AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027127.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027127.01.T01 MTR_6g069000 94.969 477 8 1 3 479 2 462 0.0 935
MsG0580027127.01.T01 MTR_6g069000 98.230 452 8 0 28 479 1 452 0.0 926
MsG0580027127.01.T01 MTR_8g077810 36.364 451 280 4 59 502 25 475 1.85e-107 330
MsG0580027127.01.T01 MTR_5g020020 35.022 454 283 5 57 502 26 475 7.10e-105 322
MsG0580027127.01.T01 MTR_5g082520 35.570 447 275 5 66 507 27 465 5.51e-103 317
MsG0580027127.01.T01 MTR_7g033040 35.244 471 292 6 39 504 5 467 5.25e-102 315
MsG0580027127.01.T01 MTR_8g016180 33.121 471 299 7 32 496 1 461 7.32e-102 314
MsG0580027127.01.T01 MTR_3g070380 34.513 452 285 6 66 512 28 473 1.01e-99 309
MsG0580027127.01.T01 MTR_8g076510 32.962 449 278 10 68 505 40 476 2.67e-91 287
MsG0580027127.01.T01 MTR_5g021220 30.435 483 299 9 38 496 9 478 1.67e-86 275
MsG0580027127.01.T01 MTR_8g016180 32.099 405 267 5 32 430 1 403 8.26e-83 263
MsG0580027127.01.T01 MTR_5g010750 31.729 457 293 7 65 510 29 477 2.41e-81 261
MsG0580027127.01.T01 MTR_6g015910 29.487 468 304 8 41 502 12 459 6.12e-77 249
MsG0580027127.01.T01 MTR_7g016040 30.670 463 302 6 42 502 13 458 1.32e-76 248
MsG0580027127.01.T01 MTR_3g007320 28.846 468 307 8 41 502 12 459 1.33e-76 248
MsG0580027127.01.T01 MTR_5g010750 32.227 422 271 6 65 479 29 442 5.77e-76 246
MsG0580027127.01.T01 MTR_8g089800 30.415 434 279 9 67 486 43 467 4.67e-70 232
MsG0580027127.01.T01 MTR_5g020020 33.728 338 212 6 173 502 68 401 4.59e-68 224
MsG0580027127.01.T01 MTR_5g025610 29.832 476 304 12 37 504 7 460 3.36e-66 221
MsG0580027127.01.T01 MTR_2g031930 29.673 428 281 8 67 483 45 463 1.20e-64 218
MsG0580027127.01.T01 MTR_2g031930 29.717 424 278 8 67 479 41 455 2.22e-64 216
MsG0580027127.01.T01 MTR_2g031920 29.011 455 296 10 67 506 41 483 4.96e-64 216
MsG0580027127.01.T01 MTR_5g025610 29.736 454 290 11 37 483 7 438 7.21e-64 214
MsG0580027127.01.T01 MTR_8g072260 29.978 447 289 11 67 507 37 465 3.75e-63 213
MsG0580027127.01.T01 MTR_0045s0060 28.696 460 305 10 57 506 30 476 1.24e-61 209
MsG0580027127.01.T01 MTR_8g072260 30.144 418 269 10 67 479 37 436 1.34e-60 206
MsG0580027127.01.T01 MTR_4g086130 31.818 440 268 11 55 481 21 441 1.84e-60 206
MsG0580027127.01.T01 MTR_1g019410 29.139 453 300 8 34 479 2 440 3.02e-60 206
MsG0580027127.01.T01 MTR_1g037580 30.720 472 305 10 40 505 19 474 4.30e-58 200
MsG0580027127.01.T01 MTR_5g014250 26.122 490 312 14 36 495 9 478 6.30e-56 195
MsG0580027127.01.T01 MTR_5g091760 27.902 491 327 9 32 508 1 478 1.13e-54 191
MsG0580027127.01.T01 MTR_5g092150 26.464 461 317 7 59 507 21 471 2.86e-54 190
MsG0580027127.01.T01 MTR_6g034940 28.238 471 294 14 37 486 12 459 6.98e-54 189
MsG0580027127.01.T01 MTR_0045s0060 27.833 406 276 7 106 506 1 394 8.69e-54 186
MsG0580027127.01.T01 MTR_4g086040 29.245 424 276 9 66 481 37 444 2.27e-52 185
MsG0580027127.01.T01 MTR_4g005230 29.231 455 290 15 67 506 43 480 3.49e-52 184
MsG0580027127.01.T01 MTR_5g025610 28.928 401 264 9 37 430 7 393 3.62e-52 182
MsG0580027127.01.T01 MTR_0045s0070 25.877 456 313 9 62 506 35 476 4.96e-51 181
MsG0580027127.01.T01 MTR_0045s0070 26.636 428 290 8 62 479 35 448 2.49e-49 176
MsG0580027127.01.T01 MTR_1g032950 26.164 451 299 14 67 506 43 470 7.35e-49 175
MsG0580027127.01.T01 MTR_8g072260 28.997 369 247 8 67 430 37 395 8.16e-49 175
MsG0580027127.01.T01 MTR_5g014240 27.088 491 324 16 36 506 9 485 1.00e-48 175
MsG0580027127.01.T01 MTR_8g012970 27.315 432 284 12 67 483 45 461 1.32e-48 175
MsG0580027127.01.T01 MTR_8g100135 25.740 439 306 7 60 487 27 456 3.32e-48 174
MsG0580027127.01.T01 MTR_8g076940 26.386 451 309 9 40 480 19 456 5.01e-47 171
MsG0580027127.01.T01 MTR_7g016040 28.814 354 239 5 42 393 13 355 5.96e-46 165
MsG0580027127.01.T01 MTR_3g112120 24.625 467 320 11 36 486 11 461 2.26e-45 166
MsG0580027127.01.T01 MTR_8g089190 26.256 438 291 10 67 487 1 423 4.92e-45 164
MsG0580027127.01.T01 MTR_3g467130 25.866 433 298 7 64 483 30 452 2.07e-44 163
MsG0580027127.01.T01 MTR_3g467140 27.056 462 304 12 38 483 8 452 8.47e-44 162
MsG0580027127.01.T01 MTR_8g076940 26.000 400 283 7 40 430 19 414 4.98e-38 144
MsG0580027127.01.T01 MTR_0045s0080 25.000 384 266 8 57 430 30 401 1.21e-36 140
MsG0580027127.01.T01 MTR_8g100135 25.140 358 255 6 60 406 27 382 4.44e-33 130
MsG0580027127.01.T01 MTR_8g076940 26.039 361 254 7 40 391 19 375 2.75e-32 128
MsG0580027127.01.T01 MTR_8g076940 25.474 369 262 7 40 399 19 383 2.99e-32 127
MsG0580027127.01.T01 MTR_8g089190 25.496 353 237 9 67 402 1 344 1.25e-30 122
MsG0580027127.01.T01 MTR_1g032980 25.685 292 204 7 67 347 16 305 2.15e-29 120
MsG0580027127.01.T01 MTR_3g467140 29.167 312 195 9 185 483 21 319 1.03e-27 114
MsG0580027127.01.T01 MTR_5g007550 24.841 471 308 16 37 481 14 464 3.82e-26 112
MsG0580027127.01.T01 MTR_5g007450 24.307 469 313 15 37 481 14 464 1.11e-25 110
MsG0580027127.01.T01 MTR_5g094570 22.332 506 337 17 37 509 10 492 1.53e-21 98.2
MsG0580027127.01.T01 MTR_1g037370 24.554 448 290 16 66 481 30 461 2.90e-21 97.1
MsG0580027127.01.T01 MTR_5g073250 22.800 500 336 17 40 509 13 492 4.54e-21 96.7
MsG0580027127.01.T01 MTR_5g072980 23.385 449 298 13 67 481 33 469 8.80e-21 95.9
MsG0580027127.01.T01 MTR_5g072930 23.385 449 298 13 67 481 33 469 8.80e-21 95.9
MsG0580027127.01.T01 MTR_1g035140 22.965 479 325 16 33 481 3 467 1.04e-20 95.5
MsG0580027127.01.T01 MTR_5g094550 21.849 476 323 14 37 481 10 467 1.53e-20 95.1
MsG0580027127.01.T01 MTR_5g094560 21.807 509 336 19 37 509 10 492 2.60e-20 94.4
MsG0580027127.01.T01 MTR_7g096340 22.708 480 310 20 72 507 40 502 3.12e-20 94.0
MsG0580027127.01.T01 MTR_5g094520 23.247 542 355 22 1 509 10 523 3.80e-20 94.0
MsG0580027127.01.T01 MTR_0181s0030 21.830 481 324 15 36 481 6 469 6.35e-20 93.2
MsG0580027127.01.T01 MTR_5g073230 21.956 501 299 19 54 509 28 481 9.40e-20 92.4
MsG0580027127.01.T01 MTR_5g019010 24.652 503 326 21 42 504 9 498 1.08e-19 92.4
MsG0580027127.01.T01 MTR_7g075610 21.667 480 326 15 38 481 5 470 1.09e-19 92.4
MsG0580027127.01.T01 MTR_4g095050 22.892 498 301 18 40 488 8 471 1.64e-19 92.0
MsG0580027127.01.T01 MTR_8g046240 23.347 484 320 18 33 481 6 473 1.93e-19 91.7
MsG0580027127.01.T01 MTR_3g057900 21.553 515 331 17 40 509 3 489 2.51e-19 91.3
MsG0580027127.01.T01 MTR_3g057910 23.780 492 314 20 56 509 27 495 2.71e-19 91.3
MsG0580027127.01.T01 MTR_5g007460 24.726 457 292 19 61 481 3 443 2.74e-19 90.9
MsG0580027127.01.T01 MTR_3g057980 22.979 470 321 13 42 481 5 463 4.37e-19 90.5
MsG0580027127.01.T01 MTR_1g492820 22.105 475 323 15 40 480 22 483 4.55e-19 90.5
MsG0580027127.01.T01 MTR_1g031700 22.766 470 321 15 41 481 8 464 5.59e-19 90.1
MsG0580027127.01.T01 MTR_5g094540 22.600 500 338 18 40 504 10 495 7.21e-19 89.7
MsG0580027127.01.T01 MTR_4g029690 24.042 287 196 10 67 339 43 321 7.44e-19 88.2
MsG0580027127.01.T01 MTR_3g057970 21.064 470 329 14 40 481 3 458 9.01e-19 89.7
MsG0580027127.01.T01 MTR_4g133750 24.416 471 314 15 39 481 14 470 9.82e-19 89.4
MsG0580027127.01.T01 MTR_5g018990 24.843 479 307 20 66 504 34 499 1.12e-18 89.4
MsG0580027127.01.T01 MTR_4g102310 22.595 447 299 15 67 480 39 471 1.30e-18 89.4
MsG0580027127.01.T01 MTR_5g094660 20.954 482 326 17 61 509 32 491 3.01e-18 87.8
MsG0580027127.01.T01 MTR_5g016440 22.154 492 326 16 40 494 6 477 4.61e-18 87.4
MsG0580027127.01.T01 MTR_5g021390 24.701 502 308 21 24 481 5 480 5.12e-18 87.4
MsG0580027127.01.T01 MTR_7g079440 29.474 190 128 3 293 481 435 619 5.82e-18 87.8
MsG0580027127.01.T01 MTR_4g025970 24.444 450 295 14 65 481 27 464 1.23e-17 86.3
MsG0580027127.01.T01 MTR_5g016410 22.790 509 323 19 36 504 5 483 1.42e-17 85.9
MsG0580027127.01.T01 MTR_2g073480 25.614 285 196 9 210 487 111 386 1.43e-17 85.1
MsG0580027127.01.T01 MTR_2g073440 25.614 285 196 9 210 487 178 453 1.93e-17 85.5
MsG0580027127.01.T01 MTR_5g018980 25.221 452 281 20 66 474 33 470 2.24e-17 85.5
MsG0580027127.01.T01 MTR_8g046210 23.029 482 324 16 33 481 6 473 2.92e-17 85.1
MsG0580027127.01.T01 MTR_4g048580 21.915 470 323 15 68 509 39 492 2.98e-17 84.7
MsG0580027127.01.T01 MTR_0171s0010 29.146 199 131 4 284 481 288 477 3.96e-17 84.7
MsG0580027127.01.T01 MTR_5g073320 22.718 471 319 17 67 504 38 496 5.64e-17 84.0
MsG0580027127.01.T01 MTR_5g095220 22.737 453 289 16 57 481 18 437 6.33e-17 83.6
MsG0580027127.01.T01 MTR_5g095290 22.432 477 313 16 43 481 10 467 8.10e-17 83.6
MsG0580027127.01.T01 MTR_4g109470 26.724 232 156 5 260 481 243 470 1.24e-16 83.2
MsG0580027127.01.T01 MTR_0171s0020 23.203 487 315 17 36 481 7 475 1.38e-16 82.8
MsG0580027127.01.T01 MTR_5g045250 28.444 225 147 6 264 480 268 486 1.58e-16 82.8
MsG0580027127.01.T01 MTR_3g058210 22.899 476 306 18 47 481 15 470 1.98e-16 82.4
MsG0580027127.01.T01 MTR_4g071710 24.664 223 155 5 260 481 270 480 2.66e-16 82.0
MsG0580027127.01.T01 MTR_1g101040 24.581 358 241 11 145 481 138 487 2.69e-16 82.0
MsG0580027127.01.T01 MTR_4g094772 24.740 481 278 22 52 488 18 458 2.82e-16 81.6
MsG0580027127.01.T01 MTR_8g063280 21.941 474 333 11 35 481 4 467 7.62e-16 80.5
MsG0580027127.01.T01 MTR_1g055325 27.935 247 165 7 247 487 252 491 9.25e-16 80.1
MsG0580027127.01.T01 MTR_5g095260 22.727 462 299 15 56 481 29 468 1.32e-15 79.7
MsG0580027127.01.T01 MTR_1g103670 20.497 483 329 16 32 481 4 464 1.39e-15 79.7
MsG0580027127.01.T01 MTR_7g103450 22.505 471 301 15 55 481 34 484 1.56e-15 79.7
MsG0580027127.01.T01 MTR_3g057860 22.747 466 312 18 38 469 8 459 1.83e-15 79.3
MsG0580027127.01.T01 MTR_0147s0030 25.137 366 222 15 147 479 155 501 2.73e-15 79.0
MsG0580027127.01.T01 MTR_8g036185 27.027 185 126 2 304 481 303 485 3.12e-15 78.6
MsG0580027127.01.T01 MTR_2g073420 28.512 242 158 8 247 481 242 475 3.28e-15 78.6
MsG0580027127.01.T01 MTR_5g094520 27.189 217 139 7 299 509 215 418 3.40e-15 78.2
MsG0580027127.01.T01 MTR_2g437840 22.110 493 292 19 67 503 31 487 4.59e-15 78.2
MsG0580027127.01.T01 MTR_5g045770 23.608 449 299 14 65 481 27 463 4.64e-15 78.2
MsG0580027127.01.T01 MTR_8g008530 25.243 412 262 17 101 480 93 490 5.58e-15 77.8
MsG0580027127.01.T01 MTR_3g104560 23.967 242 169 6 250 482 137 372 7.30e-15 77.0
MsG0580027127.01.T01 MTR_8g012590 27.948 229 151 6 289 507 274 498 8.17e-15 77.4
MsG0580027127.01.T01 MTR_4g102280 22.038 422 274 15 99 480 71 477 8.84e-15 77.4
MsG0580027127.01.T01 MTR_4g062510 26.344 186 130 3 304 486 307 488 9.84e-15 77.0
MsG0580027127.01.T01 MTR_3g051230 30.579 121 84 0 44 164 3 123 1.09e-14 72.4
MsG0580027127.01.T01 MTR_6g008640 22.440 459 293 19 68 474 40 487 1.14e-14 77.0
MsG0580027127.01.T01 MTR_1g091010 23.542 480 311 21 35 481 5 461 1.22e-14 76.6
MsG0580027127.01.T01 MTR_8g020960 21.457 494 309 18 36 481 11 473 1.30e-14 76.6
MsG0580027127.01.T01 MTR_3g025260 22.275 422 286 12 92 474 52 470 2.47e-14 75.9
MsG0580027127.01.T01 MTR_2g437880 26.991 226 148 6 272 491 261 475 3.22e-14 75.5
MsG0580027127.01.T01 MTR_1g091023 24.229 454 282 22 66 481 33 462 3.33e-14 75.5
MsG0580027127.01.T01 MTR_8g468780 25.110 227 158 5 263 480 181 404 3.82e-14 75.1
MsG0580027127.01.T01 MTR_1g015860 24.167 240 171 4 250 482 264 499 5.24e-14 74.7
MsG0580027127.01.T01 MTR_4g088400 23.894 452 290 21 66 474 44 484 6.84e-14 74.3
MsG0580027127.01.T01 MTR_4g026050 22.472 445 303 12 68 481 30 463 1.28e-13 73.6
MsG0580027127.01.T01 MTR_7g029275 20.508 512 340 20 43 507 17 508 1.35e-13 73.6
MsG0580027127.01.T01 MTR_6g035115 22.296 453 295 14 59 474 29 461 1.71e-13 73.2
MsG0580027127.01.T01 MTR_3g020780 20.000 485 336 12 36 481 7 478 2.78e-13 72.4
MsG0580027127.01.T01 MTR_5g014230 38.554 83 43 3 414 495 1 76 3.23e-13 66.2
MsG0580027127.01.T01 MTR_4g077210 22.430 428 291 14 96 490 59 478 3.34e-13 72.4
MsG0580027127.01.T01 MTR_8g469300 27.957 186 130 3 296 480 291 473 4.26e-13 72.0
MsG0580027127.01.T01 MTR_0025s0110 22.983 409 276 12 101 481 101 498 5.33e-13 71.6
MsG0580027127.01.T01 MTR_2g061200 26.257 179 128 2 304 481 326 501 5.33e-13 71.6
MsG0580027127.01.T01 MTR_8g076290 22.042 431 285 16 68 461 36 452 5.83e-13 71.6
MsG0580027127.01.T01 MTR_6g034965 23.207 474 312 17 39 481 14 466 6.79e-13 71.2
MsG0580027127.01.T01 MTR_8g098565 26.178 191 135 3 299 484 289 478 7.21e-13 71.2
MsG0580027127.01.T01 MTR_2g010250 25.654 191 137 3 295 481 286 475 7.26e-13 71.2
MsG0580027127.01.T01 MTR_1g022040 22.685 432 292 11 78 478 52 472 7.74e-13 71.2
MsG0580027127.01.T01 MTR_5g023680 23.937 447 296 13 67 481 5 439 7.90e-13 70.9
MsG0580027127.01.T01 MTR_5g094840 23.241 469 317 17 42 481 19 473 8.19e-13 71.2
MsG0580027127.01.T01 MTR_4g062500 25.405 185 133 3 304 486 303 484 9.61e-13 70.9
MsG0580027127.01.T01 MTR_8g080520 20.309 453 292 14 70 480 70 495 1.22e-12 70.5
MsG0580027127.01.T01 MTR_5g019140 21.978 546 317 23 37 507 19 530 1.33e-12 70.5
MsG0580027127.01.T01 MTR_5g070850 23.218 491 297 18 35 474 7 468 1.70e-12 70.1
MsG0580027127.01.T01 MTR_5g094510 27.397 219 121 7 296 509 47 232 1.98e-12 67.8
MsG0580027127.01.T01 MTR_1g103680 23.203 487 311 17 41 490 17 477 2.10e-12 69.7
MsG0580027127.01.T01 MTR_7g006900 29.365 252 150 11 264 504 235 469 2.21e-12 69.7
MsG0580027127.01.T01 MTR_5g018500 28.283 198 130 6 323 511 1 195 2.67e-12 66.2
MsG0580027127.01.T01 MTR_7g075540 27.807 187 125 5 297 480 287 466 2.70e-12 69.3
MsG0580027127.01.T01 MTR_1g107295 24.590 183 134 2 304 486 308 486 2.75e-12 69.3
MsG0580027127.01.T01 MTR_7g079440 29.710 138 94 1 293 430 435 569 2.98e-12 69.3
MsG0580027127.01.T01 MTR_8g035760 23.844 411 263 20 117 487 88 488 3.68e-12 68.9
MsG0580027127.01.T01 MTR_6g008430 22.151 465 289 21 65 474 36 482 5.17e-12 68.6
MsG0580027127.01.T01 MTR_3g014880 21.844 499 313 20 37 474 8 490 5.58e-12 68.6
MsG0580027127.01.T01 MTR_4g088425 23.026 456 297 21 56 474 30 468 6.21e-12 68.2
MsG0580027127.01.T01 MTR_1g085680 22.018 436 285 19 85 480 67 487 8.29e-12 67.8
MsG0580027127.01.T01 MTR_1g107300 25.000 172 125 2 315 486 7 174 8.61e-12 65.1
MsG0580027127.01.T01 MTR_3g024520 25.556 180 130 3 304 481 296 473 1.05e-11 67.4
MsG0580027127.01.T01 MTR_1g090987 32.800 125 77 4 359 481 31 150 1.11e-11 63.9
MsG0580027127.01.T01 MTR_4g104570 28.324 173 116 4 311 481 1 167 1.14e-11 64.3
MsG0580027127.01.T01 MTR_8g104100 24.651 215 145 5 269 481 29 228 1.20e-11 65.5
MsG0580027127.01.T01 MTR_3g025230 25.000 180 131 3 304 481 296 473 1.53e-11 67.0
MsG0580027127.01.T01 MTR_2g105360 23.291 468 277 20 66 481 32 469 1.62e-11 67.0
MsG0580027127.01.T01 MTR_5g009110 26.471 204 121 6 301 478 190 390 1.64e-11 66.6
MsG0580027127.01.T01 MTR_5g070700 28.022 182 120 6 304 481 297 471 1.65e-11 67.0
MsG0580027127.01.T01 MTR_5g009110 26.471 204 121 6 301 478 338 538 1.80e-11 67.0
MsG0580027127.01.T01 MTR_7g028020 20.690 406 288 11 97 471 57 459 2.58e-11 66.2
MsG0580027127.01.T01 MTR_4g119660 21.612 546 319 24 37 507 4 515 2.68e-11 66.2
MsG0580027127.01.T01 MTR_7g027960 21.078 408 284 12 97 471 57 459 6.89e-11 65.1
MsG0580027127.01.T01 MTR_8g469360 22.888 367 231 14 147 480 48 395 7.67e-11 64.7
MsG0580027127.01.T01 MTR_3g080580 21.053 475 316 21 81 510 60 520 7.84e-11 64.7
MsG0580027127.01.T01 MTR_4g025980 28.125 192 129 5 292 481 279 463 8.82e-11 64.7
MsG0580027127.01.T01 MTR_4g113650 30.488 164 106 5 310 471 324 481 9.03e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027127.01.T01 AT1G73340 70.146 479 130 3 33 510 17 483 0.0 719
MsG0580027127.01.T01 AT3G50660 32.371 485 291 5 57 506 29 511 6.88e-104 321
MsG0580027127.01.T01 AT5G05690 34.459 444 282 4 67 507 31 468 2.37e-97 303
MsG0580027127.01.T01 AT3G13730 32.739 449 286 6 66 506 50 490 2.39e-96 301
MsG0580027127.01.T01 AT4G36380 32.819 454 288 7 67 510 69 515 1.62e-93 295
MsG0580027127.01.T01 AT3G13730 33.175 422 267 5 66 479 50 464 3.51e-93 291
MsG0580027127.01.T01 AT5G14400 35.613 424 236 8 73 488 2 396 4.93e-87 274
MsG0580027127.01.T01 AT3G50660 32.426 404 245 3 57 432 29 432 1.67e-86 274
MsG0580027127.01.T01 AT5G14400 35.096 416 234 7 73 480 2 389 1.37e-84 267
MsG0580027127.01.T01 AT1G12740 30.977 481 315 6 36 509 2 472 7.07e-83 265
MsG0580027127.01.T01 AT1G12740 30.801 487 314 7 36 509 2 478 8.72e-81 260
MsG0580027127.01.T01 AT1G12740 30.801 487 314 7 36 509 2 478 1.36e-80 259
MsG0580027127.01.T01 AT3G30180 30.786 471 301 7 37 502 10 460 3.33e-80 258
MsG0580027127.01.T01 AT5G05690 34.048 373 241 3 67 436 31 401 1.20e-77 249
MsG0580027127.01.T01 AT5G38970 30.998 471 300 8 37 502 10 460 1.77e-76 248
MsG0580027127.01.T01 AT4G19230 29.645 479 310 10 39 507 1 462 4.55e-72 237
MsG0580027127.01.T01 AT5G14400 35.135 370 203 8 127 488 2 342 3.49e-71 231
MsG0580027127.01.T01 AT4G19230 29.935 461 297 9 39 490 1 444 8.19e-71 234
MsG0580027127.01.T01 AT5G45340 29.167 480 318 10 31 507 2 462 1.77e-70 233
MsG0580027127.01.T01 AT5G45340 29.004 462 307 9 31 490 2 444 1.63e-68 227
MsG0580027127.01.T01 AT3G19270 29.258 458 297 10 32 481 1 439 4.08e-68 226
MsG0580027127.01.T01 AT3G19270 29.295 454 300 9 32 480 1 438 3.36e-67 223
MsG0580027127.01.T01 AT5G38970 30.769 390 256 4 121 505 2 382 3.93e-65 216
MsG0580027127.01.T01 AT5G38970 30.769 390 256 4 121 505 2 382 3.93e-65 216
MsG0580027127.01.T01 AT5G05690 31.268 355 235 4 156 507 1 349 4.33e-65 215
MsG0580027127.01.T01 AT5G14400 34.043 329 208 4 73 394 2 328 1.02e-63 211
MsG0580027127.01.T01 AT2G29090 27.964 447 301 8 66 505 48 480 7.74e-63 213
MsG0580027127.01.T01 AT2G29090 27.964 447 301 8 66 505 48 480 7.74e-63 213
MsG0580027127.01.T01 AT1G55940 25.820 488 343 8 32 506 10 491 4.07e-61 209
MsG0580027127.01.T01 AT4G36380 30.769 338 224 3 67 395 69 405 1.44e-60 205
MsG0580027127.01.T01 AT1G55940 26.522 460 319 8 32 478 10 463 1.96e-60 206
MsG0580027127.01.T01 AT2G32440 28.105 459 305 10 36 479 10 458 1.26e-58 202
MsG0580027127.01.T01 AT2G32440 28.105 459 305 10 36 479 10 458 1.26e-58 202
MsG0580027127.01.T01 AT5G38970 29.250 400 264 6 37 431 10 395 4.99e-57 196
MsG0580027127.01.T01 AT3G44970 28.571 455 306 7 62 506 30 475 8.16e-57 197
MsG0580027127.01.T01 AT1G05160 26.106 452 312 9 67 506 45 486 3.07e-56 196
MsG0580027127.01.T01 AT1G05160 26.106 452 312 9 67 506 45 486 3.07e-56 196
MsG0580027127.01.T01 AT4G15300 27.009 448 311 9 37 480 8 443 2.75e-55 192
MsG0580027127.01.T01 AT1G65670 26.667 450 306 9 37 480 8 439 7.24e-55 192
MsG0580027127.01.T01 AT4G15300 26.966 445 309 9 40 480 1 433 1.32e-54 191
MsG0580027127.01.T01 AT1G19630 26.915 483 326 12 37 507 8 475 3.00e-54 190
MsG0580027127.01.T01 AT4G15393 26.407 462 316 10 39 488 1 450 9.12e-54 188
MsG0580027127.01.T01 AT4G15396 25.966 466 321 9 31 488 3 452 1.04e-53 188
MsG0580027127.01.T01 AT2G29090 27.226 393 269 7 120 505 3 385 4.04e-53 184
MsG0580027127.01.T01 AT1G12740 29.532 342 235 4 62 398 26 366 1.12e-52 182
MsG0580027127.01.T01 AT4G15396 25.983 458 315 9 31 480 3 444 3.58e-52 184
MsG0580027127.01.T01 AT5G36110 27.842 431 291 8 63 483 30 450 7.08e-52 184
MsG0580027127.01.T01 AT2G42850 28.738 428 286 7 67 486 45 461 1.16e-50 181
MsG0580027127.01.T01 AT1G19630 26.374 455 314 10 37 483 8 449 2.83e-50 179
MsG0580027127.01.T01 AT1G78490 28.176 433 300 8 62 488 30 457 1.00e-49 178
MsG0580027127.01.T01 AT5G48000 27.093 454 308 9 65 506 33 475 4.08e-49 176
MsG0580027127.01.T01 AT5G48000 27.093 454 308 9 65 506 33 475 4.08e-49 176
MsG0580027127.01.T01 AT5G48000 27.093 454 308 9 65 506 33 475 4.08e-49 176
MsG0580027127.01.T01 AT5G48000 27.093 454 308 9 65 506 33 475 4.08e-49 176
MsG0580027127.01.T01 AT5G48000 27.093 454 308 9 65 506 33 475 4.08e-49 176
MsG0580027127.01.T01 AT5G48000 27.093 454 308 9 65 506 33 475 4.08e-49 176
MsG0580027127.01.T01 AT5G48000 27.133 457 310 9 62 506 71 516 1.21e-48 176
MsG0580027127.01.T01 AT4G15396 24.893 466 305 9 31 488 3 431 4.44e-47 170
MsG0580027127.01.T01 AT4G15300 25.696 467 309 11 40 480 1 455 7.89e-47 170
MsG0580027127.01.T01 AT4G15310 27.571 457 301 13 38 480 6 446 3.95e-44 162
MsG0580027127.01.T01 AT3G30290 26.992 389 263 8 105 485 3 378 2.15e-42 156
MsG0580027127.01.T01 AT4G15396 25.000 408 287 7 31 430 3 399 3.20e-42 155
MsG0580027127.01.T01 AT4G15393 25.248 404 283 8 39 430 1 397 4.70e-42 155
MsG0580027127.01.T01 AT1G19630 25.124 402 288 8 37 430 8 404 5.45e-40 150
MsG0580027127.01.T01 AT1G78490 26.400 375 270 5 62 430 30 404 2.16e-37 142
MsG0580027127.01.T01 AT4G15393 24.257 404 254 8 39 430 1 364 1.20e-35 137
MsG0580027127.01.T01 AT5G36110 26.879 346 240 6 67 402 34 376 2.30e-35 136
MsG0580027127.01.T01 AT2G42850 29.070 344 233 6 67 402 45 385 2.71e-35 136
MsG0580027127.01.T01 AT2G29090 25.540 278 199 4 66 340 48 320 7.43e-29 117
MsG0580027127.01.T01 AT5G36140 25.263 285 198 4 67 342 33 311 5.03e-27 111
MsG0580027127.01.T01 AT3G10560 24.468 470 315 16 44 480 18 480 5.60e-24 105
MsG0580027127.01.T01 AT3G44970 23.824 319 229 5 62 370 30 344 1.86e-22 99.4
MsG0580027127.01.T01 AT1G74550 23.830 470 306 15 39 480 3 448 3.11e-22 100
MsG0580027127.01.T01 AT2G45550 21.548 478 329 12 38 481 9 474 1.12e-21 98.6
MsG0580027127.01.T01 AT5G57220 23.899 477 305 19 40 483 4 455 4.38e-21 96.7
MsG0580027127.01.T01 AT4G37430 23.154 501 314 18 39 496 5 477 6.18e-21 96.3
MsG0580027127.01.T01 AT4G37400 24.703 421 280 14 92 483 49 461 1.06e-19 92.4
MsG0580027127.01.T01 AT5G04630 21.398 472 331 14 40 480 14 476 1.25e-19 92.4
MsG0580027127.01.T01 AT4G37410 24.029 412 274 14 103 485 62 463 3.03e-19 91.3
MsG0580027127.01.T01 AT2G45560 20.971 453 310 14 67 484 38 477 7.05e-19 90.1
MsG0580027127.01.T01 AT4G37370 25.448 279 180 9 222 486 198 462 5.23e-18 87.4
MsG0580027127.01.T01 AT1G74540 28.218 202 134 5 284 480 259 454 6.03e-18 87.0
MsG0580027127.01.T01 AT2G45580 27.660 188 127 4 296 481 141 321 6.25e-18 85.9
MsG0580027127.01.T01 AT2G45580 27.660 188 127 4 296 481 295 475 1.16e-17 86.3
MsG0580027127.01.T01 AT3G48520 22.763 514 330 22 37 507 10 499 1.51e-17 85.9
MsG0580027127.01.T01 AT2G28860 20.190 421 301 13 111 507 79 488 1.52e-17 85.9
MsG0580027127.01.T01 AT3G28740 28.079 203 133 5 295 495 289 480 1.67e-17 85.9
MsG0580027127.01.T01 AT5G67310 23.158 475 314 16 40 482 15 470 2.33e-17 85.5
MsG0580027127.01.T01 AT5G07990 22.947 475 327 14 38 481 3 469 3.21e-17 84.7
MsG0580027127.01.T01 AT3G26270 23.830 470 305 20 53 485 20 473 3.56e-17 84.7
MsG0580027127.01.T01 AT2G34490 22.716 405 245 14 145 507 114 492 4.26e-17 84.3
MsG0580027127.01.T01 AT2G45570 21.176 425 295 9 91 481 57 475 9.16e-17 83.6
MsG0580027127.01.T01 AT1G11680 22.907 454 321 12 41 478 14 454 1.15e-16 83.2
MsG0580027127.01.T01 AT4G15380 27.948 229 153 5 263 485 256 478 1.49e-16 82.8
MsG0580027127.01.T01 AT2G28850 19.906 427 295 13 111 507 79 488 3.98e-16 81.3
MsG0580027127.01.T01 AT4G37360 28.042 189 125 4 301 488 287 465 4.77e-16 81.3
MsG0580027127.01.T01 AT1G31800 26.027 219 153 4 293 507 356 569 5.89e-16 81.3
MsG0580027127.01.T01 AT1G33730 28.042 189 128 4 295 481 156 338 6.77e-16 79.7
MsG0580027127.01.T01 AT1G33730 28.042 189 128 4 295 481 156 338 6.77e-16 79.7
MsG0580027127.01.T01 AT4G12300 21.946 483 310 16 42 481 20 478 7.82e-16 80.5
MsG0580027127.01.T01 AT3G26170 30.570 193 120 6 296 481 283 468 8.43e-16 80.5
MsG0580027127.01.T01 AT4G13770 20.705 454 320 11 41 463 4 448 1.55e-15 79.7
MsG0580027127.01.T01 AT2G40890 21.784 482 319 17 35 480 2 461 1.60e-15 79.7
MsG0580027127.01.T01 AT3G25180 21.983 464 286 16 99 509 68 508 1.63e-15 79.7
MsG0580027127.01.T01 AT3G20950 21.063 489 321 14 38 481 14 482 1.65e-15 79.7
MsG0580027127.01.T01 AT3G26230 29.474 190 124 4 302 487 289 472 2.08e-15 79.3
MsG0580027127.01.T01 AT3G48300 21.245 466 306 20 56 486 19 458 2.24e-15 79.0
MsG0580027127.01.T01 AT3G48300 21.245 466 306 20 56 486 21 460 2.26e-15 79.0
MsG0580027127.01.T01 AT1G66540 26.042 192 129 5 301 490 115 295 2.56e-15 77.4
MsG0580027127.01.T01 AT3G26180 26.562 256 152 9 230 481 111 334 2.86e-15 77.8
MsG0580027127.01.T01 AT2G42250 28.415 183 122 3 307 483 303 482 2.99e-15 79.0
MsG0580027127.01.T01 AT1G66540 26.042 192 129 5 301 490 174 354 3.34e-15 77.8
MsG0580027127.01.T01 AT3G10570 20.525 419 295 11 94 480 68 480 3.41e-15 78.6
MsG0580027127.01.T01 AT2G26710 21.600 500 324 17 30 478 2 484 5.31e-15 78.2
MsG0580027127.01.T01 AT4G37310 20.412 485 329 13 38 482 4 471 8.22e-15 77.4
MsG0580027127.01.T01 AT3G48280 20.356 506 332 22 37 502 1 475 8.31e-15 77.4
MsG0580027127.01.T01 AT5G04660 21.241 419 293 11 94 480 66 479 8.62e-15 77.4
MsG0580027127.01.T01 AT3G48320 23.045 486 301 22 37 486 12 460 8.69e-15 77.4
MsG0580027127.01.T01 AT5G35715 25.000 276 188 7 217 480 134 402 1.41e-14 76.3
MsG0580027127.01.T01 AT3G26150 30.435 184 117 5 302 481 292 468 1.45e-14 76.6
MsG0580027127.01.T01 AT5G04330 27.778 180 119 4 302 475 295 469 1.49e-14 76.6
MsG0580027127.01.T01 AT5G25180 22.642 477 296 17 49 481 13 460 1.52e-14 76.6
MsG0580027127.01.T01 AT3G01900 21.522 460 307 17 81 507 52 490 1.53e-14 76.6
MsG0580027127.01.T01 AT5G36130 30.496 141 89 3 364 502 1 134 1.96e-14 70.9
MsG0580027127.01.T01 AT1G33720 20.961 458 320 9 56 481 27 474 2.25e-14 75.9
MsG0580027127.01.T01 AT3G26180 26.667 255 151 9 231 481 246 468 2.43e-14 75.9
MsG0580027127.01.T01 AT5G10600 27.320 194 133 3 301 493 302 488 2.68e-14 75.9
MsG0580027127.01.T01 AT4G36220 27.027 185 127 4 299 481 304 482 3.28e-14 75.5
MsG0580027127.01.T01 AT4G15360 26.203 187 132 4 304 489 301 482 3.74e-14 75.5
MsG0580027127.01.T01 AT5G42580 25.556 180 130 2 304 481 286 463 4.47e-14 75.1
MsG0580027127.01.T01 AT1G33720 26.596 188 132 3 295 481 160 342 4.77e-14 74.3
MsG0580027127.01.T01 AT1G33720 26.596 188 132 3 295 481 160 342 4.77e-14 74.3
MsG0580027127.01.T01 AT1G33720 26.596 188 132 3 295 481 160 342 4.77e-14 74.3
MsG0580027127.01.T01 AT3G32047 24.876 201 144 3 296 494 292 487 7.46e-14 74.3
MsG0580027127.01.T01 AT5G10610 27.500 200 135 5 295 492 280 471 8.70e-14 74.3
MsG0580027127.01.T01 AT4G31940 32.370 173 106 6 309 474 316 484 1.35e-13 73.6
MsG0580027127.01.T01 AT4G31950 32.370 173 106 6 309 474 304 472 1.48e-13 73.6
MsG0580027127.01.T01 AT2G14100 25.532 188 134 2 296 481 294 477 1.53e-13 73.6
MsG0580027127.01.T01 AT3G20080 26.842 190 132 4 304 490 165 350 1.91e-13 72.4
MsG0580027127.01.T01 AT3G20080 26.842 190 132 4 304 490 165 350 1.91e-13 72.4
MsG0580027127.01.T01 AT3G20080 26.842 190 132 4 304 490 165 350 1.91e-13 72.4
MsG0580027127.01.T01 AT3G20080 26.842 190 132 4 304 490 165 350 1.91e-13 72.4
MsG0580027127.01.T01 AT3G20090 26.111 180 128 3 304 481 165 341 1.96e-13 72.4
MsG0580027127.01.T01 AT3G20120 23.810 189 136 3 296 480 156 340 1.97e-13 72.4
MsG0580027127.01.T01 AT3G20120 23.810 189 136 3 296 480 156 340 1.97e-13 72.4
MsG0580027127.01.T01 AT3G20120 23.810 189 136 3 296 480 156 340 1.97e-13 72.4
MsG0580027127.01.T01 AT3G61040 27.404 208 135 6 283 481 263 463 2.33e-13 72.8
MsG0580027127.01.T01 AT3G20120 23.858 197 141 4 296 488 292 483 2.81e-13 72.4
MsG0580027127.01.T01 AT5G25120 19.583 480 329 16 36 481 4 460 3.10e-13 72.4
MsG0580027127.01.T01 AT3G20080 26.984 189 131 4 304 489 302 486 4.08e-13 72.0
MsG0580027127.01.T01 AT3G20080 26.984 189 131 4 304 489 302 486 4.08e-13 72.0
MsG0580027127.01.T01 AT2G30770 23.312 459 280 16 67 481 33 463 5.42e-13 71.6
MsG0580027127.01.T01 AT3G20090 25.532 188 135 3 296 481 295 479 5.81e-13 71.6
MsG0580027127.01.T01 AT3G26160 28.916 166 107 5 302 463 292 450 6.20e-13 71.6
MsG0580027127.01.T01 AT3G48310 20.645 465 307 18 56 485 23 460 6.41e-13 71.2
MsG0580027127.01.T01 AT5G06905 19.748 476 328 13 67 500 31 494 8.28e-13 71.2
MsG0580027127.01.T01 AT1G13080 24.503 302 184 11 207 480 64 349 9.59e-13 70.5
MsG0580027127.01.T01 AT3G20960 25.843 178 129 2 304 480 198 373 9.95e-13 70.5
MsG0580027127.01.T01 AT3G20960 23.874 222 160 4 263 480 260 476 1.05e-12 70.9
MsG0580027127.01.T01 AT1G13110 21.951 492 310 21 38 480 3 469 1.44e-12 70.5
MsG0580027127.01.T01 AT2G34500 21.708 281 197 7 242 507 215 487 1.45e-12 70.5
MsG0580027127.01.T01 AT5G24900 27.273 176 121 3 304 478 210 379 1.66e-12 69.7
MsG0580027127.01.T01 AT3G20940 23.333 180 134 2 304 481 302 479 1.84e-12 70.1
MsG0580027127.01.T01 AT1G64930 25.907 193 137 3 295 484 292 481 2.06e-12 69.7
MsG0580027127.01.T01 AT1G13080 26.776 183 123 5 302 480 292 467 2.39e-12 69.7
MsG0580027127.01.T01 AT5G24900 27.273 176 121 3 304 478 327 496 2.53e-12 69.7
MsG0580027127.01.T01 AT1G13090 25.121 207 139 6 302 504 288 482 2.75e-12 69.3
MsG0580027127.01.T01 AT4G13310 27.807 187 124 6 299 481 285 464 3.33e-12 69.3
MsG0580027127.01.T01 AT5G24910 26.705 176 122 3 304 478 332 501 4.19e-12 68.9
MsG0580027127.01.T01 AT3G26830 25.000 204 137 6 302 501 288 479 4.42e-12 68.9
MsG0580027127.01.T01 AT1G24540 20.909 440 298 16 113 507 86 520 5.35e-12 68.6
MsG0580027127.01.T01 AT2G46950 22.693 401 275 12 120 492 166 559 5.87e-12 68.6
MsG0580027127.01.T01 AT2G23190 26.804 194 129 5 295 486 325 507 6.86e-12 68.2
MsG0580027127.01.T01 AT3G56630 20.988 405 262 16 117 476 77 468 8.35e-12 67.8
MsG0580027127.01.T01 AT1G28430 23.661 224 164 3 263 481 255 476 8.89e-12 67.8
MsG0580027127.01.T01 AT5G24950 28.492 179 119 6 307 481 290 463 1.93e-11 66.6
MsG0580027127.01.T01 AT2G25160 26.131 199 130 7 289 474 285 479 2.36e-11 66.6
MsG0580027127.01.T01 AT1G34540 24.348 230 163 6 270 489 253 481 4.96e-11 65.5
MsG0580027127.01.T01 AT2G12190 23.438 256 177 5 265 508 252 500 5.23e-11 65.5
MsG0580027127.01.T01 AT3G61880 21.206 481 332 16 69 514 68 536 7.76e-11 65.1
MsG0580027127.01.T01 AT3G61880 21.719 442 304 15 69 480 68 497 9.69e-11 64.7

Find 88 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATGGTTAATCAATTATT+AGG 0.133686 5:+54096103 MsG0580027127.01.T01:CDS
ACCAAATCTCTAAAAGATTT+TGG 0.137226 5:-54095771 None:intergenic
CATGCAGCCTATTTGGAAAA+TGG 0.161543 5:+54095673 MsG0580027127.01.T01:CDS
GATTCTCTAAGGACTAATTT+TGG 0.206125 5:+54097506 MsG0580027127.01.T01:CDS
ATTACTTTGTTACAAATTAT+AGG 0.221777 5:+54098815 MsG0580027127.01.T01:CDS
TCACTTACACATTGAGTAAA+TGG 0.222600 5:-54097566 None:intergenic
TAATGGTTAATCAATTATTA+GGG 0.226315 5:+54096104 MsG0580027127.01.T01:CDS
GCAGGTAGCTATAAATTTAA+TGG 0.250391 5:+54096087 MsG0580027127.01.T01:intron
CCTCCAAAGGGTGCATAAAA+TGG 0.261752 5:-54098733 None:intergenic
ATCATCAATCTTCTATTTGC+TGG 0.284436 5:+54097046 MsG0580027127.01.T01:CDS
GACTTGGTGGCATTGCAATT+TGG 0.310036 5:+54097773 MsG0580027127.01.T01:CDS
TTATGAAGGAAAAGAGAAAT+TGG 0.313753 5:+54098701 MsG0580027127.01.T01:intron
AGAAGCTGCTCCATGGCATT+AGG 0.323140 5:-54097124 None:intergenic
TCCTCAATTTGTTGAAGAAA+TGG 0.332131 5:+54095163 MsG0580027127.01.T01:CDS
TAATGCCATGGAGCAGCTTC+TGG 0.337920 5:+54097126 MsG0580027127.01.T01:CDS
TTTGTATATCATTCATGAAA+TGG 0.354787 5:-54095887 None:intergenic
AAAGGCCAACCTCTCCTTCC+TGG 0.360202 5:-54095092 None:intergenic
CTTATCTAATCGCATCATAT+TGG 0.360450 5:-54095856 None:intergenic
GGAACCACAAAACATCCTTT+TGG 0.377881 5:-54098506 None:intergenic
CTTGGAGAAGAATGACTTGT+TGG 0.378677 5:-54095944 None:intergenic
CCCTCAGCTCGGTTAGTGAA+TGG 0.382876 5:+54099185 MsG0580027127.01.T01:CDS
TTCTCTTGGACAGGATGAAC+AGG 0.393722 5:+54097484 MsG0580027127.01.T01:intron
AGGAGAGGTTGGCCTTTGAT+AGG 0.397236 5:+54095098 MsG0580027127.01.T01:CDS
GGAAACAAATGAAGGAAGAT+AGG 0.406930 5:+54099150 MsG0580027127.01.T01:CDS
TTACCTTTCTACAAACATCT+TGG 0.410837 5:-54095962 None:intergenic
AAATGAACTGCTGAGAGAAA+TGG 0.418616 5:-54098527 None:intergenic
TCTCCAAGATGTTTGTAGAA+AGG 0.429524 5:+54095959 MsG0580027127.01.T01:CDS
ATGCAGCCTATTTGGAAAAT+GGG 0.433237 5:+54095674 MsG0580027127.01.T01:CDS
GAAGCTGCTCCATGGCATTA+GGG 0.436799 5:-54097123 None:intergenic
ACCATTTCTTCAACAAATTG+AGG 0.439675 5:-54095164 None:intergenic
CCTCCAACAGAAGGTAATAA+TGG 0.446668 5:+54096965 MsG0580027127.01.T01:CDS
ACTTCATCAGCAAAACCATA+AGG 0.454277 5:+54094349 MsG0580027127.01.T01:CDS
CCATTATTACCTTCTGTTGG+AGG 0.456644 5:-54096965 None:intergenic
ATAGAGGTCCAGAGACAAAA+TGG 0.470328 5:+54096941 MsG0580027127.01.T01:CDS
TGGCATTAGGGCATTGAGTA+AGG 0.483044 5:-54097111 None:intergenic
AAAATTTCAATCCTTGGAGA+TGG 0.483860 5:+54098576 MsG0580027127.01.T01:CDS
TTCATACCACACTGCTATGA+AGG 0.485579 5:+54096219 MsG0580027127.01.T01:CDS
AAGTCTGCAACAGCATCATC+TGG 0.488461 5:-54097022 None:intergenic
AGGATGAACAGGATTCTCTA+AGG 0.491747 5:+54097495 MsG0580027127.01.T01:intron
ACACCATTATTACCTTCTGT+TGG 0.494158 5:-54096968 None:intergenic
AGAAGAATTTCTTACATGGC+AGG 0.496254 5:+54097529 MsG0580027127.01.T01:CDS
AATGGCGTGATTACAGTTCA+AGG 0.497135 5:+54095801 MsG0580027127.01.T01:CDS
GAAGGTAATAATGGTGTACT+TGG 0.498281 5:+54096974 MsG0580027127.01.T01:CDS
TGATAGGTGACAGTATCAAT+TGG 0.505310 5:+54095114 MsG0580027127.01.T01:CDS
TGAAGAGCCAGGGATGTTGA+TGG 0.506248 5:-54096200 None:intergenic
TTTCAATCCTTGGAGATGGA+TGG 0.506285 5:+54098580 MsG0580027127.01.T01:CDS
CGAGTCTCAAGTGAATGAAA+TGG 0.507305 5:+54096135 MsG0580027127.01.T01:CDS
AAGTAATTCAAATCAAGAAA+AGG 0.511104 5:+54095039 MsG0580027127.01.T01:CDS
TGCCACCAGGAAGGAGAGGT+TGG 0.529134 5:+54095087 MsG0580027127.01.T01:CDS
GATGAAACACTTAGACTTGG+TGG 0.531512 5:+54097760 MsG0580027127.01.T01:CDS
AGCAGTTCATTTAGATGAGA+AGG 0.532092 5:+54098538 MsG0580027127.01.T01:CDS
TCCGTTCCCATCAACATCCC+TGG 0.534317 5:+54096193 MsG0580027127.01.T01:CDS
GCAGTGTGGTATGAAGAGCC+AGG 0.536000 5:-54096211 None:intergenic
TGTACTTGGAAGACTAATAG+AGG 0.536543 5:+54096988 MsG0580027127.01.T01:CDS
TACTCAATGCCCTAATGCCA+TGG 0.545078 5:+54097114 MsG0580027127.01.T01:CDS
AAATCTAGCACCTCCTCCAA+AGG 0.546715 5:-54098746 None:intergenic
ATGGATGGAACCTGAAAATG+AGG 0.553125 5:+54098595 MsG0580027127.01.T01:CDS
CAACAGATGGAAACAAATGA+AGG 0.553269 5:+54099142 MsG0580027127.01.T01:intron
AGGAAGGAAGATAAAAGCAT+AGG 0.554052 5:+54095059 MsG0580027127.01.T01:CDS
AGGCGAGCTAGTTCAGCTCC+AGG 0.561941 5:-54098772 None:intergenic
GAGAAAATATTTCAGAAACA+TGG 0.568818 5:+54094973 MsG0580027127.01.T01:CDS
AATCTAGCACCTCCTCCAAA+GGG 0.570397 5:-54098745 None:intergenic
CCATTCACTAACCGAGCTGA+GGG 0.577408 5:-54099185 None:intergenic
CAGTTCAAGGAGAGCAACAA+AGG 0.577934 5:+54095814 MsG0580027127.01.T01:CDS
TCAGGTTCCATCCATCTCCA+AGG 0.578285 5:-54098587 None:intergenic
TTGGAGAAGAATTTCTTACA+TGG 0.579059 5:+54097525 MsG0580027127.01.T01:CDS
GCCAGGGATGTTGATGGGAA+CGG 0.581255 5:-54096194 None:intergenic
GAAGAGCCAGGGATGTTGAT+GGG 0.585544 5:-54096199 None:intergenic
GCCATTCACTAACCGAGCTG+AGG 0.588963 5:-54099186 None:intergenic
AGATTGCCACCAGGAAGGAG+AGG 0.600467 5:+54095083 MsG0580027127.01.T01:CDS
ATTACAAAACGATTGAAGCT+CGG 0.600491 5:-54095714 None:intergenic
GAGCAACAAAGGAAACTACA+TGG 0.605256 5:+54095825 MsG0580027127.01.T01:CDS
CAAAATGGTCCTCCAACAGA+AGG 0.615753 5:+54096956 MsG0580027127.01.T01:CDS
TTGATACTGTCACCTATCAA+AGG 0.616128 5:-54095110 None:intergenic
ATTTCTTCAACAAATTGAGG+AGG 0.616451 5:-54095161 None:intergenic
CCTATTTGGAAAATGGGCAG+TGG 0.617335 5:+54095680 MsG0580027127.01.T01:CDS
ATTGATGAAACACTTAGACT+TGG 0.618756 5:+54097757 MsG0580027127.01.T01:CDS
TAAAATAAACAAGATCATAG+AGG 0.623444 5:+54096925 MsG0580027127.01.T01:CDS
AATTCAAATCAAGAAAAGGA+AGG 0.625285 5:+54095043 MsG0580027127.01.T01:CDS
ACATACCAGAAGCTGCTCCA+TGG 0.626766 5:-54097131 None:intergenic
TAGGAAGATTGCCACCAGGA+AGG 0.629546 5:+54095078 MsG0580027127.01.T01:CDS
CAGTGTGGTATGAAGAGCCA+GGG 0.630530 5:-54096210 None:intergenic
TTGTTGAAGAAATGGTGCAA+AGG 0.636433 5:+54095171 MsG0580027127.01.T01:CDS
AGCATAGGAAGATTGCCACC+AGG 0.646312 5:+54095074 MsG0580027127.01.T01:CDS
AATGGTTAATCAATTATTAG+GGG 0.656479 5:+54096105 MsG0580027127.01.T01:CDS
AAAGAAGACATTCAATACCA+AGG 0.657807 5:+54097811 MsG0580027127.01.T01:CDS
GGCCAACCTCTCCTTCCTGG+TGG 0.718998 5:-54095089 None:intergenic
ATCGTACCTTCATAGCAGTG+TGG 0.752782 5:-54096225 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTATAATATTAATC+AGG - Chr5:54098305-54098324 None:intergenic 10.0%
!! TAATGAGTAAATATATAATT+TGG - Chr5:54098387-54098406 None:intergenic 10.0%
!! TTAAATTAAATGAAAAAAGT+TGG - Chr5:54094643-54094662 None:intergenic 10.0%
!! AATATGTAGTTAATTATGTT+TGG - Chr5:54098998-54099017 None:intergenic 15.0%
!! ATTACTTTGTTACAAATTAT+AGG + Chr5:54098815-54098834 MsG0580027127.01.T01:CDS 15.0%
!! TAAAAGAATTTATATGTAAC+TGG - Chr5:54094795-54094814 None:intergenic 15.0%
!! TAATGGTTAATCAATTATTA+GGG + Chr5:54096104-54096123 MsG0580027127.01.T01:CDS 15.0%
!! TTAATGGTTAATCAATTATT+AGG + Chr5:54096103-54096122 MsG0580027127.01.T01:CDS 15.0%
!!! AATTGTTTTCTTAATTGTTA+TGG + Chr5:54098672-54098691 MsG0580027127.01.T01:intron 15.0%
!!! GCAATTTTAAAGATAATTTT+GGG + Chr5:54095309-54095328 MsG0580027127.01.T01:intron 15.0%
!!! TGCAATTTTAAAGATAATTT+TGG + Chr5:54095308-54095327 MsG0580027127.01.T01:intron 15.0%
!! AAATGTTGTTAGAAAGTAAA+TGG - Chr5:54095992-54096011 None:intergenic 20.0%
!! AAGTAATTCAAATCAAGAAA+AGG + Chr5:54095039-54095058 MsG0580027127.01.T01:CDS 20.0%
!! AATGGTTAATCAATTATTAG+GGG + Chr5:54096105-54096124 MsG0580027127.01.T01:CDS 20.0%
!! ACGTGTTAATTAAATTACTT+AGG + Chr5:54096828-54096847 MsG0580027127.01.T01:intron 20.0%
!! ATTTCTATTTCGTAAATTTG+AGG - Chr5:54096554-54096573 None:intergenic 20.0%
!! TAAAATAAACAAGATCATAG+AGG + Chr5:54096925-54096944 MsG0580027127.01.T01:CDS 20.0%
!! TCTTTGATTGTTATGTTAAT+CGG + Chr5:54096766-54096785 MsG0580027127.01.T01:intron 20.0%
!! TTAATCGGTTAATCTTATAA+GGG + Chr5:54096781-54096800 MsG0580027127.01.T01:intron 20.0%
!! TTATACTTGCATATACTAAT+AGG - Chr5:54097989-54098008 None:intergenic 20.0%
!! TTATTCACTAAAATGTTATG+TGG - Chr5:54098626-54098645 None:intergenic 20.0%
!! TTGAGTAAAAATATACAAGT+TGG + Chr5:54095215-54095234 MsG0580027127.01.T01:intron 20.0%
!! TTGTATAATATTAATCAGGT+CGG - Chr5:54098301-54098320 None:intergenic 20.0%
!! TTTGTATATCATTCATGAAA+TGG - Chr5:54095890-54095909 None:intergenic 20.0%
!!! AAATATTTAATTTCTCTGCA+AGG + Chr5:54094892-54094911 MsG0580027127.01.T01:intron 20.0%
!!! TATTTTTGTAAGTGAGATTA+TGG + Chr5:54094456-54094475 MsG0580027127.01.T01:intron 20.0%
!!! TGATAATGAAAATAACCTTA+TGG - Chr5:54094367-54094386 None:intergenic 20.0%
!!! TTATCATTTTGAAATGTTGT+TGG - Chr5:54098111-54098130 None:intergenic 20.0%
! AAAATCGACAATAATTTGGA+TGG - Chr5:54099034-54099053 None:intergenic 25.0%
! AAGCTAAAAATTTCAATCCT+TGG + Chr5:54098570-54098589 MsG0580027127.01.T01:CDS 25.0%
! AATTCAAATCAAGAAAAGGA+AGG + Chr5:54095043-54095062 MsG0580027127.01.T01:CDS 25.0%
! ACATGAATGAATATCCAATT+TGG + Chr5:54098047-54098066 MsG0580027127.01.T01:intron 25.0%
! ATGTAGTTAATTATGTTTGG+TGG - Chr5:54098995-54099014 None:intergenic 25.0%
! ATTCTAACCATTGTTTATAG+AGG + Chr5:54095430-54095449 MsG0580027127.01.T01:intron 25.0%
! ATTTCTGCAAATAATTCTCT+TGG + Chr5:54097470-54097489 MsG0580027127.01.T01:intron 25.0%
! CAACAAAATCGACAATAATT+TGG - Chr5:54099038-54099057 None:intergenic 25.0%
! CATATAGTTGAAATTGTTGT+AGG + Chr5:54094497-54094516 MsG0580027127.01.T01:intron 25.0%
! CATCGTTAATAATTTGAGAA+CGG + Chr5:54098928-54098947 MsG0580027127.01.T01:intron 25.0%
! CTACTCTCTTTATATATCAT+TGG - Chr5:54096266-54096285 None:intergenic 25.0%
! GAACTATAATGACATTATGT+TGG + Chr5:54098178-54098197 MsG0580027127.01.T01:intron 25.0%
! GAGAAAATATTTCAGAAACA+TGG + Chr5:54094973-54094992 MsG0580027127.01.T01:CDS 25.0%
! GATGACTAATGAATATAACA+AGG - Chr5:54098973-54098992 None:intergenic 25.0%
! GTAAATCATTCAAACATGTT+AGG - Chr5:54099123-54099142 None:intergenic 25.0%
! GTCAATAATCAACATATTAG+TGG - Chr5:54097896-54097915 None:intergenic 25.0%
! GTTAATCGGTTAATCTTATA+AGG + Chr5:54096780-54096799 MsG0580027127.01.T01:intron 25.0%
! TAAATTGATCCTACAATTTC+AGG + Chr5:54098360-54098379 MsG0580027127.01.T01:intron 25.0%
! TAACAGATAAATCTTCCATT+TGG + Chr5:54095628-54095647 MsG0580027127.01.T01:intron 25.0%
! TCAATATGTAACTCTTTCAT+TGG + Chr5:54096686-54096705 MsG0580027127.01.T01:intron 25.0%
! TCTCAAATTATTAACGATGT+CGG - Chr5:54098927-54098946 None:intergenic 25.0%
! TCTCTTAAATAAATCAATGC+TGG + Chr5:54096578-54096597 MsG0580027127.01.T01:intron 25.0%
! TGAAACTAAGAGAATAATGT+CGG + Chr5:54098226-54098245 MsG0580027127.01.T01:intron 25.0%
! TTATGAAGGAAAAGAGAAAT+TGG + Chr5:54098701-54098720 MsG0580027127.01.T01:intron 25.0%
! TTCAAGTACTTCATATAAGA+TGG - Chr5:54096404-54096423 None:intergenic 25.0%
! TTCTAACCATTGTTTATAGA+GGG + Chr5:54095431-54095450 MsG0580027127.01.T01:intron 25.0%
! TTTGAATGATTTACAACAGA+TGG + Chr5:54099129-54099148 MsG0580027127.01.T01:intron 25.0%
!! AATCACATATATCTAAGACT+TGG - Chr5:54094537-54094556 None:intergenic 25.0%
!! AATTTAGTACCACAGTTTTA+AGG + Chr5:54096621-54096640 MsG0580027127.01.T01:intron 25.0%
!! ATGTAAGTTGAAATAACCTA+TGG + Chr5:54097300-54097319 MsG0580027127.01.T01:intron 25.0%
!! GTGTAAGTGATTAACATTTT+TGG + Chr5:54097579-54097598 MsG0580027127.01.T01:intron 25.0%
!! TGGTTAGAATGATTTTTACA+AGG - Chr5:54095420-54095439 None:intergenic 25.0%
!!! AAATCTTTTAGAGATTTGGT+TGG + Chr5:54095774-54095793 MsG0580027127.01.T01:CDS 25.0%
!!! ACCAAATCTCTAAAAGATTT+TGG - Chr5:54095774-54095793 None:intergenic 25.0%
!!! TCCAAAATCTTTTAGAGATT+TGG + Chr5:54095770-54095789 MsG0580027127.01.T01:CDS 25.0%
!!! TGAAATATTGATAATGTGTG+AGG - Chr5:54095272-54095291 None:intergenic 25.0%
AAAATTTCAATCCTTGGAGA+TGG + Chr5:54098576-54098595 MsG0580027127.01.T01:CDS 30.0%
AAACTAAGAGAATAATGTCG+GGG + Chr5:54098228-54098247 MsG0580027127.01.T01:intron 30.0%
AAAGAAGACATTCAATACCA+AGG + Chr5:54097811-54097830 MsG0580027127.01.T01:CDS 30.0%
AATAATTTGGATGGTTAACG+CGG - Chr5:54099025-54099044 None:intergenic 30.0%
AATCAAAGAATCAGCATTTC+AGG - Chr5:54096755-54096774 None:intergenic 30.0%
ACAATGAAACCTTAACAAAC+TGG - Chr5:54097719-54097738 None:intergenic 30.0%
ACCATTTCTTCAACAAATTG+AGG - Chr5:54095167-54095186 None:intergenic 30.0%
ATCATCAATCTTCTATTTGC+TGG + Chr5:54097046-54097065 MsG0580027127.01.T01:CDS 30.0%
ATCATTCAAACATGTTAGGT+AGG - Chr5:54099119-54099138 None:intergenic 30.0%
ATGAATCTTTATGATGTGTG+AGG - Chr5:54094406-54094425 None:intergenic 30.0%
ATGTGTACATGATTTAATGC+AGG + Chr5:54096069-54096088 MsG0580027127.01.T01:intron 30.0%
ATTACAAAACGATTGAAGCT+CGG - Chr5:54095717-54095736 None:intergenic 30.0%
ATTAGAAGACCAAGTTAACA+TGG + Chr5:54094731-54094750 MsG0580027127.01.T01:intron 30.0%
ATTGATGAAACACTTAGACT+TGG + Chr5:54097757-54097776 MsG0580027127.01.T01:CDS 30.0%
ATTTCTTCAACAAATTGAGG+AGG - Chr5:54095164-54095183 None:intergenic 30.0%
CAATTTGGTCATGAAAATGT+TGG + Chr5:54098062-54098081 MsG0580027127.01.T01:intron 30.0%
CTTATCTAATCGCATCATAT+TGG - Chr5:54095859-54095878 None:intergenic 30.0%
GAAAAATCTGTGCCTAATTA+TGG - Chr5:54096454-54096473 None:intergenic 30.0%
GAAACTAAGAGAATAATGTC+GGG + Chr5:54098227-54098246 MsG0580027127.01.T01:intron 30.0%
GAAGAAAAAGAGCAATTTGA+AGG - Chr5:54098795-54098814 None:intergenic 30.0%
GATACAGTTCTATACTTTCA+AGG + Chr5:54095359-54095378 MsG0580027127.01.T01:intron 30.0%
GATATTGATGTGACATTCTT+TGG + Chr5:54096875-54096894 MsG0580027127.01.T01:intron 30.0%
GCAGGTAGCTATAAATTTAA+TGG + Chr5:54096087-54096106 MsG0580027127.01.T01:intron 30.0%
GTGCTTAAAATTGTAAGAGT+TGG + Chr5:54096517-54096536 MsG0580027127.01.T01:intron 30.0%
GTGGTACTAAATTCAGAAAA+AGG - Chr5:54096614-54096633 None:intergenic 30.0%
TAATTTGGTCCTGAAATTGT+AGG - Chr5:54098372-54098391 None:intergenic 30.0%
TCACTTACACATTGAGTAAA+TGG - Chr5:54097569-54097588 None:intergenic 30.0%
TCATATAAGATGGTTCTTGA+AGG - Chr5:54096394-54096413 None:intergenic 30.0%
TGTTATGGTCTCAATTATGA+AGG + Chr5:54098687-54098706 MsG0580027127.01.T01:intron 30.0%
TTACCTTTCTACAAACATCT+TGG - Chr5:54095965-54095984 None:intergenic 30.0%
TTGCCAAATAGAGATTATAG+CGG + Chr5:54095530-54095549 MsG0580027127.01.T01:intron 30.0%
TTGGAGAAGAATTTCTTACA+TGG + Chr5:54097525-54097544 MsG0580027127.01.T01:CDS 30.0%
TTGTAAGTGAGATTATGGAA+GGG + Chr5:54094461-54094480 MsG0580027127.01.T01:intron 30.0%
TTTATACTCATAGCATATCG+CGG - Chr5:54095507-54095526 None:intergenic 30.0%
TTTGTAAGTGAGATTATGGA+AGG + Chr5:54094460-54094479 MsG0580027127.01.T01:intron 30.0%
! ATAAATCTTCCATTTGGCTT+AGG + Chr5:54095634-54095653 MsG0580027127.01.T01:intron 30.0%
! ATATTTTCATGCAGCCTATT+TGG + Chr5:54095666-54095685 MsG0580027127.01.T01:CDS 30.0%
! CAACATTTTCATGACCAAAT+TGG - Chr5:54098064-54098083 None:intergenic 30.0%
! CGTTTTGTAATGCAAAATGA+AGG + Chr5:54095726-54095745 MsG0580027127.01.T01:CDS 30.0%
! TATACCAAAAGGATGTTTTG+TGG + Chr5:54098502-54098521 MsG0580027127.01.T01:CDS 30.0%
! TTGTTTTCTGATTTTGTCGA+TGG + Chr5:54096163-54096182 MsG0580027127.01.T01:CDS 30.0%
! TTTGAAATGTTGTTGGTGTA+GGG - Chr5:54098104-54098123 None:intergenic 30.0%
!! ACAAAAGAGTGTTAAGAAGT+CGG + Chr5:54096301-54096320 MsG0580027127.01.T01:intron 30.0%
!! AGAGATTTGGTTGGTAAAAA+TGG + Chr5:54095783-54095802 MsG0580027127.01.T01:CDS 30.0%
!! AGGACTAATTTGATAATGCA+AGG + Chr5:54095379-54095398 MsG0580027127.01.T01:intron 30.0%
!! GATTCTCTAAGGACTAATTT+TGG + Chr5:54097506-54097525 MsG0580027127.01.T01:CDS 30.0%
!! GCAGATTTTGTTATACCAAA+AGG + Chr5:54098491-54098510 MsG0580027127.01.T01:intron 30.0%
!! TCCTCAATTTGTTGAAGAAA+TGG + Chr5:54095163-54095182 MsG0580027127.01.T01:CDS 30.0%
!! TCTTCAACTCAATTTTGATG+AGG + Chr5:54097622-54097641 MsG0580027127.01.T01:intron 30.0%
!!! TGCAAAAAGCATTGTTTTTG+TGG - Chr5:54097083-54097102 None:intergenic 30.0%
!!! TTTTGAAATGTTGTTGGTGT+AGG - Chr5:54098105-54098124 None:intergenic 30.0%
AAATGAACTGCTGAGAGAAA+TGG - Chr5:54098530-54098549 None:intergenic 35.0%
AACCATTGTTTATAGAGGGA+GGG + Chr5:54095435-54095454 MsG0580027127.01.T01:intron 35.0%
AAGCACTTGCGAAATTTCTT+GGG - Chr5:54097355-54097374 None:intergenic 35.0%
AATTTGAGAACGGTGGTTAA+TGG + Chr5:54098938-54098957 MsG0580027127.01.T01:intron 35.0%
ACACCATTATTACCTTCTGT+TGG - Chr5:54096971-54096990 None:intergenic 35.0%
ACTCTCAAAATTGTGTACCT+TGG - Chr5:54097831-54097850 None:intergenic 35.0%
ACTTCATCAGCAAAACCATA+AGG + Chr5:54094349-54094368 MsG0580027127.01.T01:CDS 35.0%
AGAAGAATTTCTTACATGGC+AGG + Chr5:54097529-54097548 MsG0580027127.01.T01:CDS 35.0%
AGCAGTTCATTTAGATGAGA+AGG + Chr5:54098538-54098557 MsG0580027127.01.T01:CDS 35.0%
AGCATAGAACCTTAAAACTG+TGG - Chr5:54096633-54096652 None:intergenic 35.0%
ATCCATGCATGAACTGAATA+AGG - Chr5:54097186-54097205 None:intergenic 35.0%
ATGCAGCCTATTTGGAAAAT+GGG + Chr5:54095674-54095693 MsG0580027127.01.T01:CDS 35.0%
CAACAGATGGAAACAAATGA+AGG + Chr5:54099142-54099161 MsG0580027127.01.T01:intron 35.0%
CGTTAATAATTTGAGAACGG+TGG + Chr5:54098931-54098950 MsG0580027127.01.T01:intron 35.0%
GAAGGTAATAATGGTGTACT+TGG + Chr5:54096974-54096993 MsG0580027127.01.T01:CDS 35.0%
GACCTTATGAAGATCTAGTA+GGG - Chr5:54094757-54094776 None:intergenic 35.0%
GGAAACAAATGAAGGAAGAT+AGG + Chr5:54099150-54099169 MsG0580027127.01.T01:CDS 35.0%
TAACACTGCAAGCCATAATT+AGG + Chr5:54096439-54096458 MsG0580027127.01.T01:intron 35.0%
TAACCATTGTTTATAGAGGG+AGG + Chr5:54095434-54095453 MsG0580027127.01.T01:intron 35.0%
TAAGCACTTGCGAAATTTCT+TGG - Chr5:54097356-54097375 None:intergenic 35.0%
TCTCCAAGATGTTTGTAGAA+AGG + Chr5:54095959-54095978 MsG0580027127.01.T01:CDS 35.0%
TGACCTTATGAAGATCTAGT+AGG - Chr5:54094758-54094777 None:intergenic 35.0%
TGATAGGTGACAGTATCAAT+TGG + Chr5:54095114-54095133 MsG0580027127.01.T01:CDS 35.0%
TGCAAATAATTCTCTTGGAC+AGG + Chr5:54097475-54097494 MsG0580027127.01.T01:intron 35.0%
TGTACTTGGAAGACTAATAG+AGG + Chr5:54096988-54097007 MsG0580027127.01.T01:CDS 35.0%
TGTGACATTCTTTGGATATC+AGG + Chr5:54096883-54096902 MsG0580027127.01.T01:intron 35.0%
TTATAGTGTGCTACACAACA+TGG - Chr5:54094874-54094893 None:intergenic 35.0%
TTCCTTATTCAGTTCATGCA+TGG + Chr5:54097181-54097200 MsG0580027127.01.T01:intron 35.0%
TTGATACTGTCACCTATCAA+AGG - Chr5:54095113-54095132 None:intergenic 35.0%
TTGTTGAAGAAATGGTGCAA+AGG + Chr5:54095171-54095190 MsG0580027127.01.T01:CDS 35.0%
TTTCATCAATGACCTGTTAG+TGG - Chr5:54097747-54097766 None:intergenic 35.0%
! AGGAAGGAAGATAAAAGCAT+AGG + Chr5:54095059-54095078 MsG0580027127.01.T01:CDS 35.0%
!! AAGGTACACAATTTTGAGAG+TGG + Chr5:54097830-54097849 MsG0580027127.01.T01:intron 35.0%
!! GCTTGCAGTGTTATTTGAAA+TGG - Chr5:54096432-54096451 None:intergenic 35.0%
!! TGTGGATTAACCTCATTTTC+AGG - Chr5:54098608-54098627 None:intergenic 35.0%
AATCAGATTCGTCTCTCCAT+TGG + Chr5:54098144-54098163 MsG0580027127.01.T01:intron 40.0%
AATGGCGTGATTACAGTTCA+AGG + Chr5:54095801-54095820 MsG0580027127.01.T01:CDS 40.0%
AATTTCTCTGCAAGGTAGAG+AGG + Chr5:54094900-54094919 MsG0580027127.01.T01:intron 40.0%
AGAAAACAGCGTTGTGATTG+TGG - Chr5:54095609-54095628 None:intergenic 40.0%
AGGATGAACAGGATTCTCTA+AGG + Chr5:54097495-54097514 MsG0580027127.01.T01:intron 40.0%
ATAGAGGTCCAGAGACAAAA+TGG + Chr5:54096941-54096960 MsG0580027127.01.T01:CDS 40.0%
ATGGATGGAACCTGAAAATG+AGG + Chr5:54098595-54098614 MsG0580027127.01.T01:CDS 40.0%
CATGCAGCCTATTTGGAAAA+TGG + Chr5:54095673-54095692 MsG0580027127.01.T01:CDS 40.0%
CCATTATTACCTTCTGTTGG+AGG - Chr5:54096968-54096987 None:intergenic 40.0%
CCTCCAACAGAAGGTAATAA+TGG + Chr5:54096965-54096984 MsG0580027127.01.T01:CDS 40.0%
CGAGTCTCAAGTGAATGAAA+TGG + Chr5:54096135-54096154 MsG0580027127.01.T01:CDS 40.0%
CTTACCATACCTAAGCCAAA+TGG - Chr5:54095646-54095665 None:intergenic 40.0%
GAGCAACAAAGGAAACTACA+TGG + Chr5:54095825-54095844 MsG0580027127.01.T01:CDS 40.0%
GATGAAACACTTAGACTTGG+TGG + Chr5:54097760-54097779 MsG0580027127.01.T01:CDS 40.0%
GCAAGTTATGACATGTCCAT+AGG - Chr5:54097319-54097338 None:intergenic 40.0%
TCATTGTGTCTTCCACTAAC+AGG + Chr5:54097732-54097751 MsG0580027127.01.T01:intron 40.0%
TTCATACCACACTGCTATGA+AGG + Chr5:54096219-54096238 MsG0580027127.01.T01:CDS 40.0%
TTTCAATCCTTGGAGATGGA+TGG + Chr5:54098580-54098599 MsG0580027127.01.T01:CDS 40.0%
! AGTCCATTTTATGCACCCTT+TGG + Chr5:54098730-54098749 MsG0580027127.01.T01:CDS 40.0%
! CTTGGAGAAGAATGACTTGT+TGG - Chr5:54095947-54095966 None:intergenic 40.0%
! GGAACCACAAAACATCCTTT+TGG - Chr5:54098509-54098528 None:intergenic 40.0%
! GTGCCGCTATAATCTCTATT+TGG - Chr5:54095536-54095555 None:intergenic 40.0%
! TCTTCCATTTGGCTTAGGTA+TGG + Chr5:54095639-54095658 MsG0580027127.01.T01:intron 40.0%
!! CAGTAGAGACCAGTTTGTTA+AGG + Chr5:54097707-54097726 MsG0580027127.01.T01:intron 40.0%
AAATCTAGCACCTCCTCCAA+AGG - Chr5:54098749-54098768 None:intergenic 45.0%
AAGTCTGCAACAGCATCATC+TGG - Chr5:54097025-54097044 None:intergenic 45.0%
AATCTAGCACCTCCTCCAAA+GGG - Chr5:54098748-54098767 None:intergenic 45.0%
AGTTCGTGCGAATACACCAA+TGG - Chr5:54098163-54098182 None:intergenic 45.0%
ATCAGTATTCGTGTCGTGTC+TGG - Chr5:54098901-54098920 None:intergenic 45.0%
ATCGTACCTTCATAGCAGTG+TGG - Chr5:54096228-54096247 None:intergenic 45.0%
CAAAATGGTCCTCCAACAGA+AGG + Chr5:54096956-54096975 MsG0580027127.01.T01:CDS 45.0%
CAGTTCAAGGAGAGCAACAA+AGG + Chr5:54095814-54095833 MsG0580027127.01.T01:CDS 45.0%
CCTATTTGGAAAATGGGCAG+TGG + Chr5:54095680-54095699 MsG0580027127.01.T01:CDS 45.0%
CTAGTAGGGCCATGTTAACT+TGG - Chr5:54094743-54094762 None:intergenic 45.0%
GGCCCTACTAGATCTTCATA+AGG + Chr5:54094752-54094771 MsG0580027127.01.T01:intron 45.0%
GTCCCTCCCTCTATAAACAA+TGG - Chr5:54095440-54095459 None:intergenic 45.0%
GTGTAGGGACTATGTTGATG+CGG - Chr5:54098089-54098108 None:intergenic 45.0%
TAACCGAGCTGAGGGAAAAA+AGG - Chr5:54099180-54099199 None:intergenic 45.0%
TACTCAATGCCCTAATGCCA+TGG + Chr5:54097114-54097133 MsG0580027127.01.T01:CDS 45.0%
TAGGTCTGCTATGGTCAAGA+GGG - Chr5:54098859-54098878 None:intergenic 45.0%
TGTGCTTCTTAGGTCTGCTA+TGG - Chr5:54098868-54098887 None:intergenic 45.0%
TTAGGTCTGCTATGGTCAAG+AGG - Chr5:54098860-54098879 None:intergenic 45.0%
TTCTCTTGGACAGGATGAAC+AGG + Chr5:54097484-54097503 MsG0580027127.01.T01:intron 45.0%
TTGGGAATGTCGATAATGCG+AGG + Chr5:54095327-54095346 MsG0580027127.01.T01:intron 45.0%
! AGACCTAAGAAGCACAGACA+CGG + Chr5:54098872-54098891 MsG0580027127.01.T01:intron 45.0%
! AGGCACAGATTTTTCTCGTC+TGG + Chr5:54096459-54096478 MsG0580027127.01.T01:intron 45.0%
! CCACTGCCCATTTTCCAAAT+AGG - Chr5:54095683-54095702 None:intergenic 45.0%
! CCATTTTATGCACCCTTTGG+AGG + Chr5:54098733-54098752 MsG0580027127.01.T01:CDS 45.0%
! CCTCCAAAGGGTGCATAAAA+TGG - Chr5:54098736-54098755 None:intergenic 45.0%
! TTGGAGGACCATTTTGTCTC+TGG - Chr5:54096952-54096971 None:intergenic 45.0%
!! GACTTGGTGGCATTGCAATT+TGG + Chr5:54097773-54097792 MsG0580027127.01.T01:CDS 45.0%
!! TGGCATTAGGGCATTGAGTA+AGG - Chr5:54097114-54097133 None:intergenic 45.0%
!! TTTTATGCACCCTTTGGAGG+AGG + Chr5:54098736-54098755 MsG0580027127.01.T01:CDS 45.0%
!!! TGTCCTTTTTTCCCTCAGCT+CGG + Chr5:54099174-54099193 MsG0580027127.01.T01:CDS 45.0%
!! ATATTAATTAAATTTATAGT+TGG + Chr5:54097678-54097697 MsG0580027127.01.T01:intron 5.0%
!! TATTAAACTAAAAAAAAAAT+TGG + Chr5:54094571-54094590 MsG0580027127.01.T01:intron 5.0%
ACATACCAGAAGCTGCTCCA+TGG - Chr5:54097134-54097153 None:intergenic 50.0%
AGAAGCTGCTCCATGGCATT+AGG - Chr5:54097127-54097146 None:intergenic 50.0%
AGCATAGGAAGATTGCCACC+AGG + Chr5:54095074-54095093 MsG0580027127.01.T01:CDS 50.0%
CAGTGTGGTATGAAGAGCCA+GGG - Chr5:54096213-54096232 None:intergenic 50.0%
CCATTCACTAACCGAGCTGA+GGG - Chr5:54099188-54099207 None:intergenic 50.0%
GAAGAGCCAGGGATGTTGAT+GGG - Chr5:54096202-54096221 None:intergenic 50.0%
GAAGCTGCTCCATGGCATTA+GGG - Chr5:54097126-54097145 None:intergenic 50.0%
TAATGCCATGGAGCAGCTTC+TGG + Chr5:54097126-54097145 MsG0580027127.01.T01:CDS 50.0%
TAGGAAGATTGCCACCAGGA+AGG + Chr5:54095078-54095097 MsG0580027127.01.T01:CDS 50.0%
TCAGGTTCCATCCATCTCCA+AGG - Chr5:54098590-54098609 None:intergenic 50.0%
TCTGCTATGGTCAAGAGGGA+GGG - Chr5:54098855-54098874 None:intergenic 50.0%
TGAAGAGCCAGGGATGTTGA+TGG - Chr5:54096203-54096222 None:intergenic 50.0%
TGTCCGTGTCTGTGCTTCTT+AGG - Chr5:54098878-54098897 None:intergenic 50.0%
!! AGGAGAGGTTGGCCTTTGAT+AGG + Chr5:54095098-54095117 MsG0580027127.01.T01:CDS 50.0%
!!! GGAGGTGCTAGATTTTGTCC+TGG + Chr5:54098754-54098773 MsG0580027127.01.T01:CDS 50.0%
AAAGGCCAACCTCTCCTTCC+TGG - Chr5:54095095-54095114 None:intergenic 55.0%
AGATTGCCACCAGGAAGGAG+AGG + Chr5:54095083-54095102 MsG0580027127.01.T01:CDS 55.0%
CCCTCAGCTCGGTTAGTGAA+TGG + Chr5:54099185-54099204 MsG0580027127.01.T01:CDS 55.0%
GCAGTGTGGTATGAAGAGCC+AGG - Chr5:54096214-54096233 None:intergenic 55.0%
GCCATTCACTAACCGAGCTG+AGG - Chr5:54099189-54099208 None:intergenic 55.0%
GTCTGCTATGGTCAAGAGGG+AGG - Chr5:54098856-54098875 None:intergenic 55.0%
TCCGTTCCCATCAACATCCC+TGG + Chr5:54096193-54096212 MsG0580027127.01.T01:CDS 55.0%
! GCCAGGGATGTTGATGGGAA+CGG - Chr5:54096197-54096216 None:intergenic 55.0%
AGGCGAGCTAGTTCAGCTCC+AGG - Chr5:54098775-54098794 None:intergenic 60.0%
GTCAAGAGGGAGGGAGAGAG+AGG - Chr5:54098846-54098865 None:intergenic 60.0%
TGCCACCAGGAAGGAGAGGT+TGG + Chr5:54095087-54095106 MsG0580027127.01.T01:CDS 60.0%
GGCCAACCTCTCCTTCCTGG+TGG - Chr5:54095092-54095111 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 54094341 54099256 54094341 ID=MsG0580027127.01;Name=MsG0580027127.01
Chr5 mRNA 54094341 54099256 54094341 ID=MsG0580027127.01.T01;Parent=MsG0580027127.01;Name=MsG0580027127.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0|0|1|0.88|0.8|10|0|514
Chr5 exon 54094341 54094370 54094341 ID=MsG0580027127.01.T01:exon:40642;Parent=MsG0580027127.01.T01
Chr5 exon 54094918 54095192 54094918 ID=MsG0580027127.01.T01:exon:40641;Parent=MsG0580027127.01.T01
Chr5 exon 54095656 54095980 54095656 ID=MsG0580027127.01.T01:exon:40640;Parent=MsG0580027127.01.T01
Chr5 exon 54096091 54096240 54096091 ID=MsG0580027127.01.T01:exon:40639;Parent=MsG0580027127.01.T01
Chr5 exon 54096905 54097147 54096905 ID=MsG0580027127.01.T01:exon:40638;Parent=MsG0580027127.01.T01
Chr5 exon 54097497 54097580 54097497 ID=MsG0580027127.01.T01:exon:40637;Parent=MsG0580027127.01.T01
Chr5 exon 54097754 54097832 54097754 ID=MsG0580027127.01.T01:exon:40636;Parent=MsG0580027127.01.T01
Chr5 exon 54098495 54098616 54098495 ID=MsG0580027127.01.T01:exon:40635;Parent=MsG0580027127.01.T01
Chr5 exon 54098709 54098836 54098709 ID=MsG0580027127.01.T01:exon:40634;Parent=MsG0580027127.01.T01
Chr5 exon 54099148 54099256 54099148 ID=MsG0580027127.01.T01:exon:40633;Parent=MsG0580027127.01.T01
Chr5 CDS 54094341 54094370 54094341 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54094918 54095192 54094918 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54095656 54095980 54095656 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54096091 54096240 54096091 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54096905 54097147 54096905 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54097497 54097580 54097497 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54097754 54097832 54097754 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54098495 54098616 54098495 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54098709 54098836 54098709 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Chr5 CDS 54099148 54099256 54099148 ID=MsG0580027127.01.T01:cds;Parent=MsG0580027127.01.T01
Gene Sequence

>MsG0580027127.01.T01

ATGTTTTTACTTCATCAGCAAAACCATAAGAGAGGTGTAATAATCTCTTCTTTTTTTTCTCAATTTTATTTGAAACAGAAAATGAGAGAAAATATTTCAGAAACATGGTTAGTGATGATCATTGTGATATTGTTCACTGCAATATTTGCAAAAGTAATTCAAATCAAGAAAAGGAAGGAAGATAAAAGCATAGGAAGATTGCCACCAGGAAGGAGAGGTTGGCCTTTGATAGGTGACAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAATTTGTTGAAGAAATGGTGCAAAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGAAAATGGGCAGTGGTGTCATCTGATCCGAGCTTCAATCGTTTTGTAATGCAAAATGAAGGAAAATTATTCATGTCAAGTTATCCAAAATCTTTTAGAGATTTGGTTGGTAAAAATGGCGTGATTACAGTTCAAGGAGAGCAACAAAGGAAACTACATGGAATCGCATCCAATATGATGCGATTAGATAAGCTTAAGTTCCATTTCATGAATGATATACAAAATGTCATGATCAAAACTTTGAGCAATTTTAAAAACCAACAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAGCTATAAATTTAATGGTTAATCAATTATTAGGGGTTTCAAGCGAGTCTCAAGTGAATGAAATGGCTCAGTTGTTTTCTGATTTTGTCGATGGTTGTCTATCCGTTCCCATCAACATCCCTGGCTCTTCATACCACACTGCTATGAAGGCAAGAGAGAAAATCATAAGTAAAATAAACAAGATCATAGAGGTCCAGAGACAAAATGGTCCTCCAACAGAAGGTAATAATGGTGTACTTGGAAGACTAATAGAGGAAGATAGTTTGCCAGATGATGCTGTTGCAGACTTCATCATCAATCTTCTATTTGCTGGCAATGAAACTACCACAAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGCCCTAATGCCATGGAGCAGCTTCTGGATGAACAGGATTCTCTAAGGACTAATTTTGGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCATTTACTCAATGTGTCATTGATGAAACACTTAGACTTGGTGGCATTGCAATTTGGTTACTTAGAGAAGCAAAAGAAGACATTCAATACCAAGATTTTGTTATACCAAAAGGATGTTTTGTGGTTCCATTTCTCTCAGCAGTTCATTTAGATGAGAAGGTGTACAATGAAGCTAAAAATTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAATTGGAGAAGTAGTCCATTTTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCTGGAGCTGAACTAGCTCGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACAAATTATAGATGGAAACAAATGAAGGAAGATAGGATGTCCTTTTTTCCCTCAGCTCGGTTAGTGAATGGCTTTGAAATTTGTCTAACAAAAAGACATGATAATAATCAAAGAAACTGA

Protein sequence

>MsG0580027127.01.T01

MFLLHQQNHKRGVIISSFFSQFYLKQKMRENISETWLVMIIVILFTAIFAKVIQIKKRKEDKSIGRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIKTLSNFKNQQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSVPINIPGSSYHTAMKAREKIISKINKIIEVQRQNGPPTEGNNGVLGRLIEEDSLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPNAMEQLLDEQDSLRTNFGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLLREAKEDIQYQDFVIPKGCFVVPFLSAVHLDEKVYNEAKNFNPWRWMEPENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTNYRWKQMKEDRMSFFPSARLVNGFEICLTKRHDNNQRN*