380015964.01.T01:intron 50.0%
GGGATATCCTAAAGGGTCAC+TGG - Chr3:77293867-77293886 None:intergenic 50.0%
GTGAAAAAGGAGGAGGTGGA+AGG - Chr3:77292916-77292935 None:intergenic 50.0%
TACGGACCACATTTGGGTGA+GGG - Chr3:77293130-77293149 None:intergenic 50.0%
TGGAGGGAACTGGACCAAAT+GGG + Chr3:77293204-77293223 MsG0380015964.01.T01:intron 50.0%
TGGGGAGTGAAGGGATATGA+TGG + Chr3:77293184-77293203 MsG0380015964.01.T01:intron 50.0%
TTAGGGTCATCAACCTTCGG+TGG - Chr3:77292566-77292585 None:intergenic 50.0%
TTCTTGTGGAGTCCACCCAA+AGG - Chr3:77290673-77290692 None:intergenic 50.0%
! AAGAGCGTGTAGGAAGCATG+GGG + Chr3:77293166-77293185 MsG0380015964.01.T01:intron 50.0%
! AAGAGGAAATCAGCCGGTTC+TGG - Chr3:77293057-77293076 None:intergenic 50.0%
! AGCCGGTTCTGGTGAATGAA+AGG - Chr3:77293046-77293065 None:intergenic 50.0%
! AGGGATATGATGGAGGGAAC+TGG + Chr3:77293194-77293213 MsG0380015964.01.T01:intron 50.0%
! ATTTGGTGACTTAGGCCAGG+AGG - Chr3:77292864-77292883 None:intergenic 50.0%
! CGGGATGTATCGGGAAGTAT+CGG + Chr3:77296996-77297015 MsG0380015965.01.T01:intron 50.0%
! CGGTTCTGGTGAATGAAAGG+AGG - Chr3:77293043-77293062 None:intergenic 50.0%
! GAAGAGCGTGTAGGAAGCAT+GGG + Chr3:77293165-77293184 MsG0380015964.01.T01:intron 50.0%
! GACATTTGGTGACTTAGGCC+AGG - Chr3:77292867-77292886 None:intergenic 50.0%
! GCTCCTAATTTGCACCCTGA+TGG + Chr3:77297761-77297780 MsG0380015965.01.T01:three_prime_UTR 50.0%
! TAGGAAGCATGGGGAGTGAA+GGG + Chr3:77293175-77293194 MsG0380015964.01.T01:intron 50.0%
! TGAAGAGCGTGTAGGAAGCA+TGG + Chr3:77293164-77293183 MsG0380015964.01.T01:intron 50.0%
! TGGGGCTGCTTTATGCTCAA+CGG + Chr3:77294529-77294548 MsG0380015964.01.T01:CDS 50.0%
! TTTGGTGACTTAGGCCAGGA+GGG - Chr3:77292863-77292882 None:intergenic 50.0%
!! CTGATGATGGAATGGAGGAG+AGG - Chr3:77296580-77296599 None:intergenic 50.0%
!! GAAGGTTTTTAAGCCCCTCC+TGG + Chr3:77292846-77292865 MsG0380015964.01.T01:intron 50.0%
!! GCTCGGCCATTTTCTTGTCA+AGG - Chr3:77296737-77296756 None:intergenic 50.0%
!! TACGTTTTGGTGCACCTTGG+AGG + Chr3:77292537-77292556 MsG0380015964.01.T01:CDS 50.0%
AAAGTGGACGGCGACCACTT+TGG + Chr3:77296772-77296791 MsG0380015965.01.T01:intron 55.0%
AAAGTGGTCGCCGTCCACTT+TGG - Chr3:77296773-77296792 None:intergenic 55.0%
AACAGCAGGCACACATCTGC+AGG - Chr3:77295949-77295968 None:intergenic 55.0%
AGGAGGTGGAAGGGAATGAG+AGG - Chr3:77292906-77292925 None:intergenic 55.0%
CACATTTGGGTGAGGGTGGA+GGG - Chr3:77293123-77293142 None:intergenic 55.0%
CAGTTCAACGGTGGCCAAAG+TGG + Chr3:77296756-77296775 MsG0380015965.01.T01:intron 55.0%
CCGATACATCCCGATACGCA+CGG - Chr3:77296989-77297008 None:intergenic 55.0%
CCGTGCGTATCGGGATGTAT+CGG + Chr3:77296986-77297005 MsG0380015965.01.T01:intron 55.0%
CGGTGCAGGATACGCAGATA+CGG + Chr3:77297094-77297113 MsG0380015965.01.T01:intron 55.0%
CGTGCGTATCGGGATGTATC+GGG + Chr3:77296987-77297006 MsG0380015965.01.T01:intron 55.0%
CTACGGACCACATTTGGGTG+AGG - Chr3:77293131-77293150 None:intergenic 55.0%
CTCACCCAAATGTGGTCCGT+AGG + Chr3:77293129-77293148 MsG0380015964.01.T01:intron 55.0%
GAAACCCCGACACATGCCTT+AGG + Chr3:77294252-77294271 MsG0380015964.01.T01:intron 55.0%
GATGTGTGCCTGCTGTTCCT+TGG + Chr3:77295952-77295971 MsG0380015965.01.T01:three_prime_UTR 55.0%
TCAACGGTGGCCAAAGTGGA+CGG + Chr3:77296760-77296779 MsG0380015965.01.T01:intron 55.0%
TGTGTGGTGTGGTGTGGTGT+GGG + Chr3:77296845-77296864 MsG0380015965.01.T01:intron 55.0%
TTGGCCACCGTTGAACTGCT+CGG - Chr3:77296754-77296773 None:intergenic 55.0%
TTGTGTGGTGTGGTGTGGTG+TGG + Chr3:77296844-77296863 MsG0380015965.01.T01:intron 55.0%
! CACTGCACCGATACGCGATA+CGG + Chr3:77296185-77296204 MsG0380015965.01.T01:intron 55.0%
! GGGGCTGCTTTATGCTCAAC+GGG + Chr3:77294530-77294549 MsG0380015964.01.T01:CDS 55.0%
! GTAGGAAGCATGGGGAGTGA+AGG + Chr3:77293174-77293193 MsG0380015964.01.T01:intron 55.0%
! TTGGTGACTTAGGCCAGGAG+GGG - Chr3:77292862-77292881 None:intergenic 55.0%
!! GAGCTAGCTTTGAGCACCTG+AGG - Chr3:77291991-77292010 None:intergenic 55.0%
!! GGGAAGTATCGGGCAGGTAT+CGG + Chr3:77297074-77297093 MsG0380015965.01.T01:intron 55.0%
ACCTTCGGTGGATGCCTCCA+AGG - Chr3:77292554-77292573 None:intergenic 60.0%
AGGGGTGAAACTTAGGGGGC+TGG + Chr3:77294941-77294960 MsG0380015964.01.T01:intron 60.0%
ATGGCCGAGCAGTTCAACGG+TGG + Chr3:77296747-77296766 MsG0380015965.01.T01:intron 60.0%
CCACATTTGGGTGAGGGTGG+AGG - Chr3:77293124-77293143 None:intergenic 60.0%
CCTCCACCCTCACCCAAATG+TGG + Chr3:77293121-77293140 MsG0380015964.01.T01:intron 60.0%
GGACCACATTTGGGTGAGGG+TGG - Chr3:77293127-77293146 None:intergenic 60.0%
GTTGCAGGCTTGTCCAGCAG+CGG + Chr3:77295073-77295092 MsG0380015964.01.T01:intron 60.0%
TTGGCTGGCAGACCTTTGGG+TGG + Chr3:77290658-77290677 MsG0380015964.01.T01:intron 60.0%
!! ACCTTGGAGGCATCCACCGA+AGG + Chr3:77292550-77292569 MsG0380015964.01.T01:CDS 60.0%
!! CGTATCGGGAAGTATCGGGC+AGG + Chr3:77297068-77297087 MsG0380015965.01.T01:intron 60.0%
!! TATCGGGCAGGTATCGGTGC+AGG + Chr3:77297080-77297099 MsG0380015965.01.T01:intron 60.0%
ACCTGAGCTCCATCCGCTGC+TGG - Chr3:77295089-77295108 None:intergenic 65.0%
AGGGGGGGAAACATAGGGGC+TGG - Chr3:77294745-77294764 None:intergenic 65.0%
CAGGCTTGTCCAGCAGCGGA+TGG + Chr3:77295077-77295096 MsG0380015964.01.T01:intron 65.0%
GGGTGAGGGTGGAGGGTGAT+GGG - Chr3:77293116-77293135 None:intergenic 65.0%
TCCAGCAGCGGATGGAGCTC+AGG + Chr3:77295085-77295104 MsG0380015964.01.T01:CDS 65.0%
TGGGTGAGGGTGGAGGGTGA+TGG - Chr3:77293117-77293136 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 77290330 77297821 77290330 ID=MsG0380015965.01;Name=MsG0380015965.01
Chr3 mRNA 77290330 77297821 77290330 ID=MsG0380015965.01.T01;Parent=MsG0380015965.01;Name=MsG0380015965.01.T01;_AED=0.40;_eAED=0.46;_QI=0|0.66|0.7|1|0.55|0.4|10|637|270
Chr3 exon 77290330 77290387 77290330 ID=MsG0380015965.01.T01:exon:1368;Parent=MsG0380015965.01.T01
Chr3 exon 77290634 77290734 77290634 ID=MsG0380015965.01.T01:exon:1369;Parent=MsG0380015965.01.T01
Chr3 exon 77290811 77290896 77290811 ID=MsG0380015965.01.T01:exon:1370;Parent=MsG0380015965.01.T01
Chr3 exon 77291076 77291139 77291076 ID=MsG0380015965.01.T01:exon:1371;Parent=MsG0380015965.01.T01
Chr3 exon 77292443 77292747 77292443 ID=MsG0380015965.01.T01:exon:1372;Parent=MsG0380015965.01.T01
Chr3 exon 77293764 77293827 77293764 ID=MsG0380015965.01.T01:exon:1373;Parent=MsG0380015965.01.T01
Chr3 exon 77295080 77295214 77295080 ID=MsG0380015965.01.T01:exon:1374;Parent=MsG0380015965.01.T01
Chr3 exon 77295631 77295685 77295631 ID=MsG0380015965.01.T01:exon:1375;Parent=MsG0380015965.01.T01
Chr3 exon 77295946 77295989 77295946 ID=MsG0380015965.01.T01:exon:1376;Parent=MsG0380015965.01.T01
Chr3 exon 77297284 77297821 77297284 ID=MsG0380015965.01.T01:exon:1377;Parent=MsG0380015965.01.T01
Chr3 CDS 77290330 77290387 77290330 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 CDS 77290634 77290734 77290634 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 CDS 77290811 77290896 77290811 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 CDS 77291076 77291139 77291076 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 CDS 77292443 77292747 77292443 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 CDS 77293764 77293827 77293764 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 CDS 77295080 77295214 77295080 ID=MsG0380015965.01.T01:cds;Parent=MsG0380015965.01.T01
Chr3 three_prime_UTR 77295631 77295685 77295631 ID=MsG0380015965.01.T01:three_prime_utr;Parent=MsG0380015965.01.T01
Chr3 three_prime_UTR 77295946 77295989 77295946 ID=MsG0380015965.01.T01:three_prime_utr;Parent=MsG0380015965.01.T01
Chr3 three_prime_UTR 77297284 77297821 77297284 ID=MsG0380015965.01.T01:three_prime_utr;Parent=MsG0380015965.01.T01
Gene Sequence

>MsG0380015965.01.T01

ATGCATGTTGGGGGAGATTACAAAGCTCACAAAAGTGATTATCCATTTCTGTTTCACTTTTATGTTAATCATTCAGCAATTTTTGGCTGGCAGACCTTTGGGTGGACTCCACAAGAAGCTCAAATGCACATGGTCACCGACTATTTTAGTCATTCAGAATGGAAAGTGATTGCTGAGGTACTTGGGCCAAACCCTCGACATCTATTTGAGCTTTATGCACTTAAACAAAACAATTATCTCCACAAGACACCAGCAGACAGAGCTAGTACATTCGAGGACATTGTTGATGCTTATCTAGCATATTTGCAGATTTCTGTCGTGAATCCTGCAATGGATAGAGCATTGGAGATCTTGCAAAAATTTGCAATTGATGTACGCAATGGAAAGGTTTCAGATGACAAATTACGTTTTGGTGCACCTTGGAGGCATCCACCGAAGGTTGATGACCCTAAATTGCGCATGGAATGGGCAAAGCTTCAGTTGATGGATTTTGTTAAATCTCTGATCAATGCAGAATTTGGGGTAAATGTGCTTATCTTTTTTCAGTTTATAATTTTTCCTTGTGGGCAACAGTTCTATTGGAAAACAGAAGCTACTGGAGCCCGAAAAATATGGTCAATTATCGAATTGATTATAGTGAAGAAATTTGACGATCCTTCAGCTCTTGCATTACTGCAGGCTTGTCCAGCAGCGGATGGAGCTCAGGTTCCCTCAGTTGATTCGATTTCATTGGCACAGAATAATACGGGGGCGTTTTTATCGCCATTTGATGGTACAAGTAGACAGCAAGTATTAGGTAGAGCATCGCAATAG

Protein sequence

>MsG0380015965.01.T01

MHVGGDYKAHKSDYPFLFHFYVNHSAIFGWQTFGWTPQEAQMHMVTDYFSHSEWKVIAEVLGPNPRHLFELYALKQNNYLHKTPADRASTFEDIVDAYLAYLQISVVNPAMDRALEILQKFAIDVRNGKVSDDKLRFGAPWRHPPKVDDPKLRMEWAKLQLMDFVKSLINAEFGVNVLIFFQFIIFPCGQQFYWKTEATGARKIWSIIELIIVKKFDDPSALALLQACPAADGAQVPSVDSISLAQNNTGAFLSPFDGTSRQQVLGRASQ*