AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028890.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028890.01.T01 MTR_5g076950 95.911 269 8 1 1 269 1 266 0.0 537
MsG0580028890.01.T01 MTR_3g064510 64.643 280 86 5 1 267 5 284 3.44e-129 368
MsG0580028890.01.T01 MTR_0040s0140 60.619 226 88 1 43 267 31 256 5.33e-99 290
MsG0580028890.01.T01 MTR_2g090255 57.328 232 98 1 37 267 21 252 2.62e-97 286
MsG0580028890.01.T01 MTR_5g079950 49.813 267 118 2 2 267 6 257 1.28e-90 269
MsG0580028890.01.T01 MTR_5g041700 56.696 224 96 1 44 267 25 247 4.06e-90 267
MsG0580028890.01.T01 MTR_3g435430 56.696 224 96 1 44 267 25 247 6.15e-90 267
MsG0580028890.01.T01 MTR_7g061720 50.988 253 119 2 16 267 8 256 1.96e-89 266
MsG0580028890.01.T01 MTR_2g097030 55.111 225 100 1 44 267 34 258 2.00e-88 263
MsG0580028890.01.T01 MTR_5g075320 54.386 228 103 1 40 267 25 251 2.77e-88 263
MsG0580028890.01.T01 MTR_4g081950 54.911 224 100 1 44 267 61 283 4.38e-88 263
MsG0580028890.01.T01 MTR_3g466790 55.357 224 99 1 44 267 32 254 7.66e-88 262
MsG0580028890.01.T01 MTR_3g094060 54.018 224 102 1 44 267 31 253 9.21e-88 261
MsG0580028890.01.T01 MTR_3g094040 54.018 224 102 1 44 267 31 253 2.93e-87 260
MsG0580028890.01.T01 MTR_3g466760 52.790 233 109 1 35 267 29 260 1.62e-86 259
MsG0580028890.01.T01 MTR_7g011060 52.863 227 98 2 43 269 25 242 2.55e-85 255
MsG0580028890.01.T01 MTR_4g063975 55.752 226 99 1 43 267 31 256 1.67e-82 248
MsG0580028890.01.T01 MTR_7g013140 53.125 224 102 2 43 265 27 248 2.19e-81 245
MsG0580028890.01.T01 MTR_7g013150 51.786 224 105 2 43 265 29 250 1.64e-79 241
MsG0580028890.01.T01 MTR_8g464350 50.661 227 109 2 38 263 25 249 5.82e-78 236
MsG0580028890.01.T01 MTR_8g058990 50.661 227 109 2 39 264 25 249 1.02e-77 236
MsG0580028890.01.T01 MTR_1g026020 49.554 224 111 1 44 265 29 252 2.85e-77 235
MsG0580028890.01.T01 MTR_1g085460 50.222 225 109 2 44 265 30 254 3.12e-76 232
MsG0580028890.01.T01 MTR_4g124340 43.066 274 144 5 3 266 12 283 3.94e-75 230
MsG0580028890.01.T01 MTR_7g013120 50.885 226 107 3 43 266 28 251 1.87e-74 228
MsG0580028890.01.T01 MTR_6g012520 53.097 226 97 2 44 269 28 244 1.99e-74 227
MsG0580028890.01.T01 MTR_7g110990 48.430 223 112 2 44 263 12 234 7.01e-73 223
MsG0580028890.01.T01 MTR_7g111010 48.430 223 112 2 44 263 27 249 7.89e-73 224
MsG0580028890.01.T01 MTR_5g011210 45.333 225 122 1 42 265 35 259 1.54e-66 208
MsG0580028890.01.T01 MTR_4g102450 45.701 221 119 1 44 263 36 256 5.74e-63 199
MsG0580028890.01.T01 MTR_0008s0120 36.283 226 87 5 39 264 27 195 2.28e-37 131
MsG0580028890.01.T01 MTR_6g012500 47.244 127 66 1 144 269 156 282 4.32e-36 130
MsG0580028890.01.T01 MTR_2g090270 28.390 236 144 7 42 265 33 255 4.42e-23 95.5
MsG0580028890.01.T01 MTR_4g028640 31.250 240 123 11 44 263 42 259 5.86e-23 95.1
MsG0580028890.01.T01 MTR_2g090265 29.362 235 141 8 43 265 32 253 5.08e-22 92.4
MsG0580028890.01.T01 MTR_0122s0020 30.213 235 139 8 43 265 40 261 8.83e-22 92.0
MsG0580028890.01.T01 MTR_0118s0070 29.565 230 133 11 49 262 53 269 7.46e-18 81.3
MsG0580028890.01.T01 MTR_0809s0010 28.326 233 148 10 40 263 43 265 8.69e-17 78.2
MsG0580028890.01.T01 MTR_4g075790 26.724 232 136 9 47 263 26 238 4.12e-13 67.8
MsG0580028890.01.T01 MTR_5g013440 27.706 231 148 10 47 268 32 252 7.24e-13 67.0
MsG0580028890.01.T01 MTR_1g085365 52.632 57 27 0 211 267 3 59 1.97e-12 61.2
MsG0580028890.01.T01 MTR_4g099370 27.119 236 149 9 37 263 24 245 1.05e-11 63.9
MsG0580028890.01.T01 MTR_0122s0020 29.775 178 101 7 43 209 40 204 5.27e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028890.01.T01 AT3G03220 84.071 226 36 0 43 268 39 264 4.47e-147 412
MsG0580028890.01.T01 AT5G56320 57.589 224 94 1 44 267 29 251 1.39e-92 274
MsG0580028890.01.T01 AT5G56320 57.589 224 94 1 44 267 29 251 1.39e-92 274
MsG0580028890.01.T01 AT5G56320 57.589 224 94 1 44 267 29 251 4.99e-92 274
MsG0580028890.01.T01 AT3G55500 51.119 268 115 2 1 267 6 258 7.47e-92 272
MsG0580028890.01.T01 AT5G05290 57.333 225 94 2 44 267 32 255 2.61e-90 268
MsG0580028890.01.T01 AT5G02260 54.667 225 101 1 44 267 32 256 5.20e-90 268
MsG0580028890.01.T01 AT2G37640 56.000 225 98 1 44 267 36 260 1.71e-89 266
MsG0580028890.01.T01 AT1G69530 50.562 267 114 3 1 267 1 249 2.88e-89 265
MsG0580028890.01.T01 AT1G69530 50.562 267 114 3 1 267 1 249 2.88e-89 265
MsG0580028890.01.T01 AT2G39700 55.556 225 99 1 44 267 31 255 8.77e-89 264
MsG0580028890.01.T01 AT3G29030 54.867 226 94 1 44 269 38 255 1.63e-88 263
MsG0580028890.01.T01 AT2G03090 56.250 224 97 1 44 267 30 252 3.70e-88 263
MsG0580028890.01.T01 AT1G69530 50.763 262 111 3 1 262 1 244 2.49e-87 261
MsG0580028890.01.T01 AT2G40610 52.444 225 105 2 44 267 30 253 1.44e-84 253
MsG0580028890.01.T01 AT1G26770 55.357 224 99 1 44 267 26 248 3.36e-84 252
MsG0580028890.01.T01 AT1G26770 55.357 224 99 1 44 267 36 258 4.76e-84 252
MsG0580028890.01.T01 AT2G37640 57.212 208 88 1 61 267 28 235 6.60e-84 251
MsG0580028890.01.T01 AT5G39270 51.261 238 113 2 28 265 42 276 7.34e-81 245
MsG0580028890.01.T01 AT2G28950 53.778 225 103 1 44 267 31 255 1.18e-80 244
MsG0580028890.01.T01 AT4G38210 51.754 228 107 2 43 267 27 254 2.55e-80 243
MsG0580028890.01.T01 AT5G39290 51.931 233 106 3 33 265 50 276 4.28e-80 243
MsG0580028890.01.T01 AT5G39280 52.232 224 104 2 42 265 52 272 4.91e-79 240
MsG0580028890.01.T01 AT5G39300 52.679 224 103 2 42 265 53 273 7.50e-79 239
MsG0580028890.01.T01 AT1G20190 49.091 220 110 1 46 263 28 247 1.47e-75 231
MsG0580028890.01.T01 AT1G69530 44.944 267 99 4 1 267 1 219 4.52e-72 221
MsG0580028890.01.T01 AT1G62980 48.444 225 115 1 42 265 29 253 5.95e-72 221
MsG0580028890.01.T01 AT4G01630 49.107 224 109 3 44 263 28 250 4.92e-71 219
MsG0580028890.01.T01 AT1G69530 45.038 262 96 4 1 262 1 214 2.46e-70 217
MsG0580028890.01.T01 AT5G39310 45.306 245 130 3 22 265 68 309 1.46e-68 214
MsG0580028890.01.T01 AT1G12560 46.154 221 117 2 44 263 37 256 1.87e-67 210
MsG0580028890.01.T01 AT5G39260 48.444 225 107 3 42 265 43 259 6.49e-66 206
MsG0580028890.01.T01 AT3G15370 47.414 232 107 6 44 267 27 251 2.38e-62 197
MsG0580028890.01.T01 AT1G20190 48.128 187 95 1 79 263 2 188 4.36e-62 194
MsG0580028890.01.T01 AT3G15370 47.907 215 97 6 61 267 74 281 1.10e-57 186
MsG0580028890.01.T01 AT4G28250 30.258 271 159 10 9 265 3 257 3.55e-24 98.6
MsG0580028890.01.T01 AT2G20750 30.859 256 151 9 25 265 20 264 9.52e-24 97.4
MsG0580028890.01.T01 AT4G28250 30.000 270 155 10 9 265 3 251 7.32e-22 92.0
MsG0580028890.01.T01 AT1G65680 28.099 242 146 9 37 263 40 268 1.67e-18 83.2
MsG0580028890.01.T01 AT2G20750 30.412 194 113 6 25 206 20 203 6.51e-15 72.4
MsG0580028890.01.T01 AT1G65681 27.397 219 129 8 60 263 14 217 1.07e-14 71.6
MsG0580028890.01.T01 AT4G17030 26.778 239 137 9 43 263 26 244 7.48e-13 67.0
MsG0580028890.01.T01 AT2G45110 25.431 232 147 8 46 263 35 254 1.51e-12 66.2
MsG0580028890.01.T01 AT4G28250 29.808 208 116 8 9 206 3 190 3.36e-11 61.6
MsG0580028890.01.T01 AT4G28250 29.808 208 116 8 9 206 3 190 3.55e-11 61.6

Find 101 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTCTGTGCGCCGAATTA+TGG 0.110153 5:-88116546 MsG0580028890.01.T01:CDS
GGCTTCCAATGGGTCGGAAT+TGG 0.251230 5:-88114218 MsG0580028890.01.T01:CDS
GCTTCCAATGGGTCGGAATT+GGG 0.261409 5:-88114217 MsG0580028890.01.T01:CDS
CGATTTACTGTCACTGGTTC+TGG 0.264534 5:-88114324 MsG0580028890.01.T01:CDS
GGAAGAACAAAGTGCTTATT+AGG 0.266775 5:+88116489 None:intergenic
TTGTCCAAAACTCCAATCTT+TGG 0.277052 5:+88114095 None:intergenic
GCTCCCAAAGATTGGAGTTT+TGG 0.282302 5:-88114099 MsG0580028890.01.T01:CDS
ACTTCTGTGCGCCGAATTAT+GGG 0.312803 5:-88116545 MsG0580028890.01.T01:CDS
GGTAAGTAGACCTATAATAT+TGG 0.317028 5:+88113969 None:intergenic
GTAAGTAGACCTATAATATT+GGG 0.325816 5:+88113970 None:intergenic
ACGCGTTTATATGCCAGTTT+TGG 0.342695 5:+88114193 None:intergenic
GATTTAAAGTGGTGTATTCC+TGG 0.357927 5:-88116594 MsG0580028890.01.T01:CDS
CATCGTTGCGGTGAAGGTTA+AGG 0.369985 5:-88114256 MsG0580028890.01.T01:CDS
TGTCCAAAACTCCAATCTTT+GGG 0.371986 5:+88114096 None:intergenic
GTCGGAATTGGGGCCAAAAC+TGG 0.376301 5:-88114206 MsG0580028890.01.T01:CDS
TGCGCCGAATTATGGGTTTA+CGG 0.384118 5:-88116538 MsG0580028890.01.T01:CDS
GTCGGCGGCGCGTGTGGTTA+CGG 0.395529 5:-88116723 MsG0580028890.01.T01:CDS
AGAGTAGATAGTAATTGATT+TGG 0.397863 5:-88113897 MsG0580028890.01.T01:three_prime_UTR
GAATCAACCTCTTTCATTTG+AGG 0.401927 5:-88114163 MsG0580028890.01.T01:CDS
AACAGTTGCCATGCCGTAAC+CGG 0.402191 5:+88116686 None:intergenic
GTGGCGCGTGCTTTGAATTA+CGG 0.402202 5:-88116626 MsG0580028890.01.T01:CDS
TAAGTTCCTAAGAAAATAGA+TGG 0.407169 5:+88113838 None:intergenic
AATTATGGGTTTACGGTTGA+AGG 0.412698 5:-88116531 MsG0580028890.01.T01:CDS
TGTATGAAAATATACCTTGT+TGG 0.414246 5:-88113814 MsG0580028890.01.T01:three_prime_UTR
ACAATGTTGCTCCCAAAGAT+TGG 0.419779 5:-88114107 MsG0580028890.01.T01:CDS
AATATTATAGGTCTACTTAC+CGG 0.423978 5:-88113967 MsG0580028890.01.T01:three_prime_UTR
AACGAAGAAAACTTGTTTCA+AGG 0.424992 5:-88114035 MsG0580028890.01.T01:three_prime_UTR
GACTTATCAAAAGCCGGTTA+CGG 0.433896 5:-88116699 MsG0580028890.01.T01:CDS
GTAGATAGTAATTGATTTGG+TGG 0.442606 5:-88113894 MsG0580028890.01.T01:three_prime_UTR
ACTGTGTCACGTGGATCTAC+CGG 0.453305 5:+88116744 None:intergenic
GTGCTGATCAGCAATGTTGC+TGG 0.456538 5:-88114288 MsG0580028890.01.T01:CDS
ATCAAATTGCTTCCCTTCAA+AGG 0.456675 5:+88114071 None:intergenic
ATCGTTGCGGTGAAGGTTAA+GGG 0.457051 5:-88114255 MsG0580028890.01.T01:CDS
CAGAACCAGTGACAGTAAAT+CGG 0.461590 5:+88114325 None:intergenic
GTAACAATAATCGAAGTTCC+AGG 0.466240 5:+88116576 None:intergenic
AAGATCGCTATTTGGAAAGC+TGG 0.469148 5:-88116450 MsG0580028890.01.T01:CDS
GGGTTTACGGTTGAAGGTGG+TGG 0.469331 5:-88116525 MsG0580028890.01.T01:CDS
GGCGCGTGCGGATCGCCATT+CGG 0.471270 5:+88116779 None:intergenic
ATCAGCAATGTTGCTGGCCA+TGG 0.474378 5:-88114282 MsG0580028890.01.T01:CDS
AAGGTTAAGGGCTCAAGAAC+GGG 0.477294 5:-88114243 MsG0580028890.01.T01:CDS
CTTCCAATGGGTCGGAATTG+GGG 0.477971 5:-88114216 MsG0580028890.01.T01:CDS
AAAATGTAAAAGAACACAAC+CGG 0.481916 5:+88113948 None:intergenic
ACGAAGAAAACTTGTTTCAA+GGG 0.482015 5:-88114034 MsG0580028890.01.T01:three_prime_UTR
CTTCCCCTTCTTTCACCGAA+TGG 0.483052 5:-88116794 MsG0580028890.01.T01:CDS
ATCTTCTCAAAAGCATCAAT+AGG 0.486912 5:+88116468 None:intergenic
GGAGTCCGATTTACTGTCAC+TGG 0.495454 5:-88114330 MsG0580028890.01.T01:CDS
TTTGAGGTTACGAGTAGTGA+TGG 0.501425 5:-88114147 MsG0580028890.01.T01:CDS
CTCGTAACCTCAAATGAAAG+AGG 0.502745 5:+88114156 None:intergenic
GATCGCCATTCGGTGAAAGA+AGG 0.504459 5:+88116789 None:intergenic
TCAACCGTAAACCCATAATT+CGG 0.504889 5:+88116534 None:intergenic
AGAAGAGTAGTGAGATGTAA+CGG 0.505253 5:+88116848 None:intergenic
GGGGAAGATTGTTGAGAAGG+TGG 0.507413 5:+88116810 None:intergenic
GAAGGGGAAGATTGTTGAGA+AGG 0.515350 5:+88116807 None:intergenic
CTGTGTCACGTGGATCTACC+GGG 0.516254 5:+88116745 None:intergenic
CTCTTTGTTGTTGACCAACA+AGG 0.520384 5:+88113800 None:intergenic
AAAGTAGAAGTGAAAGTGAT+GGG 0.528669 5:+88117007 None:intergenic
AGGATAAAGTGCAGAAGGGA+AGG 0.530862 5:-88114354 MsG0580028890.01.T01:CDS
TATGGGTTTACGGTTGAAGG+TGG 0.532788 5:-88116528 MsG0580028890.01.T01:CDS
TACGGAGACTTATCAAAAGC+CGG 0.537873 5:-88116705 MsG0580028890.01.T01:CDS
ATCGCCATTCGGTGAAAGAA+GGG 0.538930 5:+88116790 None:intergenic
TGGAGACATCGTTGCGGTGA+AGG 0.541140 5:-88114262 MsG0580028890.01.T01:CDS
GAAAGTAGAAGTGAAAGTGA+TGG 0.541884 5:+88117006 None:intergenic
AAGAACGGGTTGGCTTCCAA+TGG 0.542982 5:-88114229 MsG0580028890.01.T01:CDS
AGAACGGGTTGGCTTCCAAT+GGG 0.547699 5:-88114228 MsG0580028890.01.T01:CDS
TGGCCCCAATTCCGACCCAT+TGG 0.555109 5:+88114213 None:intergenic
GGCGTAGTACGTGGCGCGTG+CGG 0.557345 5:+88116767 None:intergenic
GACACAGTCGGCGGCGCGTG+TGG 0.559171 5:-88116729 MsG0580028890.01.T01:CDS
AGAAGGTGGTGGTTGAGACG+AGG 0.570188 5:+88116824 None:intergenic
GGAGCAGGATAAAGTGCAGA+AGG 0.570200 5:-88114359 MsG0580028890.01.T01:intron
GAAGGTTAAGGGCTCAAGAA+CGG 0.572064 5:-88114244 MsG0580028890.01.T01:CDS
ATAAAGTGCAGAAGGGAAGG+TGG 0.575254 5:-88114351 MsG0580028890.01.T01:CDS
AATGGGAAAGGGAAAGAGAC+TGG 0.581588 5:+88114009 None:intergenic
AGAACAAAGTGCTTATTAGG+AGG 0.582144 5:+88116492 None:intergenic
CGGGTTGGCTTCCAATGGGT+CGG 0.583185 5:-88114224 MsG0580028890.01.T01:CDS
TTGAGGTTACGAGTAGTGAT+GGG 0.583484 5:-88114146 MsG0580028890.01.T01:CDS
TTTGAACGAGGTCAGATCTG+TGG 0.583854 5:-88116645 MsG0580028890.01.T01:CDS
TTGTAAGATTGTCAATGTGA+TGG 0.589667 5:-88113870 MsG0580028890.01.T01:three_prime_UTR
ATCAAAAGCCGGTTACGGCA+TGG 0.595697 5:-88116694 MsG0580028890.01.T01:CDS
TCACCGCAACGATGTCTCCA+TGG 0.596378 5:+88114265 None:intergenic
ACATGCCTCTTCAGTATCGT+AGG 0.598128 5:-88116425 MsG0580028890.01.T01:intron
TTAAGGGCTCAAGAACGGGT+TGG 0.598129 5:-88114239 MsG0580028890.01.T01:CDS
GTAACATTTCCTCAGTGTGA+AGG 0.604886 5:+88116919 None:intergenic
GGTTACGGCATGGCAACTGT+TGG 0.609475 5:-88116684 MsG0580028890.01.T01:CDS
GAAGATTGTTGAGAAGGTGG+TGG 0.611367 5:+88116813 None:intergenic
ATCTACCGGGGCGTAGTACG+TGG 0.611667 5:+88116758 None:intergenic
TATTACCTACGATACTGAAG+AGG 0.624697 5:+88116420 None:intergenic
GCGCCGCCGACTGTGTCACG+TGG 0.625743 5:+88116735 None:intergenic
GGTGTGTGGATGATTTAAAG+TGG 0.628924 5:-88116605 MsG0580028890.01.T01:CDS
CTTGTTGGTCAACAACAAAG+AGG 0.636527 5:-88113799 MsG0580028890.01.T01:three_prime_UTR
TAAGTAGACCTATAATATTG+GGG 0.637258 5:+88113971 None:intergenic
TCGCCATTCGGTGAAAGAAG+GGG 0.643549 5:+88116791 None:intergenic
GAGCAGGATAAAGTGCAGAA+GGG 0.649937 5:-88114358 MsG0580028890.01.T01:intron
GTGCTTTGAATTACGGTGTG+TGG 0.652130 5:-88116619 MsG0580028890.01.T01:CDS
AGTGAAGCTTTGTTTGAACG+AGG 0.664292 5:-88116657 MsG0580028890.01.T01:CDS
TAGTGATGGGAAAACAGTCA+CGG 0.670779 5:-88114133 MsG0580028890.01.T01:CDS
GTAGATCCACGTGACACAGT+CGG 0.684257 5:-88116741 MsG0580028890.01.T01:CDS
ACGCGCCACGTACTACGCCC+CGG 0.693538 5:-88116763 MsG0580028890.01.T01:CDS
AAGTAGACCTATAATATTGG+GGG 0.718688 5:+88113972 None:intergenic
TGTGTCACGTGGATCTACCG+GGG 0.729868 5:+88116746 None:intergenic
GATCCACGTGACACAGTCGG+CGG 0.742025 5:-88116738 MsG0580028890.01.T01:CDS
TGGCCATGGAGACATCGTTG+CGG 0.743278 5:-88114268 MsG0580028890.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAGTCAAATTTAATGTT+TGG - Chr5:88114834-88114853 MsG0580028890.01.T01:intron 15.0%
!! TATAGAATTTAATAGTATAC+TGG - Chr5:88114876-88114895 MsG0580028890.01.T01:intron 15.0%
!! TATTCTACATGATTTAATAT+TGG - Chr5:88116369-88116388 MsG0580028890.01.T01:intron 15.0%
!!! ATATTTTTTTTAGAGAATGA+TGG - Chr5:88115556-88115575 MsG0580028890.01.T01:intron 15.0%
!!! CTTTTACATTTTAATTCTTT+TGG - Chr5:88116890-88116909 MsG0580028890.01.T01:CDS 15.0%
!!! TCATTTTCTCAAATTATTAT+GGG + Chr5:88114630-88114649 None:intergenic 15.0%
!! ATTACTAAAACTAGTATTCA+AGG + Chr5:88115169-88115188 None:intergenic 20.0%
!!! AATTGGTTAAATTTTTCCTA+TGG - Chr5:88114916-88114935 MsG0580028890.01.T01:intron 20.0%
!!! GAATACTAGTTTTAGTAATA+AGG - Chr5:88115170-88115189 MsG0580028890.01.T01:intron 20.0%
!!! GTCATTTTCTCAAATTATTA+TGG + Chr5:88114631-88114650 None:intergenic 20.0%
! AAAAAAATTGGAAATGGGAA+AGG + Chr5:88116833-88116852 None:intergenic 25.0%
! AAAAAATTGGAAATGGGAAA+GGG + Chr5:88116832-88116851 None:intergenic 25.0%
! AAAATGTAAAAGAACACAAC+CGG + Chr5:88116882-88116901 None:intergenic 25.0%
! AATACAAAATCCCCTTAATT+TGG + Chr5:88115686-88115705 None:intergenic 25.0%
! AATATTATAGGTCTACTTAC+CGG - Chr5:88116860-88116879 MsG0580028890.01.T01:CDS 25.0%
! AATGAAATTCAAGTAGCAAA+TGG - Chr5:88115420-88115439 MsG0580028890.01.T01:intron 25.0%
! AATTCCTTTAGATAATGAGA+AGG - Chr5:88115998-88116017 MsG0580028890.01.T01:intron 25.0%
! AGAGTAGATAGTAATTGATT+TGG - Chr5:88116930-88116949 MsG0580028890.01.T01:five_prime_UTR 25.0%
! ATACAAAATCCCCTTAATTT+GGG + Chr5:88115685-88115704 None:intergenic 25.0%
! ATATTGGGGGTAAAAAAAAT+TGG + Chr5:88116845-88116864 None:intergenic 25.0%
! ATTCCTTTAGATAATGAGAA+GGG - Chr5:88115999-88116018 MsG0580028890.01.T01:intron 25.0%
! ATTCTTAAAGACGAAGTTAT+AGG - Chr5:88115012-88115031 MsG0580028890.01.T01:intron 25.0%
! GATAACATTGTATGAAGATA+AGG + Chr5:88115960-88115979 None:intergenic 25.0%
! GGGTAAAAAAAATTGGAAAT+GGG + Chr5:88116838-88116857 None:intergenic 25.0%
! GTAAGTAGACCTATAATATT+GGG + Chr5:88116860-88116879 None:intergenic 25.0%
! TAAGTAGACCTATAATATTG+GGG + Chr5:88116859-88116878 None:intergenic 25.0%
! TAAGTTCCTAAGAAAATAGA+TGG + Chr5:88116992-88117011 None:intergenic 25.0%
! TGTATGAAAATATACCTTGT+TGG - Chr5:88117013-88117032 MsG0580028890.01.T01:five_prime_UTR 25.0%
! TTTAATAGTATACTGGAGTT+TGG - Chr5:88114883-88114902 MsG0580028890.01.T01:intron 25.0%
!! TCAATTTTCCGTTAATTTTG+CGG + Chr5:88116249-88116268 None:intergenic 25.0%
!! TTTGAATTTTGTGTTCTGTT+TGG - Chr5:88116447-88116466 MsG0580028890.01.T01:CDS 25.0%
!! TTTTCATGAAGATATTCCAT+AGG + Chr5:88114935-88114954 None:intergenic 25.0%
!!! TTTTTTACCCCCAATATTAT+AGG - Chr5:88116848-88116867 MsG0580028890.01.T01:CDS 25.0%
AAAGTAGAAGTGAAAGTGAT+GGG + Chr5:88113823-88113842 None:intergenic 30.0%
AACAAAGCCTAAAGGAAAAT+AGG - Chr5:88115791-88115810 MsG0580028890.01.T01:intron 30.0%
AAGCCAAGTATAGCTAATAA+AGG - Chr5:88116302-88116321 MsG0580028890.01.T01:intron 30.0%
AAGTAGACCTATAATATTGG+GGG + Chr5:88116858-88116877 None:intergenic 30.0%
ACAACTTCAATCATAAGTGT+CGG - Chr5:88114735-88114754 MsG0580028890.01.T01:intron 30.0%
CTTCATGCATAATACTCATT+CGG - Chr5:88115271-88115290 MsG0580028890.01.T01:intron 30.0%
GAAGAAGAAGAAAAAAGTGA+GGG + Chr5:88113883-88113902 None:intergenic 30.0%
GAATTTCATTAGCACTAGAA+AGG + Chr5:88115410-88115429 None:intergenic 30.0%
GGGGTAAAAAAAATTGGAAA+TGG + Chr5:88116839-88116858 None:intergenic 30.0%
GGTAAGTAGACCTATAATAT+TGG + Chr5:88116861-88116880 None:intergenic 30.0%
TCTATGTATCGAAGAATGTT+GGG + Chr5:88115922-88115941 None:intergenic 30.0%
TGAAGAAGAAGAAAAAAGTG+AGG + Chr5:88113884-88113903 None:intergenic 30.0%
TTATTCATCTTCTAACCACA+AGG + Chr5:88116329-88116348 None:intergenic 30.0%
TTGATTGTGACAAAACTTAG+AGG - Chr5:88114774-88114793 MsG0580028890.01.T01:intron 30.0%
TTGTAAGATTGTCAATGTGA+TGG - Chr5:88116957-88116976 MsG0580028890.01.T01:five_prime_UTR 30.0%
! AACGAAGAAAACTTGTTTCA+AGG - Chr5:88116792-88116811 MsG0580028890.01.T01:CDS 30.0%
! ACGAAGAAAACTTGTTTCAA+GGG - Chr5:88116793-88116812 MsG0580028890.01.T01:CDS 30.0%
! AGCTTTCCATCTATTTTCTT+AGG - Chr5:88116983-88117002 MsG0580028890.01.T01:five_prime_UTR 30.0%
! CTACTATCCTATTTTCCTTT+AGG + Chr5:88115801-88115820 None:intergenic 30.0%
! TACAAAATCCCCTTAATTTG+GGG + Chr5:88115684-88115703 None:intergenic 30.0%
! TGAAACAAGTTTTCTTCGTT+TGG + Chr5:88116792-88116811 None:intergenic 30.0%
!! AGTTTGGCTTGTTTATGAAT+TGG - Chr5:88114899-88114918 MsG0580028890.01.T01:intron 30.0%
!! ATCTTCTCAAAAGCATCAAT+AGG + Chr5:88114362-88114381 None:intergenic 30.0%
!! GTAGATAGTAATTGATTTGG+TGG - Chr5:88116933-88116952 MsG0580028890.01.T01:five_prime_UTR 30.0%
AATTATGGGTTTACGGTTGA+AGG - Chr5:88114296-88114315 MsG0580028890.01.T01:CDS 35.0%
ACCATTGTCTAGCAAAATCT+CGG - Chr5:88115221-88115240 MsG0580028890.01.T01:intron 35.0%
AGAAGAGTAGTGAGATGTAA+CGG + Chr5:88113982-88114001 None:intergenic 35.0%
ATAGCTAATAAAGGACCTTG+TGG - Chr5:88116311-88116330 MsG0580028890.01.T01:intron 35.0%
ATCAAATTGCTTCCCTTCAA+AGG + Chr5:88116759-88116778 None:intergenic 35.0%
CAAGTAGCAAATGGATGATA+GGG - Chr5:88115429-88115448 MsG0580028890.01.T01:intron 35.0%
CTAGCAAGTATATTAGAGCT+GGG - Chr5:88116162-88116181 MsG0580028890.01.T01:intron 35.0%
CTCTATGTATCGAAGAATGT+TGG + Chr5:88115923-88115942 None:intergenic 35.0%
GAAAGTAGAAGTGAAAGTGA+TGG + Chr5:88113824-88113843 None:intergenic 35.0%
GAATCAACCTCTTTCATTTG+AGG - Chr5:88116664-88116683 MsG0580028890.01.T01:CDS 35.0%
GAGTAAGTGGAAGAAATAGT+GGG + Chr5:88115734-88115753 None:intergenic 35.0%
GCATAAAGTTCCAAAGAGAA+AGG + Chr5:88115340-88115359 None:intergenic 35.0%
GGAAAAGACCGCAAAATTAA+CGG - Chr5:88116238-88116257 MsG0580028890.01.T01:intron 35.0%
GGTCCTTTATTAGCTATACT+TGG + Chr5:88116308-88116327 None:intergenic 35.0%
GTAACAATAATCGAAGTTCC+AGG + Chr5:88114254-88114273 None:intergenic 35.0%
GTAGAATAGTGACAGCTTAT+GGG + Chr5:88116357-88116376 None:intergenic 35.0%
GTTCCCTTCTCATTATCTAA+AGG + Chr5:88116005-88116024 None:intergenic 35.0%
TAATGATTGTTGATCGTTGC+CGG - Chr5:88114572-88114591 MsG0580028890.01.T01:intron 35.0%
TAGAATAGTGACAGCTTATG+GGG + Chr5:88116356-88116375 None:intergenic 35.0%
TATTACCTACGATACTGAAG+AGG + Chr5:88114410-88114429 None:intergenic 35.0%
TCAACCGTAAACCCATAATT+CGG + Chr5:88114296-88114315 None:intergenic 35.0%
TCAAGTAGCAAATGGATGAT+AGG - Chr5:88115428-88115447 MsG0580028890.01.T01:intron 35.0%
TCTAGCAAAATCTCGGTAAT+TGG - Chr5:88115228-88115247 MsG0580028890.01.T01:intron 35.0%
TGTAGAATAGTGACAGCTTA+TGG + Chr5:88116358-88116377 None:intergenic 35.0%
TGTCCAAAACTCCAATCTTT+GGG + Chr5:88116734-88116753 None:intergenic 35.0%
TTGTCCAAAACTCCAATCTT+TGG + Chr5:88116735-88116754 None:intergenic 35.0%
! ACAAAATCCCCTTAATTTGG+GGG + Chr5:88115683-88115702 None:intergenic 35.0%
! AGAACAAAGTGCTTATTAGG+AGG + Chr5:88114338-88114357 None:intergenic 35.0%
! ATTTTGCTAGACAATGGTAG+AGG + Chr5:88115219-88115238 None:intergenic 35.0%
! GATTTAAAGTGGTGTATTCC+TGG - Chr5:88114233-88114252 MsG0580028890.01.T01:CDS 35.0%
! GGAAGAACAAAGTGCTTATT+AGG + Chr5:88114341-88114360 None:intergenic 35.0%
! GTTAATTTTGCGGTCTTTTC+CGG + Chr5:88116239-88116258 None:intergenic 35.0%
!! CTTTTGAGAAGATCGCTATT+TGG - Chr5:88114369-88114388 MsG0580028890.01.T01:intron 35.0%
!! GTTTTGGACAAACCTTTGAA+GGG - Chr5:88116744-88116763 MsG0580028890.01.T01:CDS 35.0%
!!! AGTTTTGGACAAACCTTTGA+AGG - Chr5:88116743-88116762 MsG0580028890.01.T01:CDS 35.0%
AAGATCGCTATTTGGAAAGC+TGG - Chr5:88114377-88114396 MsG0580028890.01.T01:intron 40.0%
ACAATGTTGCTCCCAAAGAT+TGG - Chr5:88116720-88116739 MsG0580028890.01.T01:CDS 40.0%
AGACCGTGTACTAAATAGAC+TGG - Chr5:88116212-88116231 MsG0580028890.01.T01:intron 40.0%
AGTATGCACACCTTTCTCTT+TGG - Chr5:88115327-88115346 MsG0580028890.01.T01:intron 40.0%
ATTTGAGTCCCCCCAAATTA+AGG - Chr5:88115671-88115690 MsG0580028890.01.T01:intron 40.0%
CAGAACCAGTGACAGTAAAT+CGG + Chr5:88116505-88116524 None:intergenic 40.0%
CCAGTTTGGCATACTCATAA+TGG + Chr5:88115869-88115888 None:intergenic 40.0%
CCATTATGAGTATGCCAAAC+TGG - Chr5:88115866-88115885 MsG0580028890.01.T01:intron 40.0%
CTATTTAGTACACGGTCTGA+AGG + Chr5:88116210-88116229 None:intergenic 40.0%
CTCGTAACCTCAAATGAAAG+AGG + Chr5:88116674-88116693 None:intergenic 40.0%
CTTGTTGGTCAACAACAAAG+AGG - Chr5:88117028-88117047 MsG0580028890.01.T01:five_prime_UTR 40.0%
GACTTATCAAAAGCCGGTTA+CGG - Chr5:88114128-88114147 MsG0580028890.01.T01:CDS 40.0%
GAGTGAGAGACAAAGTCTAT+AGG - Chr5:88115034-88115053 MsG0580028890.01.T01:intron 40.0%
GCTAGCAAGTATATTAGAGC+TGG - Chr5:88116161-88116180 MsG0580028890.01.T01:intron 40.0%
GGAGTAAGTGGAAGAAATAG+TGG + Chr5:88115735-88115754 None:intergenic 40.0%
GGGACTCAAATTGTATTGGA+GGG + Chr5:88115662-88115681 None:intergenic 40.0%
GGTCCAGTCTATTTAGTACA+CGG + Chr5:88116218-88116237 None:intergenic 40.0%
GGTGTGTGGATGATTTAAAG+TGG - Chr5:88114222-88114241 MsG0580028890.01.T01:CDS 40.0%
GTAACATTTCCTCAGTGTGA+AGG + Chr5:88113911-88113930 None:intergenic 40.0%
GTGTACTAAATAGACTGGAC+CGG - Chr5:88116217-88116236 MsG0580028890.01.T01:intron 40.0%
TACGGAGACTTATCAAAAGC+CGG - Chr5:88114122-88114141 MsG0580028890.01.T01:CDS 40.0%
TAGACAATGGTAGAGGATCA+TGG + Chr5:88115212-88115231 None:intergenic 40.0%
TTATTATGGGTCTTGACGTG+TGG + Chr5:88114617-88114636 None:intergenic 40.0%
TTGAGGTTACGAGTAGTGAT+GGG - Chr5:88116681-88116700 MsG0580028890.01.T01:CDS 40.0%
TTTGAGGGGTGGGAAATATA+GGG - Chr5:88115497-88115516 MsG0580028890.01.T01:intron 40.0%
TTTGAGTCCCCCCAAATTAA+GGG - Chr5:88115672-88115691 MsG0580028890.01.T01:intron 40.0%
! AAGAGAAAGGTGTGCATACT+CGG + Chr5:88115327-88115346 None:intergenic 40.0%
! ACCGAGATTTTGCTAGACAA+TGG + Chr5:88115225-88115244 None:intergenic 40.0%
! ACGCGTTTATATGCCAGTTT+TGG + Chr5:88116637-88116656 None:intergenic 40.0%
! CAAAATCCCCTTAATTTGGG+GGG + Chr5:88115682-88115701 None:intergenic 40.0%
! CTTCATTTTCCTTCACACTG+AGG - Chr5:88113899-88113918 MsG0580028890.01.T01:three_prime_UTR 40.0%
! GCTCTAAACGAAAGAGTAGT+TGG + Chr5:88114441-88114460 None:intergenic 40.0%
! TAGTGATGGGAAAACAGTCA+CGG - Chr5:88116694-88116713 MsG0580028890.01.T01:CDS 40.0%
! TTTGAGGTTACGAGTAGTGA+TGG - Chr5:88116680-88116699 MsG0580028890.01.T01:CDS 40.0%
!! AGTGAAGCTTTGTTTGAACG+AGG - Chr5:88114170-88114189 MsG0580028890.01.T01:CDS 40.0%
!! CTCTTTGTTGTTGACCAACA+AGG + Chr5:88117030-88117049 None:intergenic 40.0%
!! TGGAAGAAATAGTGGGCTTT+GGG + Chr5:88115727-88115746 None:intergenic 40.0%
!! TTTTGTGTTCTGTTTGGAGC+AGG - Chr5:88116453-88116472 MsG0580028890.01.T01:CDS 40.0%
AACTTCTGTGCGCCGAATTA+TGG - Chr5:88114281-88114300 MsG0580028890.01.T01:CDS 45.0%
AAGGTTAAGGGCTCAAGAAC+GGG - Chr5:88116584-88116603 MsG0580028890.01.T01:CDS 45.0%
AATGGGAAAGGGAAAGAGAC+TGG + Chr5:88116821-88116840 None:intergenic 45.0%
ACACTCTGACACATGTTGGA+TGG - Chr5:88114695-88114714 MsG0580028890.01.T01:intron 45.0%
ACATGCCTCTTCAGTATCGT+AGG - Chr5:88114402-88114421 MsG0580028890.01.T01:intron 45.0%
ACTTCTGTGCGCCGAATTAT+GGG - Chr5:88114282-88114301 MsG0580028890.01.T01:CDS 45.0%
AGGATAAAGTGCAGAAGGGA+AGG - Chr5:88116473-88116492 MsG0580028890.01.T01:CDS 45.0%
AGTTTCAGTAGTACGAGCAC+AGG + Chr5:88116272-88116291 None:intergenic 45.0%
ATAAAGTGCAGAAGGGAAGG+TGG - Chr5:88116476-88116495 MsG0580028890.01.T01:CDS 45.0%
ATCGTTGCGGTGAAGGTTAA+GGG - Chr5:88116572-88116591 MsG0580028890.01.T01:CDS 45.0%
CACAACACTCTGACACATGT+TGG - Chr5:88114691-88114710 MsG0580028890.01.T01:intron 45.0%
GAAGATTGTTGAGAAGGTGG+TGG + Chr5:88114017-88114036 None:intergenic 45.0%
GAAGGGGAAGATTGTTGAGA+AGG + Chr5:88114023-88114042 None:intergenic 45.0%
GAAGGTTAAGGGCTCAAGAA+CGG - Chr5:88116583-88116602 MsG0580028890.01.T01:CDS 45.0%
GAGCAGGATAAAGTGCAGAA+GGG - Chr5:88116469-88116488 MsG0580028890.01.T01:CDS 45.0%
GAGGACTTTGGCAAAAAGGA+CGG + Chr5:88115756-88115775 None:intergenic 45.0%
GCAAATGGATGATAGGGACT+AGG - Chr5:88115435-88115454 MsG0580028890.01.T01:intron 45.0%
GCTCGTACTACTGAAACTGT+CGG - Chr5:88116274-88116293 MsG0580028890.01.T01:intron 45.0%
GGGGACTCAAATTGTATTGG+AGG + Chr5:88115663-88115682 None:intergenic 45.0%
GTCTCGCAAACAAAGCCTAA+AGG - Chr5:88115783-88115802 MsG0580028890.01.T01:intron 45.0%
GTGGGAAATATAGGGGGAAA+TGG - Chr5:88115505-88115524 MsG0580028890.01.T01:intron 45.0%
TATGGGTTTACGGTTGAAGG+TGG - Chr5:88114299-88114318 MsG0580028890.01.T01:CDS 45.0%
TGATCGTTGCCGGTGTTTAA+CGG - Chr5:88114582-88114601 MsG0580028890.01.T01:intron 45.0%
TGCGCCGAATTATGGGTTTA+CGG - Chr5:88114289-88114308 MsG0580028890.01.T01:CDS 45.0%
TGGGGGGACTCAAATTGTAT+TGG + Chr5:88115666-88115685 None:intergenic 45.0%
TGTTAGGGTCCGTTAAACAC+CGG + Chr5:88114594-88114613 None:intergenic 45.0%
TTGAGGGGTGGGAAATATAG+GGG - Chr5:88115498-88115517 MsG0580028890.01.T01:intron 45.0%
TTGAGTCCCCCCAAATTAAG+GGG - Chr5:88115673-88115692 MsG0580028890.01.T01:intron 45.0%
TTTGAACGAGGTCAGATCTG+TGG - Chr5:88114182-88114201 MsG0580028890.01.T01:CDS 45.0%
! ATCGCCATTCGGTGAAAGAA+GGG + Chr5:88114040-88114059 None:intergenic 45.0%
! CTTTGAGGGGTGGGAAATAT+AGG - Chr5:88115496-88115515 MsG0580028890.01.T01:intron 45.0%
! GCTCCCAAAGATTGGAGTTT+TGG - Chr5:88116728-88116747 MsG0580028890.01.T01:CDS 45.0%
! GTGCTTTGAATTACGGTGTG+TGG - Chr5:88114208-88114227 MsG0580028890.01.T01:CDS 45.0%
!! AAGAAATAGTGGGCTTTGGG+GGG + Chr5:88115724-88115743 None:intergenic 45.0%
!! CGATTTACTGTCACTGGTTC+TGG - Chr5:88116503-88116522 MsG0580028890.01.T01:CDS 45.0%
!! CTAGGCTTTGTTTGCGAGTT+CGG - Chr5:88115453-88115472 MsG0580028890.01.T01:intron 45.0%
!! GAAGAAATAGTGGGCTTTGG+GGG + Chr5:88115725-88115744 None:intergenic 45.0%
!! GGAAGAAATAGTGGGCTTTG+GGG + Chr5:88115726-88115745 None:intergenic 45.0%
!! GTGGAAGAAATAGTGGGCTT+TGG + Chr5:88115728-88115747 None:intergenic 45.0%
!! TTAGGCTTTGTTTGCGAGAC+TGG + Chr5:88115783-88115802 None:intergenic 45.0%
AACAGTTGCCATGCCGTAAC+CGG + Chr5:88114144-88114163 None:intergenic 50.0%
ACTGTGTCACGTGGATCTAC+CGG + Chr5:88114086-88114105 None:intergenic 50.0%
AGGGGAGGACTTTGGCAAAA+AGG + Chr5:88115760-88115779 None:intergenic 50.0%
ATCAAAAGCCGGTTACGGCA+TGG - Chr5:88114133-88114152 MsG0580028890.01.T01:CDS 50.0%
ATCAGCAATGTTGCTGGCCA+TGG - Chr5:88116545-88116564 MsG0580028890.01.T01:CDS 50.0%
ATGTTGGATGGACACCTGAC+AGG - Chr5:88114707-88114726 MsG0580028890.01.T01:intron 50.0%
CATCGTTGCGGTGAAGGTTA+AGG - Chr5:88116571-88116590 MsG0580028890.01.T01:CDS 50.0%
CTTCCAATGGGTCGGAATTG+GGG - Chr5:88116611-88116630 MsG0580028890.01.T01:CDS 50.0%
CTTCCCCTTCTTTCACCGAA+TGG - Chr5:88114033-88114052 MsG0580028890.01.T01:three_prime_UTR 50.0%
GCTTCCAATGGGTCGGAATT+GGG - Chr5:88116610-88116629 MsG0580028890.01.T01:CDS 50.0%
GGAGCAGGATAAAGTGCAGA+AGG - Chr5:88116468-88116487 MsG0580028890.01.T01:CDS 50.0%
GGAGTCCGATTTACTGTCAC+TGG - Chr5:88116497-88116516 MsG0580028890.01.T01:CDS 50.0%
GGCAAAAAGGACGGAGTAAG+TGG + Chr5:88115747-88115766 None:intergenic 50.0%
GGGGAAGATTGTTGAGAAGG+TGG + Chr5:88114020-88114039 None:intergenic 50.0%
GTAGATCCACGTGACACAGT+CGG - Chr5:88114086-88114105 MsG0580028890.01.T01:CDS 50.0%
TGAAGTTGTGTCAGCCTGTC+AGG + Chr5:88114724-88114743 None:intergenic 50.0%
TGAGGGGTGGGAAATATAGG+GGG - Chr5:88115499-88115518 MsG0580028890.01.T01:intron 50.0%
TTAAGGGCTCAAGAACGGGT+TGG - Chr5:88116588-88116607 MsG0580028890.01.T01:CDS 50.0%
! AGAAAGGTGTGCATACTCGG+AGG + Chr5:88115324-88115343 None:intergenic 50.0%
! CTTTGTTTGCGAGACTGGAG+GGG + Chr5:88115778-88115797 None:intergenic 50.0%
! CTTTGTTTGCGAGTTCGGAG+GGG - Chr5:88115458-88115477 MsG0580028890.01.T01:intron 50.0%
! GATCGCCATTCGGTGAAAGA+AGG + Chr5:88114041-88114060 None:intergenic 50.0%
! GGTCTTGACGTGTGGTGTTA+GGG + Chr5:88114609-88114628 None:intergenic 50.0%
! GTGCTGATCAGCAATGTTGC+TGG - Chr5:88116539-88116558 MsG0580028890.01.T01:CDS 50.0%
! GTGGCGCGTGCTTTGAATTA+CGG - Chr5:88114201-88114220 MsG0580028890.01.T01:CDS 50.0%
! TCGCCATTCGGTGAAAGAAG+GGG + Chr5:88114039-88114058 None:intergenic 50.0%
!! AAGAACGGGTTGGCTTCCAA+TGG - Chr5:88116598-88116617 MsG0580028890.01.T01:CDS 50.0%
!! AGAACGGGTTGGCTTCCAAT+GGG - Chr5:88116599-88116618 MsG0580028890.01.T01:CDS 50.0%
!! GCTTTGTTTGCGAGACTGGA+GGG + Chr5:88115779-88115798 None:intergenic 50.0%
!! GCTTTGTTTGCGAGTTCGGA+GGG - Chr5:88115457-88115476 MsG0580028890.01.T01:intron 50.0%
CGTCTCATCAGCTGCCAGTT+TGG + Chr5:88115883-88115902 None:intergenic 55.0%
CTGTGTCACGTGGATCTACC+GGG + Chr5:88114085-88114104 None:intergenic 55.0%
GGAGGAGCAGTCAAGTGGTA+TGG + Chr5:88115306-88115325 None:intergenic 55.0%
GGCTTCCAATGGGTCGGAAT+TGG - Chr5:88116609-88116628 MsG0580028890.01.T01:CDS 55.0%
GGGTCTTGACGTGTGGTGTT+AGG + Chr5:88114610-88114629 None:intergenic 55.0%
GGGTTTACGGTTGAAGGTGG+TGG - Chr5:88114302-88114321 MsG0580028890.01.T01:CDS 55.0%
GGTTACGGCATGGCAACTGT+TGG - Chr5:88114143-88114162 MsG0580028890.01.T01:CDS 55.0%
GTCGGAATTGGGGCCAAAAC+TGG - Chr5:88116621-88116640 MsG0580028890.01.T01:CDS 55.0%
TACTCGGAGGAGCAGTCAAG+TGG + Chr5:88115311-88115330 None:intergenic 55.0%
TCACCGCAACGATGTCTCCA+TGG + Chr5:88116565-88116584 None:intergenic 55.0%
TGGAGACATCGTTGCGGTGA+AGG - Chr5:88116565-88116584 MsG0580028890.01.T01:CDS 55.0%
TGGCCATGGAGACATCGTTG+CGG - Chr5:88116559-88116578 MsG0580028890.01.T01:CDS 55.0%
TGTGTCACGTGGATCTACCG+GGG + Chr5:88114084-88114103 None:intergenic 55.0%
TTTGCGAGTTCGGAGGGGAA+GGG - Chr5:88115463-88115482 MsG0580028890.01.T01:intron 55.0%
! AGAAGGTGGTGGTTGAGACG+AGG + Chr5:88114006-88114025 None:intergenic 55.0%
!! GGCTTTGTTTGCGAGACTGG+AGG + Chr5:88115780-88115799 None:intergenic 55.0%
!! GGCTTTGTTTGCGAGTTCGG+AGG - Chr5:88115456-88115475 MsG0580028890.01.T01:intron 55.0%
AAGGGGAAGGGAGGGCTTTG+AGG - Chr5:88115481-88115500 MsG0580028890.01.T01:intron 60.0%
AGTTCGGAGGGGAAGGGGAA+GGG - Chr5:88115469-88115488 MsG0580028890.01.T01:intron 60.0%
ATCTACCGGGGCGTAGTACG+TGG + Chr5:88114072-88114091 None:intergenic 60.0%
GAGACTGGAGGGGAGGACTT+TGG + Chr5:88115768-88115787 None:intergenic 60.0%
GATCCACGTGACACAGTCGG+CGG - Chr5:88114089-88114108 MsG0580028890.01.T01:CDS 60.0%
GTTTGCGAGTTCGGAGGGGA+AGG - Chr5:88115462-88115481 MsG0580028890.01.T01:intron 60.0%
TAGAGCTGGGTGTGCACTGC+AGG - Chr5:88116175-88116194 MsG0580028890.01.T01:intron 60.0%
TGGCCCCAATTCCGACCCAT+TGG + Chr5:88116617-88116636 None:intergenic 60.0%
TGTTTGCGAGACTGGAGGGG+AGG + Chr5:88115775-88115794 None:intergenic 60.0%
TTGCGAGTTCGGAGGGGAAG+GGG - Chr5:88115464-88115483 MsG0580028890.01.T01:intron 60.0%
! AGGGGAAGGGAGGGCTTTGA+GGG - Chr5:88115482-88115501 MsG0580028890.01.T01:intron 60.0%
!! AAGGGAGGGCTTTGAGGGGT+GGG - Chr5:88115487-88115506 MsG0580028890.01.T01:intron 60.0%
!! CGGGTTGGCTTCCAATGGGT+CGG - Chr5:88116603-88116622 MsG0580028890.01.T01:CDS 60.0%
GAGTTCGGAGGGGAAGGGGA+AGG - Chr5:88115468-88115487 MsG0580028890.01.T01:intron 65.0%
!! GAAGGGAGGGCTTTGAGGGG+TGG - Chr5:88115486-88115505 MsG0580028890.01.T01:intron 65.0%
!! GGGGAAGGGAGGGCTTTGAG+GGG - Chr5:88115483-88115502 MsG0580028890.01.T01:intron 65.0%
ACGCGCCACGTACTACGCCC+CGG - Chr5:88114064-88114083 MsG0580028890.01.T01:exon 70.0%
CGGAGGGGAAGGGGAAGGGA+GGG - Chr5:88115473-88115492 MsG0580028890.01.T01:intron 70.0%
GGCGCGTGCGGATCGCCATT+CGG + Chr5:88114051-88114070 None:intergenic 70.0%
GGCGTAGTACGTGGCGCGTG+CGG + Chr5:88114063-88114082 None:intergenic 70.0%
GTCGGCGGCGCGTGTGGTTA+CGG - Chr5:88114104-88114123 MsG0580028890.01.T01:CDS 70.0%
TCGGAGGGGAAGGGGAAGGG+AGG - Chr5:88115472-88115491 MsG0580028890.01.T01:intron 70.0%
GACACAGTCGGCGGCGCGTG+TGG - Chr5:88114098-88114117 MsG0580028890.01.T01:CDS 75.0%
! GCGCCGCCGACTGTGTCACG+TGG + Chr5:88114095-88114114 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 88113790 88117059 88113790 ID=MsG0580028890.01;Name=MsG0580028890.01
Chr5 mRNA 88113790 88117059 88113790 ID=MsG0580028890.01.T01;Parent=MsG0580028890.01;Name=MsG0580028890.01.T01;_AED=0.40;_eAED=0.40;_QI=134|1|1|1|1|1|2|275|269
Chr5 exon 88113790 88114374 88113790 ID=MsG0580028890.01.T01:exon:25781;Parent=MsG0580028890.01.T01
Chr5 exon 88116426 88117059 88116426 ID=MsG0580028890.01.T01:exon:25780;Parent=MsG0580028890.01.T01
Chr5 five_prime_UTR 88116926 88117059 88116926 ID=MsG0580028890.01.T01:five_prime_utr;Parent=MsG0580028890.01.T01
Chr5 CDS 88116426 88116925 88116426 ID=MsG0580028890.01.T01:cds;Parent=MsG0580028890.01.T01
Chr5 CDS 88114065 88114374 88114065 ID=MsG0580028890.01.T01:cds;Parent=MsG0580028890.01.T01
Chr5 three_prime_UTR 88113790 88114064 88113790 ID=MsG0580028890.01.T01:three_prime_utr;Parent=MsG0580028890.01.T01
Gene Sequence

>MsG0580028890.01.T01

ATGTTACTTACAACGTTCTTCTTTCTCTTTACACTCTCTTCAACAACAACAACAACCGTTACATCTCACTACTCTTCTTCCTCGTCTCAACCACCACCTTCTCAACAATCTTCCCCTTCTTTCACCGAATGGCGATCCGCACGCGCCACGTACTACGCCCCGGTAGATCCACGTGACACAGTCGGCGGCGCGTGTGGTTACGGAGACTTATCAAAAGCCGGTTACGGCATGGCAACTGTTGGTCTTAGTGAAGCTTTGTTTGAACGAGGTCAGATCTGTGGCGCGTGCTTTGAATTACGGTGTGTGGATGATTTAAAGTGGTGTATTCCTGGAACTTCGATTATTGTTACTGCTACGAACTTCTGTGCGCCGAATTATGGGTTTACGGTTGAAGGTGGTGGACATTGTAATCCTCCTAATAAGCACTTTGTTCTTCCTATTGATGCTTTTGAGAAGATCGCTATTTGGAAAGCTGGTAACATGCCTCTTCAGTATCGTAGGATAAAGTGCAGAAGGGAAGGTGGAGTCCGATTTACTGTCACTGGTTCTGGTATCTTCATTTCAGTGCTGATCAGCAATGTTGCTGGCCATGGAGACATCGTTGCGGTGAAGGTTAAGGGCTCAAGAACGGGTTGGCTTCCAATGGGTCGGAATTGGGGCCAAAACTGGCATATAAACGCGTTACTACAGAATCAACCTCTTTCATTTGAGGTTACGAGTAGTGATGGGAAAACAGTCACGGCTTACAATGTTGCTCCCAAAGATTGGAGTTTTGGACAAACCTTTGAAGGGAAGCAATTTGATTATTAA
Protein sequence

>MsG0580028890.01.T01

MLLTTFFFLFTLSSTTTTTVTSHYSSSSSQPPPSQQSSPSFTEWRSARATYYAPVDPRDTVGGACGYGDLSKAGYGMATVGLSEALFERGQICGACFELRCVDDLKWCIPGTSIIVTATNFCAPNYGFTVEGGGHCNPPNKHFVLPIDAFEKIAIWKAGNMPLQYRRIKCRREGGVRFTVTGSGIFISVLISNVAGHGDIVAVKVKGSRTGWLPMGRNWGQNWHINALLQNQPLSFEVTSSDGKTVTAYNVAPKDWSFGQTFEGKQFDY*