AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023467.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023467.01.T01 MTR_8g093780 98.670 827 11 0 1 827 4 830 0.0 1669
MsG0480023467.01.T01 MTR_3g096380 70.638 831 235 6 2 827 6 832 0.0 1196
MsG0480023467.01.T01 MTR_2g011520 63.205 780 277 2 15 794 1 770 0.0 1000
MsG0480023467.01.T01 MTR_5g009770 47.667 793 390 13 2 788 4 777 0.0 723
MsG0480023467.01.T01 MTR_5g009780 47.529 789 396 10 4 788 5 779 0.0 717
MsG0480023467.01.T01 MTR_4g078120 45.970 794 413 10 3 788 2 787 0.0 687
MsG0480023467.01.T01 MTR_4g123583 45.802 786 412 9 10 788 8 786 0.0 682
MsG0480023467.01.T01 MTR_5g009800 44.528 795 390 12 4 788 5 758 0.0 658
MsG0480023467.01.T01 MTR_7g099820 44.322 819 391 21 17 799 7 796 0.0 589
MsG0480023467.01.T01 MTR_7g099800 44.391 829 394 17 17 795 11 822 0.0 587
MsG0480023467.01.T01 MTR_5g009770 46.375 662 331 12 133 788 3 646 0.0 577
MsG0480023467.01.T01 MTR_7g099820 46.418 698 331 15 17 683 7 692 0.0 558
MsG0480023467.01.T01 MTR_7g099750 41.247 834 406 15 17 795 11 815 0.0 557
MsG0480023467.01.T01 MTR_3g031170 38.510 792 441 13 7 789 26 780 8.33e-173 523
MsG0480023467.01.T01 MTR_3g037270 35.897 819 482 13 9 806 12 808 2.49e-171 520
MsG0480023467.01.T01 MTR_0002s1180 34.568 810 502 10 11 806 10 805 3.09e-169 514
MsG0480023467.01.T01 MTR_2g040100 35.706 815 490 15 1 794 15 816 1.18e-168 514
MsG0480023467.01.T01 MTR_1g043400 36.090 798 477 14 10 789 4 786 2.89e-166 507
MsG0480023467.01.T01 MTR_5g067690 34.875 800 486 11 10 792 15 796 6.86e-165 504
MsG0480023467.01.T01 MTR_1g045870 35.975 795 467 14 10 789 4 771 8.98e-164 500
MsG0480023467.01.T01 MTR_3g037260 35.337 815 494 16 9 806 8 806 1.11e-162 498
MsG0480023467.01.T01 MTR_3g071990 34.138 829 503 12 1 821 6 799 1.58e-161 495
MsG0480023467.01.T01 MTR_5g074360 34.513 791 469 12 18 793 31 787 3.52e-158 486
MsG0480023467.01.T01 MTR_5g074380 35.077 784 472 11 18 792 76 831 3.06e-154 477
MsG0480023467.01.T01 MTR_5g074340 33.459 798 490 12 5 792 22 788 4.40e-154 476
MsG0480023467.01.T01 MTR_3g031160 33.924 790 482 12 6 787 20 777 1.86e-148 460
MsG0480023467.01.T01 MTR_5g074320 34.777 739 437 13 67 792 10 716 6.19e-147 455
MsG0480023467.01.T01 MTR_3g071990 33.957 748 454 11 82 821 2 717 1.66e-141 440
MsG0480023467.01.T01 MTR_3g071880 33.376 785 489 18 20 786 22 790 9.55e-140 438
MsG0480023467.01.T01 MTR_3g071870 32.864 782 493 16 20 786 35 799 4.37e-138 434
MsG0480023467.01.T01 MTR_6g015940 34.282 808 474 16 1 789 18 787 9.50e-134 421
MsG0480023467.01.T01 MTR_3g498715 32.286 796 478 16 9 783 33 788 6.25e-132 417
MsG0480023467.01.T01 MTR_8g085260 33.863 818 462 18 1 787 20 789 2.62e-130 412
MsG0480023467.01.T01 MTR_3g083850 32.673 808 498 16 1 794 16 791 6.64e-130 411
MsG0480023467.01.T01 MTR_5g088470 32.422 805 494 15 1 787 16 788 7.19e-130 411
MsG0480023467.01.T01 MTR_5g088450 32.254 803 493 14 12 794 27 798 3.89e-127 404
MsG0480023467.01.T01 MTR_5g088430 32.246 797 491 16 9 787 23 788 4.67e-127 404
MsG0480023467.01.T01 MTR_6g053320 33.144 706 429 12 98 787 87 765 1.43e-126 402
MsG0480023467.01.T01 MTR_7g085870 31.189 824 487 18 2 787 13 794 3.34e-123 395
MsG0480023467.01.T01 MTR_5g088790 31.297 802 492 15 13 787 45 814 1.97e-116 377
MsG0480023467.01.T01 MTR_7g053000 31.258 803 495 15 13 789 45 816 6.54e-116 375
MsG0480023467.01.T01 MTR_7g052970 31.133 803 496 15 13 789 45 816 3.08e-115 373
MsG0480023467.01.T01 MTR_7g052680 31.886 806 486 17 13 789 45 816 8.10e-115 372
MsG0480023467.01.T01 MTR_5g088840 30.625 800 501 13 13 787 45 815 5.32e-114 370
MsG0480023467.01.T01 MTR_3g110700 29.692 778 515 16 26 788 15 775 4.84e-112 364
MsG0480023467.01.T01 MTR_4g029520 30.649 770 500 16 37 788 25 778 6.82e-112 363
MsG0480023467.01.T01 MTR_4g037755 30.323 775 478 17 51 797 38 778 3.56e-109 356
MsG0480023467.01.T01 MTR_3g031030 29.737 797 495 16 35 807 23 778 3.04e-103 340
MsG0480023467.01.T01 MTR_8g093770 100.000 140 0 0 828 967 4 143 7.30e-93 290
MsG0480023467.01.T01 MTR_5g012890 96.000 125 5 0 843 967 18 142 3.06e-81 259
MsG0480023467.01.T01 MTR_4g006830 92.800 125 9 0 842 966 19 143 7.53e-78 250
MsG0480023467.01.T01 MTR_3g465680 37.500 400 211 8 398 792 555 920 4.13e-72 257
MsG0480023467.01.T01 MTR_3g465680 32.817 387 252 5 19 399 44 428 1.39e-55 209
MsG0480023467.01.T01 MTR_7g052895 28.794 514 336 10 13 501 45 553 1.10e-62 227
MsG0480023467.01.T01 MTR_7g052895 33.125 160 86 2 630 789 586 724 1.82e-13 75.1
MsG0480023467.01.T01 MTR_5g083560 37.309 327 171 7 466 787 1 298 1.21e-56 199
MsG0480023467.01.T01 MTR_5g012890 91.111 90 8 0 843 932 18 107 1.76e-51 176
MsG0480023467.01.T01 MTR_3g083860 28.095 210 115 6 1 205 16 194 8.89e-19 87.0
MsG0480023467.01.T01 MTR_5g061460 42.105 95 52 3 452 544 15 108 1.08e-16 79.3
MsG0480023467.01.T01 MTR_1g082340 42.105 95 52 3 452 544 82 175 1.18e-15 77.8
MsG0480023467.01.T01 MTR_8g085240 30.864 162 89 2 626 787 1 139 4.36e-15 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023467.01.T01 AT2G13620 66.626 812 263 4 3 810 8 815 0.0 1084
MsG0480023467.01.T01 AT5G41610 47.677 818 401 11 3 806 2 806 0.0 713
MsG0480023467.01.T01 AT5G41610 47.677 818 401 11 3 806 2 806 0.0 713
MsG0480023467.01.T01 AT3G17630 46.879 785 389 8 10 788 10 772 0.0 708
MsG0480023467.01.T01 AT3G17630 46.879 785 389 8 10 788 10 772 0.0 708
MsG0480023467.01.T01 AT4G23700 44.186 817 428 17 10 808 8 814 0.0 669
MsG0480023467.01.T01 AT4G23700 44.186 817 428 17 10 808 8 814 0.0 669
MsG0480023467.01.T01 AT5G41610 47.137 751 370 11 70 806 1 738 0.0 627
MsG0480023467.01.T01 AT1G05580 42.119 793 432 9 7 788 23 799 0.0 627
MsG0480023467.01.T01 AT1G64170 43.366 814 413 16 1 790 5 794 0.0 624
MsG0480023467.01.T01 AT3G53720 43.171 820 417 15 17 795 11 822 0.0 607
MsG0480023467.01.T01 AT1G05580 43.750 704 372 8 93 788 1 688 0.0 575
MsG0480023467.01.T01 AT2G31910 37.919 836 473 9 7 817 18 832 0.0 572
MsG0480023467.01.T01 AT2G31910 38.667 750 420 8 93 817 1 735 1.92e-172 520
MsG0480023467.01.T01 AT2G31910 38.667 750 420 8 93 817 1 735 1.92e-172 520
MsG0480023467.01.T01 AT3G53720 43.046 755 381 15 82 795 3 749 5.69e-172 520
MsG0480023467.01.T01 AT1G06970 35.194 824 488 18 6 819 24 811 2.95e-162 497
MsG0480023467.01.T01 AT2G30240 35.456 801 463 15 6 790 26 788 3.58e-148 461
MsG0480023467.01.T01 AT5G58460 32.836 804 479 13 20 789 53 829 8.53e-136 429
MsG0480023467.01.T01 AT5G37060 32.134 806 484 13 20 789 53 831 4.66e-129 411
MsG0480023467.01.T01 AT3G44900 31.356 826 488 18 8 787 20 812 2.91e-118 381
MsG0480023467.01.T01 AT5G22900 31.687 830 484 21 8 787 21 817 4.09e-117 379
MsG0480023467.01.T01 AT2G28180 32.759 812 484 20 6 787 29 808 5.23e-112 365
MsG0480023467.01.T01 AT1G08140 30.137 803 506 17 13 789 32 805 9.18e-110 358
MsG0480023467.01.T01 AT5G01690 30.295 779 494 14 20 787 27 767 4.82e-108 353
MsG0480023467.01.T01 AT1G08150 30.139 793 491 22 13 776 39 797 2.49e-104 344
MsG0480023467.01.T01 AT2G28170 30.468 791 472 23 29 787 54 798 4.42e-101 335
MsG0480023467.01.T01 AT3G44930 30.364 797 477 21 16 778 17 769 7.81e-101 334
MsG0480023467.01.T01 AT5G22910 29.250 800 499 17 9 776 20 784 6.83e-98 326
MsG0480023467.01.T01 AT3G44920 29.204 791 508 15 16 785 17 776 7.80e-95 318
MsG0480023467.01.T01 AT5G01680 28.040 806 529 13 7 795 12 783 7.82e-92 309
MsG0480023467.01.T01 AT3G52080 28.659 820 536 20 1 797 1 794 2.49e-91 308
MsG0480023467.01.T01 AT1G16380 28.299 788 520 18 23 788 11 775 6.22e-91 307
MsG0480023467.01.T01 AT3G44910 28.554 802 469 21 16 776 17 755 1.03e-90 306
MsG0480023467.01.T01 AT1G79400 29.225 787 510 22 23 787 11 772 4.77e-89 302
MsG0480023467.01.T01 AT1G08135 28.931 795 484 23 23 787 51 794 1.70e-86 295
MsG0480023467.01.T01 AT2G32060 76.000 125 29 1 843 967 21 144 5.29e-62 207
MsG0480023467.01.T01 AT2G32060 76.000 125 29 1 843 967 21 144 5.29e-62 207
MsG0480023467.01.T01 AT2G32060 76.000 125 29 1 843 967 21 144 5.29e-62 207
MsG0480023467.01.T01 AT1G15930 74.400 125 31 1 843 967 21 144 6.67e-58 196
MsG0480023467.01.T01 AT1G15930 74.400 125 31 1 843 967 21 144 6.67e-58 196

Find 196 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAATCCTTCTTGTTATTT+TGG 0.090186 4:-85612908 MsG0480023467.01.T01:CDS
AAGCTTGAGGACTTTGTTTC+TGG 0.152576 4:-85613012 MsG0480023467.01.T01:CDS
GCGAATTCGCTAATACATTT+TGG 0.194946 4:+85611872 None:intergenic
CTTATTATCCACATGATTAT+TGG 0.199689 4:+85613204 None:intergenic
TCGCTAAACGTTTCGCCTTC+TGG 0.216679 4:+85613174 None:intergenic
GTATTGGGTCCTTCTGTTCT+TGG 0.219992 4:-85613729 MsG0480023467.01.T01:CDS
ATCATTGTTGGAACATTTCT+AGG 0.262055 4:+85612267 None:intergenic
AGTTACTTTGGCTTCTATAA+TGG 0.262493 4:-85613277 MsG0480023467.01.T01:CDS
TAAGATATCATTCCCCTTGA+TGG 0.275220 4:+85612357 None:intergenic
TCTCAACAAATTCAAGTAAA+AGG 0.275254 4:+85607719 None:intergenic
CAATAATCATGTGGATAATA+AGG 0.286457 4:-85613203 MsG0480023467.01.T01:CDS
TTCACCAACTTGACGTAATC+AGG 0.299059 4:+85608815 None:intergenic
TGGAGTGAGTGTCCTGAATT+AGG 0.307292 4:-85611370 MsG0480023467.01.T01:CDS
TGTCGCGGCGATAAGGTCTA+TGG 0.311126 4:-85611467 MsG0480023467.01.T01:CDS
GTCCTCTCCCAACTATAAAA+AGG 0.313177 4:+85611431 None:intergenic
TCTCCAAGGGTCTTTGCATT+TGG 0.313809 4:+85608752 None:intergenic
GACCGGTAAGTTCAACTAAA+TGG 0.315477 4:+85612187 None:intergenic
AGGTCTATGGGTGATGTATT+TGG 0.326282 4:-85611454 MsG0480023467.01.T01:CDS
TGATAACAACAAATGGAATA+TGG 0.327137 4:-85614069 MsG0480023467.01.T01:CDS
ATCACCATCACACTTCTTAG+AGG 0.329289 4:+85613675 None:intergenic
GTTGCTGCAGCTGGAATTCC+AGG 0.331115 4:-85608986 MsG0480023467.01.T01:CDS
TGAGGCCAACGTTAGTCTTT+AGG 0.333049 4:+85612956 None:intergenic
TGGAGAATGTCGGAACATTC+TGG 0.339383 4:-85611718 MsG0480023467.01.T01:CDS
CCATTTGTTGTTATCATAGT+TGG 0.342560 4:+85614076 None:intergenic
CATAAGCAACAAACAGTTGA+TGG 0.342666 4:-85611934 MsG0480023467.01.T01:CDS
CAGATCACCCGGCTCTTAAC+AGG 0.361625 4:-85612125 MsG0480023467.01.T01:CDS
GGTTTCATCACAGATGCTAT+TGG 0.364416 4:-85613111 MsG0480023467.01.T01:CDS
TCATCGATGGTGCTGCTACA+TGG 0.377754 4:-85612936 MsG0480023467.01.T01:CDS
AGCTCCTACATAAGCTTTCT+CGG 0.379730 4:+85613482 None:intergenic
CTAGCAGGTGTGATGATATC+AGG 0.381002 4:-85613132 MsG0480023467.01.T01:CDS
TCACCAATAGCTCCTAATTC+AGG 0.382026 4:+85611358 None:intergenic
GTCCATTTAGTTGAACTTAC+CGG 0.387264 4:-85612189 MsG0480023467.01.T01:CDS
ATTGAGACTGCCACAAATCT+AGG 0.388989 4:+85607842 None:intergenic
ACTGTTTGTTGCTTATGAAA+AGG 0.395881 4:+85611940 None:intergenic
TCAAGGAGGTTGATCATTGT+TGG 0.396662 4:+85612255 None:intergenic
TTGTTGGATTTGAGGCTTCA+AGG 0.396711 4:+85612238 None:intergenic
CCTATGCAGATAATCCAAAA+AGG 0.401269 4:+85607781 None:intergenic
GATAGAGAAGCATTAAGTTA+TGG 0.406106 4:-85611742 MsG0480023467.01.T01:CDS
CTGCATTTCCTGTTCTTGCT+AGG 0.406240 4:-85613425 MsG0480023467.01.T01:CDS
ATTCCAGCTGCAGCAACAAC+TGG 0.406602 4:+85608992 None:intergenic
TGCAAAGACCCTTGGAGAAT+GGG 0.412944 4:-85608747 MsG0480023467.01.T01:CDS
GAGGAAGAGCATAGTCTAAA+GGG 0.418227 4:+85614035 None:intergenic
ATAATATCCATTGGCTCCCC+TGG 0.419454 4:+85608968 None:intergenic
CCAACTATGATAACAACAAA+TGG 0.423058 4:-85614076 MsG0480023467.01.T01:CDS
ATGAAAAGGGATGATTATAA+AGG 0.424901 4:+85611954 None:intergenic
GAGCCAGTTGTTGCTGCAGC+TGG 0.425162 4:-85608995 MsG0480023467.01.T01:CDS
TTTGGTTTGATTATTCCAAC+TGG 0.425463 4:-85613060 MsG0480023467.01.T01:CDS
TGGACAACATAGATACATAT+TGG 0.426937 4:+85612207 None:intergenic
TTGAGAAAGTCACGCGCTTA+TGG 0.428624 4:-85608926 MsG0480023467.01.T01:CDS
TTCATCGTTATTTCATCTCC+AGG 0.431360 4:+85611667 None:intergenic
ACGCGTTATAGCTGAAATCT+TGG 0.432167 4:-85613936 MsG0480023467.01.T01:intron
ATTAGCGAATTCGCCTTGTT+CGG 0.432487 4:-85611863 MsG0480023467.01.T01:CDS
TATATTTGTTTGATACTAGC+AGG 0.438141 4:-85613147 MsG0480023467.01.T01:CDS
GTTATATCGCCGCTGACGGC+AGG 0.447501 4:-85611403 MsG0480023467.01.T01:CDS
GACACTGTGTTCAGCACAAA+GGG 0.447539 4:+85608790 None:intergenic
TCTTCATGCATTGTAGAGTA+AGG 0.447903 4:+85612009 None:intergenic
TTCAATTGCATATATTGAAA+AGG 0.450935 4:-85611512 MsG0480023467.01.T01:CDS
ATGCAAAGACCCTTGGAGAA+TGG 0.451113 4:-85608748 MsG0480023467.01.T01:CDS
GCGAATTCGCCTTGTTCGGT+TGG 0.454892 4:-85611859 MsG0480023467.01.T01:CDS
GTTGGAATTCTAGTAGATAG+AGG 0.458195 4:-85611841 MsG0480023467.01.T01:CDS
ATAACGCGTGGTTGACGAAT+GGG 0.462612 4:+85613950 None:intergenic
CTTAATGCTTCTCTATCATC+TGG 0.462743 4:+85611748 None:intergenic
GAGAAGCATTAAGTTATGGT+TGG 0.462918 4:-85611738 MsG0480023467.01.T01:CDS
GGAAAAGCTAGGAAGGTAAC+TGG 0.463250 4:-85608042 MsG0480023467.01.T01:CDS
AGGAAACTGTCGCGGCGATA+AGG 0.464960 4:-85611474 MsG0480023467.01.T01:CDS
CTGTTTGTTGCTTATGAAAA+GGG 0.466217 4:+85611941 None:intergenic
TTGGTAGTTCAACAATATGT+TGG 0.466684 4:-85611295 MsG0480023467.01.T01:CDS
CATCGATGGTGCTGCTACAT+GGG 0.466765 4:-85612935 MsG0480023467.01.T01:CDS
ATTCTTGGTTGGAGTAGGCA+TGG 0.466781 4:-85613616 MsG0480023467.01.T01:CDS
GTCTATTTACATTGTTATCA+CGG 0.470885 4:+85611629 None:intergenic
GCAAGGATCCTAGCAAGAAC+AGG 0.474983 4:+85613417 None:intergenic
CTATATATAATTGATATTCC+AGG 0.476165 4:+85612381 None:intergenic
GTAAAAGGTGGCAATGAGAA+TGG 0.480235 4:+85607734 None:intergenic
TGTCCTGAATTAGGAGCTAT+TGG 0.480374 4:-85611361 MsG0480023467.01.T01:CDS
AAACTGATCAACACAGAGTT+GGG 0.480948 4:-85613387 MsG0480023467.01.T01:CDS
ATGATATTACCATTCGGAAC+AGG 0.481724 4:-85613537 MsG0480023467.01.T01:CDS
AGAGGAAGAGCATAGTCTAA+AGG 0.481766 4:+85614034 None:intergenic
GTTTCTGACGGAGCTGCACT+TGG 0.485631 4:-85612829 MsG0480023467.01.T01:CDS
TAACATCGGTAGGGATCAAA+AGG 0.489457 4:-85612764 MsG0480023467.01.T01:intron
AGCTGGTACTGAAGATGGAT+TGG 0.491202 4:-85611272 MsG0480023467.01.T01:CDS
TGATCAACACAGAGTTGGGC+AGG 0.494127 4:-85613383 MsG0480023467.01.T01:CDS
GCTTGTGTTGGCAAAGTGGT+TGG 0.496738 4:-85612886 MsG0480023467.01.T01:CDS
ATGCAGGGAGGGATAGTATT+GGG 0.498244 4:-85613744 MsG0480023467.01.T01:intron
GAGTAGTGCTGACGTTCGAC+CGG 0.498943 4:+85612170 None:intergenic
GGCATGCTCATGAACACAAA+AGG 0.499957 4:-85612808 MsG0480023467.01.T01:CDS
GCTTCCGTCCTGTTAAGAGC+CGG 0.500596 4:+85612117 None:intergenic
TGACGGCAGGGCTAACAGAT+TGG 0.502337 4:-85611390 MsG0480023467.01.T01:CDS
TCTATTTACATTGTTATCAC+GGG 0.509436 4:+85611630 None:intergenic
CAAGAGTATAAATAGCGAAT+GGG 0.510869 4:+85607679 None:intergenic
TCATTGTTGGAACATTTCTA+GGG 0.513596 4:+85612268 None:intergenic
TAAAAGGTGGCAATGAGAAT+GGG 0.514023 4:+85607735 None:intergenic
TTTCTATTCTTGGTTGGAGT+AGG 0.514556 4:-85613621 MsG0480023467.01.T01:CDS
ATTATTCCAACTGGACCACT+TGG 0.516470 4:-85613051 MsG0480023467.01.T01:CDS
TTTATAGTTGGGAGAGGACA+AGG 0.518239 4:-85611427 MsG0480023467.01.T01:CDS
TTGCAATATGCCTAGATTTG+TGG 0.518317 4:-85607852 MsG0480023467.01.T01:three_prime_UTR
AATTATATATAGACCATCAA+GGG 0.518405 4:-85612370 MsG0480023467.01.T01:CDS
TGCTCTTATTGAAAAGCTTG+AGG 0.521040 4:-85613025 MsG0480023467.01.T01:CDS
AAGTTATGGTTGGAGAATGT+CGG 0.522591 4:-85611728 MsG0480023467.01.T01:CDS
GTTATAACTATAATGATGAC+TGG 0.524275 4:-85612414 MsG0480023467.01.T01:CDS
TCAAGAGTATAAATAGCGAA+TGG 0.524937 4:+85607678 None:intergenic
TTGCTCCTGTGTGGTTGTCA+AGG 0.525394 4:-85608019 MsG0480023467.01.T01:intron
ATTCGCTATTTATACTCTTG+AGG 0.527975 4:-85607676 MsG0480023467.01.T01:three_prime_UTR
TGCAACAATTGCTTCAGTGT+TGG 0.528308 4:-85611314 MsG0480023467.01.T01:CDS
CTCTAGAAAATCAGATCACC+CGG 0.530561 4:-85612136 MsG0480023467.01.T01:CDS
GTTCCAAATGCAAAGACCCT+TGG 0.532260 4:-85608755 MsG0480023467.01.T01:CDS
GGGAGATTGCTGTCAAAGGT+TGG 0.533027 4:+85612031 None:intergenic
CTTCCGTCCTGTTAAGAGCC+GGG 0.533156 4:+85612118 None:intergenic
CAATTATATATAGACCATCA+AGG 0.534656 4:-85612371 MsG0480023467.01.T01:CDS
TTGCTGCAGCTGGAATTCCA+GGG 0.537879 4:-85608985 MsG0480023467.01.T01:CDS
AAAACTGATCAACACAGAGT+TGG 0.539352 4:-85613388 MsG0480023467.01.T01:CDS
GTTGGAGCTGGTACTGAAGA+TGG 0.542804 4:-85611277 MsG0480023467.01.T01:CDS
CTCTGCCATAGCAATTGCTA+TGG 0.545101 4:+85613308 None:intergenic
CTTCATGCATTGTAGAGTAA+GGG 0.549291 4:+85612010 None:intergenic
TCAGTTACCATAGCAGTAGC+TGG 0.550058 4:-85613561 MsG0480023467.01.T01:CDS
GAACGCAACCGCAGATGAGA+TGG 0.552034 4:-85614110 MsG0480023467.01.T01:CDS
TTCTTGTTCTTAACATCGGT+AGG 0.553670 4:-85612774 MsG0480023467.01.T01:CDS
GCATCTGCACTACGACGCAT+TGG 0.558346 4:-85613591 MsG0480023467.01.T01:CDS
TCTGTTAGCCCTGCCGTCAG+CGG 0.559828 4:+85611394 None:intergenic
TCTTGTTCTTAACATCGGTA+GGG 0.560020 4:-85612773 MsG0480023467.01.T01:CDS
GTTCAACAATATGTTGGAGC+TGG 0.563151 4:-85611289 MsG0480023467.01.T01:CDS
TCATTCTGTTACACCGCCGA+GGG 0.564325 4:-85611212 MsG0480023467.01.T01:CDS
TAATCTTCATTTGTCAACAC+TGG 0.565195 4:+85611244 None:intergenic
TTGTGCAAAATTGATTCAGA+AGG 0.565495 4:-85608063 MsG0480023467.01.T01:CDS
ATGACTGGATTGATTGTACC+TGG 0.568310 4:-85612399 MsG0480023467.01.T01:CDS
ACTGCAGTCATAATATCCAT+TGG 0.568889 4:+85608959 None:intergenic
GCTGGTATGATATTACCATT+CGG 0.569350 4:-85613543 MsG0480023467.01.T01:CDS
GCAAAACCAAGTGGTCCAGT+TGG 0.570842 4:+85613045 None:intergenic
TATAACGCGTGGTTGACGAA+TGG 0.571587 4:+85613949 None:intergenic
TTGTTTCGACCAAGAACAGA+AGG 0.572082 4:+85613720 None:intergenic
TTTGGCCATAGCAATTGCTA+TGG 0.572252 4:-85613313 MsG0480023467.01.T01:CDS
TATCATACCAGCTACTGCTA+TGG 0.575268 4:+85613554 None:intergenic
TGCTGCAGCTGGAATTCCAG+GGG 0.575795 4:-85608984 MsG0480023467.01.T01:CDS
TTGATTCAGAAGGAAAAGCT+AGG 0.578774 4:-85608053 MsG0480023467.01.T01:CDS
GCTGGTACTGAAGATGGATT+GGG 0.578814 4:-85611271 MsG0480023467.01.T01:CDS
ATTGAAAAGGTTGTAAACAA+TGG 0.579050 4:-85611499 MsG0480023467.01.T01:CDS
ATAACTTGTAGAATGAAGAG+AGG 0.581681 4:+85614016 None:intergenic
AGGAGTTATATCGCCGCTGA+CGG 0.584334 4:-85611407 MsG0480023467.01.T01:CDS
ACATTTGATCAGCTATCAGA+CGG 0.584598 4:+85611803 None:intergenic
ACAGCTCTGTGTTCTTGCTG+AGG 0.587565 4:-85608849 MsG0480023467.01.T01:CDS
GTCGCGGCGATAAGGTCTAT+GGG 0.587579 4:-85611466 MsG0480023467.01.T01:CDS
CGGAATGGAATCAACAAACA+TGG 0.589235 4:-85611911 MsG0480023467.01.T01:CDS
ACAAACAGTTGATGGCGGAA+TGG 0.589989 4:-85611926 MsG0480023467.01.T01:CDS
TAAGGGGAGATTGCTGTCAA+AGG 0.590098 4:+85612027 None:intergenic
CCAACCTGATTACGTCAAGT+TGG 0.591510 4:-85608819 MsG0480023467.01.T01:CDS
TTACACCAGCCCATTCTCCA+AGG 0.592149 4:+85608738 None:intergenic
ACTAGAATTCCAACCGAACA+AGG 0.592973 4:+85611850 None:intergenic
TTCATGCATTGTAGAGTAAG+GGG 0.593579 4:+85612011 None:intergenic
GAAATTCTTGTTCTTAACAT+CGG 0.594156 4:-85612778 MsG0480023467.01.T01:CDS
CAATTGAATCATCATTCACA+TGG 0.594582 4:+85611527 None:intergenic
CACAAGCCAAAATAACAAGA+AGG 0.595058 4:+85612902 None:intergenic
TTCAGAAGGAAAAGCTAGGA+AGG 0.596975 4:-85608049 MsG0480023467.01.T01:CDS
ACTAACGTTGGCCTCATCGA+TGG 0.600029 4:-85612949 MsG0480023467.01.T01:CDS
TGGAATTCCAGGGGAGCCAA+TGG 0.602144 4:-85608975 MsG0480023467.01.T01:CDS
TATCAAATGTCAGTTTCTGA+CGG 0.603531 4:-85612841 MsG0480023467.01.T01:CDS
TTGTAAGACCAATAATCATG+TGG 0.612959 4:-85613212 MsG0480023467.01.T01:CDS
AGAAAGTCACGCGCTTATGG+TGG 0.613205 4:-85608923 MsG0480023467.01.T01:CDS
ATCATTCTGTTACACCGCCG+AGG 0.614134 4:-85611213 MsG0480023467.01.T01:CDS
CCAACTTGACGTAATCAGGT+TGG 0.614249 4:+85608819 None:intergenic
TTTGGCTTGTGTTGGCAAAG+TGG 0.614542 4:-85612890 MsG0480023467.01.T01:CDS
AAGACCCTTGGAGAATGGGC+TGG 0.615483 4:-85608743 MsG0480023467.01.T01:CDS
TGTGATGGTGATTGAAACAA+TGG 0.619156 4:-85613664 MsG0480023467.01.T01:CDS
GATGCAGGGAGGGATAGTAT+TGG 0.621630 4:-85613745 MsG0480023467.01.T01:intron
TCCAGGAACAAAACGCATCA+CGG 0.621690 4:+85611684 None:intergenic
CAACAAATTCAAGTAAAAGG+TGG 0.621863 4:+85607722 None:intergenic
TTATATCGCCGCTGACGGCA+GGG 0.622439 4:-85611402 MsG0480023467.01.T01:CDS
AACACCGAGAAAGCTTATGT+AGG 0.622814 4:-85613486 MsG0480023467.01.T01:CDS
TGACACTGTGTTCAGCACAA+AGG 0.628583 4:+85608789 None:intergenic
ACAACAAATGGAATATGGCA+AGG 0.629043 4:-85614064 MsG0480023467.01.T01:CDS
TGAGGGAGCATTTGCAACCA+TGG 0.631926 4:-85612439 MsG0480023467.01.T01:CDS
CATTGTTGGAACATTTCTAG+GGG 0.634218 4:+85612269 None:intergenic
GCTTATGGTGGTCTTGCACG+TGG 0.635715 4:-85608911 MsG0480023467.01.T01:CDS
AATAGTGCTCCTGTTCCGAA+TGG 0.639996 4:+85613528 None:intergenic
GGTAACTGGTTGCTCCTGTG+TGG 0.641819 4:-85608028 MsG0480023467.01.T01:CDS
TACACCAGCCCATTCTCCAA+GGG 0.643748 4:+85608739 None:intergenic
TCAATAAGAGCAAAACCAAG+TGG 0.645811 4:+85613036 None:intergenic
CATTATAGTTATAACCACCA+TGG 0.645934 4:+85612422 None:intergenic
ATAATAAGGAAAACACCAGA+AGG 0.646327 4:-85613189 MsG0480023467.01.T01:CDS
AAGATTTCAGCTATAACGCG+TGG 0.653862 4:+85613938 None:intergenic
AAAGGTTGTAAACAATGGCG+AGG 0.659107 4:-85611494 MsG0480023467.01.T01:CDS
ATGTAGCAGCACCATCGATG+AGG 0.663254 4:+85612938 None:intergenic
TGAAAATTATGAACAACACG+CGG 0.671334 4:-85612067 MsG0480023467.01.T01:CDS
ATTATATATAGACCATCAAG+GGG 0.672726 4:-85612369 MsG0480023467.01.T01:CDS
ATTGAAACAATGGCAAACGT+TGG 0.672829 4:-85613654 MsG0480023467.01.T01:CDS
CAATGGCGAGGAAACTGTCG+CGG 0.681897 4:-85611482 MsG0480023467.01.T01:CDS
ACATACCTTGACAACCACAC+AGG 0.682837 4:+85608014 None:intergenic
ATTCTGTTACACCGCCGAGG+GGG 0.683084 4:-85611210 MsG0480023467.01.T01:CDS
GATCAACACAGAGTTGGGCA+GGG 0.691049 4:-85613382 MsG0480023467.01.T01:CDS
GGGAGCATTTGCAACCATGG+TGG 0.695012 4:-85612436 MsG0480023467.01.T01:CDS
TTGGATTTGAGGCTTCAAGG+AGG 0.696630 4:+85612241 None:intergenic
AAGCAACAAACAGTTGATGG+CGG 0.700220 4:-85611931 MsG0480023467.01.T01:CDS
AGTGGCCTAAAGACTAACGT+TGG 0.705339 4:-85612961 MsG0480023467.01.T01:CDS
TCACCCGGCTCTTAACAGGA+CGG 0.707532 4:-85612121 MsG0480023467.01.T01:CDS
TATGAAGACGAAGATTCGAG+TGG 0.707937 4:+85613979 None:intergenic
TAAGAACAAGAATTTCAACA+AGG 0.709365 4:+85612785 None:intergenic
CATTCTGTTACACCGCCGAG+GGG 0.711798 4:-85611211 MsG0480023467.01.T01:CDS
ATAACACACCATCTCATCTG+CGG 0.720210 4:+85614102 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAACTATATTCTTT+GGG + Chr4:85611187-85611206 None:intergenic 10.0%
!! AAATATATAATTGAGAATTG+TGG + Chr4:85613057-85613076 None:intergenic 15.0%
!! ATTATTAGTAATAGGAATAT+AGG - Chr4:85611454-85611473 MsG0480023467.01.T01:CDS 15.0%
!! ATTCTTATAATAAAATACAG+AGG - Chr4:85611324-85611343 MsG0480023467.01.T01:CDS 15.0%
!! ATTTAACATCTACTAATAAA+TGG + Chr4:85609154-85609173 None:intergenic 15.0%
!! CAAAAATAAACTATATTCTT+TGG + Chr4:85611188-85611207 None:intergenic 15.0%
!! CATATAGATTAAAATAAATG+AGG + Chr4:85613523-85613542 None:intergenic 15.0%
!! TAATTATATTTATCTCTCTA+AGG + Chr4:85611500-85611519 None:intergenic 15.0%
!! TATAAAATGTTATTGCTTAT+TGG + Chr4:85613200-85613219 None:intergenic 15.0%
!! TTATTCAAGATCATAAATAT+TGG - Chr4:85607908-85607927 MsG0480023467.01.T01:CDS 15.0%
!! TTCTTATAATAAAATACAGA+GGG - Chr4:85611325-85611344 MsG0480023467.01.T01:CDS 15.0%
!! TTGTTTAAATTCTTTGATTA+TGG - Chr4:85611119-85611138 MsG0480023467.01.T01:intron 15.0%
!!! AATTACTTTAAAATAAGTGT+GGG - Chr4:85613092-85613111 MsG0480023467.01.T01:CDS 15.0%
!!! ATAAATGGATTTAATTGATA+TGG + Chr4:85609139-85609158 None:intergenic 15.0%
!!! ATATATTAATTATGTTGACT+TGG - Chr4:85611000-85611019 MsG0480023467.01.T01:intron 15.0%
!!! TAAGCAAATTTTAACTTTTT+AGG + Chr4:85611814-85611833 None:intergenic 15.0%
!!! TAATGTAAAAAAGTTTTACA+GGG - Chr4:85607834-85607853 MsG0480023467.01.T01:three_prime_UTR 15.0%
!!! TATATTAATTATGTTGACTT+GGG - Chr4:85611001-85611020 MsG0480023467.01.T01:intron 15.0%
!!! TCTTTTATATTTTCTATTCT+TGG - Chr4:85608083-85608102 MsG0480023467.01.T01:intron 15.0%
!!! TTAACTATTTTCATTTTTGT+AGG - Chr4:85613779-85613798 MsG0480023467.01.T01:intron 15.0%
!!! TTAATGTAAAAAAGTTTTAC+AGG - Chr4:85607833-85607852 MsG0480023467.01.T01:three_prime_UTR 15.0%
!!! TTATAATAACTTTTTGATCT+GGG + Chr4:85612506-85612525 None:intergenic 15.0%
!!! TTATTTTTTTTAAGAAAGGA+TGG - Chr4:85611425-85611444 MsG0480023467.01.T01:CDS 15.0%
!!! TTTATAATAACTTTTTGATC+TGG + Chr4:85612507-85612526 None:intergenic 15.0%
!! AATAGTTAAGCATACATAAA+CGG + Chr4:85613768-85613787 None:intergenic 20.0%
!! AATTATATATAGACCATCAA+GGG - Chr4:85609344-85609363 MsG0480023467.01.T01:intron 20.0%
!! ATTGATTATGAGGATAATTA+TGG - Chr4:85612454-85612473 MsG0480023467.01.T01:intron 20.0%
!! CAAAACCAATATAAAACAAA+AGG + Chr4:85613433-85613452 None:intergenic 20.0%
!! CATGTTGATATATCAATTAA+CGG - Chr4:85609219-85609238 MsG0480023467.01.T01:intron 20.0%
!! CATTCAATAAATGATATATG+TGG + Chr4:85611789-85611808 None:intergenic 20.0%
!! CTATATATAATTGATATTCC+AGG + Chr4:85609336-85609355 None:intergenic 20.0%
!! GGTAACAAATTATTAGTAAT+AGG - Chr4:85611446-85611465 MsG0480023467.01.T01:CDS 20.0%
!! TAAAAAAACAAAGTGAGATT+TGG + Chr4:85612051-85612070 None:intergenic 20.0%
!! TGCATAAAAAAAAAAATCAG+TGG - Chr4:85611379-85611398 MsG0480023467.01.T01:CDS 20.0%
!! TTCAATTGCATATATTGAAA+AGG - Chr4:85610202-85610221 MsG0480023467.01.T01:intron 20.0%
!!! AATCTGTTTTTAATACAGAA+AGG - Chr4:85610531-85610550 MsG0480023467.01.T01:intron 20.0%
!!! ACATTTTAAGGTGAATAATT+GGG - Chr4:85611228-85611247 MsG0480023467.01.T01:CDS 20.0%
!!! ACCTAAAATTTCACATTTTA+AGG - Chr4:85611216-85611235 MsG0480023467.01.T01:CDS 20.0%
!!! ACCTTAAAATGTGAAATTTT+AGG + Chr4:85611220-85611239 None:intergenic 20.0%
!!! ATCTTTTTTTGACATTTGAA+TGG + Chr4:85609394-85609413 None:intergenic 20.0%
!!! ATTCAATTGATAATATGCAT+AGG + Chr4:85611276-85611295 None:intergenic 20.0%
!!! ATTTGCCTTTTGTTTTATAT+TGG - Chr4:85613425-85613444 MsG0480023467.01.T01:CDS 20.0%
!!! CTAGCAGAAATATAAATTTT+AGG - Chr4:85614101-85614120 MsG0480023467.01.T01:CDS 20.0%
!!! GAATTACTTTAAAATAAGTG+TGG - Chr4:85613091-85613110 MsG0480023467.01.T01:CDS 20.0%
!!! TAATAGGAATATAGGAATTT+TGG - Chr4:85611462-85611481 MsG0480023467.01.T01:CDS 20.0%
!!! TGATTGTGATTATATTTTGT+TGG - Chr4:85610557-85610576 MsG0480023467.01.T01:intron 20.0%
!!! TTATATTTTCTATTCTTGGT+TGG - Chr4:85608087-85608106 MsG0480023467.01.T01:intron 20.0%
!!! TTTAAAACAATAAACTTGCA+TGG + Chr4:85611037-85611056 None:intergenic 20.0%
!!! TTTAATCCTTCTTGTTATTT+TGG - Chr4:85608806-85608825 MsG0480023467.01.T01:CDS 20.0%
!!! TTTTCATTTTTGTAGGATTT+CGG - Chr4:85613786-85613805 MsG0480023467.01.T01:intron 20.0%
! AAAAAAAAAATCAGTGGCAT+AGG - Chr4:85611385-85611404 MsG0480023467.01.T01:CDS 25.0%
! AAATTCAGAAGTTATTGTCT+TGG - Chr4:85613559-85613578 MsG0480023467.01.T01:CDS 25.0%
! AATATGATACATCTAAATGG+TGG + Chr4:85607876-85607895 None:intergenic 25.0%
! AATGAAACTTTGGACAATAA+CGG + Chr4:85610792-85610811 None:intergenic 25.0%
! AATTGATATATCAACATGTG+TGG + Chr4:85609217-85609236 None:intergenic 25.0%
! ACAAAAAGTTTCTCTATAGT+CGG + Chr4:85612589-85612608 None:intergenic 25.0%
! ACGAATATGATACATCTAAA+TGG + Chr4:85607879-85607898 None:intergenic 25.0%
! AGAGAATGAAAAAGTTACTT+TGG - Chr4:85608425-85608444 MsG0480023467.01.T01:intron 25.0%
! ATATGATACATCTAAATGGT+GGG + Chr4:85607875-85607894 None:intergenic 25.0%
! ATGAAAAGGGATGATTATAA+AGG + Chr4:85609763-85609782 None:intergenic 25.0%
! ATGGATTTAATTGATATGGA+AGG + Chr4:85609135-85609154 None:intergenic 25.0%
! ATTATATATAGACCATCAAG+GGG - Chr4:85609345-85609364 MsG0480023467.01.T01:intron 25.0%
! ATTGAAAAGGTTGTAAACAA+TGG - Chr4:85610215-85610234 MsG0480023467.01.T01:intron 25.0%
! CAATAATCATGTGGATAATA+AGG - Chr4:85608511-85608530 MsG0480023467.01.T01:intron 25.0%
! CAATTATATATAGACCATCA+AGG - Chr4:85609343-85609362 MsG0480023467.01.T01:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - Chr4:85611750-85611769 MsG0480023467.01.T01:CDS 25.0%
! CTATGTTTATAGTAATGCAA+GGG + Chr4:85613005-85613024 None:intergenic 25.0%
! CTTATTATCCACATGATTAT+TGG + Chr4:85608513-85608532 None:intergenic 25.0%
! GAAATTCTTGTTCTTAACAT+CGG - Chr4:85608936-85608955 MsG0480023467.01.T01:CDS 25.0%
! GACAATAACTTCTGAATTTA+AGG + Chr4:85613558-85613577 None:intergenic 25.0%
! GTCTATTTACATTGTTATCA+CGG + Chr4:85610088-85610107 None:intergenic 25.0%
! GTTATAACTATAATGATGAC+TGG - Chr4:85609300-85609319 MsG0480023467.01.T01:intron 25.0%
! GTTATCTTGTTACATATACA+TGG - Chr4:85607935-85607954 MsG0480023467.01.T01:intron 25.0%
! TAAGAACAAGAATTTCAACA+AGG + Chr4:85608932-85608951 None:intergenic 25.0%
! TAGTACAATAATACACTACT+AGG - Chr4:85609179-85609198 MsG0480023467.01.T01:intron 25.0%
! TATATTTGTTTGATACTAGC+AGG - Chr4:85608567-85608586 MsG0480023467.01.T01:intron 25.0%
! TCAAATATGTCATAAGGAAA+TGG + Chr4:85613034-85613053 None:intergenic 25.0%
! TCTATGTTTATAGTAATGCA+AGG + Chr4:85613006-85613025 None:intergenic 25.0%
! TCTATTTACATTGTTATCAC+GGG + Chr4:85610087-85610106 None:intergenic 25.0%
! TCTCAACAAATTCAAGTAAA+AGG + Chr4:85613998-85614017 None:intergenic 25.0%
! TGATAACAACAAATGGAATA+TGG - Chr4:85607645-85607664 MsG0480023467.01.T01:three_prime_UTR 25.0%
! TTCATATGACTTAATATCGT+TGG - Chr4:85609044-85609063 MsG0480023467.01.T01:intron 25.0%
! TTTGATACTTGAAACTTGTA+AGG + Chr4:85611096-85611115 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+TGG - Chr4:85611824-85611843 MsG0480023467.01.T01:CDS 25.0%
!! CATTAATGATGTTTTGTCAT+GGG - Chr4:85608374-85608393 MsG0480023467.01.T01:intron 25.0%
!! TCATTAATGATGTTTTGTCA+TGG - Chr4:85608373-85608392 MsG0480023467.01.T01:intron 25.0%
!!! AGTACTGATATTGAAATAGT+TGG - Chr4:85612298-85612317 MsG0480023467.01.T01:CDS 25.0%
!!! CACATTTTAAGGTGAATAAT+TGG - Chr4:85611227-85611246 MsG0480023467.01.T01:CDS 25.0%
!!! CATATAGCAGTTTTGTTTTT+TGG - Chr4:85609939-85609958 MsG0480023467.01.T01:intron 25.0%
!!! GGTGTTTTTTATCAAAAAGA+TGG + Chr4:85608214-85608233 None:intergenic 25.0%
!!! GTGTTGTTCATAATTTTCAA+AGG + Chr4:85609646-85609665 None:intergenic 25.0%
!!! TATTTGGCCTTTTTATAGTT+GGG - Chr4:85610276-85610295 MsG0480023467.01.T01:intron 25.0%
!!! TCCAAAGTTTCATTTTGTTT+TGG - Chr4:85610798-85610817 MsG0480023467.01.T01:intron 25.0%
AAGCTATAAACCCTAATGTT+TGG + Chr4:85611891-85611910 None:intergenic 30.0%
AATCAACTTGCAATTATGTC+TGG - Chr4:85612110-85612129 MsG0480023467.01.T01:CDS 30.0%
AGAAATGATACCTCACTTTA+AGG + Chr4:85611575-85611594 None:intergenic 30.0%
ATAATAAGGAAAACACCAGA+AGG - Chr4:85608525-85608544 MsG0480023467.01.T01:intron 30.0%
ATCAACATGTGTGGATAATA+TGG + Chr4:85609208-85609227 None:intergenic 30.0%
ATCAACTTGCAATTATGTCT+GGG - Chr4:85612111-85612130 MsG0480023467.01.T01:CDS 30.0%
ATCATTGTTGGAACATTTCT+AGG + Chr4:85609450-85609469 None:intergenic 30.0%
ATTAAAAAACATACTCCCTC+CGG - Chr4:85611647-85611666 MsG0480023467.01.T01:CDS 30.0%
ATTCGCTATTTATACTCTTG+AGG - Chr4:85614038-85614057 MsG0480023467.01.T01:CDS 30.0%
ATTTCTTATAGTTACTACCG+AGG + Chr4:85612340-85612359 None:intergenic 30.0%
CAACAAATTCAAGTAAAAGG+TGG + Chr4:85613995-85614014 None:intergenic 30.0%
CAATTGAATCATCATTCACA+TGG + Chr4:85610190-85610209 None:intergenic 30.0%
CATATACATGGTATGTTGTA+TGG - Chr4:85607947-85607966 MsG0480023467.01.T01:intron 30.0%
CATTATAGTTATAACCACCA+TGG + Chr4:85609295-85609314 None:intergenic 30.0%
CCAACTATGATAACAACAAA+TGG - Chr4:85607638-85607657 MsG0480023467.01.T01:three_prime_UTR 30.0%
CGGTTTCATTAATTGCTTAT+TGG + Chr4:85613173-85613192 None:intergenic 30.0%
CTGTACAAAATGTACATACA+AGG - Chr4:85610692-85610711 MsG0480023467.01.T01:intron 30.0%
GAATCCAAACATTTCTATTC+CGG + Chr4:85613733-85613752 None:intergenic 30.0%
GCCAAAACAAAATGAAACTT+TGG + Chr4:85610802-85610821 None:intergenic 30.0%
GTAAATTACTAATTCCATGC+AGG - Chr4:85609245-85609264 MsG0480023467.01.T01:intron 30.0%
TAATCTTCATTTGTCAACAC+TGG + Chr4:85610473-85610492 None:intergenic 30.0%
TATCAAATGTCAGTTTCTGA+CGG - Chr4:85608873-85608892 MsG0480023467.01.T01:CDS 30.0%
TCATTGTTGGAACATTTCTA+GGG + Chr4:85609449-85609468 None:intergenic 30.0%
TGAAAATTATGAACAACACG+CGG - Chr4:85609647-85609666 MsG0480023467.01.T01:intron 30.0%
TGGACAACATAGATACATAT+TGG + Chr4:85609510-85609529 None:intergenic 30.0%
TGTTGTTCAGTTATTGTTTC+TGG - Chr4:85613357-85613376 MsG0480023467.01.T01:CDS 30.0%
TTGTAAGACCAATAATCATG+TGG - Chr4:85608502-85608521 MsG0480023467.01.T01:intron 30.0%
TTGTGGTCAAATATGTCATA+AGG + Chr4:85613040-85613059 None:intergenic 30.0%
TTTCTTATAGTTACTACCGA+GGG + Chr4:85612339-85612358 None:intergenic 30.0%
! AACTTCTGAATTTAAGGCAA+AGG + Chr4:85613552-85613571 None:intergenic 30.0%
! AATTTGCTTATAGTAGTGAC+CGG + Chr4:85611669-85611688 None:intergenic 30.0%
! ACTGTTTGTTGCTTATGAAA+AGG + Chr4:85609777-85609796 None:intergenic 30.0%
! AGTTACTTTGGCTTCTATAA+TGG - Chr4:85608437-85608456 MsG0480023467.01.T01:intron 30.0%
! ATAACTTGTAGAATGAAGAG+AGG + Chr4:85607701-85607720 None:intergenic 30.0%
! ATTGGAACTCATTCTGTTTT+TGG - Chr4:85608621-85608640 MsG0480023467.01.T01:intron 30.0%
! CAAGAGTATAAATAGCGAAT+GGG + Chr4:85614038-85614057 None:intergenic 30.0%
! CTGTTTGTTGCTTATGAAAA+GGG + Chr4:85609776-85609795 None:intergenic 30.0%
! CTTGTATGTACATTTTGTAC+AGG + Chr4:85610694-85610713 None:intergenic 30.0%
! CTTTAAAAAACATACTCCTC+CGG - Chr4:85611693-85611712 MsG0480023467.01.T01:CDS 30.0%
! CTTTTTGGATTATCTGCATA+GGG - Chr4:85613934-85613953 MsG0480023467.01.T01:intron 30.0%
! TCAAGAGTATAAATAGCGAA+TGG + Chr4:85614039-85614058 None:intergenic 30.0%
! TGTGAGATTCTACTTGTTAA+TGG - Chr4:85612163-85612182 MsG0480023467.01.T01:CDS 30.0%
! TTGATAATATGCATAGGTCA+AGG + Chr4:85611270-85611289 None:intergenic 30.0%
! TTGATGAGAAGTTTTTGCAT+TGG - Chr4:85610153-85610172 MsG0480023467.01.T01:intron 30.0%
! TTGGTAGTTCAACAATATGT+TGG - Chr4:85610419-85610438 MsG0480023467.01.T01:intron 30.0%
! TTGTGCAAAATTGATTCAGA+AGG - Chr4:85613651-85613670 MsG0480023467.01.T01:CDS 30.0%
!! AACTTTTTGATCTGGGATTA+AGG + Chr4:85612499-85612518 None:intergenic 30.0%
!! AAGGTTGTACACTATTTCTA+TGG + Chr4:85613293-85613312 None:intergenic 30.0%
!! CCATTTGTTGTTATCATAGT+TGG + Chr4:85607641-85607660 None:intergenic 30.0%
!! GATAGAGAAGCATTAAGTTA+TGG - Chr4:85609972-85609991 MsG0480023467.01.T01:intron 30.0%
!! GTATTTGGCCTTTTTATAGT+TGG - Chr4:85610275-85610294 MsG0480023467.01.T01:intron 30.0%
!! TTTGGTTTGATTATTCCAAC+TGG - Chr4:85608654-85608673 MsG0480023467.01.T01:intron 30.0%
!!! AATGTTTGTTTTGTGCAGAA+AGG - Chr4:85612070-85612089 MsG0480023467.01.T01:CDS 30.0%
!!! ATAGCAGTTTTGTTTTTTGG+AGG - Chr4:85609942-85609961 MsG0480023467.01.T01:intron 30.0%
!!! TAGTTGTGCATCTGTTTTTT+AGG - Chr4:85610907-85610926 MsG0480023467.01.T01:intron 30.0%
AAAAAATCAGTGGCATAGGA+TGG - Chr4:85611389-85611408 MsG0480023467.01.T01:CDS 35.0%
AAAAACAGATGCACAACTAC+AGG + Chr4:85610906-85610925 None:intergenic 35.0%
AAAACTGATCAACACAGAGT+TGG - Chr4:85608326-85608345 MsG0480023467.01.T01:intron 35.0%
AAACTGATCAACACAGAGTT+GGG - Chr4:85608327-85608346 MsG0480023467.01.T01:intron 35.0%
AAGAGGGATTGATTAAGAGA+AGG + Chr4:85612016-85612035 None:intergenic 35.0%
AAGTTATGGTTGGAGAATGT+CGG - Chr4:85609986-85610005 MsG0480023467.01.T01:intron 35.0%
ACAACAAATGGAATATGGCA+AGG - Chr4:85607650-85607669 MsG0480023467.01.T01:three_prime_UTR 35.0%
ACAAGTAGAATCTCACAAAC+AGG + Chr4:85612160-85612179 None:intergenic 35.0%
ACATTTGATCAGCTATCAGA+CGG + Chr4:85609914-85609933 None:intergenic 35.0%
ACTGCAGTCATAATATCCAT+TGG + Chr4:85612758-85612777 None:intergenic 35.0%
ATGATATTACCATTCGGAAC+AGG - Chr4:85608177-85608196 MsG0480023467.01.T01:intron 35.0%
ATGGTCAAATGAAGCTAATG+AGG - Chr4:85612473-85612492 MsG0480023467.01.T01:intron 35.0%
ATGTAAACATTAGGGACAGT+TGG - Chr4:85611854-85611873 MsG0480023467.01.T01:CDS 35.0%
ATTGAAACAATGGCAAACGT+TGG - Chr4:85608060-85608079 MsG0480023467.01.T01:CDS 35.0%
CACAAGCCAAAATAACAAGA+AGG + Chr4:85608815-85608834 None:intergenic 35.0%
CACAATCGTCTTCAACAAAA+AGG - Chr4:85611981-85612000 MsG0480023467.01.T01:CDS 35.0%
CATAAGCAACAAACAGTTGA+TGG - Chr4:85609780-85609799 MsG0480023467.01.T01:intron 35.0%
CCACTAATTGCAAAAAAGAG+AGG + Chr4:85608738-85608757 None:intergenic 35.0%
CCTATGCAGATAATCCAAAA+AGG + Chr4:85613936-85613955 None:intergenic 35.0%
CTTAATGCTTCTCTATCATC+TGG + Chr4:85609969-85609988 None:intergenic 35.0%
CTTCATGCATTGTAGAGTAA+GGG + Chr4:85609707-85609726 None:intergenic 35.0%
GCTGGTATGATATTACCATT+CGG - Chr4:85608171-85608190 MsG0480023467.01.T01:intron 35.0%
GTCCATTTAGTTGAACTTAC+CGG - Chr4:85609525-85609544 MsG0480023467.01.T01:intron 35.0%
GTTGGAATTCTAGTAGATAG+AGG - Chr4:85609873-85609892 MsG0480023467.01.T01:intron 35.0%
TAAAAGGTGGCAATGAGAAT+GGG + Chr4:85613982-85614001 None:intergenic 35.0%
TAAGATATCATTCCCCTTGA+TGG + Chr4:85609360-85609379 None:intergenic 35.0%
TCAATAAGAGCAAAACCAAG+TGG + Chr4:85608681-85608700 None:intergenic 35.0%
TCACACGTTGAGCTAAAAAA+TGG + Chr4:85610745-85610764 None:intergenic 35.0%
TCATCCGGAATAGAAATGTT+TGG - Chr4:85613726-85613745 MsG0480023467.01.T01:CDS 35.0%
TCATTTCATGCATCACAGTT+AGG + Chr4:85613258-85613277 None:intergenic 35.0%
TCTTCATGCATTGTAGAGTA+AGG + Chr4:85609708-85609727 None:intergenic 35.0%
TCTTGTTCTTAACATCGGTA+GGG - Chr4:85608941-85608960 MsG0480023467.01.T01:CDS 35.0%
TGCTCTTATTGAAAAGCTTG+AGG - Chr4:85608689-85608708 MsG0480023467.01.T01:intron 35.0%
TGCTTATAATAGTGACTGGA+GGG - Chr4:85611828-85611847 MsG0480023467.01.T01:CDS 35.0%
TGTAAACATTAGGGACAGTT+GGG - Chr4:85611855-85611874 MsG0480023467.01.T01:CDS 35.0%
TTCATGCATTGTAGAGTAAG+GGG + Chr4:85609706-85609725 None:intergenic 35.0%
TTCTTGTTCTTAACATCGGT+AGG - Chr4:85608940-85608959 MsG0480023467.01.T01:CDS 35.0%
TTGATTCAGAAGGAAAAGCT+AGG - Chr4:85613661-85613680 MsG0480023467.01.T01:CDS 35.0%
TTGCAATATGCCTAGATTTG+TGG - Chr4:85613862-85613881 MsG0480023467.01.T01:intron 35.0%
TTGCTTATAATAGTGACTGG+AGG - Chr4:85611827-85611846 MsG0480023467.01.T01:CDS 35.0%
TTTCTATTCTTGGTTGGAGT+AGG - Chr4:85608093-85608112 MsG0480023467.01.T01:intron 35.0%
! AACAAAGTGAGATTTGGTTG+TGG + Chr4:85612045-85612064 None:intergenic 35.0%
! AATGATACCTCACTTTAAGG+AGG + Chr4:85611572-85611591 None:intergenic 35.0%
! AATTTTGCACAACTGCATGA+AGG + Chr4:85613643-85613662 None:intergenic 35.0%
! ACAAAGTGAGATTTGGTTGT+GGG + Chr4:85612044-85612063 None:intergenic 35.0%
! ACTTTTCACGCCAAACATTA+GGG - Chr4:85611878-85611897 MsG0480023467.01.T01:CDS 35.0%
! ATTTGCAGAACTAGGGTTTT+CGG - Chr4:85611955-85611974 MsG0480023467.01.T01:CDS 35.0%
! CATTGCGATCATTGATTATG+AGG - Chr4:85612444-85612463 MsG0480023467.01.T01:CDS 35.0%
! CATTGTTGGAACATTTCTAG+GGG + Chr4:85609448-85609467 None:intergenic 35.0%
! CCTTTTTGGATTATCTGCAT+AGG - Chr4:85613933-85613952 MsG0480023467.01.T01:intron 35.0%
! GAGGGAGTATGTAAACATTA+GGG - Chr4:85611846-85611865 MsG0480023467.01.T01:CDS 35.0%
! GCGAATTCGCTAATACATTT+TGG + Chr4:85609845-85609864 None:intergenic 35.0%
! GTCAAGGTATGTTTTTCATC+CGG - Chr4:85613711-85613730 MsG0480023467.01.T01:CDS 35.0%
! TACTAATTCCATGCAGGTTT+TGG - Chr4:85609251-85609270 MsG0480023467.01.T01:intron 35.0%
! TATCTGCATAGGGATTTTGA+TGG - Chr4:85613944-85613963 MsG0480023467.01.T01:CDS 35.0%
! TGTGATGGTGATTGAAACAA+TGG - Chr4:85608050-85608069 MsG0480023467.01.T01:CDS 35.0%
! TGTTATTGCTTATTGGTGCT+CGG + Chr4:85613193-85613212 None:intergenic 35.0%
! TGTTTTGTCATGGGTACTTT+TGG - Chr4:85608383-85608402 MsG0480023467.01.T01:intron 35.0%
! TTCATCGTTATTTCATCTCC+AGG + Chr4:85610050-85610069 None:intergenic 35.0%
!! ATTGTTTCTGGTGTATTCCT+TGG - Chr4:85613369-85613388 MsG0480023467.01.T01:CDS 35.0%
!! GAGAAGCATTAAGTTATGGT+TGG - Chr4:85609976-85609995 MsG0480023467.01.T01:intron 35.0%
!! GATCTGATTTTCTAGAGGTA+TGG + Chr4:85609575-85609594 None:intergenic 35.0%
!! TTGTTTCTGGTGTATTCCTT+GGG - Chr4:85613370-85613389 MsG0480023467.01.T01:CDS 35.0%
!! TTTTCCTCTAAGAAGTGTGA+TGG - Chr4:85608035-85608054 MsG0480023467.01.T01:CDS 35.0%
!!! CATATTGGCGACTTTTTTGT+TGG + Chr4:85609495-85609514 None:intergenic 35.0%
!!! CCTCTCTTTTTTGCAATTAG+TGG - Chr4:85608735-85608754 MsG0480023467.01.T01:intron 35.0%
!!! CGACTTTTTTGTTGGATTTG+AGG + Chr4:85609487-85609506 None:intergenic 35.0%
!!! CTTGTTATTTTGGCTTGTGT+TGG - Chr4:85608816-85608835 MsG0480023467.01.T01:CDS 35.0%
!!! GTTTTTGGAGCTTTTGTGTT+TGG - Chr4:85608636-85608655 MsG0480023467.01.T01:intron 35.0%
!!! TTTTGTTGGTTCCTGATACT+TGG - Chr4:85610571-85610590 MsG0480023467.01.T01:intron 35.0%
AAAAACTCAAGACGCACACA+TGG + Chr4:85612626-85612645 None:intergenic 40.0%
AAAGGTTGTAAACAATGGCG+AGG - Chr4:85610220-85610239 MsG0480023467.01.T01:intron 40.0%
AAATGCTAGTGGTGCGAAAT+CGG + Chr4:85611939-85611958 None:intergenic 40.0%
AACACCGAGAAAGCTTATGT+AGG - Chr4:85608228-85608247 MsG0480023467.01.T01:intron 40.0%
AAGATTTCAGCTATAACGCG+TGG + Chr4:85607779-85607798 None:intergenic 40.0%
ACGCGTTATAGCTGAAATCT+TGG - Chr4:85607778-85607797 MsG0480023467.01.T01:three_prime_UTR 40.0%
ACTAGAATTCCAACCGAACA+AGG + Chr4:85609867-85609886 None:intergenic 40.0%
AGCTCCTACATAAGCTTTCT+CGG + Chr4:85608235-85608254 None:intergenic 40.0%
AGGTCTATGGGTGATGTATT+TGG - Chr4:85610260-85610279 MsG0480023467.01.T01:intron 40.0%
ATAACACACCATCTCATCTG+CGG + Chr4:85607615-85607634 None:intergenic 40.0%
ATCACCATCACACTTCTTAG+AGG + Chr4:85608042-85608061 None:intergenic 40.0%
ATGACTGGATTGATTGTACC+TGG - Chr4:85609315-85609334 MsG0480023467.01.T01:intron 40.0%
ATGGTATGTTGTATGGATGC+AGG - Chr4:85607954-85607973 MsG0480023467.01.T01:intron 40.0%
ATTATTCCAACTGGACCACT+TGG - Chr4:85608663-85608682 MsG0480023467.01.T01:intron 40.0%
ATTGAGACTGCCACAAATCT+AGG + Chr4:85613875-85613894 None:intergenic 40.0%
ATTGGCACCTCTCATGATTA+GGG + Chr4:85613155-85613174 None:intergenic 40.0%
CAACCTTTGAATGTCAAGAG+CGG - Chr4:85613306-85613325 MsG0480023467.01.T01:CDS 40.0%
CACTAGCATTTGCAGAACTA+GGG - Chr4:85611948-85611967 MsG0480023467.01.T01:CDS 40.0%
CAGATAATCCAAAAAGGCGA+AGG + Chr4:85613930-85613949 None:intergenic 40.0%
CGGAATGGAATCAACAAACA+TGG - Chr4:85609803-85609822 MsG0480023467.01.T01:intron 40.0%
GACCGGTAAGTTCAACTAAA+TGG + Chr4:85609530-85609549 None:intergenic 40.0%
GGTTTCATCACAGATGCTAT+TGG - Chr4:85608603-85608622 MsG0480023467.01.T01:intron 40.0%
GTAAAAGGTGGCAATGAGAA+TGG + Chr4:85613983-85614002 None:intergenic 40.0%
GTCCTCTCCCAACTATAAAA+AGG + Chr4:85610286-85610305 None:intergenic 40.0%
GTCTTTACCTCCTTAAAGTG+AGG - Chr4:85611562-85611581 MsG0480023467.01.T01:CDS 40.0%
GTTCAACAATATGTTGGAGC+TGG - Chr4:85610425-85610444 MsG0480023467.01.T01:intron 40.0%
TAACATCGGTAGGGATCAAA+AGG - Chr4:85608950-85608969 MsG0480023467.01.T01:CDS 40.0%
TATCATACCAGCTACTGCTA+TGG + Chr4:85608163-85608182 None:intergenic 40.0%
TATGAAGACGAAGATTCGAG+TGG + Chr4:85607738-85607757 None:intergenic 40.0%
TATTGGCACCTCTCATGATT+AGG + Chr4:85613156-85613175 None:intergenic 40.0%
TCACCAATAGCTCCTAATTC+AGG + Chr4:85610359-85610378 None:intergenic 40.0%
TGCAACAATTGCTTCAGTGT+TGG - Chr4:85610400-85610419 MsG0480023467.01.T01:intron 40.0%
TGGTATGTTGTATGGATGCA+GGG - Chr4:85607955-85607974 MsG0480023467.01.T01:intron 40.0%
TGTCCTGAATTAGGAGCTAT+TGG - Chr4:85610353-85610372 MsG0480023467.01.T01:intron 40.0%
TTCACCAACTTGACGTAATC+AGG + Chr4:85612902-85612921 None:intergenic 40.0%
TTCAGAAGGAAAAGCTAGGA+AGG - Chr4:85613665-85613684 MsG0480023467.01.T01:CDS 40.0%
TTGTTGTCACACCAAGTATC+AGG + Chr4:85610585-85610604 None:intergenic 40.0%
TTGTTTCGACCAAGAACAGA+AGG + Chr4:85607997-85608016 None:intergenic 40.0%
TTTATAGTTGGGAGAGGACA+AGG - Chr4:85610287-85610306 MsG0480023467.01.T01:intron 40.0%
TTTCATGCATCACAGTTAGG+AGG + Chr4:85613255-85613274 None:intergenic 40.0%
TTTGGCCATAGCAATTGCTA+TGG - Chr4:85608401-85608420 MsG0480023467.01.T01:intron 40.0%
! AAGCTTGAGGACTTTGTTTC+TGG - Chr4:85608702-85608721 MsG0480023467.01.T01:intron 40.0%
! AGAGGAAGAGCATAGTCTAA+AGG + Chr4:85607683-85607702 None:intergenic 40.0%
! ATTAGCGAATTCGCCTTGTT+CGG - Chr4:85609851-85609870 MsG0480023467.01.T01:intron 40.0%
! ATTTTTGTAGGATTTCGGCG+AGG - Chr4:85613791-85613810 MsG0480023467.01.T01:intron 40.0%
! CTCTAGAAAATCAGATCACC+CGG - Chr4:85609578-85609597 MsG0480023467.01.T01:intron 40.0%
! GACTTTTCACGCCAAACATT+AGG - Chr4:85611877-85611896 MsG0480023467.01.T01:CDS 40.0%
! GAGGAAGAGCATAGTCTAAA+GGG + Chr4:85607682-85607701 None:intergenic 40.0%
! GATTTTTGCCTTCGCCTTTT+TGG - Chr4:85613919-85613938 MsG0480023467.01.T01:intron 40.0%
! GGAGCTTTTGTTCTAATGCT+TGG - Chr4:85608249-85608268 MsG0480023467.01.T01:intron 40.0%
! GGAGGGAGTATGTAAACATT+AGG - Chr4:85611845-85611864 MsG0480023467.01.T01:CDS 40.0%
! TCAAGGAGGTTGATCATTGT+TGG + Chr4:85609462-85609481 None:intergenic 40.0%
! TTGTTGGATTTGAGGCTTCA+AGG + Chr4:85609479-85609498 None:intergenic 40.0%
!! AAGCAACAAACAGTTGATGG+CGG - Chr4:85609783-85609802 MsG0480023467.01.T01:intron 40.0%
!!! TGATCAGTTTTAGCTCTGCA+AGG + Chr4:85608317-85608336 None:intergenic 40.0%
AAAACAGATTGATGCCCCCT+CGG + Chr4:85610521-85610540 None:intergenic 45.0%
AAGGCGAAGGCAAAAATCAC+AGG + Chr4:85613917-85613936 None:intergenic 45.0%
AATAGTGCTCCTGTTCCGAA+TGG + Chr4:85608189-85608208 None:intergenic 45.0%
ACAGAGTTCAGAGAGGATAC+AGG + Chr4:85613498-85613517 None:intergenic 45.0%
ACATACCTTGACAACCACAC+AGG + Chr4:85613703-85613722 None:intergenic 45.0%
AGAGAGGATACAGGGTAAGA+GGG + Chr4:85613489-85613508 None:intergenic 45.0%
AGTGGCCTAAAGACTAACGT+TGG - Chr4:85608753-85608772 MsG0480023467.01.T01:CDS 45.0%
ATAACGCGTGGTTGACGAAT+GGG + Chr4:85607767-85607786 None:intergenic 45.0%
ATCCTGACCCTAATCATGAG+AGG - Chr4:85613145-85613164 MsG0480023467.01.T01:CDS 45.0%
ATGCAAAGACCCTTGGAGAA+TGG - Chr4:85612966-85612985 MsG0480023467.01.T01:CDS 45.0%
ATGCAGGGAGGGATAGTATT+GGG - Chr4:85607970-85607989 MsG0480023467.01.T01:intron 45.0%
ATGTTGTATGGATGCAGGGA+GGG - Chr4:85607959-85607978 MsG0480023467.01.T01:intron 45.0%
ATTCTTGGTTGGAGTAGGCA+TGG - Chr4:85608098-85608117 MsG0480023467.01.T01:intron 45.0%
CAGAGTTCAGAGAGGATACA+GGG + Chr4:85613497-85613516 None:intergenic 45.0%
CCAACCTGATTACGTCAAGT+TGG - Chr4:85612895-85612914 MsG0480023467.01.T01:CDS 45.0%
CCAACTTGACGTAATCAGGT+TGG + Chr4:85612898-85612917 None:intergenic 45.0%
CCACTAGCATTTGCAGAACT+AGG - Chr4:85611947-85611966 MsG0480023467.01.T01:CDS 45.0%
CTAGCAGGTGTGATGATATC+AGG - Chr4:85608582-85608601 MsG0480023467.01.T01:intron 45.0%
CTCTGCCATAGCAATTGCTA+TGG + Chr4:85608409-85608428 None:intergenic 45.0%
CTGCATTTCCTGTTCTTGCT+AGG - Chr4:85608289-85608308 MsG0480023467.01.T01:intron 45.0%
GACACTGTGTTCAGCACAAA+GGG + Chr4:85612927-85612946 None:intergenic 45.0%
GATCTGATAGTCATAGCCCT+CGG - Chr4:85612320-85612339 MsG0480023467.01.T01:CDS 45.0%
GATTTGCACCACGATGTTGA+GGG + Chr4:85613128-85613147 None:intergenic 45.0%
GGAAAAGCTAGGAAGGTAAC+TGG - Chr4:85613672-85613691 MsG0480023467.01.T01:CDS 45.0%
GGCATGCTCATGAACACAAA+AGG - Chr4:85608906-85608925 MsG0480023467.01.T01:CDS 45.0%
GTATTGGGTCCTTCTGTTCT+TGG - Chr4:85607985-85608004 MsG0480023467.01.T01:intron 45.0%
GTTCCAAATGCAAAGACCCT+TGG - Chr4:85612959-85612978 MsG0480023467.01.T01:CDS 45.0%
TAAGGGGAGATTGCTGTCAA+AGG + Chr4:85609690-85609709 None:intergenic 45.0%
TATAACGCGTGGTTGACGAA+TGG + Chr4:85607768-85607787 None:intergenic 45.0%
TATGTTGTATGGATGCAGGG+AGG - Chr4:85607958-85607977 MsG0480023467.01.T01:intron 45.0%
TCAGTTACCATAGCAGTAGC+TGG - Chr4:85608153-85608172 MsG0480023467.01.T01:intron 45.0%
TCCAGGAACAAAACGCATCA+CGG + Chr4:85610033-85610052 None:intergenic 45.0%
TCTCCAAGGGTCTTTGCATT+TGG + Chr4:85612965-85612984 None:intergenic 45.0%
TGACACTGTGTTCAGCACAA+AGG + Chr4:85612928-85612947 None:intergenic 45.0%
TGAGGTTACAGAGTTCAGAG+AGG + Chr4:85613505-85613524 None:intergenic 45.0%
TGCAAAGACCCTTGGAGAAT+GGG - Chr4:85612967-85612986 MsG0480023467.01.T01:CDS 45.0%
TGCTTATAGTAGTGACCGGA+GGG + Chr4:85611665-85611684 None:intergenic 45.0%
TGGAGAATGTCGGAACATTC+TGG - Chr4:85609996-85610015 MsG0480023467.01.T01:intron 45.0%
TGGAGTGAGTGTCCTGAATT+AGG - Chr4:85610344-85610363 MsG0480023467.01.T01:intron 45.0%
TTGAGAAAGTCACGCGCTTA+TGG - Chr4:85612788-85612807 MsG0480023467.01.T01:CDS 45.0%
TTGCTTATAGTAGTGACCGG+AGG + Chr4:85611666-85611685 None:intergenic 45.0%
TTGGTTGTGGGTGATGAAGA+GGG + Chr4:85612032-85612051 None:intergenic 45.0%
TTTGGTTGTGGGTGATGAAG+AGG + Chr4:85612033-85612052 None:intergenic 45.0%
! AAAGGCGACACGCTTTTCTT+CGG + Chr4:85609745-85609764 None:intergenic 45.0%
! AGCTGGTACTGAAGATGGAT+TGG - Chr4:85610442-85610461 MsG0480023467.01.T01:intron 45.0%
! CGGGTGATCTGATTTTCTAG+AGG + Chr4:85609580-85609599 None:intergenic 45.0%
! GCTGGTACTGAAGATGGATT+GGG - Chr4:85610443-85610462 MsG0480023467.01.T01:intron 45.0%
! GGCCTTTTTATAGTTGGGAG+AGG - Chr4:85610281-85610300 MsG0480023467.01.T01:intron 45.0%
! TTGGATTTGAGGCTTCAAGG+AGG + Chr4:85609476-85609495 None:intergenic 45.0%
!! ACAAACAGTTGATGGCGGAA+TGG - Chr4:85609788-85609807 MsG0480023467.01.T01:intron 45.0%
!! ATAATATCCATTGGCTCCCC+TGG + Chr4:85612749-85612768 None:intergenic 45.0%
!! CCTAGTTCTGCAAATGCTAG+TGG + Chr4:85611950-85611969 None:intergenic 45.0%
!! TGAGGCCAACGTTAGTCTTT+AGG + Chr4:85608761-85608780 None:intergenic 45.0%
!! TTTGGCTTGTGTTGGCAAAG+TGG - Chr4:85608824-85608843 MsG0480023467.01.T01:CDS 45.0%
!!! TCCATGCAGGTTTTGGATGA+GGG - Chr4:85609258-85609277 MsG0480023467.01.T01:intron 45.0%
!!! TTCCATGCAGGTTTTGGATG+AGG - Chr4:85609257-85609276 MsG0480023467.01.T01:intron 45.0%
!! ATAAAAAAAATAATACTAAT+AGG - Chr4:85611612-85611631 MsG0480023467.01.T01:CDS 5.0%
!!! AAATTAAAAAATTTAATTTG+TGG - Chr4:85612418-85612437 MsG0480023467.01.T01:CDS 5.0%
!!! TATTTTATTTTTTTTAAGAA+AGG - Chr4:85611421-85611440 MsG0480023467.01.T01:CDS 5.0%
ACAGCTCTGTGTTCTTGCTG+AGG - Chr4:85612865-85612884 MsG0480023467.01.T01:CDS 50.0%
AGAAAGTCACGCGCTTATGG+TGG - Chr4:85612791-85612810 MsG0480023467.01.T01:CDS 50.0%
AGGAGTTATATCGCCGCTGA+CGG - Chr4:85610307-85610326 MsG0480023467.01.T01:intron 50.0%
ATCATTCTGTTACACCGCCG+AGG - Chr4:85610501-85610520 MsG0480023467.01.T01:intron 50.0%
ATGTAGCAGCACCATCGATG+AGG + Chr4:85608779-85608798 None:intergenic 50.0%
ATTCCAGCTGCAGCAACAAC+TGG + Chr4:85612725-85612744 None:intergenic 50.0%
CACCTCTCATGATTAGGGTC+AGG + Chr4:85613150-85613169 None:intergenic 50.0%
CAGAGAGGATACAGGGTAAG+AGG + Chr4:85613490-85613509 None:intergenic 50.0%
CCACCGCTCTTGACATTCAA+AGG + Chr4:85613312-85613331 None:intergenic 50.0%
CCTTTGAATGTCAAGAGCGG+TGG - Chr4:85613309-85613328 MsG0480023467.01.T01:CDS 50.0%
CTGGTGTATTCCTTGGGTCT+GGG - Chr4:85613376-85613395 MsG0480023467.01.T01:CDS 50.0%
GAGAGGATACAGGGTAAGAG+GGG + Chr4:85613488-85613507 None:intergenic 50.0%
GATCAACACAGAGTTGGGCA+GGG - Chr4:85608332-85608351 MsG0480023467.01.T01:intron 50.0%
GATGCAGGGAGGGATAGTAT+TGG - Chr4:85607969-85607988 MsG0480023467.01.T01:intron 50.0%
GCAAAACCAAGTGGTCCAGT+TGG + Chr4:85608672-85608691 None:intergenic 50.0%
GCAAGGATCCTAGCAAGAAC+AGG + Chr4:85608300-85608319 None:intergenic 50.0%
GGATTTGCACCACGATGTTG+AGG + Chr4:85613129-85613148 None:intergenic 50.0%
GGGAGATTGCTGTCAAAGGT+TGG + Chr4:85609686-85609705 None:intergenic 50.0%
TACACCAGCCCATTCTCCAA+GGG + Chr4:85612978-85612997 None:intergenic 50.0%
TATAGTCGGCGAGATTCACG+TGG + Chr4:85612575-85612594 None:intergenic 50.0%
TCATTCTGTTACACCGCCGA+GGG - Chr4:85610502-85610521 MsG0480023467.01.T01:intron 50.0%
TCCCTCATCCAAAACCTGCA+TGG + Chr4:85609262-85609281 None:intergenic 50.0%
TCGCTAAACGTTTCGCCTTC+TGG + Chr4:85608543-85608562 None:intergenic 50.0%
TCTGGTGTATTCCTTGGGTC+TGG - Chr4:85613375-85613394 MsG0480023467.01.T01:CDS 50.0%
TGACATCTCCCTCAACATCG+TGG - Chr4:85613117-85613136 MsG0480023467.01.T01:CDS 50.0%
TGATCAACACAGAGTTGGGC+AGG - Chr4:85608331-85608350 MsG0480023467.01.T01:intron 50.0%
TGGTGTATTCCTTGGGTCTG+GGG - Chr4:85613377-85613396 MsG0480023467.01.T01:CDS 50.0%
TTACACCAGCCCATTCTCCA+AGG + Chr4:85612979-85612998 None:intergenic 50.0%
TTGCTCCTGTGTGGTTGTCA+AGG - Chr4:85613695-85613714 MsG0480023467.01.T01:CDS 50.0%
TTGCTGCAGCTGGAATTCCA+GGG - Chr4:85612729-85612748 MsG0480023467.01.T01:intron 50.0%
! ACTAACGTTGGCCTCATCGA+TGG - Chr4:85608765-85608784 MsG0480023467.01.T01:CDS 50.0%
! GCTTGTGTTGGCAAAGTGGT+TGG - Chr4:85608828-85608847 MsG0480023467.01.T01:CDS 50.0%
! GTTGGAGCTGGTACTGAAGA+TGG - Chr4:85610437-85610456 MsG0480023467.01.T01:intron 50.0%
! TGCAGAACTAGGGTTTTCGG+CGG - Chr4:85611958-85611977 MsG0480023467.01.T01:CDS 50.0%
!! ACCGTGATGCGTTTTGTTCC+TGG - Chr4:85610029-85610048 MsG0480023467.01.T01:intron 50.0%
!! CATCGATGGTGCTGCTACAT+GGG - Chr4:85608779-85608798 MsG0480023467.01.T01:CDS 50.0%
!! TCATCGATGGTGCTGCTACA+TGG - Chr4:85608778-85608797 MsG0480023467.01.T01:CDS 50.0%
!! TGAGGGAGCATTTGCAACCA+TGG - Chr4:85609275-85609294 MsG0480023467.01.T01:intron 50.0%
AAGACCCTTGGAGAATGGGC+TGG - Chr4:85612971-85612990 MsG0480023467.01.T01:CDS 55.0%
AGGAAACTGTCGCGGCGATA+AGG - Chr4:85610240-85610259 MsG0480023467.01.T01:intron 55.0%
ATTCTGTTACACCGCCGAGG+GGG - Chr4:85610504-85610523 MsG0480023467.01.T01:intron 55.0%
CAATGGCGAGGAAACTGTCG+CGG - Chr4:85610232-85610251 MsG0480023467.01.T01:intron 55.0%
CAGATCACCCGGCTCTTAAC+AGG - Chr4:85609589-85609608 MsG0480023467.01.T01:intron 55.0%
CATTCTGTTACACCGCCGAG+GGG - Chr4:85610503-85610522 MsG0480023467.01.T01:intron 55.0%
CTTCCGTCCTGTTAAGAGCC+GGG + Chr4:85609599-85609618 None:intergenic 55.0%
GAACGCAACCGCAGATGAGA+TGG - Chr4:85607604-85607623 MsG0480023467.01.T01:three_prime_UTR 55.0%
GCATCTGCACTACGACGCAT+TGG - Chr4:85608123-85608142 MsG0480023467.01.T01:intron 55.0%
GCTTCCGTCCTGTTAAGAGC+CGG + Chr4:85609600-85609619 None:intergenic 55.0%
GGTAACTGGTTGCTCCTGTG+TGG - Chr4:85613686-85613705 MsG0480023467.01.T01:CDS 55.0%
GTCGCGGCGATAAGGTCTAT+GGG - Chr4:85610248-85610267 MsG0480023467.01.T01:intron 55.0%
GTTGCTGCAGCTGGAATTCC+AGG - Chr4:85612728-85612747 MsG0480023467.01.T01:intron 55.0%
GTTTCTGACGGAGCTGCACT+TGG - Chr4:85608885-85608904 MsG0480023467.01.T01:CDS 55.0%
TCACCCGGCTCTTAACAGGA+CGG - Chr4:85609593-85609612 MsG0480023467.01.T01:intron 55.0%
TGACGGCAGGGCTAACAGAT+TGG - Chr4:85610324-85610343 MsG0480023467.01.T01:intron 55.0%
TGCTGCAGCTGGAATTCCAG+GGG - Chr4:85612730-85612749 MsG0480023467.01.T01:intron 55.0%
TGGAATTCCAGGGGAGCCAA+TGG - Chr4:85612739-85612758 MsG0480023467.01.T01:intron 55.0%
TGTATTCCTTGGGTCTGGGG+AGG - Chr4:85613380-85613399 MsG0480023467.01.T01:CDS 55.0%
TGTCGCGGCGATAAGGTCTA+TGG - Chr4:85610247-85610266 MsG0480023467.01.T01:intron 55.0%
TTATATCGCCGCTGACGGCA+GGG - Chr4:85610312-85610331 MsG0480023467.01.T01:intron 55.0%
! GCGAATTCGCCTTGTTCGGT+TGG - Chr4:85609855-85609874 MsG0480023467.01.T01:intron 55.0%
! GCTTATGGTGGTCTTGCACG+TGG - Chr4:85612803-85612822 MsG0480023467.01.T01:CDS 55.0%
!! GAGTAGTGCTGACGTTCGAC+CGG + Chr4:85609547-85609566 None:intergenic 55.0%
!! GGGAGCATTTGCAACCATGG+TGG - Chr4:85609278-85609297 MsG0480023467.01.T01:intron 55.0%
ACAGATTGATGCCCCCTCGG+CGG + Chr4:85610518-85610537 None:intergenic 60.0%
GAGCCAGTTGTTGCTGCAGC+TGG - Chr4:85612719-85612738 MsG0480023467.01.T01:intron 60.0%
GTTATATCGCCGCTGACGGC+AGG - Chr4:85610311-85610330 MsG0480023467.01.T01:intron 60.0%
TCTGTTAGCCCTGCCGTCAG+CGG + Chr4:85610323-85610342 None:intergenic 60.0%
AACCAGCCTCCCCAGACCCA+AGG + Chr4:85613389-85613408 None:intergenic 65.0%
TTCCTTGGGTCTGGGGAGGC+TGG - Chr4:85613384-85613403 MsG0480023467.01.T01:CDS 65.0%
! TGGGTCTGGGGAGGCTGGTT+CGG - Chr4:85613389-85613408 MsG0480023467.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 85607602 85614134 85607602 ID=MsG0480023467.01;Name=MsG0480023467.01
Chr4 mRNA 85607602 85614134 85607602 ID=MsG0480023467.01.T01;Parent=MsG0480023467.01;Name=MsG0480023467.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0.4|0.5|1|1|1|6|274|967
Chr4 exon 85607602 85607935 85607602 ID=MsG0480023467.01.T01:exon:2908;Parent=MsG0480023467.01.T01
Chr4 exon 85608020 85608085 85608020 ID=MsG0480023467.01.T01:exon:2907;Parent=MsG0480023467.01.T01
Chr4 exon 85608742 85609039 85608742 ID=MsG0480023467.01.T01:exon:2906;Parent=MsG0480023467.01.T01
Chr4 exon 85611184 85612469 85611184 ID=MsG0480023467.01.T01:exon:2905;Parent=MsG0480023467.01.T01
Chr4 exon 85612765 85613760 85612765 ID=MsG0480023467.01.T01:exon:2904;Parent=MsG0480023467.01.T01
Chr4 exon 85613937 85614134 85613937 ID=MsG0480023467.01.T01:exon:2903;Parent=MsG0480023467.01.T01
Chr4 CDS 85613937 85614134 85613937 ID=MsG0480023467.01.T01:cds;Parent=MsG0480023467.01.T01
Chr4 CDS 85612765 85613760 85612765 ID=MsG0480023467.01.T01:cds;Parent=MsG0480023467.01.T01
Chr4 CDS 85611184 85612469 85611184 ID=MsG0480023467.01.T01:cds;Parent=MsG0480023467.01.T01
Chr4 CDS 85608742 85609039 85608742 ID=MsG0480023467.01.T01:cds;Parent=MsG0480023467.01.T01
Chr4 CDS 85608020 85608085 85608020 ID=MsG0480023467.01.T01:cds;Parent=MsG0480023467.01.T01
Chr4 CDS 85607876 85607935 85607876 ID=MsG0480023467.01.T01:cds;Parent=MsG0480023467.01.T01
Chr4 three_prime_UTR 85607602 85607875 85607602 ID=MsG0480023467.01.T01:three_prime_utr;Parent=MsG0480023467.01.T01
Gene Sequence

>MsG0480023467.01.T01

ATGAACGCAACCGCAGATGAGATGGTGTGTTATTCACCAACTATGATAACAACAAATGGAATATGGCAAGGAGATAACCCTTTAGACTATGCTCTTCCTCTCTTCATTCTACAAGTTATTTTAGTTGTTATTGCCACTCGAATCTTCGTCTTCATACTCAAGCCCATTCGTCAACCACGCGTTATAGCTGAAATCTTGGGAGGGATAGTATTGGGTCCTTCTGTTCTTGGTCGAAACAAAACATTTGCAGATGCTGTTTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAACGTTGGTCTTTTATATTTTCTATTCTTGGTTGGAGTAGGCATGGATGCATCTGCACTACGACGCATTGGTAGAAAATCAGTTACCATAGCAGTAGCTGGTATGATATTACCATTCGGAACAGGAGCACTATTTTCCATCTTTTTGATAAAAAACACCGAGAAAGCTTATGTAGGAGCTTTTGTTCTAATGCTTGGTGTTGTTCTTTCTGTTACTGCATTTCCTGTTCTTGCTAGGATCCTTGCAGAGCTAAAACTGATCAACACAGAGTTGGGCAGGGTTGCTCTTTCATCTGCACTCATTAATGATGTTTTGTCATGGGTACTTTTGGCCATAGCAATTGCTATGGCAGAGAATGAAAAAGTTACTTTGGCTTCTATAATGGTTGTGCTGTCAAGTGCAGCATTTGTTGCTTTTAATGTTTTTGTTGTAAGACCAATAATCATGTGGATAATAAGGAAAACACCAGAAGGCGAAACGTTTAGCGATTTCTATATTTGTTTGATACTAGCAGGTGTGATGATATCAGGTTTCATCACAGATGCTATTGGAACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGATTATTCCAACTGGACCACTTGGTTTTGCTCTTATTGAAAAGCTTGAGGACTTTGTTTCTGGACTTTTGCTTCCTCTCTTTTTTGCAATTAGTGGCCTAAAGACTAACGTTGGCCTCATCGATGGTGCTGCTACATGGGCTATTTTAATCCTTCTTGTTATTTTGGCTTGTGTTGGCAAAGTGGTTGGAACTTTAATTGTTGCTCTTAGTTATCAAATGTCAGTTTCTGACGGAGCTGCACTTGGCATGCTCATGAACACAAAAGGCCTTGTTGAAATTCTTGTTCTTAACATCGGTAGGGATCAAAAGGTTTTGGATGAGGGAGCATTTGCAACCATGGTGGTTATAACTATAATGATGACTGGATTGATTGTACCTGGAATATCAATTATATATAGACCATCAAGGGGAATGATATCTTACAAAAGAAGAACCATTCAAATGTCAAAAAAAGATGCTGAGTTTAGAGTACTAGTGTGTATTCATACCCCTAGAAATGTTCCAACAATGATCAACCTCCTTGAAGCCTCAAATCCAACAAAAAAGTCGCCAATATGTATCTATGTTGTCCATTTAGTTGAACTTACCGGTCGAACGTCAGCACTACTCATTGTCCATACCTCTAGAAAATCAGATCACCCGGCTCTTAACAGGACGGAAGCTCAATCTGATCACATTATCAATGCCTTTGAAAATTATGAACAACACGCGGAACATGTATCAGTCCAACCTTTGACAGCAATCTCCCCTTACTCTACAATGCATGAAGATATATGCAATTTAGCCGAAGAAAAGCGTGTCGCCTTTATAATCATCCCTTTTCATAAGCAACAAACAGTTGATGGCGGAATGGAATCAACAAACATGGCATTTCGAACTGTTAACCAAAATGTATTAGCGAATTCGCCTTGTTCGGTTGGAATTCTAGTAGATAGAGGCTTAAATAGTTCAAACCGTCTGATAGCTGATCAAATGTCTCATCATATAGCAGTTTTGTTTTTTGGAGGACCAGATGATAGAGAAGCATTAAGTTATGGTTGGAGAATGTCGGAACATTCTGGAATAAGTCTAACCGTGATGCGTTTTGTTCCTGGAGATGAAATAACGATGAACGAAAATATTAGTACCCGTGATAACAATGTAAATAGACAAAGAGTATTAGATGTTGAAACAGAAGAAGATAGTGAAAAGCAAATTGATGAGAAGTTTTTGCATTGGTTCACAATGAGCCATGTGAATGATGATTCAATTGCATATATTGAAAAGGTTGTAAACAATGGCGAGGAAACTGTCGCGGCGATAAGGTCTATGGGTGATGTATTTGGCCTTTTTATAGTTGGGAGAGGACAAGGAGTTATATCGCCGCTGACGGCAGGGCTAACAGATTGGAGTGAGTGTCCTGAATTAGGAGCTATTGGTGATTTGTTAGCATCATCTGATTTTGCAACAATTGCTTCAGTGTTGGTAGTTCAACAATATGTTGGAGCTGGTACTGAAGATGGATTGGGAACACCAGTGTTGACAAATGAAGATTATGTTAGTCATCATTCTGTTACACCGCCGAGGGGGCATCAATCTGTTTTTAATACAGAAAGAGAAGAAGAAGTTGTTGTAGCTGAGCCAGTTGTTGCTGCAGCTGGAATTCCAGGGGAGCCAATGGATATTATGACTGCAGTTCAGCTTGTGTTGAGAAAGTCACGCGCTTATGGTGGTCTTGCACGTGGTCTTCATGAAAGTGCTAAAGTGATTGAGAAGCATGCTGCACAGCTCTGTGTTCTTGCTGAGGATTGTGACCAACCTGATTACGTCAAGTTGGTGAAAGCCCTTTGTGCTGAACACAGTGTCAGTTTGTTGACTGTTCCAAATGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGCAAAATTGATTCAGAAGGAAAAGCTAGGAAGGTAACTGGTTGCTCCTGTGTGGTTGTCAAGGATTTCGGCGAGGAACATGAAGCATACAACGTTGTTCTTCAGCACGTGAAATCTAACTGA
Protein sequence

>MsG0480023467.01.T01

MNATADEMVCYSPTMITTNGIWQGDNPLDYALPLFILQVILVVIATRIFVFILKPIRQPRVIAEILGGIVLGPSVLGRNKTFADAVFPLRSVMVIETMANVGLLYFLFLVGVGMDASALRRIGRKSVTIAVAGMILPFGTGALFSIFLIKNTEKAYVGAFVLMLGVVLSVTAFPVLARILAELKLINTELGRVALSSALINDVLSWVLLAIAIAMAENEKVTLASIMVVLSSAAFVAFNVFVVRPIIMWIIRKTPEGETFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLIIPTGPLGFALIEKLEDFVSGLLLPLFFAISGLKTNVGLIDGAATWAILILLVILACVGKVVGTLIVALSYQMSVSDGAALGMLMNTKGLVEILVLNIGRDQKVLDEGAFATMVVITIMMTGLIVPGISIIYRPSRGMISYKRRTIQMSKKDAEFRVLVCIHTPRNVPTMINLLEASNPTKKSPICIYVVHLVELTGRTSALLIVHTSRKSDHPALNRTEAQSDHIINAFENYEQHAEHVSVQPLTAISPYSTMHEDICNLAEEKRVAFIIIPFHKQQTVDGGMESTNMAFRTVNQNVLANSPCSVGILVDRGLNSSNRLIADQMSHHIAVLFFGGPDDREALSYGWRMSEHSGISLTVMRFVPGDEITMNENISTRDNNVNRQRVLDVETEEDSEKQIDEKFLHWFTMSHVNDDSIAYIEKVVNNGEETVAAIRSMGDVFGLFIVGRGQGVISPLTAGLTDWSECPELGAIGDLLASSDFATIASVLVVQQYVGAGTEDGLGTPVLTNEDYVSHHSVTPPRGHQSVFNTEREEEVVVAEPVVAAAGIPGEPMDIMTAVQLVLRKSRAYGGLARGLHESAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHSVSLLTVPNAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSN*