AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003697.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003697.01.T01 MTR_1g067600 86.833 281 33 1 133 409 75 355 2.10e-158 450
MsG0180003697.01.T01 MTR_1g067620 95.652 138 6 0 1 138 1 138 2.42e-94 280
MsG0180003697.01.T01 MTR_7g100328 47.600 250 119 2 146 391 90 331 4.36e-76 240
MsG0180003697.01.T01 MTR_1g093840 68.085 94 30 0 38 131 4 97 1.73e-34 124
MsG0180003697.01.T01 MTR_3g095070 36.500 200 121 4 194 390 112 308 5.02e-28 113
MsG0180003697.01.T01 MTR_8g035940 38.519 135 51 3 1 135 1 103 1.75e-17 78.2
MsG0180003697.01.T01 MTR_0077s0010 41.176 68 32 1 94 153 75 142 5.89e-13 66.2
MsG0180003697.01.T01 MTR_0077s0010 51.020 49 24 0 97 145 78 126 5.22e-12 63.5
MsG0180003697.01.T01 MTR_4g077777 36.667 90 51 2 62 145 34 123 1.15e-11 62.0
MsG0180003697.01.T01 MTR_4g111840 39.506 81 42 1 74 147 71 151 3.40e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003697.01.T01 AT2G37400 42.748 262 144 3 144 401 70 329 9.01e-63 205
MsG0180003697.01.T01 AT3G53560 44.493 227 123 1 183 406 108 334 9.16e-62 203
MsG0180003697.01.T01 AT3G53560 44.493 227 123 1 183 406 156 382 2.52e-61 203
MsG0180003697.01.T01 AT5G02590 45.128 195 106 1 198 392 122 315 3.50e-55 185
MsG0180003697.01.T01 AT3G09490 37.436 195 122 0 192 386 100 294 6.83e-35 132
MsG0180003697.01.T01 AT3G18420 33.984 256 151 6 155 406 74 315 2.91e-30 119
MsG0180003697.01.T01 AT4G39470 32.828 198 130 2 196 392 123 318 7.68e-29 115
MsG0180003697.01.T01 AT1G49000 46.429 56 30 0 90 145 97 152 6.19e-11 60.8

Find 83 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGGAAGAGGATTATT+TGG 0.207769 1:-66822281 MsG0180003697.01.T01:CDS
GTCGTAGCATTAATATTCTT+TGG 0.232114 1:+66826699 None:intergenic
ATTAATATTCTTTGGGGTAT+TGG 0.244506 1:+66826707 None:intergenic
TGCAAATGCACTTCGGTCTT+TGG 0.265201 1:-66822641 MsG0180003697.01.T01:CDS
GACTGACTAAATGAACTTAA+AGG 0.287583 1:+66826405 None:intergenic
TCCTCAAAATAATCTTTATA+AGG 0.293256 1:+66822106 None:intergenic
GATTGTGCTGGTGGTGGTGA+TGG 0.300457 1:+66822751 None:intergenic
AGTGGTGACCTGGCGGTGGC+GGG 0.310471 1:+66822775 None:intergenic
TCGTAGCATTAATATTCTTT+GGG 0.312220 1:+66826700 None:intergenic
ATTTGATTAGGTTCATGATT+TGG 0.322012 1:+66826753 None:intergenic
GAGTGGTGACCTGGCGGTGG+CGG 0.324527 1:+66822774 None:intergenic
ATTGGAGAAACTATTTGATT+AGG 0.333636 1:+66826741 None:intergenic
GAACTTAAAGGACTACTCTT+TGG 0.339644 1:+66826417 None:intergenic
TTGGAAATTGTTGGTGTGTA+AGG 0.342986 1:+66826795 None:intergenic
TGGTGATGGGAGTGGTGACC+TGG 0.354542 1:+66822765 None:intergenic
AGCAACAAATCAAATTCTTC+CGG 0.378703 1:+66822547 None:intergenic
CTACTCTTTGGCGGTGTCCT+TGG 0.386085 1:+66826429 None:intergenic
GGGTCCGGTGGTGGTGGTGG+AGG 0.394542 1:+66822729 None:intergenic
GGATTATTTGGGTGCATTGA+AGG 0.394856 1:-66822269 MsG0180003697.01.T01:CDS
ACAACACCCTGACACAAATA+AGG 0.396662 1:+66822205 None:intergenic
TTCGGGTCCGGTGGTGGTGG+TGG 0.400461 1:+66822726 None:intergenic
GTGGAGGATTGTGCTGGTGG+TGG 0.407119 1:+66822745 None:intergenic
ATTGTGCTGGTGGTGGTGAT+GGG 0.415078 1:+66822752 None:intergenic
GTGGTGGTGGAGGATTGTGC+TGG 0.418671 1:+66822739 None:intergenic
CGATAAGCTTCCGAGTTAAA+CGG 0.421630 1:+66822445 None:intergenic
TGCACTTCGGTCTTTGGTTG+AGG 0.421730 1:-66822635 MsG0180003697.01.T01:CDS
GGAGTATAGAAGACTTGTTC+CGG 0.433279 1:-66822137 MsG0180003697.01.T01:CDS
CCGAAGTGCATTTGCATCGT+TGG 0.434659 1:+66822648 None:intergenic
GTGGTGGAGGATTGTGCTGG+TGG 0.446113 1:+66822742 None:intergenic
CACATTCATAACGGTGAACA+TGG 0.449100 1:-66822508 MsG0180003697.01.T01:CDS
ACACGAGGTAATTTCCTTGT+TGG 0.452469 1:+66826677 None:intergenic
GTGGTGACCTGGCGGTGGCG+GGG 0.456511 1:+66822776 None:intergenic
CTCTTTGGCGGTGTCCTTGG+TGG 0.460012 1:+66826432 None:intergenic
GTGGAAGAAGACCATATTGA+TGG 0.460929 1:-66826526 MsG0180003697.01.T01:CDS
GTGATGGAAGAGGATTATTT+GGG 0.461860 1:-66822280 MsG0180003697.01.T01:CDS
ATGGATGGTTTGAGTCAATT+CGG 0.462445 1:-66826825 MsG0180003697.01.T01:CDS
GCTGGTGGTGGTGATGGGAG+TGG 0.474293 1:+66822757 None:intergenic
ACAAAGACAAATGATGTTGT+TGG 0.478030 1:+66826776 None:intergenic
TGGGAGTGGTGACCTGGCGG+TGG 0.482255 1:+66822771 None:intergenic
AACAAAACCCCGCCACCGCC+AGG 0.483548 1:-66822783 MsG0180003697.01.T01:CDS
ACGATTAATTGAACTCGAAC+CGG 0.493967 1:-66822566 MsG0180003697.01.T01:CDS
TTTAGACCTTATTTGTGTCA+GGG 0.502448 1:-66822211 MsG0180003697.01.T01:CDS
GTGTTGTTTATAGTTTGCTT+AGG 0.504927 1:-66822189 MsG0180003697.01.T01:CDS
GGGTGCATTGAAGGTGTATG+AGG 0.505020 1:-66822260 MsG0180003697.01.T01:CDS
TCATAACGGTGAACATGGAT+TGG 0.518308 1:-66822503 MsG0180003697.01.T01:CDS
ATGATGTTGTTGGAAATTGT+TGG 0.520142 1:+66826786 None:intergenic
CAATCCTCCACCACCACCAC+CGG 0.521381 1:-66822733 MsG0180003697.01.T01:CDS
TCTTTATAAGGATGACTCTC+CGG 0.523440 1:+66822118 None:intergenic
TTGTCGAAGAAGCTAGAGAA+AGG 0.525668 1:-66822070 MsG0180003697.01.T01:CDS
CTTAAAGGACTACTCTTTGG+CGG 0.533102 1:+66826420 None:intergenic
GCAATTTATTATGATAGTGA+AGG 0.536741 1:-66826471 MsG0180003697.01.T01:CDS
TCACATTTGCACATTCATAA+CGG 0.540515 1:-66822517 MsG0180003697.01.T01:CDS
TGAAGCTCAGAAACAGTTTG+AGG 0.544310 1:-66822158 MsG0180003697.01.T01:CDS
TGGAAGAAGACCATATTGAT+GGG 0.555682 1:-66826525 MsG0180003697.01.T01:CDS
TTTGGGGTATTGGTATGTGA+TGG 0.563589 1:+66826717 None:intergenic
AAATTGTTGGTGTGTAAGGA+TGG 0.565436 1:+66826799 None:intergenic
TAGCTTCTTCGACAAAACCT+TGG 0.570727 1:+66822078 None:intergenic
CAATTTATTATGATAGTGAA+GGG 0.573876 1:-66826470 MsG0180003697.01.T01:CDS
CAATCATAGGACATGATGGA+TGG 0.574776 1:-66826840 None:intergenic
GCAGGTGAAGGTGATGGAAG+AGG 0.577382 1:-66822290 MsG0180003697.01.T01:CDS
CGTAGCATTAATATTCTTTG+GGG 0.578430 1:+66826701 None:intergenic
AAGCGAAGCTATTCGTGTTG+TGG 0.583660 1:-66822590 MsG0180003697.01.T01:CDS
AATTGCGCAGGTGAAGGTGA+TGG 0.587282 1:-66822296 MsG0180003697.01.T01:CDS
TTCGGAGTTGAAAGAGCCAA+TGG 0.593450 1:-66822404 MsG0180003697.01.T01:CDS
GAGTTGAAAGAGCCAATGGA+GGG 0.607803 1:-66822400 MsG0180003697.01.T01:CDS
GTATTGGTATGTGATGGCAT+TGG 0.613615 1:+66826723 None:intergenic
CTTCAAAAGAAAGCAGCGAG+AGG 0.615678 1:-66826646 MsG0180003697.01.T01:CDS
GCAGCAAGATCCGTTTAACT+CGG 0.618969 1:-66822455 MsG0180003697.01.T01:CDS
GAACATGGATTGGCTAAGAG+AGG 0.630949 1:-66822493 MsG0180003697.01.T01:CDS
TCGAAGAAGCTAGAGAAAGG+AGG 0.633094 1:-66822067 MsG0180003697.01.T01:CDS
CCAACGATGCAAATGCACTT+CGG 0.633763 1:-66822648 MsG0180003697.01.T01:CDS
ATTGCACCTGAAAATACCAA+TGG 0.633849 1:+66826489 None:intergenic
TGATGGGAGTGGTGACCTGG+CGG 0.633960 1:+66822768 None:intergenic
GGAGTTGAAAGAGCCAATGG+AGG 0.637662 1:-66822401 MsG0180003697.01.T01:CDS
TTTAACTCGGAAGCTTATCG+CGG 0.648904 1:-66822442 MsG0180003697.01.T01:CDS
AAGAAGATGATGAATGCTTG+TGG 0.651549 1:-66826545 MsG0180003697.01.T01:CDS
AAATAAGGTCTAAAATCACT+CGG 0.653706 1:+66822220 None:intergenic
GGAAGAAGACCATATTGATG+GGG 0.657018 1:-66826524 MsG0180003697.01.T01:CDS
ATCAGATTTCTGAGCCACCA+AGG 0.660852 1:-66826446 MsG0180003697.01.T01:CDS
TATTAATGCTACGACCAACA+AGG 0.667088 1:-66826691 MsG0180003697.01.T01:CDS
TTTGAAGCAAATAGTACACG+AGG 0.667567 1:+66826662 None:intergenic
GAAGAAGACCATATTGATGG+GGG 0.673380 1:-66826523 MsG0180003697.01.T01:CDS
GGTGTATGAGGAAATTGTGA+AGG 0.676790 1:-66822248 MsG0180003697.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATATATAAAATAAAA+AGG + Chr1:66824910-66824929 None:intergenic 0.0%
!!! TTTTTTTATATATAATTTTT+TGG + Chr1:66822992-66823011 None:intergenic 0.0%
!! TTCTGATATTATATTATTTA+CGG + Chr1:66825730-66825749 None:intergenic 10.0%
!!! AATATATGTTTTATTCTTAA+AGG - Chr1:66823842-66823861 MsG0180003697.01.T01:intron 10.0%
!!! ACAAAATAGAATTAAAATTT+TGG - Chr1:66823722-66823741 MsG0180003697.01.T01:intron 10.0%
!!! TGATTATTTTTAACTTTTTT+GGG + Chr1:66825341-66825360 None:intergenic 10.0%
!!! TTCTTTATTTGATAATTTTT+CGG + Chr1:66826165-66826184 None:intergenic 10.0%
!!! TTGATTATTTTTAACTTTTT+TGG + Chr1:66825342-66825361 None:intergenic 10.0%
!! AAATAATATAATATCAGAAC+AGG - Chr1:66825731-66825750 MsG0180003697.01.T01:intron 15.0%
!! AATAAAAAGGTAATACAAAA+AGG + Chr1:66824897-66824916 None:intergenic 15.0%
!! AATAATATAATATCAGAACA+GGG - Chr1:66825732-66825751 MsG0180003697.01.T01:intron 15.0%
!! ACAAATCAACTAAAATTATA+AGG - Chr1:66822494-66822513 MsG0180003697.01.T01:CDS 15.0%
!! ATAAAAAGGTAATACAAAAA+GGG + Chr1:66824896-66824915 None:intergenic 15.0%
!! ATCATAAAATATGTAATGTT+CGG + Chr1:66822828-66822847 None:intergenic 15.0%
!! GTAAATTAAATATTGAAATG+TGG + Chr1:66822636-66822655 None:intergenic 15.0%
!! TAAAAAAATACTTACATTGA+CGG - Chr1:66822965-66822984 MsG0180003697.01.T01:intron 15.0%
!! TAAAAAACAAGTATTATGAA+TGG + Chr1:66825048-66825067 None:intergenic 15.0%
!! TTATTTACTCATGAAATAAA+TGG + Chr1:66823279-66823298 None:intergenic 15.0%
!! TTTCAAAAACAACAAAATTT+CGG + Chr1:66822891-66822910 None:intergenic 15.0%
!!! AAGTACACTTTTATATTTTT+AGG - Chr1:66822583-66822602 MsG0180003697.01.T01:CDS 15.0%
!!! ACAAAAGTTTTTGTTTTTTT+TGG - Chr1:66823017-66823036 MsG0180003697.01.T01:intron 15.0%
!!! AGTACACTTTTATATTTTTA+GGG - Chr1:66822584-66822603 MsG0180003697.01.T01:CDS 15.0%
!!! AGTTATATTTTCTTAAATAG+TGG - Chr1:66823761-66823780 MsG0180003697.01.T01:intron 15.0%
!!! ATCTTACATATTTTATACAT+TGG - Chr1:66825612-66825631 MsG0180003697.01.T01:intron 15.0%
!!! GATTATTTTTAACTTTTTTG+GGG + Chr1:66825340-66825359 None:intergenic 15.0%
!!! TATATTTTTTTTTTTGTTGC+CGG - Chr1:66825575-66825594 MsG0180003697.01.T01:intron 15.0%
!!! TCTTTATTTGATAATTTTTC+GGG + Chr1:66826164-66826183 None:intergenic 15.0%
!! AATTTAGTGTTTGAATGAAA+AGG + Chr1:66824064-66824083 None:intergenic 20.0%
!! ATAATATAATATCAGAACAG+GGG - Chr1:66825733-66825752 MsG0180003697.01.T01:intron 20.0%
!! ATATCAAAGATTTCATTTCA+TGG - Chr1:66825439-66825458 MsG0180003697.01.T01:intron 20.0%
!! ATTTAGTGTTTGAATGAAAA+GGG + Chr1:66824063-66824082 None:intergenic 20.0%
!! TAAAAAGGTAATACAAAAAG+GGG + Chr1:66824895-66824914 None:intergenic 20.0%
!! TATAAAATATGTAAGATCTG+AGG + Chr1:66825609-66825628 None:intergenic 20.0%
!! TCATAAAATATGTAATGTTC+GGG + Chr1:66822827-66822846 None:intergenic 20.0%
!! TCCTCAAAATAATCTTTATA+AGG + Chr1:66826767-66826786 None:intergenic 20.0%
!! TTTATATGATCATTGTAGAT+TGG - Chr1:66823937-66823956 MsG0180003697.01.T01:intron 20.0%
!!! AATTAATGTTGATTTTCTAG+AGG - Chr1:66823960-66823979 MsG0180003697.01.T01:intron 20.0%
!!! AATTTTTTAGGCATGTATAT+GGG - Chr1:66822722-66822741 MsG0180003697.01.T01:CDS 20.0%
!!! ATATTTTTTTTTTTGTTGCC+GGG - Chr1:66825576-66825595 MsG0180003697.01.T01:intron 20.0%
!!! ATTAATGTTGATTTTCTAGA+GGG - Chr1:66823961-66823980 MsG0180003697.01.T01:intron 20.0%
!!! CAATTTATTATGATAGTGAA+GGG - Chr1:66822400-66822419 MsG0180003697.01.T01:CDS 20.0%
!!! GTACACTTTTATATTTTTAG+GGG - Chr1:66822585-66822604 MsG0180003697.01.T01:CDS 20.0%
!!! GTTAGTATTTAGAACATAAA+TGG + Chr1:66825268-66825287 None:intergenic 20.0%
!!! GTTTTTTGAAGAGAAAAAAA+TGG - Chr1:66826523-66826542 MsG0180003697.01.T01:CDS 20.0%
!!! TAATTTTTTAGGCATGTATA+TGG - Chr1:66822721-66822740 MsG0180003697.01.T01:CDS 20.0%
!!! TATGTTTTATTCTTAAAGGA+TGG - Chr1:66823846-66823865 MsG0180003697.01.T01:intron 20.0%
!!! TCCTTATAAAGATTATTTTG+AGG - Chr1:66826763-66826782 MsG0180003697.01.T01:CDS 20.0%
!!! TTTTATATTTTTAGGGGATA+TGG - Chr1:66822591-66822610 MsG0180003697.01.T01:CDS 20.0%
! AAAAAGGTAATACAAAAAGG+GGG + Chr1:66824894-66824913 None:intergenic 25.0%
! AAAATATATGTTGCCTCTAA+CGG + Chr1:66825563-66825582 None:intergenic 25.0%
! AAGAAGCAATTCTAAATTCT+AGG - Chr1:66825474-66825493 MsG0180003697.01.T01:intron 25.0%
! AATACAAAAGATAACATGAG+TGG + Chr1:66824827-66824846 None:intergenic 25.0%
! ATTGGAGAAACTATTTGATT+AGG + Chr1:66822132-66822151 None:intergenic 25.0%
! ATTTGATTAGGTTCATGATT+TGG + Chr1:66822120-66822139 None:intergenic 25.0%
! CATAAAATATGTAATGTTCG+GGG + Chr1:66822826-66822845 None:intergenic 25.0%
! CATATATTGTGCTATATTGT+GGG - Chr1:66825176-66825195 MsG0180003697.01.T01:intron 25.0%
! CGCATTGAACTATATATATA+AGG - Chr1:66822939-66822958 MsG0180003697.01.T01:intron 25.0%
! CTATGAACTTTATGTGTTAT+TGG + Chr1:66825317-66825336 None:intergenic 25.0%
! GTACTAACTAAAATAGATTC+AGG - Chr1:66825017-66825036 MsG0180003697.01.T01:intron 25.0%
! TACATAGATAGTTAATTCAG+AGG - Chr1:66823171-66823190 MsG0180003697.01.T01:intron 25.0%
! TCGTAGCATTAATATTCTTT+GGG + Chr1:66822173-66822192 None:intergenic 25.0%
! TTAGCTTAGTTGAAATGAAA+TGG + Chr1:66825638-66825657 None:intergenic 25.0%
! TTCCCTAAAAAAAAGTTCAT+GGG - Chr1:66825237-66825256 MsG0180003697.01.T01:intron 25.0%
! TTTATATGATCGTTGTAGAT+TGG - Chr1:66823885-66823904 MsG0180003697.01.T01:intron 25.0%
!! AAATAAGGTCTAAAATCACT+CGG + Chr1:66826653-66826672 None:intergenic 25.0%
!! GCAATTTATTATGATAGTGA+AGG - Chr1:66822399-66822418 MsG0180003697.01.T01:CDS 25.0%
!! GTGGTGTAATTTAAAGTTAA+AGG + Chr1:66824023-66824042 None:intergenic 25.0%
!! GTGTAATTTAAAGTTAAAGG+AGG + Chr1:66824020-66824039 None:intergenic 25.0%
!! TCAATATCTCTTCTTTTTGT+TGG - Chr1:66823078-66823097 MsG0180003697.01.T01:intron 25.0%
!! TTCTGAAAAATCTAGAGATT+AGG + Chr1:66823997-66824016 None:intergenic 25.0%
!! TTTGATTTCACGTCTTATTA+TGG + Chr1:66823398-66823417 None:intergenic 25.0%
!! TTTTGTTCCTATTGAAAGAT+CGG + Chr1:66823369-66823388 None:intergenic 25.0%
!!! ATTAATATTCTTTGGGGTAT+TGG + Chr1:66822166-66822185 None:intergenic 25.0%
!!! CTTTTTCATTTTGAAAAGCT+GGG + Chr1:66822304-66822323 None:intergenic 25.0%
!!! TATTTTTTTTTTTGTTGCCG+GGG - Chr1:66825577-66825596 MsG0180003697.01.T01:intron 25.0%
!!! TTTTGAGAATTTGAGAGAAA+GGG + Chr1:66825986-66826005 None:intergenic 25.0%
!!! TTTTTTTTGCAGAGAATTGT+TGG - Chr1:66824620-66824639 MsG0180003697.01.T01:intron 25.0%
AAAAAAAAGAGCAAGCAACA+AGG + Chr1:66824604-66824623 None:intergenic 30.0%
AAGGGAAAGAAGAAAGAATA+AGG + Chr1:66824045-66824064 None:intergenic 30.0%
AATAAATGGATACACGTCAA+CGG + Chr1:66823265-66823284 None:intergenic 30.0%
ACAAAGACAAATGATGTTGT+TGG + Chr1:66822097-66822116 None:intergenic 30.0%
ACCACAAAATCAACTCTAAT+AGG + Chr1:66824852-66824871 None:intergenic 30.0%
AGCAACAAATCAAATTCTTC+CGG + Chr1:66826326-66826345 None:intergenic 30.0%
ATATAGCACAATATATGCAG+CGG + Chr1:66825173-66825192 None:intergenic 30.0%
ATGATGTTGTTGGAAATTGT+TGG + Chr1:66822087-66822106 None:intergenic 30.0%
CAAAAACAACAAAATTTCGG+AGG + Chr1:66822888-66822907 None:intergenic 30.0%
CAAAAGATGAGTTCATTCTT+TGG - Chr1:66824691-66824710 MsG0180003697.01.T01:intron 30.0%
CAAAGTAGGAGAAACAAAAA+AGG - Chr1:66823231-66823250 MsG0180003697.01.T01:intron 30.0%
CCACAAAATCAACTCTAATA+GGG + Chr1:66824851-66824870 None:intergenic 30.0%
CGTAGCATTAATATTCTTTG+GGG + Chr1:66822172-66822191 None:intergenic 30.0%
CTTCCCTAAAAAAAAGTTCA+TGG - Chr1:66825236-66825255 MsG0180003697.01.T01:intron 30.0%
GACTGACTAAATGAACTTAA+AGG + Chr1:66822468-66822487 None:intergenic 30.0%
GAGACAACATATAGTGAAAA+GGG - Chr1:66825679-66825698 MsG0180003697.01.T01:intron 30.0%
GAGTGGTATTAAAACACAAT+CGG + Chr1:66824810-66824829 None:intergenic 30.0%
GCATATATTGTGCTATATTG+TGG - Chr1:66825175-66825194 MsG0180003697.01.T01:intron 30.0%
GTAGTTGCAACAAATTCTTA+TGG - Chr1:66824568-66824587 MsG0180003697.01.T01:intron 30.0%
GTCGTAGCATTAATATTCTT+TGG + Chr1:66822174-66822193 None:intergenic 30.0%
TAAATTACAAGATGTGACCT+TGG - Chr1:66824078-66824097 MsG0180003697.01.T01:intron 30.0%
TCACATTTGCACATTCATAA+CGG - Chr1:66826353-66826372 MsG0180003697.01.T01:intron 30.0%
TTGATAGAGGGTAGTAATAA+GGG + Chr1:66825909-66825928 None:intergenic 30.0%
TTTGATAGAGGGTAGTAATA+AGG + Chr1:66825910-66825929 None:intergenic 30.0%
! AATTTGAGAGAAAGGGTTTT+GGG + Chr1:66825979-66825998 None:intergenic 30.0%
! TGGTGATAAAGATAGGTTTT+GGG + Chr1:66825813-66825832 None:intergenic 30.0%
! TTATTGACTAGTACCAAAGT+AGG - Chr1:66823217-66823236 MsG0180003697.01.T01:intron 30.0%
! TTTAGACCTTATTTGTGTCA+GGG - Chr1:66826659-66826678 MsG0180003697.01.T01:CDS 30.0%
!! ATTTAAGCTTTTAATTGCGC+AGG - Chr1:66826562-66826581 MsG0180003697.01.T01:CDS 30.0%
!! CTTAAATTTGTTGTCGACTT+TGG - Chr1:66824506-66824525 MsG0180003697.01.T01:intron 30.0%
!! GTGTTGTTTATAGTTTGCTT+AGG - Chr1:66826681-66826700 MsG0180003697.01.T01:CDS 30.0%
!! TTAGTTTGTTCTGATGAAAG+AGG - Chr1:66825399-66825418 MsG0180003697.01.T01:intron 30.0%
!! TTTTAGACCTTATTTGTGTC+AGG - Chr1:66826658-66826677 MsG0180003697.01.T01:CDS 30.0%
!!! AATGGAGGGTTTTTTGAATA+GGG - Chr1:66826484-66826503 MsG0180003697.01.T01:CDS 30.0%
!!! AGGCAAACACTTTTTTTTTG+TGG - Chr1:66822785-66822804 MsG0180003697.01.T01:CDS 30.0%
!!! AGTCCCATGAACTTTTTTTT+AGG + Chr1:66825243-66825262 None:intergenic 30.0%
!!! ATTTGATAATTTTTCGGGTC+CGG + Chr1:66826159-66826178 None:intergenic 30.0%
!!! CTTTTTTGTTTCTCCTACTT+TGG + Chr1:66823233-66823252 None:intergenic 30.0%
!!! GCTTTTTCATTTTGAAAAGC+TGG + Chr1:66822305-66822324 None:intergenic 30.0%
!!! GTCCCATGAACTTTTTTTTA+GGG + Chr1:66825242-66825261 None:intergenic 30.0%
!!! GTTTTGAGAATTTGAGAGAA+AGG + Chr1:66825987-66826006 None:intergenic 30.0%
!!! TTTTTTGAATAGGGTTGATG+AGG - Chr1:66826493-66826512 MsG0180003697.01.T01:CDS 30.0%
!!! TTTTTTGTCAAGTAGTCTAG+TGG - Chr1:66825091-66825110 MsG0180003697.01.T01:intron 30.0%
AAAAAATGGAGTCAGAAGCT+AGG - Chr1:66826537-66826556 MsG0180003697.01.T01:CDS 35.0%
AAAAATGGAGTCAGAAGCTA+GGG - Chr1:66826538-66826557 MsG0180003697.01.T01:CDS 35.0%
AAATTGTTGGTGTGTAAGGA+TGG + Chr1:66822074-66822093 None:intergenic 35.0%
AACACAGAACTAGCATATCA+TGG + Chr1:66824270-66824289 None:intergenic 35.0%
AAGAAGATGATGAATGCTTG+TGG - Chr1:66822325-66822344 MsG0180003697.01.T01:CDS 35.0%
ACATTAAACAACAACCGTAG+TGG + Chr1:66824548-66824567 None:intergenic 35.0%
ACCAAATGAGCTAAGTTCAT+GGG - Chr1:66825208-66825227 MsG0180003697.01.T01:intron 35.0%
ACCTTAAAGACGAATAAGTG+GGG - Chr1:66825126-66825145 MsG0180003697.01.T01:intron 35.0%
ACGATTAATTGAACTCGAAC+CGG - Chr1:66826304-66826323 MsG0180003697.01.T01:intron 35.0%
ACTGAAAGGAACCAAAAGTT+AGG + Chr1:66824776-66824795 None:intergenic 35.0%
ATGAACGATAGACATAGCAA+TGG + Chr1:66823625-66823644 None:intergenic 35.0%
ATGGATGGTTTGAGTCAATT+CGG - Chr1:66822045-66822064 MsG0180003697.01.T01:CDS 35.0%
ATTGCACCTGAAAATACCAA+TGG + Chr1:66822384-66822403 None:intergenic 35.0%
CACCTTAAAGACGAATAAGT+GGG - Chr1:66825125-66825144 MsG0180003697.01.T01:intron 35.0%
CGAAAAGAATTCGAACTCAA+AGG + Chr1:66824412-66824431 None:intergenic 35.0%
CGAGACAACATATAGTGAAA+AGG - Chr1:66825678-66825697 MsG0180003697.01.T01:intron 35.0%
CTATTCAAAAAACCCTCCAT+TGG + Chr1:66826485-66826504 None:intergenic 35.0%
CTTGATGCCTTATCTTTGAT+TGG + Chr1:66822767-66822786 None:intergenic 35.0%
CTTTGAATCTGTTACTGTAG+TGG - Chr1:66824644-66824663 MsG0180003697.01.T01:intron 35.0%
GAACTTAAAGGACTACTCTT+TGG + Chr1:66822456-66822475 None:intergenic 35.0%
GAACTTAGCTCATTTGGTAA+GGG + Chr1:66825206-66825225 None:intergenic 35.0%
GATTATTCAGAGCATGAAGA+TGG + Chr1:66822532-66822551 None:intergenic 35.0%
GGAAAGAAGAAAGAATAAGG+TGG + Chr1:66824042-66824061 None:intergenic 35.0%
TACCAAATGAGCTAAGTTCA+TGG - Chr1:66825207-66825226 MsG0180003697.01.T01:intron 35.0%
TATTAATGCTACGACCAACA+AGG - Chr1:66822179-66822198 MsG0180003697.01.T01:CDS 35.0%
TCACCTTAAAGACGAATAAG+TGG - Chr1:66825124-66825143 MsG0180003697.01.T01:intron 35.0%
TCTTTATAAGGATGACTCTC+CGG + Chr1:66826755-66826774 None:intergenic 35.0%
TGAACGATAGACATAGCAAT+GGG + Chr1:66823624-66823643 None:intergenic 35.0%
TGAACTTAGCTCATTTGGTA+AGG + Chr1:66825207-66825226 None:intergenic 35.0%
TGAGAGAAGGAGAACTTAAA+AGG - Chr1:66823494-66823513 MsG0180003697.01.T01:intron 35.0%
TGATAGAGGGTAGTAATAAG+GGG + Chr1:66825908-66825927 None:intergenic 35.0%
TGGAAGAAGACCATATTGAT+GGG - Chr1:66822345-66822364 MsG0180003697.01.T01:CDS 35.0%
TTGGAAATTGTTGGTGTGTA+AGG + Chr1:66822078-66822097 None:intergenic 35.0%
! AACCATACGTGAAAACCTTT+TGG + Chr1:66824484-66824503 None:intergenic 35.0%
! ATTTGAGAGAAAGGGTTTTG+GGG + Chr1:66825978-66825997 None:intergenic 35.0%
! CAATCAAAGATAAGGCATCA+AGG - Chr1:66822765-66822784 MsG0180003697.01.T01:CDS 35.0%
! GAATTTGAGAGAAAGGGTTT+TGG + Chr1:66825980-66825999 None:intergenic 35.0%
! GGGTTGTTGTTGTTGTTATT+TGG + Chr1:66825945-66825964 None:intergenic 35.0%
! GGTGATAAAGATAGGTTTTG+GGG + Chr1:66825812-66825831 None:intergenic 35.0%
! GTGATGGAAGAGGATTATTT+GGG - Chr1:66826590-66826609 MsG0180003697.01.T01:CDS 35.0%
! GTGGTGATAAAGATAGGTTT+TGG + Chr1:66825814-66825833 None:intergenic 35.0%
! TGTCAACCATTGGTATTTTC+AGG - Chr1:66822375-66822394 MsG0180003697.01.T01:CDS 35.0%
! TTTGAAGCAAATAGTACACG+AGG + Chr1:66822211-66822230 None:intergenic 35.0%
! TTTGGGGAGAGAATTCATTT+TGG + Chr1:66825796-66825815 None:intergenic 35.0%
!! ATGATATGCTAGTTCTGTGT+TGG - Chr1:66824269-66824288 MsG0180003697.01.T01:intron 35.0%
!! CCCTATTAGAGTTGATTTTG+TGG - Chr1:66824848-66824867 MsG0180003697.01.T01:intron 35.0%
!! GTTGTTGTTGTTATTTGGAG+AGG + Chr1:66825940-66825959 None:intergenic 35.0%
!! TCATTTTGAAAAGCTGGGAA+TGG + Chr1:66822299-66822318 None:intergenic 35.0%
!! TGTGTTGGTTTGATTGAAAC+CGG - Chr1:66824284-66824303 MsG0180003697.01.T01:intron 35.0%
!!! CAATGGAGGGTTTTTTGAAT+AGG - Chr1:66826483-66826502 MsG0180003697.01.T01:CDS 35.0%
!!! GACTTTACCACCTGTTTTTT+TGG - Chr1:66824125-66824144 MsG0180003697.01.T01:intron 35.0%
!!! GAGAGAATTCATTTTGGCTA+AGG + Chr1:66825790-66825809 None:intergenic 35.0%
!!! GATGTTTTAATGCTTCTAGC+TGG - Chr1:66824222-66824241 MsG0180003697.01.T01:intron 35.0%
!!! GGTTTTGGGGTTTTTGAAAA+GGG + Chr1:66825965-66825984 None:intergenic 35.0%
!!! TTATTTTGAGGATAACGCCA+AGG - Chr1:66826775-66826794 MsG0180003697.01.T01:CDS 35.0%
AAGAAACCACCATCTACCAA+AGG + Chr1:66824388-66824407 None:intergenic 40.0%
AAGAAGAGAATGAGTGAGAG+GGG + Chr1:66825881-66825900 None:intergenic 40.0%
ACAACACCCTGACACAAATA+AGG + Chr1:66826668-66826687 None:intergenic 40.0%
ACACGAGGTAATTTCCTTGT+TGG + Chr1:66822196-66822215 None:intergenic 40.0%
ACCCCACTTATTCGTCTTTA+AGG + Chr1:66825130-66825149 None:intergenic 40.0%
ACTGAAGCCGATCTTTCAAT+AGG - Chr1:66823359-66823378 MsG0180003697.01.T01:intron 40.0%
AGAGAGGTGGTGATAAAGAT+AGG + Chr1:66825820-66825839 None:intergenic 40.0%
AGAGTTTAGGGAATGAAGAG+TGG + Chr1:66825854-66825873 None:intergenic 40.0%
AGCCAAAAACAACGAAAGCA+AGG - Chr1:66825526-66825545 MsG0180003697.01.T01:intron 40.0%
ATAGAGGGTAGTAATAAGGG+GGG + Chr1:66825906-66825925 None:intergenic 40.0%
ATGGATACGCATATGAGAGT+AGG - Chr1:66823559-66823578 MsG0180003697.01.T01:intron 40.0%
ATTACCCTACCCATATCCAA+CGG + Chr1:66823541-66823560 None:intergenic 40.0%
CACATTCATAACGGTGAACA+TGG - Chr1:66826362-66826381 MsG0180003697.01.T01:intron 40.0%
CGATAAGCTTCCGAGTTAAA+CGG + Chr1:66826428-66826447 None:intergenic 40.0%
CGGACAAAAAGTTCACTGAA+AGG + Chr1:66824790-66824809 None:intergenic 40.0%
CTCCTTCTCTCATTGAAGAT+GGG + Chr1:66823486-66823505 None:intergenic 40.0%
CTTAAAGGACTACTCTTTGG+CGG + Chr1:66822453-66822472 None:intergenic 40.0%
GAACGATAGACATAGCAATG+GGG + Chr1:66823623-66823642 None:intergenic 40.0%
GAAGAAGACCATATTGATGG+GGG - Chr1:66822347-66822366 MsG0180003697.01.T01:CDS 40.0%
GAAGAAGAGAATGAGTGAGA+GGG + Chr1:66825882-66825901 None:intergenic 40.0%
GATAGAGGGTAGTAATAAGG+GGG + Chr1:66825907-66825926 None:intergenic 40.0%
GCGTCGAAAAAAGTCCAAAA+CGG + Chr1:66824335-66824354 None:intergenic 40.0%
GGAAGAAGACCATATTGATG+GGG - Chr1:66822346-66822365 MsG0180003697.01.T01:CDS 40.0%
GGATTATTTGGGTGCATTGA+AGG - Chr1:66826601-66826620 MsG0180003697.01.T01:CDS 40.0%
GGTGTATGAGGAAATTGTGA+AGG - Chr1:66826622-66826641 MsG0180003697.01.T01:CDS 40.0%
GGTTTGATTGAAACCGGAAA+GGG - Chr1:66824290-66824309 MsG0180003697.01.T01:intron 40.0%
GTATATGGGTGCAATTGTCA+GGG - Chr1:66822736-66822755 MsG0180003697.01.T01:CDS 40.0%
GTCTGTCAACGATATTGTTG+TGG + Chr1:66823669-66823688 None:intergenic 40.0%
GTGGAAGAAGACCATATTGA+TGG - Chr1:66822344-66822363 MsG0180003697.01.T01:CDS 40.0%
TAGCTTCTTCGACAAAACCT+TGG + Chr1:66826795-66826814 None:intergenic 40.0%
TCAAACAATGCCGCACAATA+CGG - Chr1:66823413-66823432 MsG0180003697.01.T01:intron 40.0%
TCATAACGGTGAACATGGAT+TGG - Chr1:66826367-66826386 MsG0180003697.01.T01:intron 40.0%
TCCCATGAACTTAGCTCATT+TGG + Chr1:66825212-66825231 None:intergenic 40.0%
TCTCCTTCTCTCATTGAAGA+TGG + Chr1:66823487-66823506 None:intergenic 40.0%
TCTGCAGTTTCAAGGTGATA+AGG - Chr1:66824444-66824463 MsG0180003697.01.T01:intron 40.0%
TGAAGAAGAGAATGAGTGAG+AGG + Chr1:66825883-66825902 None:intergenic 40.0%
TGAAGCTCAGAAACAGTTTG+AGG - Chr1:66826712-66826731 MsG0180003697.01.T01:CDS 40.0%
TGGATACGCATATGAGAGTA+GGG - Chr1:66823560-66823579 MsG0180003697.01.T01:intron 40.0%
TGGTTTGATTGAAACCGGAA+AGG - Chr1:66824289-66824308 MsG0180003697.01.T01:intron 40.0%
TGTATATGGGTGCAATTGTC+AGG - Chr1:66822735-66822754 MsG0180003697.01.T01:CDS 40.0%
TGTTGAGATCTGCAGTTTCA+AGG - Chr1:66824436-66824455 MsG0180003697.01.T01:intron 40.0%
TGTTTGCAACCTTTGGTAGA+TGG - Chr1:66824376-66824395 MsG0180003697.01.T01:intron 40.0%
TTGTCGAAGAAGCTAGAGAA+AGG - Chr1:66826800-66826819 MsG0180003697.01.T01:CDS 40.0%
TTTAACTCGGAAGCTTATCG+CGG - Chr1:66826428-66826447 MsG0180003697.01.T01:CDS 40.0%
! CACCAAAAGGTTTTCACGTA+TGG - Chr1:66824479-66824498 MsG0180003697.01.T01:intron 40.0%
! CTGGATTTGTTTGCAACCTT+TGG - Chr1:66824369-66824388 MsG0180003697.01.T01:intron 40.0%
! GGAGTATAGAAGACTTGTTC+CGG - Chr1:66826733-66826752 MsG0180003697.01.T01:CDS 40.0%
! GTATTCGTGTGCCTAACTTT+TGG - Chr1:66824762-66824781 MsG0180003697.01.T01:intron 40.0%
! GTATTGGTATGTGATGGCAT+TGG + Chr1:66822150-66822169 None:intergenic 40.0%
! TGATGAAACACCTTTTGTGG+CGG + Chr1:66824165-66824184 None:intergenic 40.0%
!! AGAGTTGATTTTGTGGTTGC+TGG - Chr1:66824855-66824874 MsG0180003697.01.T01:intron 40.0%
!! CACCTTGCTTTCGTTGTTTT+TGG + Chr1:66825531-66825550 None:intergenic 40.0%
!! GGTGATGGAAGAGGATTATT+TGG - Chr1:66826589-66826608 MsG0180003697.01.T01:CDS 40.0%
!! GTGAAAACCTTTTGGTGTAG+TGG + Chr1:66824476-66824495 None:intergenic 40.0%
!! GTTGTTGTTATTTGGAGAGG+AGG + Chr1:66825937-66825956 None:intergenic 40.0%
!! TTTGGGGTATTGGTATGTGA+TGG + Chr1:66822156-66822175 None:intergenic 40.0%
!!! GGGTTTTGGGGTTTTTGAAA+AGG + Chr1:66825966-66825985 None:intergenic 40.0%
!!! TTTTTTTTTGTTGCCGGGGT+TGG - Chr1:66825581-66825600 MsG0180003697.01.T01:intron 40.0%
AAATCCAGAACCCATCCACA+TGG + Chr1:66824357-66824376 None:intergenic 45.0%
AAGCGAAGCTATTCGTGTTG+TGG - Chr1:66826280-66826299 MsG0180003697.01.T01:intron 45.0%
AATGTTCGGGGTTCGAACAT+CGG + Chr1:66822814-66822833 None:intergenic 45.0%
ACATCTCTCCCCCATCAATA+TGG + Chr1:66822358-66822377 None:intergenic 45.0%
ACGCATATGAGAGTAGGGTA+TGG - Chr1:66823565-66823584 MsG0180003697.01.T01:intron 45.0%
AGAGGATATCAGACCCTTTC+CGG + Chr1:66824306-66824325 None:intergenic 45.0%
AGGTGAGGTAAAGGGGTTAA+GGG + Chr1:66826009-66826028 None:intergenic 45.0%
ATCAGATTTCTGAGCCACCA+AGG - Chr1:66822424-66822443 MsG0180003697.01.T01:CDS 45.0%
CACATCTTTCGACTCCACTA+CGG - Chr1:66824531-66824550 MsG0180003697.01.T01:intron 45.0%
CACCCATCTTCAATGAGAGA+AGG - Chr1:66823481-66823500 MsG0180003697.01.T01:intron 45.0%
CCAACGATGCAAATGCACTT+CGG - Chr1:66826222-66826241 MsG0180003697.01.T01:intron 45.0%
CGCATATGAGAGTAGGGTAT+GGG - Chr1:66823566-66823585 MsG0180003697.01.T01:intron 45.0%
CTTCAAAAGAAAGCAGCGAG+AGG - Chr1:66822224-66822243 MsG0180003697.01.T01:CDS 45.0%
GAGTTGAAAGAGCCAATGGA+GGG - Chr1:66826470-66826489 MsG0180003697.01.T01:CDS 45.0%
GCAGCAAGATCCGTTTAACT+CGG - Chr1:66826415-66826434 MsG0180003697.01.T01:CDS 45.0%
GCATATGAGAGTAGGGTATG+GGG - Chr1:66823567-66823586 MsG0180003697.01.T01:intron 45.0%
GTGAAAAGGGTTTAGCGCTT+TGG - Chr1:66825692-66825711 MsG0180003697.01.T01:intron 45.0%
GTTGCTACCACTACACCAAA+AGG - Chr1:66824466-66824485 MsG0180003697.01.T01:intron 45.0%
GTTGGATATGGGTAGGGTAA+TGG - Chr1:66823540-66823559 MsG0180003697.01.T01:intron 45.0%
GTTTAGGGAATGAAGAGTGG+CGG + Chr1:66825851-66825870 None:intergenic 45.0%
TACAAGATGTGACCTTGGTG+TGG - Chr1:66824083-66824102 MsG0180003697.01.T01:intron 45.0%
TCGAAGAAGCTAGAGAAAGG+AGG - Chr1:66826803-66826822 MsG0180003697.01.T01:CDS 45.0%
TCGAAGAGAGGTGAGGTAAA+GGG + Chr1:66826017-66826036 None:intergenic 45.0%
TGCAAATGCACTTCGGTCTT+TGG - Chr1:66826229-66826248 MsG0180003697.01.T01:intron 45.0%
TTACCCTACCCATATCCAAC+GGG + Chr1:66823540-66823559 None:intergenic 45.0%
TTCGAAGAGAGGTGAGGTAA+AGG + Chr1:66826018-66826037 None:intergenic 45.0%
TTCGGAGTTGAAAGAGCCAA+TGG - Chr1:66826466-66826485 MsG0180003697.01.T01:CDS 45.0%
TTGCAACCTTTGGTAGATGG+TGG - Chr1:66824379-66824398 MsG0180003697.01.T01:intron 45.0%
! ACAAGATGTGACCTTGGTGT+GGG - Chr1:66824084-66824103 MsG0180003697.01.T01:intron 45.0%
! AGCTTATCGCGGTCTTTTGA+TGG - Chr1:66826439-66826458 MsG0180003697.01.T01:CDS 45.0%
! GATTTTGTGGTTGCTGGATC+AGG - Chr1:66824861-66824880 MsG0180003697.01.T01:intron 45.0%
! GGGTGATGAAACACCTTTTG+TGG + Chr1:66824168-66824187 None:intergenic 45.0%
! TATCCTCTATCTCGCCGTTT+TGG - Chr1:66824318-66824337 MsG0180003697.01.T01:intron 45.0%
!! GAACATGGATTGGCTAAGAG+AGG - Chr1:66826377-66826396 MsG0180003697.01.T01:intron 45.0%
!! GCTTTTAATTGCGCAGGTGA+AGG - Chr1:66826568-66826587 MsG0180003697.01.T01:CDS 45.0%
!! GTTGTTATTTGGAGAGGAGG+AGG + Chr1:66825934-66825953 None:intergenic 45.0%
!! TTTTTCGACGCCATGTGGAT+GGG - Chr1:66824344-66824363 MsG0180003697.01.T01:intron 45.0%
!!! CGGTCTTTTGATGGCGAATT+CGG - Chr1:66826448-66826467 MsG0180003697.01.T01:CDS 45.0%
!!! TCAGAACAGGGGTTTTAGCT+AGG - Chr1:66825744-66825763 MsG0180003697.01.T01:intron 45.0%
!!! TGATAATTTTTCGGGTCCGG+TGG + Chr1:66826156-66826175 None:intergenic 45.0%
!!! TGGCGGGGTTTTGTTGAAAA+CGG + Chr1:66826082-66826101 None:intergenic 45.0%
!!! TTTTTTCGACGCCATGTGGA+TGG - Chr1:66824343-66824362 MsG0180003697.01.T01:intron 45.0%
!!! TATATATCAATTAATTTTTT+AGG - Chr1:66822710-66822729 MsG0180003697.01.T01:CDS 5.0%
AATTGCGCAGGTGAAGGTGA+TGG - Chr1:66826574-66826593 MsG0180003697.01.T01:CDS 50.0%
ACGCAGGTGGCCAAAAAAAC+AGG + Chr1:66824138-66824157 None:intergenic 50.0%
AGAGAATGAGTGAGAGGGGA+AGG + Chr1:66825877-66825896 None:intergenic 50.0%
AGCACAATATATGCAGCGGC+CGG + Chr1:66825169-66825188 None:intergenic 50.0%
AGTCCAAAACGGCGAGATAG+AGG + Chr1:66824324-66824343 None:intergenic 50.0%
ATAGACATAGCAATGGGGCG+GGG + Chr1:66823618-66823637 None:intergenic 50.0%
ATCCCCGTTGGATATGGGTA+GGG - Chr1:66823534-66823553 MsG0180003697.01.T01:intron 50.0%
ATGAGAGTAGGGTATGGGGA+CGG - Chr1:66823571-66823590 MsG0180003697.01.T01:intron 50.0%
ATGGGTGCAATTGTCAGGGT+CGG - Chr1:66822740-66822759 MsG0180003697.01.T01:CDS 50.0%
CAGGTGGCCAAAAAAACAGG+TGG + Chr1:66824135-66824154 None:intergenic 50.0%
CCGAAGTGCATTTGCATCGT+TGG + Chr1:66826225-66826244 None:intergenic 50.0%
CGAAGAGAGGTGAGGTAAAG+GGG + Chr1:66826016-66826035 None:intergenic 50.0%
CGATAGACATAGCAATGGGG+CGG + Chr1:66823620-66823639 None:intergenic 50.0%
CTCTCATCCCCGTTGGATAT+GGG - Chr1:66823529-66823548 MsG0180003697.01.T01:intron 50.0%
GAAGTTTCTCTCATCCCCGT+TGG - Chr1:66823522-66823541 MsG0180003697.01.T01:intron 50.0%
GAGAGGGGAAGGAGAGTTTA+GGG + Chr1:66825866-66825885 None:intergenic 50.0%
GAGGTGAGGTAAAGGGGTTA+AGG + Chr1:66826010-66826029 None:intergenic 50.0%
GATAGACATAGCAATGGGGC+GGG + Chr1:66823619-66823638 None:intergenic 50.0%
GGAGTTGAAAGAGCCAATGG+AGG - Chr1:66826469-66826488 MsG0180003697.01.T01:CDS 50.0%
GGTCGGGCCAATCAAAGATA+AGG - Chr1:66822757-66822776 MsG0180003697.01.T01:CDS 50.0%
GGTGAAAACGACACCGTTAG+AGG - Chr1:66825547-66825566 MsG0180003697.01.T01:intron 50.0%
TACCCTACCCATATCCAACG+GGG + Chr1:66823539-66823558 None:intergenic 50.0%
TCTCTCATCCCCGTTGGATA+TGG - Chr1:66823528-66823547 MsG0180003697.01.T01:intron 50.0%
TGAGAGGGGAAGGAGAGTTT+AGG + Chr1:66825867-66825886 None:intergenic 50.0%
TGCACTTCGGTCTTTGGTTG+AGG - Chr1:66826235-66826254 MsG0180003697.01.T01:intron 50.0%
TGTGGAGAGTCTCGATGTAC+AGG + Chr1:66823651-66823670 None:intergenic 50.0%
! AAGATCTGAGGTTCCAACCC+CGG + Chr1:66825597-66825616 None:intergenic 50.0%
! AAGGTGTTTCATCACCCTCG+CGG - Chr1:66824171-66824190 MsG0180003697.01.T01:intron 50.0%
! AGAGGAGGAGGCTTTGATAG+AGG + Chr1:66825922-66825941 None:intergenic 50.0%
! GAGGAGGAGGCTTTGATAGA+GGG + Chr1:66825921-66825940 None:intergenic 50.0%
! GGGTGCATTGAAGGTGTATG+AGG - Chr1:66826610-66826629 MsG0180003697.01.T01:CDS 50.0%
! GTGTTGTTCGCCGTATTGTG+CGG + Chr1:66823426-66823445 None:intergenic 50.0%
! TGCTTCTAGCTGGTTCCAGT+TGG - Chr1:66824232-66824251 MsG0180003697.01.T01:intron 50.0%
! TGGTGATGAACGACTCCAAC+TGG + Chr1:66824250-66824269 None:intergenic 50.0%
!! ATTGTGCTGGTGGTGGTGAT+GGG + Chr1:66826121-66826140 None:intergenic 50.0%
!!! GGACTTTTTTCGACGCCATG+TGG - Chr1:66824339-66824358 MsG0180003697.01.T01:intron 50.0%
!!! TAATTTTTCGGGTCCGGTGG+TGG + Chr1:66826153-66826172 None:intergenic 50.0%
AGCAGGTTCGAAGAGAGGTG+AGG + Chr1:66826024-66826043 None:intergenic 55.0%
AGGTGTTTCATCACCCTCGC+GGG - Chr1:66824172-66824191 MsG0180003697.01.T01:intron 55.0%
AGTGGCGGTGAGTGAAAGAG+AGG + Chr1:66825836-66825855 None:intergenic 55.0%
CACAATATATGCAGCGGCCG+GGG + Chr1:66825167-66825186 None:intergenic 55.0%
CATCCCCGTTGGATATGGGT+AGG - Chr1:66823533-66823552 MsG0180003697.01.T01:intron 55.0%
CTACTCTTTGGCGGTGTCCT+TGG + Chr1:66822444-66822463 None:intergenic 55.0%
CTGCGTTTAGCCGCCACAAA+AGG - Chr1:66824152-66824171 MsG0180003697.01.T01:intron 55.0%
GCACAATATATGCAGCGGCC+GGG + Chr1:66825168-66825187 None:intergenic 55.0%
GGAGAGTCTCGATGTACAGG+AGG + Chr1:66823648-66823667 None:intergenic 55.0%
GGGGGAGAGATGTCAACCAT+TGG - Chr1:66822365-66822384 MsG0180003697.01.T01:CDS 55.0%
TGAGAGTAGGGTATGGGGAC+GGG - Chr1:66823572-66823591 MsG0180003697.01.T01:intron 55.0%
TGGGTGCAATTGTCAGGGTC+GGG - Chr1:66822741-66822760 MsG0180003697.01.T01:CDS 55.0%
! ACGAATAAGTGGGGTGTCCG+AGG - Chr1:66825135-66825154 MsG0180003697.01.T01:intron 55.0%
! AGATGTGACCTTGGTGTGGG+TGG - Chr1:66824087-66824106 MsG0180003697.01.T01:intron 55.0%
! CTTTTGTGGCGGCTAAACGC+AGG + Chr1:66824154-66824173 None:intergenic 55.0%
!! GATTGTGCTGGTGGTGGTGA+TGG + Chr1:66826122-66826141 None:intergenic 55.0%
!! GCAGGTGAAGGTGATGGAAG+AGG - Chr1:66826580-66826599 MsG0180003697.01.T01:CDS 55.0%
AAGCAACCCTTCAACCCGCG+AGG + Chr1:66824189-66824208 None:intergenic 60.0%
ACATAGCAATGGGGCGGGGT+GGG + Chr1:66823614-66823633 None:intergenic 60.0%
ACATCGCACCACCCACACCA+AGG + Chr1:66824098-66824117 None:intergenic 60.0%
AGCAACCCTTCAACCCGCGA+GGG + Chr1:66824188-66824207 None:intergenic 60.0%
CAATCCTCCACCACCACCAC+CGG - Chr1:66826137-66826156 MsG0180003697.01.T01:intron 60.0%
CTCTTTGGCGGTGTCCTTGG+TGG + Chr1:66822441-66822460 None:intergenic 60.0%
GAGAGTAGGGTATGGGGACG+GGG - Chr1:66823573-66823592 MsG0180003697.01.T01:intron 60.0%
GGCGGTGAGTGAAAGAGAGG+TGG + Chr1:66825833-66825852 None:intergenic 60.0%
GGTGTCCGAGGTTCAAACCC+CGG - Chr1:66825147-66825166 MsG0180003697.01.T01:intron 60.0%
TGATGGGAGTGGTGACCTGG+CGG + Chr1:66826105-66826124 None:intergenic 60.0%
TTGTGGCGGCTAAACGCAGG+TGG + Chr1:66824151-66824170 None:intergenic 60.0%
! CATCACCCTCGCGGGTTGAA+GGG - Chr1:66824180-66824199 MsG0180003697.01.T01:intron 60.0%
! GACGCCATGTGGATGGGTTC+TGG - Chr1:66824350-66824369 MsG0180003697.01.T01:intron 60.0%
! GTGGAGGATTGTGCTGGTGG+TGG + Chr1:66826128-66826147 None:intergenic 60.0%
! GTGGTGGAGGATTGTGCTGG+TGG + Chr1:66826131-66826150 None:intergenic 60.0%
! TCATCACCCTCGCGGGTTGA+AGG - Chr1:66824179-66824198 MsG0180003697.01.T01:intron 60.0%
!! GTGGTGGTGGAGGATTGTGC+TGG + Chr1:66826134-66826153 None:intergenic 60.0%
!! TGGTGATGGGAGTGGTGACC+TGG + Chr1:66826108-66826127 None:intergenic 60.0%
!!! TTTTTCGGGTCCGGTGGTGG+TGG + Chr1:66826150-66826169 None:intergenic 60.0%
AACAAAACCCCGCCACCGCC+AGG - Chr1:66826087-66826106 MsG0180003697.01.T01:intron 65.0%
AGCGGCCGGGGTTTGAACCT+CGG + Chr1:66825155-66825174 None:intergenic 65.0%
CATAGCAATGGGGCGGGGTG+GGG + Chr1:66823613-66823632 None:intergenic 65.0%
GACATAGCAATGGGGCGGGG+TGG + Chr1:66823615-66823634 None:intergenic 65.0%
GTAGGGTATGGGGACGGGGA+AGG - Chr1:66823577-66823596 MsG0180003697.01.T01:intron 65.0%
!! GCTGGTGGTGGTGATGGGAG+TGG + Chr1:66826116-66826135 None:intergenic 65.0%
AGTGGTGACCTGGCGGTGGC+GGG + Chr1:66826098-66826117 None:intergenic 70.0%
GAGTGGTGACCTGGCGGTGG+CGG + Chr1:66826099-66826118 None:intergenic 70.0%
TGGGAGTGGTGACCTGGCGG+TGG + Chr1:66826102-66826121 None:intergenic 70.0%
!! TTCGGGTCCGGTGGTGGTGG+TGG + Chr1:66826147-66826166 None:intergenic 70.0%
CAATGGGGCGGGGTGGGGAC+GGG + Chr1:66823608-66823627 None:intergenic 75.0%
GCAATGGGGCGGGGTGGGGA+CGG + Chr1:66823609-66823628 None:intergenic 75.0%
GTGGTGACCTGGCGGTGGCG+GGG + Chr1:66826097-66826116 None:intergenic 75.0%
!! GGGTCCGGTGGTGGTGGTGG+AGG + Chr1:66826144-66826163 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 66822045 66826847 66822045 ID=MsG0180003697.01;Name=MsG0180003697.01
Chr1 mRNA 66822045 66826847 66822045 ID=MsG0180003697.01.T01;Parent=MsG0180003697.01;Name=MsG0180003697.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|0|0|2|0|409
Chr1 exon 66826412 66826847 66826412 ID=MsG0180003697.01.T01:exon:51489;Parent=MsG0180003697.01.T01
Chr1 exon 66822045 66822838 66822045 ID=MsG0180003697.01.T01:exon:51488;Parent=MsG0180003697.01.T01
Chr1 CDS 66826412 66826847 66826412 ID=MsG0180003697.01.T01:cds;Parent=MsG0180003697.01.T01
Chr1 CDS 66822045 66822838 66822045 ID=MsG0180003697.01.T01:cds;Parent=MsG0180003697.01.T01
Gene Sequence

>MsG0180003697.01.T01

ATGGATGGTTTGAGTCAATTCGGAGACCATCCTTACACACCAACAATTTCCAACAACATCATTTGTCTTTGTCCAAATCATGAACCTAATCAAATAGTTTCTCCAATGCCATCACATACCAATACCCCAAAGAATATTAATGCTACGACCAACAAGGAAATTACCTCGTGTACTATTTGCTTCAAAAGAAAGCAGCGAGAGGAGTTACAAACTAACTCAAAGAATGTCATCAAGAAAATCTACAAAGCAATCCATTCCCAGCTTTTCAAAATGAAAAAGCAAGAAGATGATGAATGCTTGTGGAAGAAGACCATATTGATGGGGGAGAGATGTCAACCATTGGTATTTTCAGGTGCAATTTATTATGATAGTGAAGGGAATCAGATTTCTGAGCCACCAAGGACACCGCCAAAGAGTAGTCCTTTAAGTTCATTTATAGCACTTCTCGCTTTCTTCTTATTCCGTTTTCAACAAAACCCCGCCACCGCCAGGTCACCACTCCCATCACCACCACCAGCACAATCCTCCACCACCACCACCGGACCCGAAAAATTATCAAATAAAGAAAACAACACTACAATTGATGACAAACTGATCAAAAATTCCAACGATGCAAATGCACTTCGGTCTTTGGTTGAGGAAAACGTGAAAGCATGCAAACTAAGCGAAGCTATTCGTGTTGTGGAACGATTAATTGAACTCGAACCGGAAGAATTTGATTTGTTGCTACTAAAATCACATTTGCACATTCATAACGGTGAACATGGATTGGCTAAGAGAGGATTTGAGTTTACTCTGCAGCAAGATCCGTTTAACTCGGAAGCTTATCGCGGTCTTTTGATGGCGAATTCGGAGTTGAAAGAGCCAATGGAGGGTTTTTTGAATAGGGTTGATGAGGTAGTGAAGTTTTTTGAAGAGAAAAAAATGGAGTCAGAAGCTAGGGAATTTAAGCTTTTAATTGCGCAGGTGAAGGTGATGGAAGAGGATTATTTGGGTGCATTGAAGGTGTATGAGGAAATTGTGAAGGAAGAACCGAGTGATTTTAGACCTTATTTGTGTCAGGGTGTTGTTTATAGTTTGCTTAGGAAGAATGATGAAGCTCAGAAACAGTTTGAGGAGTATAGAAGACTTGTTCCGGAGAGTCATCCTTATAAAGATTATTTTGAGGATAACGCCAAGGTTTTGTCGAAGAAGCTAGAGAAAGGAGGAATAGAAGAAGCAAAGATTTGA

Protein sequence

>MsG0180003697.01.T01

MDGLSQFGDHPYTPTISNNIICLCPNHEPNQIVSPMPSHTNTPKNINATTNKEITSCTICFKRKQREELQTNSKNVIKKIYKAIHSQLFKMKKQEDDECLWKKTILMGERCQPLVFSGAIYYDSEGNQISEPPRTPPKSSPLSSFIALLAFFLFRFQQNPATARSPLPSPPPAQSSTTTTGPEKLSNKENNTTIDDKLIKNSNDANALRSLVEENVKACKLSEAIRVVERLIELEPEEFDLLLLKSHLHIHNGEHGLAKRGFEFTLQQDPFNSEAYRGLLMANSELKEPMEGFLNRVDEVVKFFEEKKMESEAREFKLLIAQVKVMEEDYLGALKVYEEIVKEEPSDFRPYLCQGVVYSLLRKNDEAQKQFEEYRRLVPESHPYKDYFEDNAKVLSKKLEKGGIEEAKI*