AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023747.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023747.01.T01 MTR_2g014490 41.667 120 47 2 140 236 575 694 1.37e-21 95.5
MsG0480023747.01.T01 MTR_2g014490 42.241 116 44 2 144 236 591 706 3.56e-21 94.4
MsG0480023747.01.T01 MTR_4g088375 41.525 118 46 2 140 234 487 604 2.09e-20 92.0
MsG0480023747.01.T01 MTR_4g088375 41.525 118 46 2 140 234 521 638 2.15e-20 92.0
MsG0480023747.01.T01 MTR_4g088375 41.525 118 46 2 140 234 487 604 2.17e-20 92.0
MsG0480023747.01.T01 MTR_4g088375 41.525 118 46 2 140 234 268 385 2.22e-20 92.0
MsG0480023747.01.T01 MTR_4g078860 38.931 131 55 3 129 234 513 643 2.78e-20 91.7
MsG0480023747.01.T01 MTR_4g078860 38.931 131 55 3 129 234 539 669 3.11e-20 91.7
MsG0480023747.01.T01 MTR_4g078860 38.931 131 55 3 129 234 539 669 4.29e-20 91.3
MsG0480023747.01.T01 MTR_4g078860 38.931 131 55 3 129 234 539 669 4.59e-20 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023747.01.T01 AT4G12750 40.891 247 116 4 47 268 259 500 1.34e-40 150
MsG0480023747.01.T01 AT1G28420 41.176 119 47 2 141 236 555 673 5.88e-23 99.8
MsG0480023747.01.T01 AT5G44180 31.034 232 115 7 47 236 410 638 6.36e-21 93.6
MsG0480023747.01.T01 AT5G44180 31.034 232 115 7 47 236 410 638 6.79e-21 93.6
MsG0480023747.01.T01 AT5G44180 31.034 232 115 7 47 236 410 638 6.79e-21 93.6

Find 84 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTTGATGAGTTTGTTC+AGG 0.254312 4:+89361115 MsG0480023747.01.T01:CDS
TTATTTCTTATTTCCTGTTT+CGG 0.261211 4:-89359093 None:intergenic
CCTGATGTAGCTTTCTTATT+CGG 0.278968 4:-89359120 None:intergenic
GGTGCTTTCATATTACAATT+AGG 0.290699 4:-89358710 None:intergenic
GGTGCTTTGATCTTACAATT+AGG 0.301301 4:-89358644 None:intergenic
TTGGATATTCTTGTAAACTA+TGG 0.315501 4:+89363125 MsG0480023747.01.T01:CDS
TGCTATCATGTTTCCTCTAT+CGG 0.361697 4:+89360455 MsG0480023747.01.T01:CDS
ATTGAAGTGGAGCTTTCTAA+TGG 0.363027 4:+89361315 MsG0480023747.01.T01:CDS
AACTCGCACTTCAAGGTTCC+AGG 0.363354 4:-89363155 None:intergenic
TTTCAGGACTCGATGTTACT+TGG 0.367636 4:+89361252 MsG0480023747.01.T01:intron
TACAATTAGGATTTGTTGCC+AGG 0.370600 4:-89358631 None:intergenic
CAGCATATGTATAGATGAAA+TGG 0.370973 4:-89361070 None:intergenic
TGATACCGTCTTAGAATTTG+TGG 0.372338 4:-89360405 None:intergenic
TTTAAACAACTCGCACTTCA+AGG 0.399023 4:-89363162 None:intergenic
GTGCTGGTAGCTGCTGGATT+CGG 0.400106 4:+89361557 MsG0480023747.01.T01:CDS
GATCTCTAAATCCTCTTACT+TGG 0.400973 4:+89361516 MsG0480023747.01.T01:CDS
CACTCTAGATGTTCTGTCTT+GGG 0.412167 4:+89360491 MsG0480023747.01.T01:CDS
CTCTAGTTCCTCCGTTGTGC+TGG 0.414272 4:-89363325 None:intergenic
TCTTTGAAAGGCACCTTGCT+TGG 0.419479 4:-89361582 None:intergenic
CTGAACAGGAAAGCCGAAAC+AGG 0.429299 4:+89359080 MsG0480023747.01.T01:intron
CGTCAAGTGCTGGTAGCTGC+TGG 0.431345 4:+89361551 MsG0480023747.01.T01:CDS
GAAAGCTACATCAGGGGAAA+AGG 0.439714 4:+89359128 MsG0480023747.01.T01:CDS
TGGTGGTATGGGCAAAGGTC+TGG 0.442772 4:+89358679 MsG0480023747.01.T01:CDS
CCGAATAAGAAAGCTACATC+AGG 0.446319 4:+89359120 MsG0480023747.01.T01:CDS
TTGAAGTGGAGCTTTCTAAT+GGG 0.448266 4:+89361316 MsG0480023747.01.T01:CDS
CCGTCTTAGAATTTGTGGTT+AGG 0.451741 4:-89360400 None:intergenic
ACACTCTAGATGTTCTGTCT+TGG 0.452628 4:+89360490 MsG0480023747.01.T01:CDS
GCAGGTAGCCCAACGGATCT+TGG 0.455178 4:-89360435 None:intergenic
ACATGGTATGGGCAAAGGCC+TGG 0.482423 4:+89358613 None:intergenic
CTTGCTGCCAATGGAATGCT+TGG 0.484860 4:+89359434 MsG0480023747.01.T01:CDS
GCTATCATGTTTCCTCTATC+GGG 0.485051 4:+89360456 MsG0480023747.01.T01:CDS
ATCTGAACAGATAAGCAGAT+TGG 0.486807 4:-89359408 None:intergenic
GCTGCCAATGGAATGCTTGG+TGG 0.493534 4:+89359437 MsG0480023747.01.T01:CDS
AGTATCTCAATCCAAGTAAG+AGG 0.493928 4:-89361527 None:intergenic
GTTCCTCCGTTGTGCTGGAA+AGG 0.494796 4:-89363320 None:intergenic
GTAAACTATGGCCTATGCCC+TGG 0.495245 4:+89363137 MsG0480023747.01.T01:CDS
TTGTTTGAAGTACCTTGCCA+AGG 0.500660 4:-89361610 None:intergenic
TGAGCTGAGTGGCCCGATAG+AGG 0.501111 4:-89360468 None:intergenic
AAGAATACTCTGTTGATGCT+TGG 0.504490 4:+89361489 MsG0480023747.01.T01:CDS
CTTGGTGGCTCACTTTGTCC+AGG 0.506367 4:+89359452 MsG0480023747.01.T01:CDS
AGATAGAAGCAGTGTGAGAA+GGG 0.510823 4:-89361289 None:intergenic
CAGCAGCTACCAGCACTTGA+CGG 0.519244 4:-89361550 None:intergenic
AGTAATATCACTTGAAAGTG+TGG 0.519490 4:-89363358 None:intergenic
GCCAAGGCCCTCTCTTTGAA+AGG 0.519811 4:-89361594 None:intergenic
AAGCCTGAACAAACTCATCA+AGG 0.520032 4:-89361118 None:intergenic
TGTGAAGAGACATGGTGGTA+TGG 0.522781 4:+89358667 MsG0480023747.01.T01:CDS
TCAGATCAACTTGCTGCCAA+TGG 0.522914 4:+89359425 MsG0480023747.01.T01:CDS
CAGATAGAAGCAGTGTGAGA+AGG 0.525187 4:-89361290 None:intergenic
CAGAGCCTACCAAGATCCGT+TGG 0.525236 4:+89360426 MsG0480023747.01.T01:CDS
TGAGATACTCCGTCAAGTGC+TGG 0.529972 4:+89361541 MsG0480023747.01.T01:CDS
ATACCATGTCTGTCTTTCAC+AGG 0.539826 4:-89358731 None:intergenic
GCCTTTCAAAGAGAGGGCCT+TGG 0.540433 4:+89361593 MsG0480023747.01.T01:CDS
GTGAAGAGACATGGTGGTAT+GGG 0.559904 4:+89358668 MsG0480023747.01.T01:CDS
TTGTCAGAACGAGGCAACAA+TGG 0.560653 4:+89363187 MsG0480023747.01.T01:CDS
AACAAACTCATCAAGGGTGA+AGG 0.565704 4:-89361111 None:intergenic
GCTGGATTCGGTTCCAAGCA+AGG 0.566700 4:+89361569 MsG0480023747.01.T01:CDS
ATACCACCATGTCTCTTCAC+AGG 0.569156 4:-89358665 None:intergenic
GATAGAGGAAACATGATAGC+AGG 0.574024 4:-89360453 None:intergenic
GCTTCTATCTGACATTGAAG+TGG 0.574080 4:+89361302 MsG0480023747.01.T01:CDS
AGAGCCTACCAAGATCCGTT+GGG 0.574170 4:+89360427 MsG0480023747.01.T01:CDS
TGAGCCACCAAGCATTCCAT+TGG 0.574961 4:-89359441 None:intergenic
GAGAGACATGGTATGGGCAA+AGG 0.578738 4:+89358608 None:intergenic
TCAAAGAGAGGGCCTTGGCA+AGG 0.585213 4:+89361598 MsG0480023747.01.T01:CDS
CGAATAAGAAAGCTACATCA+GGG 0.594663 4:+89359121 MsG0480023747.01.T01:CDS
AGCCTGAACAAACTCATCAA+GGG 0.599006 4:-89361117 None:intergenic
GAGCTGAGAGAGATACAAGA+AGG 0.599309 4:+89359383 MsG0480023747.01.T01:CDS
AGACATGGTGGTATGGGCAA+AGG 0.600015 4:+89358674 MsG0480023747.01.T01:CDS
ACTTCAAGGTTCCAGGGCAT+AGG 0.601780 4:-89363148 None:intergenic
GTAGCCCAACGGATCTTGGT+AGG 0.602402 4:-89360431 None:intergenic
GTTTAAATCTTGTCAGAACG+AGG 0.608400 4:+89363178 MsG0480023747.01.T01:CDS
CAAGGTGCCTTTCAAAGAGA+GGG 0.609129 4:+89361587 MsG0480023747.01.T01:CDS
ACAAACTCATCAAGGGTGAA+GGG 0.620929 4:-89361110 None:intergenic
GCAAGGTGCCTTTCAAAGAG+AGG 0.621733 4:+89361586 MsG0480023747.01.T01:CDS
CCTAACCACAAATTCTAAGA+CGG 0.624481 4:+89360400 MsG0480023747.01.T01:CDS
ACTCGCACTTCAAGGTTCCA+GGG 0.651902 4:-89363154 None:intergenic
AAACCTTTCCAGCACAACGG+AGG 0.657818 4:+89363317 MsG0480023747.01.T01:CDS
ATTAAACCTTTCCAGCACAA+CGG 0.658154 4:+89363314 MsG0480023747.01.T01:CDS
AAAGCACCTGTGAAGAGACA+TGG 0.668840 4:+89358659 MsG0480023747.01.T01:CDS
CATGATAGCAGGTAGCCCAA+CGG 0.678732 4:-89360442 None:intergenic
CATCTAGAGTGTGAGCTGAG+TGG 0.699960 4:-89360479 None:intergenic
GAATAAGAAAGCTACATCAG+GGG 0.707390 4:+89359122 MsG0480023747.01.T01:CDS
GTTACTTGGACAAATTCACG+TGG 0.729846 4:+89361266 MsG0480023747.01.T01:CDS
GCACCTGTGAAGAGACATGG+TGG 0.741747 4:+89358662 MsG0480023747.01.T01:CDS
GCACCTGTGAAAGACAGACA+TGG 0.744683 4:+89358728 MsG0480023747.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTTTAAAAGAATATAA+AGG - Chr4:89360997-89361016 None:intergenic 10.0%
!!! ATTAGTTTATAGTATAATAA+AGG + Chr4:89359851-89359870 MsG0480023747.01.T01:intron 10.0%
!!! TTTTTTAAAAGTGATTTTTT+TGG - Chr4:89362451-89362470 None:intergenic 10.0%
!! TAAAACAAAATATAAAACGT+GGG + Chr4:89360813-89360832 MsG0480023747.01.T01:intron 15.0%
!! TTAACAATCTATATATTTGA+AGG + Chr4:89361457-89361476 MsG0480023747.01.T01:intron 15.0%
!!! TAAAAACATCTAAAACAAAT+GGG + Chr4:89362669-89362688 MsG0480023747.01.T01:intron 15.0%
!!! TATGTTTATATATTTTTGTG+CGG + Chr4:89361821-89361840 MsG0480023747.01.T01:intron 15.0%
!!! TATTTTGATTTGATGAATTT+AGG + Chr4:89363256-89363275 MsG0480023747.01.T01:intron 15.0%
!!! TCTTTTAAAACATTTTTCAA+TGG + Chr4:89361003-89361022 MsG0480023747.01.T01:intron 15.0%
!!! TGTGTTTTTTTGTTTTAATT+AGG + Chr4:89363100-89363119 MsG0480023747.01.T01:intron 15.0%
!!! TTTTTGTTTTAATTAGGAAT+TGG + Chr4:89363106-89363125 MsG0480023747.01.T01:intron 15.0%
!! AATCAGTTAATGTATAGATA+TGG - Chr4:89362889-89362908 None:intergenic 20.0%
!! ACTAAATATCTGCTAATAAA+AGG - Chr4:89361400-89361419 None:intergenic 20.0%
!! ATCAGTTAATGTATAGATAT+GGG - Chr4:89362888-89362907 None:intergenic 20.0%
!! CATTCATTAAATGATGTATT+TGG - Chr4:89361712-89361693 None:intergenic 20.0%
!! GTAAAACAAAATATAAAACG+TGG + Chr4:89360812-89360831 MsG0480023747.01.T01:intron 20.0%
!! GTATTGCAATATAGAAAAAT+TGG - Chr4:89362317-89362336 None:intergenic 20.0%
!! TACACACATAAATGTATTAT+AGG - Chr4:89359023-89359042 None:intergenic 20.0%
!! TATTATGTTCTAATGATTGT+TGG + Chr4:89359596-89359615 MsG0480023747.01.T01:intron 20.0%
!! TGGTGAAGAATTATTTATTA+AGG + Chr4:89359744-89359763 MsG0480023747.01.T01:intron 20.0%
!!! AAAAACATCTAAAACAAATG+GGG + Chr4:89362670-89362689 MsG0480023747.01.T01:intron 20.0%
!!! AATCTATTTTTTTAGACACA+AGG - Chr4:89362508-89362527 None:intergenic 20.0%
!!! ATATTTTCCATTTCAAAGAA+GGG + Chr4:89362122-89362141 MsG0480023747.01.T01:intron 20.0%
!!! ATTTTTCTATATTGCAATAC+AGG + Chr4:89362317-89362336 MsG0480023747.01.T01:intron 20.0%
!!! CATTTGTTTTAGATGTTTTT+AGG - Chr4:89362670-89362689 None:intergenic 20.0%
!!! CTAAAAACATCTAAAACAAA+TGG + Chr4:89362668-89362687 MsG0480023747.01.T01:intron 20.0%
!!! GTTTTTTATTTAGTTCTTAC+TGG + Chr4:89361194-89361213 MsG0480023747.01.T01:intron 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG + Chr4:89361668-89361687 MsG0480023747.01.T01:intron 20.0%
!!! TAAGCAAAAATCAACTTTTT+AGG - Chr4:89361687-89361668 None:intergenic 20.0%
!!! TGTTAATAATATTTGCGTTT+TGG + Chr4:89362813-89362832 MsG0480023747.01.T01:intron 20.0%
!!! TTATTTCTTATTTCCTGTTT+CGG - Chr4:89359096-89359115 None:intergenic 20.0%
!!! TTTTTCTATATTGCAATACA+GGG + Chr4:89362318-89362337 MsG0480023747.01.T01:intron 20.0%
! ACACATAAATGTATTATAGG+AGG - Chr4:89359020-89359039 None:intergenic 25.0%
! ACATTTCGTGAAAAAAATAG+TGG + Chr4:89359153-89359172 MsG0480023747.01.T01:CDS 25.0%
! AGATTTAGAGGTTAATGATT+TGG + Chr4:89360198-89360217 MsG0480023747.01.T01:intron 25.0%
! ATTAAATGTGTAAAGATGCT+TGG + Chr4:89362994-89363013 MsG0480023747.01.T01:intron 25.0%
! GTTCTATCATAAACCATATT+TGG - Chr4:89360226-89360245 None:intergenic 25.0%
! TAAGTTGTTTAAGTATGATG+TGG + Chr4:89360873-89360892 MsG0480023747.01.T01:intron 25.0%
! TAATACTAAAACACCGATAT+CGG + Chr4:89358921-89358940 MsG0480023747.01.T01:intron 25.0%
! TGTTGAATTAGAACAAAGAA+TGG + Chr4:89359823-89359842 MsG0480023747.01.T01:intron 25.0%
! TTCAATAATTGAGCTGATTA+TGG - Chr4:89362696-89362715 None:intergenic 25.0%
! TTGGATATTCTTGTAAACTA+TGG + Chr4:89363125-89363144 MsG0480023747.01.T01:CDS 25.0%
! TTTCCACTTTCAAATTCAAT+TGG + Chr4:89363056-89363075 MsG0480023747.01.T01:intron 25.0%
!! AACAAGTTCACATTTTTCTA+TGG - Chr4:89359296-89359315 None:intergenic 25.0%
!! ACAAGTTCACATTTTTCTAT+GGG - Chr4:89359295-89359314 None:intergenic 25.0%
!! GATATTTTCCATTTCAAAGA+AGG + Chr4:89362121-89362140 MsG0480023747.01.T01:intron 25.0%
!! TAATAATATTTGCGTTTTGG+TGG + Chr4:89362816-89362835 MsG0480023747.01.T01:intron 25.0%
!! TAATGATTTGGATCCAAATA+TGG + Chr4:89360210-89360229 MsG0480023747.01.T01:intron 25.0%
!! TATTTTCCATTTCAAAGAAG+GGG + Chr4:89362123-89362142 MsG0480023747.01.T01:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + Chr4:89361767-89361786 MsG0480023747.01.T01:intron 25.0%
!!! ACTTGAAAGATCTGTTTTTT+TGG + Chr4:89359787-89359806 MsG0480023747.01.T01:intron 25.0%
!!! CTCTAAAATGAAAAGCTATT+AGG - Chr4:89362546-89362565 None:intergenic 25.0%
!!! TTGCATGACTTATTTTTAAG+AGG - Chr4:89361347-89361366 None:intergenic 25.0%
!!! TTTATTGAAGGTACTACTAT+GGG - Chr4:89362217-89362236 None:intergenic 25.0%
!!! TTTTGATTCTATGTAGATTG+CGG + Chr4:89363290-89363309 MsG0480023747.01.T01:intron 25.0%
AAAGACCTAGAAAAACTATC+AGG + Chr4:89360173-89360192 MsG0480023747.01.T01:intron 30.0%
AAATAATTCTTCACCAGTTC+CGG - Chr4:89359740-89359759 None:intergenic 30.0%
AAATGTTCTGATTCTTGCAA+AGG - Chr4:89362087-89362106 None:intergenic 30.0%
AACTATCAGGAAAGATTTAG+AGG + Chr4:89360186-89360205 MsG0480023747.01.T01:intron 30.0%
AAGCCAATTGAATTTGAAAG+TGG - Chr4:89363062-89363081 None:intergenic 30.0%
AATATATAAAGTACACCCTC+CGG - Chr4:89361789-89361808 None:intergenic 30.0%
AATGTTCTGATTCTTGCAAA+GGG - Chr4:89362086-89362105 None:intergenic 30.0%
ATCACAGAAGAAAATACTTC+TGG - Chr4:89362186-89362205 None:intergenic 30.0%
CAGCATATGTATAGATGAAA+TGG - Chr4:89361073-89361092 None:intergenic 30.0%
CAGCTCAATTATTGAAAACA+CGG + Chr4:89362700-89362719 MsG0480023747.01.T01:intron 30.0%
CATTCTCAATGATCAAAACA+CGG + Chr4:89362755-89362774 MsG0480023747.01.T01:intron 30.0%
CTGACAATGTGTTTATAAGT+GGG + Chr4:89360337-89360356 MsG0480023747.01.T01:intron 30.0%
GAAAAGGTCTAATGACAATT+TGG + Chr4:89358823-89358842 MsG0480023747.01.T01:intron 30.0%
GAGGGGGTAATATATAAAAT+GGG - Chr4:89361637-89361656 None:intergenic 30.0%
GAGTCCTTCAAAATAATCAT+TGG + Chr4:89360938-89360957 MsG0480023747.01.T01:intron 30.0%
GGTGCTTTCATATTACAATT+AGG - Chr4:89358713-89358732 None:intergenic 30.0%
GGTGCTTTCATATTACTATT+AGG - Chr4:89358781-89358800 None:intergenic 30.0%
GTCATAACAATAAATCATGC+AGG - Chr4:89359971-89359990 None:intergenic 30.0%
GTTAATGTATAGATATGGGA+CGG - Chr4:89362884-89362903 None:intergenic 30.0%
GTTTAGATAACTTACATTCG+TGG - Chr4:89358971-89358990 None:intergenic 30.0%
TAACATCCAAAATTCCTTTC+AGG + Chr4:89361236-89361255 MsG0480023747.01.T01:intron 30.0%
TAATATGTCATCTTTGACTC+AGG + Chr4:89361153-89361172 MsG0480023747.01.T01:intron 30.0%
TACTCTTATATCACATTGTC+AGG - Chr4:89360561-89360580 None:intergenic 30.0%
TGACAATGTGTTTATAAGTG+GGG + Chr4:89360338-89360357 MsG0480023747.01.T01:intron 30.0%
TGATCATTGAGAATGTTCAA+AGG - Chr4:89362750-89362769 None:intergenic 30.0%
TGCTAATAAAAGGTTACTCA+CGG - Chr4:89361390-89361409 None:intergenic 30.0%
TGTTCTAATGATTGTTGGAA+TGG + Chr4:89359601-89359620 MsG0480023747.01.T01:intron 30.0%
TTCAACTTGTATCTCATTGT+TGG + Chr4:89359934-89359953 MsG0480023747.01.T01:intron 30.0%
TTGTCAAGTTCAATAGATTC+TGG + Chr4:89362248-89362267 MsG0480023747.01.T01:intron 30.0%
! ATGCATTTTTGTGGTTACAT+TGG + Chr4:89359195-89359214 MsG0480023747.01.T01:intron 30.0%
! ATTTTCCATTTCAAAGAAGG+GGG + Chr4:89362124-89362143 MsG0480023747.01.T01:intron 30.0%
! ATTTTTGTGGTTACATTGGA+TGG + Chr4:89359199-89359218 MsG0480023747.01.T01:intron 30.0%
! CATTTTATATATTACCCCCT+CGG + Chr4:89361636-89361655 MsG0480023747.01.T01:intron 30.0%
! CTTTCAAATTCAATTGGCTT+TGG + Chr4:89363062-89363081 MsG0480023747.01.T01:intron 30.0%
! GTCTCAAATATGCATTTTTG+TGG + Chr4:89359186-89359205 MsG0480023747.01.T01:intron 30.0%
! TCTTTCCTGATAGTTTTTCT+AGG - Chr4:89360181-89360200 None:intergenic 30.0%
!! GTTTATTGAAGGTACTACTA+TGG - Chr4:89362218-89362237 None:intergenic 30.0%
!! TCTTGATTCTAGCTTATTGT+TGG + Chr4:89359881-89359900 MsG0480023747.01.T01:intron 30.0%
!! TGCTTGTTTTCTTTTACCAT+TGG + Chr4:89360837-89360856 MsG0480023747.01.T01:intron 30.0%
!! TTATTGAAGGTACTACTATG+GGG - Chr4:89362216-89362235 None:intergenic 30.0%
!!! CTATTTTTTTAGACACAAGG+AGG - Chr4:89362505-89362524 None:intergenic 30.0%
!!! GTCTCCAATGATTATTTTGA+AGG - Chr4:89360945-89360964 None:intergenic 30.0%
!!! TATCGGTGTTTTAGTATTAG+AGG - Chr4:89358920-89358939 None:intergenic 30.0%
!!! TTGTTTTAGCTCAATATCTG+AGG + Chr4:89359311-89359330 MsG0480023747.01.T01:intron 30.0%
AAAGTAAACCACAGTATCAC+GGG - Chr4:89358993-89359012 None:intergenic 35.0%
AACCTATACATTTGCAACCT+TGG + Chr4:89359706-89359725 MsG0480023747.01.T01:intron 35.0%
AAGAAAATACTTCTGGCGAA+AGG - Chr4:89362179-89362198 None:intergenic 35.0%
AAGAATACTCTGTTGATGCT+TGG + Chr4:89361489-89361508 MsG0480023747.01.T01:CDS 35.0%
AAGGTCTAATGACAATTTGG+AGG + Chr4:89358826-89358845 MsG0480023747.01.T01:intron 35.0%
AATAACCACAGCAGAATACA+TGG - Chr4:89362926-89362945 None:intergenic 35.0%
AATAATTCTTCACCAGTTCC+GGG - Chr4:89359739-89359758 None:intergenic 35.0%
ACACCATGACAGTTTATTGA+AGG - Chr4:89362229-89362248 None:intergenic 35.0%
ACCTATACATTTGCAACCTT+GGG + Chr4:89359707-89359726 MsG0480023747.01.T01:intron 35.0%
ACCTGCTTAGATATCATTGT+TGG - Chr4:89360587-89360606 None:intergenic 35.0%
AGGTCTAATGACAATTTGGA+GGG + Chr4:89358827-89358846 MsG0480023747.01.T01:intron 35.0%
AGTATCTCAATCCAAGTAAG+AGG - Chr4:89361530-89361549 None:intergenic 35.0%
ATCTGAACAGATAAGCAGAT+TGG - Chr4:89359411-89359430 None:intergenic 35.0%
ATGGAAAATATCGATAGCAG+AGG - Chr4:89362113-89362132 None:intergenic 35.0%
ATGTATTCTGCTGTGGTTAT+TGG + Chr4:89362925-89362944 MsG0480023747.01.T01:intron 35.0%
ATTAAACCTTTCCAGCACAA+CGG + Chr4:89363314-89363333 MsG0480023747.01.T01:CDS 35.0%
ATTGAAGTGGAGCTTTCTAA+TGG + Chr4:89361315-89361334 MsG0480023747.01.T01:CDS 35.0%
CAAAGTAAACCACAGTATCA+CGG - Chr4:89358994-89359013 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG - Chr4:89360339-89360358 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG + Chr4:89360336-89360355 MsG0480023747.01.T01:intron 35.0%
CCTGATGTAGCTTTCTTATT+CGG - Chr4:89359123-89359142 None:intergenic 35.0%
CGAATAAGAAAGCTACATCA+GGG + Chr4:89359121-89359140 MsG0480023747.01.T01:CDS 35.0%
CGAGGGGGTAATATATAAAA+TGG - Chr4:89361638-89361657 None:intergenic 35.0%
GAATAAGAAAGCTACATCAG+GGG + Chr4:89359122-89359141 MsG0480023747.01.T01:CDS 35.0%
GACAATGTGTTTATAAGTGG+GGG + Chr4:89360339-89360358 MsG0480023747.01.T01:intron 35.0%
GATATCTAAGCAGGTTTCAT+AGG + Chr4:89360592-89360611 MsG0480023747.01.T01:intron 35.0%
GATCTCTAAATCCTCTTACT+TGG + Chr4:89361516-89361535 MsG0480023747.01.T01:CDS 35.0%
GGTGCTTTGATCTTACAATT+AGG - Chr4:89358647-89358666 None:intergenic 35.0%
GTACCTTCAATAAACTGTCA+TGG + Chr4:89362223-89362242 MsG0480023747.01.T01:intron 35.0%
GTGGAGAAATATCTATGGAA+CGG - Chr4:89360626-89360645 None:intergenic 35.0%
GTTTAAATCTTGTCAGAACG+AGG + Chr4:89363178-89363197 MsG0480023747.01.T01:CDS 35.0%
TAAGTATGATGTGGCATTGT+GGG + Chr4:89360882-89360901 MsG0480023747.01.T01:intron 35.0%
TCCAACAATGATATCTAAGC+AGG + Chr4:89360583-89360602 MsG0480023747.01.T01:intron 35.0%
TGATACCGTCTTAGAATTTG+TGG - Chr4:89360408-89360427 None:intergenic 35.0%
TGCTATCATGTTTCCTCTAT+CGG + Chr4:89360455-89360474 MsG0480023747.01.T01:CDS 35.0%
TGGAAAATATCGATAGCAGA+GGG - Chr4:89362112-89362131 None:intergenic 35.0%
TTAAGTATGATGTGGCATTG+TGG + Chr4:89360881-89360900 MsG0480023747.01.T01:intron 35.0%
TTCCATAGATATTTCTCCAC+TGG + Chr4:89360626-89360645 MsG0480023747.01.T01:intron 35.0%
TTCTCTTTCTCCAAATTACC+TGG - Chr4:89359473-89359492 None:intergenic 35.0%
TTGAAGTGGAGCTTTCTAAT+GGG + Chr4:89361316-89361335 MsG0480023747.01.T01:CDS 35.0%
TTGCTTATAATAGTGACCGA+GGG - Chr4:89361655-89361674 None:intergenic 35.0%
TTTAAACAACTCGCACTTCA+AGG - Chr4:89363165-89363184 None:intergenic 35.0%
TTTGCTTATAATAGTGACCG+AGG - Chr4:89361788-89361769 None:intergenic 35.0%
! ACCTTTTTGTAAAAGCTTCC+CGG + Chr4:89361891-89361910 MsG0480023747.01.T01:intron 35.0%
! CAATATCTGAGGCAAGATAT+TGG + Chr4:89359322-89359341 MsG0480023747.01.T01:intron 35.0%
! CACATTTTTCTATGGGAAGT+TGG - Chr4:89359288-89359307 None:intergenic 35.0%
! CCTAACCACAAATTCTAAGA+CGG + Chr4:89360400-89360419 MsG0480023747.01.T01:CDS 35.0%
! CTTTGACTCAGGTTACATTT+TGG + Chr4:89361164-89361183 MsG0480023747.01.T01:intron 35.0%
! TAATGTGAGCTAGTTTGAGT+AGG + Chr4:89362846-89362865 MsG0480023747.01.T01:intron 35.0%
! TGTTCAGGCTTTTCATGATA+AGG + Chr4:89361130-89361149 MsG0480023747.01.T01:CDS 35.0%
! TTATGCACATTTTGCTCCAA+TGG - Chr4:89360856-89360875 None:intergenic 35.0%
!! TACAATTAGGATTTGTTGCC+AGG - Chr4:89358634-89358653 None:intergenic 35.0%
!!! TCAATTGGCTTTGGATTTTG+AGG + Chr4:89363071-89363090 MsG0480023747.01.T01:intron 35.0%
AACAAACTCATCAAGGGTGA+AGG - Chr4:89361114-89361133 None:intergenic 40.0%
AACATTTCTATGACGCTGAC+TGG - Chr4:89360710-89360729 None:intergenic 40.0%
AAGCCTGAACAAACTCATCA+AGG - Chr4:89361121-89361140 None:intergenic 40.0%
AAGTAACATCGAGTCCTGAA+AGG - Chr4:89361253-89361272 None:intergenic 40.0%
AAGTATGATGTGGCATTGTG+GGG + Chr4:89360883-89360902 MsG0480023747.01.T01:intron 40.0%
AATCAGAACATTTCGCCAGA+AGG + Chr4:89362049-89362068 MsG0480023747.01.T01:intron 40.0%
ACAAACTCATCAAGGGTGAA+GGG - Chr4:89361113-89361132 None:intergenic 40.0%
ACACTCTAGATGTTCTGTCT+TGG + Chr4:89360490-89360509 MsG0480023747.01.T01:CDS 40.0%
AGAACCAAAACTGATGTGGA+AGG - Chr4:89358875-89358894 None:intergenic 40.0%
AGATAGAAGCAGTGTGAGAA+GGG - Chr4:89361292-89361311 None:intergenic 40.0%
AGCAAGTCTACATGGCAAAT+TGG + Chr4:89360649-89360668 MsG0480023747.01.T01:intron 40.0%
AGCCTGAACAAACTCATCAA+GGG - Chr4:89361120-89361139 None:intergenic 40.0%
AGGTTATACCCAACCAATGT+GGG - Chr4:89360319-89360338 None:intergenic 40.0%
ATACCATGTCTGTCTTTCAC+AGG - Chr4:89358734-89358753 None:intergenic 40.0%
ATCAGAACATTTCGCCAGAA+GGG + Chr4:89362050-89362069 MsG0480023747.01.T01:intron 40.0%
CAACAGAACCAAAACTGATG+TGG - Chr4:89358879-89358898 None:intergenic 40.0%
CACTCTAGATGTTCTGTCTT+GGG + Chr4:89360491-89360510 MsG0480023747.01.T01:CDS 40.0%
CCGAATAAGAAAGCTACATC+AGG + Chr4:89359120-89359139 MsG0480023747.01.T01:CDS 40.0%
CCGTCTTAGAATTTGTGGTT+AGG - Chr4:89360403-89360422 None:intergenic 40.0%
CGTAAGATCAAACACTCTAG+AGG + Chr4:89361857-89361876 MsG0480023747.01.T01:intron 40.0%
CTCACTTTGTCCAGGTAATT+TGG + Chr4:89359460-89359479 MsG0480023747.01.T01:intron 40.0%
CTCCAGTGGAGAAATATCTA+TGG - Chr4:89360631-89360650 None:intergenic 40.0%
GAGACATGGTATGTAGGAAA+AGG + Chr4:89358807-89358826 MsG0480023747.01.T01:intron 40.0%
GAGGTTTGTCAGATCAAAAG+AGG + Chr4:89360145-89360164 MsG0480023747.01.T01:intron 40.0%
GATAGAGGAAACATGATAGC+AGG - Chr4:89360456-89360475 None:intergenic 40.0%
GCTATCATGTTTCCTCTATC+GGG + Chr4:89360456-89360475 MsG0480023747.01.T01:CDS 40.0%
GCTGACTGGTAGCTTAAATA+AGG - Chr4:89360696-89360715 None:intergenic 40.0%
GCTTCTATCTGACATTGAAG+TGG + Chr4:89361302-89361321 MsG0480023747.01.T01:CDS 40.0%
GTGAAAGACAGACATGGTAT+GGG + Chr4:89358734-89358753 MsG0480023747.01.T01:intron 40.0%
GTTACTTGGACAAATTCACG+TGG + Chr4:89361266-89361285 MsG0480023747.01.T01:CDS 40.0%
TACATACCATGTCTCTTCAC+AGG - Chr4:89358802-89358821 None:intergenic 40.0%
TATCTAAACCCGTGATACTG+TGG + Chr4:89358982-89359001 MsG0480023747.01.T01:intron 40.0%
TCCCAAGGTTGCAAATGTAT+AGG - Chr4:89359711-89359730 None:intergenic 40.0%
TGAAAGACAGACATGGTATG+GGG + Chr4:89358735-89358754 MsG0480023747.01.T01:intron 40.0%
TGACATTGCCTACTCTACTT+TGG + Chr4:89361039-89361058 MsG0480023747.01.T01:intron 40.0%
TGCTTATAATAGTGACCGAG+GGG - Chr4:89361654-89361673 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr4:89361771-89361790 MsG0480023747.01.T01:intron 40.0%
TGTGAAAGACAGACATGGTA+TGG + Chr4:89358733-89358752 MsG0480023747.01.T01:intron 40.0%
TGTGAAGAGACATGGTATGT+AGG + Chr4:89358801-89358820 MsG0480023747.01.T01:intron 40.0%
TGTTGTAAAGAGTCCCACAT+TGG + Chr4:89360303-89360322 MsG0480023747.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr4:89361770-89361789 MsG0480023747.01.T01:intron 40.0%
TTTCAGGACTCGATGTTACT+TGG + Chr4:89361252-89361271 MsG0480023747.01.T01:intron 40.0%
! AAGTCTTATCCCACTAAGTG+GGG - Chr4:89360277-89360296 None:intergenic 40.0%
! ACAACTTGCTCTTATACGAC+AGG + Chr4:89359234-89359253 MsG0480023747.01.T01:intron 40.0%
! ACCGGGAAGCTTTTACAAAA+AGG - Chr4:89361895-89361914 None:intergenic 40.0%
! CAACTTGCTCTTATACGACA+GGG + Chr4:89359235-89359254 MsG0480023747.01.T01:intron 40.0%
! CAAGTCTTATCCCACTAAGT+GGG - Chr4:89360278-89360297 None:intergenic 40.0%
! CATATCCCCCTTCTTTGAAA+TGG - Chr4:89362132-89362151 None:intergenic 40.0%
! GTGTGTCAAAGTGTCTACAT+TGG + Chr4:89360524-89360543 MsG0480023747.01.T01:intron 40.0%
! TAAAGAGTCCCACATTGGTT+GGG + Chr4:89360308-89360327 MsG0480023747.01.T01:intron 40.0%
! TACTAGCTACTGATTGCTTG+TGG + Chr4:89359633-89359652 MsG0480023747.01.T01:intron 40.0%
! TAGACCTTCCACATCAGTTT+TGG + Chr4:89358868-89358887 MsG0480023747.01.T01:intron 40.0%
! TCAAGTCTTATCCCACTAAG+TGG - Chr4:89360279-89360298 None:intergenic 40.0%
! TCGAGTCCTGAAAGGAATTT+TGG - Chr4:89361245-89361264 None:intergenic 40.0%
! TTGTTTGAAGTACCTTGCCA+AGG - Chr4:89361613-89361632 None:intergenic 40.0%
!! CTGTCATCACTTTCTAGTTG+TGG + Chr4:89362963-89362982 MsG0480023747.01.T01:intron 40.0%
!!! CAGTTTTGGTTCTGTTGACA+AGG + Chr4:89358882-89358901 MsG0480023747.01.T01:intron 40.0%
AAACACCGATATCGGTCAAC+AGG + Chr4:89358929-89358948 MsG0480023747.01.T01:intron 45.0%
AACACCTGCCAAAGTAGAGT+AGG - Chr4:89361050-89361069 None:intergenic 45.0%
ACAGACATGGTATGGGGAAA+GGG + Chr4:89358741-89358760 MsG0480023747.01.T01:intron 45.0%
AGGCCTAACACCCACAAAAT+CGG - Chr4:89360383-89360402 None:intergenic 45.0%
AGGGAAAAATATCCCCCTTC+TGG - Chr4:89362067-89362086 None:intergenic 45.0%
AGTACGCTGAGTAGATCAGA+TGG + Chr4:89360123-89360142 MsG0480023747.01.T01:intron 45.0%
ATACCACCATGTCTCTTCAC+AGG - Chr4:89358668-89358687 None:intergenic 45.0%
ATTGCCTACTCTACTTTGGC+AGG + Chr4:89361043-89361062 MsG0480023747.01.T01:intron 45.0%
CACCTAAGCCTCTACAATGT+GGG - Chr4:89360066-89360085 None:intergenic 45.0%
CAGATAGAAGCAGTGTGAGA+AGG - Chr4:89361293-89361312 None:intergenic 45.0%
CAGGTTATACCCAACCAATG+TGG - Chr4:89360320-89360339 None:intergenic 45.0%
CCTGTTCAGGTGAAAACATC+AGG - Chr4:89359069-89359088 None:intergenic 45.0%
GAAAGCTACATCAGGGGAAA+AGG + Chr4:89359128-89359147 MsG0480023747.01.T01:CDS 45.0%
GAGCTGAGAGAGATACAAGA+AGG + Chr4:89359383-89359402 MsG0480023747.01.T01:CDS 45.0%
GCTTATAATAGTGACCGAGG+GGG - Chr4:89361653-89361672 None:intergenic 45.0%
GTAAAGAGTCCCACATTGGT+TGG + Chr4:89360307-89360326 MsG0480023747.01.T01:intron 45.0%
GTGAAGAGACATGGTGGTAT+GGG + Chr4:89358668-89358687 MsG0480023747.01.T01:CDS 45.0%
GTTAGAGTCCCACATTGTAG+AGG + Chr4:89360055-89360074 MsG0480023747.01.T01:intron 45.0%
TACAGCCATGTATTCTGCTG+TGG + Chr4:89362918-89362937 MsG0480023747.01.T01:intron 45.0%
TCAGAACATTTCGCCAGAAG+GGG + Chr4:89362051-89362070 MsG0480023747.01.T01:intron 45.0%
TCTTCATCTTGACAGCACCT+GGG - Chr4:89359686-89359705 None:intergenic 45.0%
TGTAGAGGCTTAGGTGGTTT+GGG + Chr4:89360070-89360089 MsG0480023747.01.T01:intron 45.0%
TGTGAAGAGACATGGTGGTA+TGG + Chr4:89358667-89358686 MsG0480023747.01.T01:CDS 45.0%
TGTGACCTGTTGACCGATAT+CGG - Chr4:89358937-89358956 None:intergenic 45.0%
TTCTTCATCTTGACAGCACC+TGG - Chr4:89359687-89359706 None:intergenic 45.0%
TTGTAGAGGCTTAGGTGGTT+TGG + Chr4:89360069-89360088 MsG0480023747.01.T01:intron 45.0%
TTGTCAGAACGAGGCAACAA+TGG + Chr4:89363187-89363206 MsG0480023747.01.T01:CDS 45.0%
! AAAGCACCTGTGAAGAGACA+TGG + Chr4:89358659-89358678 MsG0480023747.01.T01:CDS 45.0%
! CAAGGTGCCTTTCAAAGAGA+GGG + Chr4:89361587-89361606 MsG0480023747.01.T01:CDS 45.0%
! CACCCTTGATGAGTTTGTTC+AGG + Chr4:89361115-89361134 MsG0480023747.01.T01:CDS 45.0%
! CCTGATGTTTTCACCTGAAC+AGG + Chr4:89359066-89359085 MsG0480023747.01.T01:intron 45.0%
! TTCCATCTAGAGCATGACAC+CGG - Chr4:89361913-89361932 None:intergenic 45.0%
!! ACCTTACCAGCCGATTTTGT+GGG + Chr4:89360370-89360389 MsG0480023747.01.T01:intron 45.0%
!! GTTGGTTCTGAGTTGCATAC+TGG - Chr4:89359270-89359289 None:intergenic 45.0%
!! TCAGATCAACTTGCTGCCAA+TGG + Chr4:89359425-89359444 MsG0480023747.01.T01:CDS 45.0%
!! TCTTTGAAAGGCACCTTGCT+TGG - Chr4:89361585-89361604 None:intergenic 45.0%
!! TGAGAATGTTCAAAGGCGCT+TGG - Chr4:89362743-89362762 None:intergenic 45.0%
!!! TAAATTTTGTTTATTAATAA+TGG + Chr4:89359041-89359060 MsG0480023747.01.T01:intron 5.0%
!!! TATTTTTTAAAAATTATTCA+AGG - Chr4:89360744-89360763 None:intergenic 5.0%
AAACCTTTCCAGCACAACGG+AGG + Chr4:89363317-89363336 MsG0480023747.01.T01:CDS 50.0%
AACTCGCACTTCAAGGTTCC+AGG - Chr4:89363158-89363177 None:intergenic 50.0%
AATTCTTCACCAGTTCCGGG+AGG - Chr4:89359736-89359755 None:intergenic 50.0%
ACCCACAAAATCGGCTGGTA+AGG - Chr4:89360374-89360393 None:intergenic 50.0%
ACGCTGAGTAGATCAGATGG+AGG + Chr4:89360126-89360145 MsG0480023747.01.T01:intron 50.0%
ACTCGCACTTCAAGGTTCCA+GGG - Chr4:89363157-89363176 None:intergenic 50.0%
ACTTCAAGGTTCCAGGGCAT+AGG - Chr4:89363151-89363170 None:intergenic 50.0%
AGACATGGTATGGGGAAAGG+GGG + Chr4:89358743-89358762 MsG0480023747.01.T01:intron 50.0%
AGACATGGTGGTATGGGCAA+AGG + Chr4:89358674-89358693 MsG0480023747.01.T01:CDS 50.0%
AGAGCCTACCAAGATCCGTT+GGG + Chr4:89360427-89360446 MsG0480023747.01.T01:CDS 50.0%
ATGTTCTGTCTTGGGCGTGA+GGG + Chr4:89360499-89360518 MsG0480023747.01.T01:intron 50.0%
CAGAACATTTCGCCAGAAGG+GGG + Chr4:89362052-89362071 MsG0480023747.01.T01:intron 50.0%
CAGACATGGTATGGGGAAAG+GGG + Chr4:89358742-89358761 MsG0480023747.01.T01:intron 50.0%
CAGCGTACTGCAACATCTAC+AGG - Chr4:89360112-89360131 None:intergenic 50.0%
CATGATAGCAGGTAGCCCAA+CGG - Chr4:89360445-89360464 None:intergenic 50.0%
CCACATTGTAGAGGCTTAGG+TGG + Chr4:89360064-89360083 MsG0480023747.01.T01:intron 50.0%
CCACCTAAGCCTCTACAATG+TGG - Chr4:89360067-89360086 None:intergenic 50.0%
CTAACACCCACAAAATCGGC+TGG - Chr4:89360379-89360398 None:intergenic 50.0%
CTGAACAGGAAAGCCGAAAC+AGG + Chr4:89359080-89359099 MsG0480023747.01.T01:intron 50.0%
CTGTTTCGGCTTTCCTGTTC+AGG - Chr4:89359082-89359101 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr4:89360273-89360292 None:intergenic 50.0%
CTTCATCTTGACAGCACCTG+GGG - Chr4:89359685-89359704 None:intergenic 50.0%
CTTGCTGCCAATGGAATGCT+TGG + Chr4:89359434-89359453 MsG0480023747.01.T01:CDS 50.0%
GACAGACATGGTATGGGGAA+AGG + Chr4:89358740-89358759 MsG0480023747.01.T01:intron 50.0%
GCACCTGTGAAAGACAGACA+TGG + Chr4:89358728-89358747 MsG0480023747.01.T01:CDS 50.0%
GTAAACTATGGCCTATGCCC+TGG + Chr4:89363137-89363156 MsG0480023747.01.T01:CDS 50.0%
GTCCCACATTGTAGAGGCTT+AGG + Chr4:89360061-89360080 MsG0480023747.01.T01:intron 50.0%
TCCACTGGAGCAAGTCTACA+TGG + Chr4:89360641-89360660 MsG0480023747.01.T01:intron 50.0%
TGAGATACTCCGTCAAGTGC+TGG + Chr4:89361541-89361560 MsG0480023747.01.T01:CDS 50.0%
TGAGCCACCAAGCATTCCAT+TGG - Chr4:89359444-89359463 None:intergenic 50.0%
TTCATCTTGACAGCACCTGG+GGG - Chr4:89359684-89359703 None:intergenic 50.0%
! CATCTAGAGTGTGAGCTGAG+TGG - Chr4:89360482-89360501 None:intergenic 50.0%
! GCAAGGTGCCTTTCAAAGAG+AGG + Chr4:89361586-89361605 MsG0480023747.01.T01:CDS 50.0%
! TCCATCTAGAGCATGACACC+GGG - Chr4:89361912-89361931 None:intergenic 50.0%
!! CACCTTACCAGCCGATTTTG+TGG + Chr4:89360369-89360388 MsG0480023747.01.T01:intron 50.0%
!! CAGCCGATTTTGTGGGTGTT+AGG + Chr4:89360377-89360396 MsG0480023747.01.T01:intron 50.0%
CAGAGCCTACCAAGATCCGT+TGG + Chr4:89360426-89360445 MsG0480023747.01.T01:CDS 55.0%
CAGCAGCTACCAGCACTTGA+CGG - Chr4:89361553-89361572 None:intergenic 55.0%
GATGTTCTGTCTTGGGCGTG+AGG + Chr4:89360498-89360517 MsG0480023747.01.T01:intron 55.0%
GCACCTGTGAAGAGACATGG+TGG + Chr4:89358662-89358681 MsG0480023747.01.T01:CDS 55.0%
GCCAAGGCCCTCTCTTTGAA+AGG - Chr4:89361597-89361616 None:intergenic 55.0%
GCCTTTCAAAGAGAGGGCCT+TGG + Chr4:89361593-89361612 MsG0480023747.01.T01:CDS 55.0%
GCTGCCAATGGAATGCTTGG+TGG + Chr4:89359437-89359456 MsG0480023747.01.T01:CDS 55.0%
GTAGCCCAACGGATCTTGGT+AGG - Chr4:89360434-89360453 None:intergenic 55.0%
GTTCCTCCGTTGTGCTGGAA+AGG - Chr4:89363323-89363342 None:intergenic 55.0%
TCAAAGAGAGGGCCTTGGCA+AGG + Chr4:89361598-89361617 MsG0480023747.01.T01:CDS 55.0%
TGGTGGTATGGGCAAAGGTC+TGG + Chr4:89358679-89358698 MsG0480023747.01.T01:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr4:89360265-89360284 MsG0480023747.01.T01:intron 55.0%
TGTGCTAGTCAAGTTCCCCC+AGG + Chr4:89359666-89359685 MsG0480023747.01.T01:intron 55.0%
TGTTCTGTCTTGGGCGTGAG+GGG + Chr4:89360500-89360519 MsG0480023747.01.T01:intron 55.0%
TTGTAGCCGACCCCACTTAG+TGG + Chr4:89360264-89360283 MsG0480023747.01.T01:intron 55.0%
! CTCTAGTTCCTCCGTTGTGC+TGG - Chr4:89363328-89363347 None:intergenic 55.0%
! CTTGGTGGCTCACTTTGTCC+AGG + Chr4:89359452-89359471 MsG0480023747.01.T01:CDS 55.0%
! GCCATGTAGACTTGCTCCAG+TGG - Chr4:89360645-89360664 None:intergenic 55.0%
! GCTGGATTCGGTTCCAAGCA+AGG + Chr4:89361569-89361588 MsG0480023747.01.T01:CDS 55.0%
! GTGCTGGTAGCTGCTGGATT+CGG + Chr4:89361557-89361576 MsG0480023747.01.T01:CDS 55.0%
!! TCCCGGTGTCATGCTCTAGA+TGG + Chr4:89361908-89361927 MsG0480023747.01.T01:intron 55.0%
ATGGTATGGGGAAAGGGGGC+TGG + Chr4:89358747-89358766 MsG0480023747.01.T01:intron 60.0%
GCAGGTAGCCCAACGGATCT+TGG - Chr4:89360438-89360457 None:intergenic 60.0%
TGAGCTGAGTGGCCCGATAG+AGG - Chr4:89360471-89360490 None:intergenic 60.0%
TGCAACCTTGGGACTCCTCC+CGG + Chr4:89359718-89359737 MsG0480023747.01.T01:intron 60.0%
!! CGTCAAGTGCTGGTAGCTGC+TGG + Chr4:89361551-89361570 MsG0480023747.01.T01:CDS 60.0%
CAGTTCCGGGAGGAGTCCCA+AGG - Chr4:89359726-89359745 None:intergenic 65.0%
CTTGGGACTCCTCCCGGAAC+TGG + Chr4:89359724-89359743 MsG0480023747.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 89358620 89363373 89358620 ID=MsG0480023747.01;Name=MsG0480023747.01
Chr4 mRNA 89358620 89363373 89358620 ID=MsG0480023747.01.T01;Parent=MsG0480023747.01;Name=MsG0480023747.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.38|0.42|0.92|0.84|0.64|14|0|301
Chr4 exon 89358620 89358749 89358620 ID=MsG0480023747.01.T01:exon:25234;Parent=MsG0480023747.01.T01
Chr4 exon 89359088 89359174 89359088 ID=MsG0480023747.01.T01:exon:25235;Parent=MsG0480023747.01.T01
Chr4 exon 89359378 89359473 89359378 ID=MsG0480023747.01.T01:exon:25236;Parent=MsG0480023747.01.T01
Chr4 exon 89360399 89360514 89360399 ID=MsG0480023747.01.T01:exon:25237;Parent=MsG0480023747.01.T01
Chr4 exon 89361065 89361151 89361065 ID=MsG0480023747.01.T01:exon:25238;Parent=MsG0480023747.01.T01
Chr4 exon 89361258 89361341 89361258 ID=MsG0480023747.01.T01:exon:25239;Parent=MsG0480023747.01.T01
Chr4 exon 89361479 89361619 89361479 ID=MsG0480023747.01.T01:exon:25240;Parent=MsG0480023747.01.T01
Chr4 exon 89363122 89363218 89363122 ID=MsG0480023747.01.T01:exon:25241;Parent=MsG0480023747.01.T01
Chr4 exon 89363306 89363373 89363306 ID=MsG0480023747.01.T01:exon:25242;Parent=MsG0480023747.01.T01
Chr4 CDS 89358620 89358749 89358620 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89359088 89359174 89359088 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89359378 89359473 89359378 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89360399 89360514 89360399 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89361065 89361151 89361065 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89361258 89361341 89361258 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89361479 89361619 89361479 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89363122 89363218 89363122 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Chr4 CDS 89363306 89363373 89363306 ID=MsG0480023747.01.T01:cds;Parent=MsG0480023747.01.T01
Gene Sequence

>MsG0480023747.01.T01

ATGGGCAAAGGCCTGGCAACAAATCCTAATTGTAAGATCAAAGCACCTGTGAAGAGACATGGTGGTATGGGCAAAGGTCTGGCAACAAATCCTAATTGTAATATGAAAGCACCTGTGAAAGACAGACATGGAAAGCCGAAACAGGAAATAAGAAATAAAATGCCGAATAAGAAAGCTACATCAGGGGAAAAGGAAACATTTCGTGAAAAAAATAGTGAGTTAGAGCTGAGAGAGATACAAGAAGGAACCAATCTGCTTATCTGTTCAGATCAACTTGCTGCCAATGGAATGCTTGGTGGCTCACTTTGTCCAGGCCTAACCACAAATTCTAAGACGGTATCAGAGCCTACCAAGATCCGTTGGGCTACCTGCTATCATGTTTCCTCTATCGGGCCACTCAGCTCACACTCTAGATGTTCTGTCTTGGGCGTGTTCCATTTCATCTATACATATGCTGTAGTTGTTGATGTTTGTCCCTTCACCCTTGATGAGTTTGTTCAGGCTTTTCATGATAAGGACTCGATGTTACTTGGACAAATTCACGTGGCCCTTCTCACACTGCTTCTATCTGACATTGAAGTGGAGCTTTCTAATGGGTTTGTTGAAAATCAAGAATACTCTGTTGATGCTTGGAGAAGATCTCTAAATCCTCTTACTTGGATTGAGATACTCCGTCAAGTGCTGGTAGCTGCTGGATTCGGTTCCAAGCAAGGTGCCTTTCAAAGAGAGGGCCTTGGCAAGGAATTGGATATTCTTGTAAACTATGGCCTATGCCCTGGAACCTTGAAGTGCGAGTTGTTTAAATCTTGTCAGAACGAGGCAACAATGGATGCAATAAATTGCGGAATTAAACCTTTCCAGCACAACGGAGGAACTAGAGTCTTAATATTCCACACTTTCAAGTGA
Protein sequence

>MsG0480023747.01.T01

MGKGLATNPNCKIKAPVKRHGGMGKGLATNPNCNMKAPVKDRHGKPKQEIRNKMPNKKATSGEKETFREKNSELELREIQEGTNLLICSDQLAANGMLGGSLCPGLTTNSKTVSEPTKIRWATCYHVSSIGPLSSHSRCSVLGVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGQIHVALLTLLLSDIEVELSNGFVENQEYSVDAWRRSLNPLTWIEILRQVLVAAGFGSKQGAFQREGLGKELDILVNYGLCPGTLKCELFKSCQNEATMDAINCGIKPFQHNGGTRVLIFHTFK*