AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007695.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007695.01.T01 MTR_2g030130 99.282 836 2 1 1 832 1 836 0.0 1719
MsG0280007695.01.T01 MTR_4g058970 69.451 838 237 7 4 832 19 846 0.0 1194
MsG0280007695.01.T01 MTR_2g101190 67.467 833 256 9 9 832 10 836 0.0 1162
MsG0280007695.01.T01 MTR_3g109800 66.707 832 257 9 9 832 16 835 0.0 1154
MsG0280007695.01.T01 MTR_8g013980 66.466 832 261 9 9 832 11 832 0.0 1150
MsG0280007695.01.T01 MTR_2g094520 63.377 841 282 9 4 832 13 839 0.0 1098
MsG0280007695.01.T01 MTR_3g109800 66.964 784 239 9 9 784 16 787 0.0 1079
MsG0280007695.01.T01 MTR_3g109800 67.096 699 214 7 9 701 16 704 0.0 964
MsG0280007695.01.T01 MTR_3g109800 62.584 596 211 7 245 832 3 594 0.0 782
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007695.01.T01 AT2G34710 78.427 839 163 10 7 832 19 852 0.0 1352
MsG0280007695.01.T01 AT1G30490 76.576 841 168 11 7 832 15 841 0.0 1325
MsG0280007695.01.T01 AT5G60690 66.982 845 246 11 4 832 15 842 0.0 1147
MsG0280007695.01.T01 AT1G52150 66.228 835 260 13 9 832 13 836 0.0 1128
MsG0280007695.01.T01 AT1G52150 66.268 836 259 14 9 832 13 837 0.0 1126
MsG0280007695.01.T01 AT4G32880 64.586 833 276 12 9 832 11 833 0.0 1109
MsG0280007695.01.T01 AT1G52150 66.074 787 245 13 9 784 13 788 0.0 1051
MsG0280007695.01.T01 AT5G32670 80.000 70 14 0 286 355 37 106 1.32e-31 122
MsG0280007695.01.T01 AT4G04890 30.534 131 62 3 13 122 65 187 2.92e-11 67.8
MsG0280007695.01.T01 AT4G04890 21.569 510 302 19 189 670 297 736 9.68e-11 66.2
MsG0280007695.01.T01 AT4G04890 30.534 131 62 3 13 122 65 187 2.92e-11 67.8
MsG0280007695.01.T01 AT4G04890 21.569 510 302 19 189 670 297 736 9.68e-11 66.2
MsG0280007695.01.T01 AT4G21750 23.625 309 191 10 189 478 306 588 3.01e-11 67.8
MsG0280007695.01.T01 AT4G21750 23.625 309 191 10 189 478 306 588 3.01e-11 67.8
MsG0280007695.01.T01 AT4G21750 23.625 309 191 10 189 478 306 588 3.01e-11 67.8
MsG0280007695.01.T01 AT4G21750 23.625 309 191 10 189 478 306 588 3.01e-11 67.8
MsG0280007695.01.T01 AT3G61150 31.783 129 67 3 13 124 113 237 9.94e-11 66.2

Find 245 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGATACTTAACTGATTT+AGG 0.211026 2:+19357355 None:intergenic
CGTGCCAGTGCAACATCTTC+TGG 0.212898 2:+19357628 None:intergenic
CCACTCTCTTTCATAGAAAA+TGG 0.263136 2:+19361174 None:intergenic
AGTGATTCTCAAAGGTAAAT+TGG 0.270937 2:+19357123 None:intergenic
TCTCATCTGGTGTATGAAAA+TGG 0.286768 2:-19360064 MsG0280007695.01.T01:CDS
GATGCCCTCTTATTGCCTTC+TGG 0.294752 2:-19357400 MsG0280007695.01.T01:CDS
CGATCAGAATGGGCTGATTA+TGG 0.299721 2:-19357904 MsG0280007695.01.T01:CDS
TCCAAAGCTTCAACTTGTTC+AGG 0.301125 2:+19360982 None:intergenic
AAAGTTAAGTATCTTGATTA+TGG 0.305354 2:+19356234 None:intergenic
CGATGACGGTTGGTCGTTGC+TGG 0.308758 2:-19358207 MsG0280007695.01.T01:CDS
CTTGGGCCAAAGTCTCTTCC+TGG 0.311536 2:-19356996 MsG0280007695.01.T01:CDS
CTGCAAAGGATTCATCTATA+GGG 0.317197 2:+19357425 None:intergenic
CGTGCCAAAGCATGAGCTTC+TGG 0.318520 2:+19356969 None:intergenic
GCTTCTACTGGTGGCCCTAC+AGG 0.321934 2:-19358866 MsG0280007695.01.T01:CDS
CCCTTTGAGGACGCTGAGTT+GGG 0.322005 2:+19359789 None:intergenic
CGCTATCCCACTAGAGTTGC+GGG 0.322607 2:+19359427 None:intergenic
TCATCAATGTTCCCAACATT+TGG 0.323462 2:-19358113 MsG0280007695.01.T01:CDS
TAGAGGGGCCTCAGAACTTC+AGG 0.327055 2:+19358633 None:intergenic
TGGCTGCAGCACGAGACTTT+TGG 0.327088 2:-19359035 MsG0280007695.01.T01:CDS
AATTACCTGTTGCATAATCT+TGG 0.333667 2:+19356509 None:intergenic
CTGGGAAAGCCACCGGGTCT+TGG 0.333766 2:+19357826 None:intergenic
TCTGCAAAGGATTCATCTAT+AGG 0.335291 2:+19357424 None:intergenic
CACCCAGTCGACAGCAGTTC+CGG 0.346069 2:+19359595 None:intergenic
GTGATCAACAATATGAATAA+TGG 0.348818 2:+19358766 None:intergenic
AACCTAAACAGATCAAAGTT+TGG 0.353061 2:-19360876 MsG0280007695.01.T01:CDS
GTTCTTCTTCTTCACTCTGC+AGG 0.354478 2:+19361131 None:intergenic
TGAAAATGATGAAGCTAGTT+TGG 0.359530 2:+19361109 None:intergenic
CGTGCTGCAGCCAAAGTTGT+AGG 0.366709 2:+19359045 None:intergenic
TCCTGAACAAGTTGAAGCTT+TGG 0.370693 2:-19360983 MsG0280007695.01.T01:CDS
AACCAAACTTTGATCTGTTT+AGG 0.371881 2:+19360874 None:intergenic
TGGTTTGAAAAGGTGAATAT+TGG 0.372040 2:+19356636 None:intergenic
GGAATTGATGAAAATTCAAT+TGG 0.372836 2:-19357472 MsG0280007695.01.T01:CDS
TAGCTTTCATGTTCATCAAC+TGG 0.374323 2:-19356277 MsG0280007695.01.T01:CDS
GAAAACCAGAAGGCAATAAG+AGG 0.376994 2:+19357395 None:intergenic
TGCAATGAACAAGCTCTTGA+TGG 0.381020 2:-19360116 MsG0280007695.01.T01:CDS
AGGTGTTGGCAGAGAGAGAT+GGG 0.382069 2:+19361236 None:intergenic
ACTGAGATATACTACAAGTT+TGG 0.384206 2:-19359010 MsG0280007695.01.T01:CDS
GACGTATGCGCCTACAACTT+TGG 0.386052 2:-19359055 MsG0280007695.01.T01:CDS
CCTGGCAGAGTTCCTATCTA+AGG 0.394397 2:-19359621 MsG0280007695.01.T01:CDS
CAACTGTCTTGGATAGTATC+AGG 0.412660 2:+19356154 None:intergenic
TCTCGGCCAGGTACTCAGCT+TGG 0.412971 2:-19357014 MsG0280007695.01.T01:CDS
GTCGACTGGGTGCAGATGAT+TGG 0.420555 2:-19359584 MsG0280007695.01.T01:CDS
CCACAACACTACGCACATAC+TGG 0.420779 2:+19357072 None:intergenic
AGGTAAAATGACCTGGCTGC+TGG 0.424070 2:+19357807 None:intergenic
CTCGGCCAGGTACTCAGCTT+GGG 0.425766 2:-19357013 MsG0280007695.01.T01:CDS
CACGTTTACAGACGGTGAAT+AGG 0.431144 2:-19360147 MsG0280007695.01.T01:CDS
CGTCCATCTGGTGAAGGTGC+TGG 0.432133 2:-19357188 MsG0280007695.01.T01:CDS
TGTCTTTGTGTAGCCTGGTC+CGG 0.433455 2:-19359474 MsG0280007695.01.T01:intron
GGGTTGTTTGCATCCCTTTG+AGG 0.434329 2:+19359776 None:intergenic
CTTCCTTTCTTTGCTTCTCA+CGG 0.436865 2:+19360173 None:intergenic
TTCGCCAGAAGCTCATGCTT+TGG 0.437914 2:-19356973 MsG0280007695.01.T01:CDS
GAAAATTAGTACAACTGTCT+TGG 0.439310 2:+19356143 None:intergenic
GTTCTCCAAGATTATGCAAC+AGG 0.439721 2:-19356514 MsG0280007695.01.T01:intron
TCTAGTAATGCTCGTCCATC+TGG 0.440636 2:-19357200 MsG0280007695.01.T01:CDS
CTGGCTGCTGGGAAAGCCAC+CGG 0.441166 2:+19357819 None:intergenic
GTGCCAGTGCAACATCTTCT+GGG 0.442652 2:+19357629 None:intergenic
GAGCATTAGAATAGTTCAAA+AGG 0.443481 2:+19356104 None:intergenic
GAAAGAGAGTGGAGGCTCTC+TGG 0.444736 2:-19361163 MsG0280007695.01.T01:five_prime_UTR
ATAGAAAATGGTGAGGTTGA+AGG 0.445451 2:+19361186 None:intergenic
TCCCTTTGAGGACGCTGAGT+TGG 0.445674 2:+19359788 None:intergenic
CAGGGTTATGCATCTCTGCC+AGG 0.448828 2:-19356392 MsG0280007695.01.T01:CDS
GTTTAGGTTCAATGTTAGAA+AGG 0.451232 2:+19360890 None:intergenic
GCAGAAGCAAGTTTCTCATC+TGG 0.452876 2:-19360077 MsG0280007695.01.T01:CDS
TTTGTGTATCAAGTATGAAT+AGG 0.458792 2:-19356364 MsG0280007695.01.T01:CDS
TCAGCTCTCACAAAATTTGA+CGG 0.461588 2:+19358836 None:intergenic
AAGGTGTTGGCAGAGAGAGA+TGG 0.461612 2:+19361235 None:intergenic
GCATGAGCTTCTGGCGAACC+AGG 0.462184 2:+19356978 None:intergenic
TCCAGTGGAGAAATTCAGTA+TGG 0.463307 2:-19358458 MsG0280007695.01.T01:CDS
CTACCGGAACTGCTGTCGAC+TGG 0.464066 2:-19359598 MsG0280007695.01.T01:CDS
CTGCAGTAGCATTGATGCCT+TGG 0.464912 2:+19358073 None:intergenic
TAGTCTTCTCGCCGTGGCTG+AGG 0.466571 2:-19359648 MsG0280007695.01.T01:CDS
TGTTGTCTTCTCAAAGAACT+AGG 0.467328 2:+19360934 None:intergenic
TCGACTGGGTGCAGATGATT+GGG 0.468510 2:-19359583 MsG0280007695.01.T01:CDS
CAGTTCCGGTAGCCTTAGAT+AGG 0.468587 2:+19359609 None:intergenic
AGAACATTGGATTTACTTGA+AGG 0.468751 2:-19357224 MsG0280007695.01.T01:CDS
CCATGGCAATTGCGCCCTCT+CGG 0.469500 2:-19357031 MsG0280007695.01.T01:CDS
TAGCCTGGTCCGGAATCTAT+TGG 0.469832 2:-19359464 MsG0280007695.01.T01:CDS
CTTGGACACGGAACTGCATA+GGG 0.470550 2:+19357844 None:intergenic
ACTATGTGTCTACATACATA+TGG 0.472794 2:+19355988 None:intergenic
TAAATTGGAATGCAATTGTA+AGG 0.473795 2:+19357138 None:intergenic
ACTTTCTATGCATAAAGAAA+TGG 0.474459 2:-19361031 MsG0280007695.01.T01:CDS
CTTCTCAAAGAACTAGGCTT+AGG 0.476477 2:+19360940 None:intergenic
ATGCAATATTGAAACAACTT+TGG 0.476907 2:-19356790 MsG0280007695.01.T01:CDS
ATTAAGAACTTTCCATGCAA+TGG 0.481074 2:+19356322 None:intergenic
CCCAACTCAGCGTCCTCAAA+GGG 0.484390 2:-19359789 MsG0280007695.01.T01:CDS
CTCTAGACTCACAAGGCCGC+AGG 0.485153 2:+19359397 None:intergenic
GGCGAACCAGGAAGAGACTT+TGG 0.485486 2:+19356990 None:intergenic
TCTTGGACACGGAACTGCAT+AGG 0.487296 2:+19357843 None:intergenic
TCAACTGGTCCTTTGTCTGA+TGG 0.487503 2:-19356262 MsG0280007695.01.T01:exon
GCGCGACAATGTGGCTTCCA+TGG 0.487773 2:-19357099 MsG0280007695.01.T01:CDS
CCTTAGATAGGAACTCTGCC+AGG 0.488058 2:+19359621 None:intergenic
GCAATTGCGCCCTCTCGGCC+AGG 0.488973 2:-19357026 MsG0280007695.01.T01:CDS
CATGAAAGCTAAGCAGTGAT+TGG 0.490947 2:+19356289 None:intergenic
CAAGCATGTCTAGTCCAGCC+TGG 0.492233 2:+19356616 None:intergenic
GGTGAAGGTGCTGGTTCAAA+CGG 0.495460 2:-19357179 MsG0280007695.01.T01:CDS
CTTCTACTGGTGGCCCTACA+GGG 0.495589 2:-19358865 MsG0280007695.01.T01:CDS
CAACAAAATAATACCTTAGT+GGG 0.496377 2:+19359374 None:intergenic
ACAACAAAATAATACCTTAG+TGG 0.496744 2:+19359373 None:intergenic
GGTAAAATGACCTGGCTGCT+GGG 0.497199 2:+19357808 None:intergenic
CGCCGTGGCTGAGGAGACCC+TGG 0.498447 2:-19359639 MsG0280007695.01.T01:CDS
GAGGGAGCATCGATCAGAAT+GGG 0.498992 2:-19357914 MsG0280007695.01.T01:CDS
AGGGATGCAAACAACCCAGC+TGG 0.499948 2:-19359770 MsG0280007695.01.T01:CDS
CCTGGAGGTAGTTCGTATAG+AGG 0.500505 2:-19357665 MsG0280007695.01.T01:CDS
CTTAACTGATTTAGGATCCA+AGG 0.504335 2:+19357363 None:intergenic
AAAGGTGTTACTAACCCAGC+TGG 0.505524 2:+19359755 None:intergenic
GCTGTTTCCCGCAACTCTAG+TGG 0.506941 2:-19359434 MsG0280007695.01.T01:CDS
CAGTCTATCTTTAAGAATCT+CGG 0.507367 2:+19359267 None:intergenic
AGACACCACCTCCAAATGTT+GGG 0.507773 2:+19358102 None:intergenic
TGAGGGAGCATCGATCAGAA+TGG 0.509076 2:-19357915 MsG0280007695.01.T01:CDS
TGGATGCTGGTAAATATGTA+AGG 0.509737 2:-19361011 MsG0280007695.01.T01:CDS
AAACACAATGATGATATCCT+TGG 0.512064 2:+19355956 None:intergenic
TACCGGAACTGCTGTCGACT+GGG 0.512119 2:-19359597 MsG0280007695.01.T01:CDS
TCAATGTTCCCAACATTTGG+AGG 0.512154 2:-19358110 MsG0280007695.01.T01:CDS
TGGGAACATTGATGAATAGT+TGG 0.512795 2:+19358121 None:intergenic
CTAAAAGTTCTCAAAACAGC+TGG 0.514675 2:+19358422 None:intergenic
TTTGGCCCAAGCTGAGTACC+TGG 0.517249 2:+19357008 None:intergenic
TCCAATGTTCTTGATGTGGT+TGG 0.518577 2:+19357236 None:intergenic
TAGTCCAGCCTGGTTTGAAA+AGG 0.518962 2:+19356626 None:intergenic
TGGTGAGGTTGAAGGTGGTA+AGG 0.519188 2:+19361194 None:intergenic
AGTATTGTTCCCACTGGTGG+TGG 0.521836 2:-19359208 MsG0280007695.01.T01:CDS
CTTGAGACAAGTAGCAGAGT+AGG 0.522118 2:+19357873 None:intergenic
GGGATAGCGGCGCGAGCCTG+CGG 0.522988 2:-19359413 MsG0280007695.01.T01:CDS
GCAACGATACCAATAGATTC+CGG 0.523309 2:+19359455 None:intergenic
AAGACACCACCTCCAAATGT+TGG 0.525330 2:+19358101 None:intergenic
CGGTGGCTTTCCCAGCAGCC+AGG 0.526408 2:-19357818 MsG0280007695.01.T01:CDS
AGAAAAGAGAGAGAAGGTGT+TGG 0.528680 2:+19361222 None:intergenic
GATAAAGTTCTTGATGAAGC+TGG 0.529856 2:-19356558 MsG0280007695.01.T01:CDS
CTTATTAGACCTTGCGAGGG+GGG 0.531367 2:-19358794 MsG0280007695.01.T01:CDS
GATGGATATCTAGAAGCTAC+AGG 0.533976 2:-19356947 MsG0280007695.01.T01:intron
TGGTCGTTGCTGGGAAATGA+TGG 0.534044 2:-19358197 MsG0280007695.01.T01:CDS
AGCTGAGTACCTGGCCGAGA+GGG 0.534467 2:+19357017 None:intergenic
CCTCTATACGAACTACCTCC+AGG 0.536475 2:+19357665 None:intergenic
CCGAGAGGGCGCAATTGCCA+TGG 0.536523 2:+19357031 None:intergenic
GTTCAAACGGATACAACCTT+AGG 0.536568 2:-19357166 MsG0280007695.01.T01:CDS
TGCTCGATCGTAGGAGCAAG+AGG 0.537333 2:+19357787 None:intergenic
ATTGTTCCCACTGGTGGTGG+TGG 0.537797 2:-19359205 MsG0280007695.01.T01:CDS
ACCCAACTCAGCGTCCTCAA+AGG 0.537810 2:-19359790 MsG0280007695.01.T01:CDS
ATACCAATAGATTCCGGACC+AGG 0.538578 2:+19359461 None:intergenic
CTGTTTCCCGCAACTCTAGT+GGG 0.539369 2:-19359433 MsG0280007695.01.T01:CDS
ACCATACTGAATTTCTCCAC+TGG 0.540930 2:+19358457 None:intergenic
CTCCCCAGAAGATGTTGCAC+TGG 0.541488 2:-19357632 MsG0280007695.01.T01:CDS
TATACTACAAGTTTGGAAGA+TGG 0.542037 2:-19359003 MsG0280007695.01.T01:CDS
CAAGGCATCAATGCTACTGC+AGG 0.542378 2:-19358072 MsG0280007695.01.T01:intron
GGGTTCAATGATGCTGTGAA+TGG 0.547394 2:-19358236 MsG0280007695.01.T01:CDS
TATGTATGTAGACACATAGT+AGG 0.547817 2:-19355985 MsG0280007695.01.T01:three_prime_UTR
ATGCATAAAGAAATGGATGC+TGG 0.548344 2:-19361024 MsG0280007695.01.T01:CDS
ACCTCTTCGTGCTCGATCGT+AGG 0.549405 2:+19357778 None:intergenic
GAGAAACTTGCTTCTGCAGA+CGG 0.551279 2:+19360083 None:intergenic
TGGCTGCTGGGAAAGCCACC+GGG 0.551326 2:+19357820 None:intergenic
GGTGCAGATGATTGGGATGA+AGG 0.553628 2:-19359576 MsG0280007695.01.T01:intron
TTGAGTATTGTTCCCACTGG+TGG 0.554422 2:-19359211 MsG0280007695.01.T01:CDS
GGAGAAATTCAGTATGGTGG+CGG 0.556309 2:-19358452 MsG0280007695.01.T01:CDS
AGATCGTTGAATGCTTCTAC+TGG 0.557406 2:-19358878 MsG0280007695.01.T01:CDS
GAGAAATTCAGTATGGTGGC+GGG 0.558050 2:-19358451 MsG0280007695.01.T01:CDS
AAGTTTGGTTTCAAAACCGA+AGG 0.558405 2:-19360861 MsG0280007695.01.T01:intron
GTGTTGTGGCATCAGTTCAG+AGG 0.560143 2:-19357058 MsG0280007695.01.T01:CDS
AAGTTCTTGATGAAGCTGGC+AGG 0.560167 2:-19356554 MsG0280007695.01.T01:CDS
TGTTGTGGCATCAGTTCAGA+GGG 0.563344 2:-19357057 MsG0280007695.01.T01:CDS
CTCACAAAATTTGACGGAGA+AGG 0.564082 2:+19358842 None:intergenic
TTGACGGAGAAGGCCCTGTA+GGG 0.564292 2:+19358852 None:intergenic
AGCACATAATTGCATCAGAA+TGG 0.566597 2:+19356765 None:intergenic
TTCCTTATTAGACCTTGCGA+GGG 0.569278 2:-19358797 MsG0280007695.01.T01:CDS
ATGTTCCCAACATTTGGAGG+TGG 0.569970 2:-19358107 MsG0280007695.01.T01:CDS
CAATTGTAAGGACCGACCTA+AGG 0.571125 2:+19357150 None:intergenic
ACGCACATACTGGCGAGCCA+TGG 0.571373 2:+19357082 None:intergenic
ATCAGTTCAGAGGGTTGCCA+TGG 0.571681 2:-19357048 MsG0280007695.01.T01:CDS
GGTTCAATGTTAGAAAGGAT+AGG 0.572911 2:+19360895 None:intergenic
AAGCCACCGGGTCTTGGACA+CGG 0.573476 2:+19357832 None:intergenic
CCGCTATCCCACTAGAGTTG+CGG 0.574881 2:+19359426 None:intergenic
TTTCCTTATTAGACCTTGCG+AGG 0.575216 2:-19358798 MsG0280007695.01.T01:CDS
GAACCAGCACCTTCACCAGA+TGG 0.575410 2:+19357185 None:intergenic
GGAGTGTCCCTGAAGTTCTG+AGG 0.576646 2:-19358641 MsG0280007695.01.T01:CDS
TCCAACCACATCAAGAACAT+TGG 0.578165 2:-19357237 MsG0280007695.01.T01:CDS
TTCTATTAGTCTTCTCGCCG+TGG 0.578172 2:-19359654 MsG0280007695.01.T01:intron
GTATTGAGTATTGTTCCCAC+TGG 0.580551 2:-19359214 MsG0280007695.01.T01:CDS
CTTATGAGCAAGCCATTGCA+TGG 0.582458 2:-19356334 MsG0280007695.01.T01:CDS
GTTGGCAGAGAGAGATGGGA+TGG 0.582855 2:+19361240 None:intergenic
TTTGACGGAGAAGGCCCTGT+AGG 0.582982 2:+19358851 None:intergenic
TTAACTGATTTAGGATCCAA+GGG 0.583082 2:+19357364 None:intergenic
GAGTTCCTATCTAAGGCTAC+CGG 0.583759 2:-19359614 MsG0280007695.01.T01:CDS
ACTTATATATATAGTCATAG+AGG 0.584899 2:+19356082 None:intergenic
AATAGAGCTTATGTACATGC+AGG 0.586783 2:-19359179 MsG0280007695.01.T01:intron
GATGACGGTTGGTCGTTGCT+GGG 0.587967 2:-19358206 MsG0280007695.01.T01:CDS
ATGCCGTGAGAAGCAAAGAA+AGG 0.588074 2:-19360176 MsG0280007695.01.T01:CDS
GGGATGCAAACAACCCAGCT+GGG 0.589348 2:-19359769 MsG0280007695.01.T01:intron
GTAGAGAGAAAAGAGAGAGA+AGG 0.589473 2:+19361216 None:intergenic
CTTGATACACAAATCCCTCC+TGG 0.589795 2:+19356374 None:intergenic
GTGAATGGATTTGTCGATGA+CGG 0.594332 2:-19358221 MsG0280007695.01.T01:CDS
GCAGTTCCGTGTCCAAGACC+CGG 0.594391 2:-19357838 MsG0280007695.01.T01:CDS
TTTGGAAGATGGAAGTCTTG+TGG 0.594978 2:-19358992 MsG0280007695.01.T01:intron
ATGGATTTGTCGATGACGGT+TGG 0.598019 2:-19358217 MsG0280007695.01.T01:CDS
CCTTATTAGACCTTGCGAGG+GGG 0.598121 2:-19358795 MsG0280007695.01.T01:CDS
TGCAAAGGATTCATCTATAG+GGG 0.599441 2:+19357426 None:intergenic
AGACAATAGCTGTGATTCTG+TGG 0.600443 2:-19359840 MsG0280007695.01.T01:CDS
AAGCTCATGCTTTGGCACGA+TGG 0.600650 2:-19356965 MsG0280007695.01.T01:CDS
CCGCAACTCTAGTGGGATAG+CGG 0.602930 2:-19359426 MsG0280007695.01.T01:CDS
CTCTTTCATAGAAAATGGTG+AGG 0.604373 2:+19361179 None:intergenic
CTGGAGGTAGTTCGTATAGA+GGG 0.605982 2:-19357664 MsG0280007695.01.T01:CDS
AACTTGTTGCAGCTTTGCAG+TGG 0.607045 2:-19357493 MsG0280007695.01.T01:intron
TCCTACGATCGAGCACGAAG+AGG 0.610109 2:-19357779 MsG0280007695.01.T01:intron
GAAAATGGTGAGGTTGAAGG+TGG 0.611244 2:+19361189 None:intergenic
AGAGGGGCCTCAGAACTTCA+GGG 0.614871 2:+19358634 None:intergenic
AGGTGGTGTCTTGTGTGCCA+AGG 0.616015 2:-19358090 MsG0280007695.01.T01:CDS
TAAATCCAATGTTCTTGATG+TGG 0.616299 2:+19357232 None:intergenic
TCGTTGAATGCTTCTACTGG+TGG 0.616426 2:-19358875 MsG0280007695.01.T01:CDS
TATTGTACCACCACCACCAG+TGG 0.616482 2:+19359198 None:intergenic
TAAGAGGGCATCATCTGCAA+AGG 0.617843 2:+19357411 None:intergenic
TGCCAGGGTCTCCTCAGCCA+CGG 0.620608 2:+19359637 None:intergenic
GAGCAAGAGGTAAAATGACC+TGG 0.621422 2:+19357800 None:intergenic
TCCTTATTAGACCTTGCGAG+GGG 0.621648 2:-19358796 MsG0280007695.01.T01:CDS
AAGTTCTCAAAACAGCTGGT+TGG 0.626436 2:+19358426 None:intergenic
GTCGCGCAAGTGATTCTCAA+AGG 0.627622 2:+19357115 None:intergenic
CTTAGATAGGAACTCTGCCA+GGG 0.627679 2:+19359622 None:intergenic
TACTCAATACATCAACGCAT+CGG 0.631222 2:+19359227 None:intergenic
ATGGCTTGCTCATAAGACAC+TGG 0.631254 2:+19356341 None:intergenic
GTTATGCATCTCTGCCAGGA+GGG 0.632885 2:-19356388 MsG0280007695.01.T01:CDS
AATGCTCGTCCATCTGGTGA+AGG 0.634918 2:-19357194 MsG0280007695.01.T01:CDS
GGAAGCTTCACGTTTACAGA+CGG 0.636666 2:-19360155 MsG0280007695.01.T01:CDS
AAGGTGTTACTAACCCAGCT+GGG 0.638352 2:+19359756 None:intergenic
TGTGAGTCTAGAGCCCACTA+AGG 0.639840 2:-19359387 MsG0280007695.01.T01:intron
ATGGTTTCTCCATCAGACAA+AGG 0.640205 2:+19356253 None:intergenic
AAAACCAGAAGGCAATAAGA+GGG 0.641093 2:+19357396 None:intergenic
CCAGTATGTGCGTAGTGTTG+TGG 0.642038 2:-19357072 MsG0280007695.01.T01:CDS
ATTGTACCACCACCACCAGT+GGG 0.642522 2:+19359199 None:intergenic
GAATCACTTGCGCGACAATG+TGG 0.642715 2:-19357108 MsG0280007695.01.T01:CDS
AGTGGAGAAATTCAGTATGG+TGG 0.644496 2:-19358455 MsG0280007695.01.T01:CDS
CAGATAGCACAAGAATCCAG+TGG 0.652309 2:-19358473 MsG0280007695.01.T01:CDS
GGAATAACTCGAAAACCAGA+AGG 0.653126 2:+19357385 None:intergenic
CAATATTGCATCACTCGCTG+CGG 0.656475 2:+19356802 None:intergenic
TTCTTAAAGATAGACTGTCA+TGG 0.657592 2:-19359261 MsG0280007695.01.T01:CDS
GGTCTAATAAGGAAACCACT+AGG 0.658788 2:+19358806 None:intergenic
TGCCAGTGCAACATCTTCTG+GGG 0.660194 2:+19357630 None:intergenic
AGAATCACAGCTATTGTCTG+TGG 0.665084 2:+19359844 None:intergenic
TGCATTGGTGCAGTTCCTGG+AGG 0.665564 2:-19357680 MsG0280007695.01.T01:intron
AAGCTGAGTACCTGGCCGAG+AGG 0.669722 2:+19357016 None:intergenic
GGTTATGCATCTCTGCCAGG+AGG 0.674411 2:-19356389 MsG0280007695.01.T01:CDS
AATCGAACAAGCAAAGCAGG+AGG 0.677556 2:+19357940 None:intergenic
GATGGAACAAGAAACAGTGA+AGG 0.678037 2:+19361258 None:intergenic
CACATAGTAGGATGTAACCA+AGG 0.683036 2:-19355973 MsG0280007695.01.T01:three_prime_UTR
TAGTGGGCTCTAGACTCACA+AGG 0.690812 2:+19359390 None:intergenic
TGTGATTCTGTGGTAATGAG+TGG 0.695611 2:-19359830 MsG0280007695.01.T01:CDS
AGAGCTGAAATGCTTCCTAG+TGG 0.697674 2:-19358821 MsG0280007695.01.T01:CDS
GTTCCGTGTCCAAGACCCGG+TGG 0.700440 2:-19357835 MsG0280007695.01.T01:CDS
TTGGACACGGAACTGCATAG+GGG 0.719102 2:+19357845 None:intergenic
AAACGGATACAACCTTAGGT+CGG 0.721957 2:-19357162 MsG0280007695.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTGTAATAATAAAATGAT+AGG + Chr2:19358283-19358302 None:intergenic 10.0%
!!! AAATGTTACTAAATTTTAAA+AGG + Chr2:19356801-19356820 None:intergenic 10.0%
!!! AATGTTACTAAATTTTAAAA+GGG + Chr2:19356800-19356819 None:intergenic 10.0%
!! AATGTTACAAAATATTCAAA+GGG + Chr2:19356608-19356627 None:intergenic 15.0%
!! TAATGTTACAAAATATTCAA+AGG + Chr2:19356609-19356628 None:intergenic 15.0%
!! TTCATAATGACAAAAAAAAA+TGG + Chr2:19356511-19356530 None:intergenic 15.0%
!!! CTTGCATTTTAAATATTTAA+AGG + Chr2:19361183-19361202 None:intergenic 15.0%
!!! TAAAATGCAAGTTTTATTTT+GGG - Chr2:19361192-19361211 MsG0280007695.01.T01:five_prime_UTR 15.0%
!!! TTAAAATGCAAGTTTTATTT+TGG - Chr2:19361191-19361210 MsG0280007695.01.T01:five_prime_UTR 15.0%
!!! TTTCTTTTGTAGAATAAATT+AGG + Chr2:19358085-19358104 None:intergenic 15.0%
!! AAAGTTAAGTATCTTGATTA+TGG + Chr2:19361006-19361025 None:intergenic 20.0%
!! ACTTATATATATAGTCATAG+AGG + Chr2:19361158-19361177 None:intergenic 20.0%
!! ATTGAAAGAATGAACAAAAA+AGG + Chr2:19356687-19356706 None:intergenic 20.0%
!! ATTTATTGAAATGATTATGC+TGG - Chr2:19358324-19358343 MsG0280007695.01.T01:intron 20.0%
!! GTAAAAACAAATGTAATAAC+TGG - Chr2:19360500-19360519 MsG0280007695.01.T01:intron 20.0%
!! TATTATTATGTGCTTATTTG+CGG - Chr2:19359529-19359548 MsG0280007695.01.T01:intron 20.0%
!! TTAAGAAAAAAAGAACTTTG+TGG - Chr2:19356729-19356748 MsG0280007695.01.T01:intron 20.0%
!!! AAATGATACTTAACTGATTT+AGG + Chr2:19359885-19359904 None:intergenic 20.0%
!!! CTTTCTTTTTTCTTTAACAA+TGG - Chr2:19356182-19356201 MsG0280007695.01.T01:three_prime_UTR 20.0%
!!! GGAATTTTTTGAATAACTTT+AGG - Chr2:19360793-19360812 MsG0280007695.01.T01:intron 20.0%
!!! GGTATTTAACATTTTTTTTC+AGG - Chr2:19358570-19358589 MsG0280007695.01.T01:intron 20.0%
!!! TAATTTCAAAAGCACATTTT+TGG + Chr2:19356900-19356919 None:intergenic 20.0%
!!! TATGCAATTTAATTTGAACA+TGG - Chr2:19360772-19360791 MsG0280007695.01.T01:intron 20.0%
!!! TGAAAAAATGTTTTCACTTT+TGG - Chr2:19356474-19356493 MsG0280007695.01.T01:intron 20.0%
!!! TGAGAGTATGAATAATAAAT+TGG + Chr2:19358934-19358953 None:intergenic 20.0%
!!! TTAACATTTTTTTTCAGGTT+TGG - Chr2:19358575-19358594 MsG0280007695.01.T01:intron 20.0%
!!! TTGTATATTTTGAAGTAGTA+AGG - Chr2:19359676-19359695 MsG0280007695.01.T01:intron 20.0%
!!! TTTGAATGAAAATAACTTGT+GGG - Chr2:19356541-19356560 MsG0280007695.01.T01:CDS 20.0%
!!! TTTTTGTCATTATGAAAGAA+AGG - Chr2:19356515-19356534 MsG0280007695.01.T01:CDS 20.0%
! AAAACTGAAAAGTTTACCTT+CGG + Chr2:19356395-19356414 None:intergenic 25.0%
! AAAGTCAGAAGAATACTAAA+AGG + Chr2:19360558-19360577 None:intergenic 25.0%
! AAGAAATTTAAATGCCAAAG+GGG + Chr2:19356954-19356973 None:intergenic 25.0%
! AATACATCAACATATGTTTC+AGG + Chr2:19359959-19359978 None:intergenic 25.0%
! ACAACAAAATAATACCTTAG+TGG + Chr2:19357867-19357886 None:intergenic 25.0%
! ACAACCATAAATTGTTCAAT+AGG + Chr2:19357709-19357728 None:intergenic 25.0%
! ACAAGAAATTTAAATGCCAA+AGG + Chr2:19356956-19356975 None:intergenic 25.0%
! ACACAATGCAACAAAAAAAA+AGG + Chr2:19357503-19357522 None:intergenic 25.0%
! ACTTTCTATGCATAAAGAAA+TGG - Chr2:19356206-19356225 MsG0280007695.01.T01:three_prime_UTR 25.0%
! ATGACCTATTGAACAATTTA+TGG - Chr2:19357702-19357721 MsG0280007695.01.T01:intron 25.0%
! ATGCAAATACAAAATACTGA+AGG + Chr2:19359507-19359526 None:intergenic 25.0%
! ATGCAATATTGAAACAACTT+TGG - Chr2:19360447-19360466 MsG0280007695.01.T01:intron 25.0%
! CAACAAAATAATACCTTAGT+GGG + Chr2:19357866-19357885 None:intergenic 25.0%
! CAAGAAATTTAAATGCCAAA+GGG + Chr2:19356955-19356974 None:intergenic 25.0%
! CCTATTCAAAAAGAAAAAGT+TGG + Chr2:19357358-19357377 None:intergenic 25.0%
! CTTTGAATGAAAATAACTTG+TGG - Chr2:19356540-19356559 MsG0280007695.01.T01:CDS 25.0%
! GATAAAAGAAAGAACTTTGA+AGG - Chr2:19356631-19356650 MsG0280007695.01.T01:CDS 25.0%
! GGAATTGATGAAAATTCAAT+TGG - Chr2:19359765-19359784 MsG0280007695.01.T01:intron 25.0%
! GTGATCAACAATATGAATAA+TGG + Chr2:19358474-19358493 None:intergenic 25.0%
! GTTTCATTAAATTAATGCAG+TGG + Chr2:19359916-19359935 None:intergenic 25.0%
! TAAATTGGAATGCAATTGTA+AGG + Chr2:19360102-19360121 None:intergenic 25.0%
! TGAAACAAAACATTAATGCT+TGG - Chr2:19356852-19356871 MsG0280007695.01.T01:intron 25.0%
! TTTGTGTATCAAGTATGAAT+AGG - Chr2:19360873-19360892 MsG0280007695.01.T01:CDS 25.0%
!! ATGTAGTTTTCTGCATTTAA+TGG - Chr2:19356998-19357017 MsG0280007695.01.T01:CDS 25.0%
!! TATATGTTGTTGTCTTTTTC+AGG - Chr2:19360378-19360397 MsG0280007695.01.T01:intron 25.0%
!! TTGAATGAAAATAACTTGTG+GGG - Chr2:19356542-19356561 MsG0280007695.01.T01:CDS 25.0%
!!! AAAATGTTTTCACTTTTGGT+TGG - Chr2:19356478-19356497 MsG0280007695.01.T01:intron 25.0%
!!! AAACATTAATGCTTGGTTTT+TGG - Chr2:19356859-19356878 MsG0280007695.01.T01:intron 25.0%
!!! AATCTGTTGTTATTTTTCCA+GGG - Chr2:19360827-19360846 MsG0280007695.01.T01:intron 25.0%
!!! ACTTTTGAGAATATTATTGC+AGG - Chr2:19360573-19360592 MsG0280007695.01.T01:intron 25.0%
!!! CCAACTTTTTCTTTTTGAAT+AGG - Chr2:19357355-19357374 MsG0280007695.01.T01:intron 25.0%
!!! TAATCTGTTGTTATTTTTCC+AGG - Chr2:19360826-19360845 MsG0280007695.01.T01:intron 25.0%
AAACACAATGATGATATCCT+TGG + Chr2:19361284-19361303 None:intergenic 30.0%
AACCAAACTTTGATCTGTTT+AGG + Chr2:19356366-19356385 None:intergenic 30.0%
AACCTAAACAGATCAAAGTT+TGG - Chr2:19356361-19356380 MsG0280007695.01.T01:CDS 30.0%
AATTACCTGTTGCATAATCT+TGG + Chr2:19360731-19360750 None:intergenic 30.0%
AATTTCATTGTTCAACAGCA+AGG + Chr2:19357902-19357921 None:intergenic 30.0%
ACTATGTGTCTACATACATA+TGG + Chr2:19361252-19361271 None:intergenic 30.0%
ACTGAGATATACTACAAGTT+TGG - Chr2:19358227-19358246 MsG0280007695.01.T01:CDS 30.0%
AGAACATTGGATTTACTTGA+AGG - Chr2:19360013-19360032 MsG0280007695.01.T01:intron 30.0%
AGATAGAGTGAGTTAGAATT+AGG + Chr2:19358957-19358976 None:intergenic 30.0%
AGTGATTCTCAAAGGTAAAT+TGG + Chr2:19360117-19360136 None:intergenic 30.0%
ATTAAGAACTTTCCATGCAA+TGG + Chr2:19360918-19360937 None:intergenic 30.0%
CTATGAATCGTCAAAAATCT+TGG - Chr2:19358624-19358643 MsG0280007695.01.T01:CDS 30.0%
GAAAATTAGTACAACTGTCT+TGG + Chr2:19361097-19361116 None:intergenic 30.0%
GAGCATTAGAATAGTTCAAA+AGG + Chr2:19361136-19361155 None:intergenic 30.0%
TAAATCCAATGTTCTTGATG+TGG + Chr2:19360008-19360027 None:intergenic 30.0%
TATACTACAAGTTTGGAAGA+TGG - Chr2:19358234-19358253 MsG0280007695.01.T01:CDS 30.0%
TATGTATGTAGACACATAGT+AGG - Chr2:19361252-19361271 MsG0280007695.01.T01:five_prime_UTR 30.0%
TGAAAATGATGAAGCTAGTT+TGG + Chr2:19356131-19356150 None:intergenic 30.0%
TGGTTTGAAAAGGTGAATAT+TGG + Chr2:19360604-19360623 None:intergenic 30.0%
TTCTTAAAGATAGACTGTCA+TGG - Chr2:19357976-19357995 MsG0280007695.01.T01:intron 30.0%
! AATATTCACCTTTTCAAACC+AGG - Chr2:19360603-19360622 MsG0280007695.01.T01:intron 30.0%
! ACTTTGAAGGAAATAACTTG+TGG - Chr2:19356644-19356663 MsG0280007695.01.T01:CDS 30.0%
! AGATTTTTGACGATTCATAG+AGG + Chr2:19358624-19358643 None:intergenic 30.0%
! ATTTTTGACGATTCATAGAG+GGG + Chr2:19358622-19358641 None:intergenic 30.0%
! CAGTCTATCTTTAAGAATCT+CGG + Chr2:19357973-19357992 None:intergenic 30.0%
! CTTTGAAGGAAATAACTTGT+GGG - Chr2:19356645-19356664 MsG0280007695.01.T01:CDS 30.0%
! GATTTTTGACGATTCATAGA+GGG + Chr2:19358623-19358642 None:intergenic 30.0%
! GTTTAGGTTCAATGTTAGAA+AGG + Chr2:19356350-19356369 None:intergenic 30.0%
! TTAACTGATTTAGGATCCAA+GGG + Chr2:19359876-19359895 None:intergenic 30.0%
! TTGTTGAACTTTTCTGACTT+CGG - Chr2:19358549-19358568 MsG0280007695.01.T01:intron 30.0%
! TTTGAAGGAAATAACTTGTG+GGG - Chr2:19356646-19356665 MsG0280007695.01.T01:intron 30.0%
! TTTGCTTGTTCGATTTTTGA+GGG - Chr2:19359305-19359324 MsG0280007695.01.T01:intron 30.0%
!! ATCACGTTGATTTAGATGTA+AGG - Chr2:19358489-19358508 MsG0280007695.01.T01:CDS 30.0%
!! ATCTCAACAAGTTGGTTATT+AGG + Chr2:19359243-19359262 None:intergenic 30.0%
!! TCACGTTGATTTAGATGTAA+GGG - Chr2:19358490-19358509 MsG0280007695.01.T01:CDS 30.0%
!! TCTGTGTTTACTTTTGTCTT+AGG - Chr2:19357944-19357963 MsG0280007695.01.T01:CDS 30.0%
AAAAATCGAACAAGCAAAGC+AGG + Chr2:19359303-19359322 None:intergenic 35.0%
AAAACCAGAAGGCAATAAGA+GGG + Chr2:19359844-19359863 None:intergenic 35.0%
AAAGGGGTTAATAACATCAC+TGG + Chr2:19356938-19356957 None:intergenic 35.0%
AAGAACTTTGTGGAGAATGA+TGG - Chr2:19356739-19356758 MsG0280007695.01.T01:intron 35.0%
AATAGAGCTTATGTACATGC+AGG - Chr2:19358058-19358077 MsG0280007695.01.T01:intron 35.0%
AGCACATAATTGCATCAGAA+TGG + Chr2:19360475-19360494 None:intergenic 35.0%
AGTGATGTTATTAACCCCTT+TGG - Chr2:19356937-19356956 MsG0280007695.01.T01:intron 35.0%
ATAGAAAATGGTGAGGTTGA+AGG + Chr2:19356054-19356073 None:intergenic 35.0%
ATGCATAAAGAAATGGATGC+TGG - Chr2:19356213-19356232 MsG0280007695.01.T01:three_prime_UTR 35.0%
CAACAAGTTTCATACACAGA+AGG + Chr2:19359733-19359752 None:intergenic 35.0%
CCACTCTCTTTCATAGAAAA+TGG + Chr2:19356066-19356085 None:intergenic 35.0%
CTAAAAGTTCTCAAAACAGC+TGG + Chr2:19358818-19358837 None:intergenic 35.0%
CTCTTTCATAGAAAATGGTG+AGG + Chr2:19356061-19356080 None:intergenic 35.0%
CTGCAAAGGATTCATCTATA+GGG + Chr2:19359815-19359834 None:intergenic 35.0%
GATAAAGTTCTTGATGAAGC+TGG - Chr2:19360679-19360698 MsG0280007695.01.T01:intron 35.0%
GGTTCAATGTTAGAAAGGAT+AGG + Chr2:19356345-19356364 None:intergenic 35.0%
TACTCAATACATCAACGCAT+CGG + Chr2:19358013-19358032 None:intergenic 35.0%
TAGCTTTCATGTTCATCAAC+TGG - Chr2:19360960-19360979 MsG0280007695.01.T01:CDS 35.0%
TCAGAAAGATCTCAACAAGT+TGG + Chr2:19359251-19359270 None:intergenic 35.0%
TCAGCTCTCACAAAATTTGA+CGG + Chr2:19358404-19358423 None:intergenic 35.0%
TCATCAATGTTCCCAACATT+TGG - Chr2:19359124-19359143 MsG0280007695.01.T01:intron 35.0%
TCTCATCTGGTGTATGAAAA+TGG - Chr2:19357173-19357192 MsG0280007695.01.T01:CDS 35.0%
TCTGCAAAGGATTCATCTAT+AGG + Chr2:19359816-19359835 None:intergenic 35.0%
TCTGCATTTAATGGTGAATG+TGG - Chr2:19357007-19357026 MsG0280007695.01.T01:CDS 35.0%
TGCAAAGGATTCATCTATAG+GGG + Chr2:19359814-19359833 None:intergenic 35.0%
TGGATGCTGGTAAATATGTA+AGG - Chr2:19356226-19356245 MsG0280007695.01.T01:three_prime_UTR 35.0%
TGGGAACATTGATGAATAGT+TGG + Chr2:19359119-19359138 None:intergenic 35.0%
TGTTGTCTTCTCAAAGAACT+AGG + Chr2:19356306-19356325 None:intergenic 35.0%
TTATTTGCGGTATGTTGCAT+TGG - Chr2:19359542-19359561 MsG0280007695.01.T01:intron 35.0%
TTTAATGTCTTTGTGTAGCC+TGG - Chr2:19357758-19357777 MsG0280007695.01.T01:intron 35.0%
! AAGTTTGGTTTCAAAACCGA+AGG - Chr2:19356376-19356395 MsG0280007695.01.T01:CDS 35.0%
! ACGTGATATGTATCTTTTGC+AGG - Chr2:19359629-19359648 MsG0280007695.01.T01:CDS 35.0%
! CATTTTAAACTCCACTTTGC+AGG - Chr2:19358724-19358743 MsG0280007695.01.T01:intron 35.0%
! CCATTTTCTATGAAAGAGAG+TGG - Chr2:19356063-19356082 MsG0280007695.01.T01:three_prime_UTR 35.0%
! CTTAACTGATTTAGGATCCA+AGG + Chr2:19359877-19359896 None:intergenic 35.0%
! CTTGACACCTTTCATTTTCA+GGG - Chr2:19358979-19358998 MsG0280007695.01.T01:intron 35.0%
! CTTTGCTTGTTCGATTTTTG+AGG - Chr2:19359304-19359323 MsG0280007695.01.T01:intron 35.0%
! TCGTCTCCAAACAAGTTTTT+GGG - Chr2:19359091-19359110 MsG0280007695.01.T01:intron 35.0%
! TTGAAGGAAATAACTTGTGG+GGG - Chr2:19356647-19356666 MsG0280007695.01.T01:intron 35.0%
! TTGACACCTTTCATTTTCAG+GGG - Chr2:19358980-19358999 MsG0280007695.01.T01:intron 35.0%
! TTTTCTATGAAAGAGAGTGG+AGG - Chr2:19356066-19356085 MsG0280007695.01.T01:three_prime_UTR 35.0%
!! TCAACAAGTTGGTTATTAGG+AGG + Chr2:19359240-19359259 None:intergenic 35.0%
!! TGTTTTCACTTTTGGTTGGT+TGG - Chr2:19356482-19356501 MsG0280007695.01.T01:intron 35.0%
AAACGGATACAACCTTAGGT+CGG - Chr2:19360075-19360094 MsG0280007695.01.T01:CDS 40.0%
AAGTTCTCAAAACAGCTGGT+TGG + Chr2:19358814-19358833 None:intergenic 40.0%
ACCATACTGAATTTCTCCAC+TGG + Chr2:19358783-19358802 None:intergenic 40.0%
AGAATCACAGCTATTGTCTG+TGG + Chr2:19357396-19357415 None:intergenic 40.0%
AGACAATAGCTGTGATTCTG+TGG - Chr2:19357397-19357416 MsG0280007695.01.T01:CDS 40.0%
AGATCGTTGAATGCTTCTAC+TGG - Chr2:19358359-19358378 MsG0280007695.01.T01:intron 40.0%
AGTGGAGAAATTCAGTATGG+TGG - Chr2:19358782-19358801 MsG0280007695.01.T01:CDS 40.0%
ATGGTTTCTCCATCAGACAA+AGG + Chr2:19360987-19361006 None:intergenic 40.0%
CAACTGTCTTGGATAGTATC+AGG + Chr2:19361086-19361105 None:intergenic 40.0%
CACATAGTAGGATGTAACCA+AGG - Chr2:19361264-19361283 MsG0280007695.01.T01:five_prime_UTR 40.0%
CATGAAAGCTAAGCAGTGAT+TGG + Chr2:19360951-19360970 None:intergenic 40.0%
CTCACAAAATTTGACGGAGA+AGG + Chr2:19358398-19358417 None:intergenic 40.0%
CTTCCTTTCTTTGCTTCTCA+CGG + Chr2:19357067-19357086 None:intergenic 40.0%
CTTCTCAAAGAACTAGGCTT+AGG + Chr2:19356300-19356319 None:intergenic 40.0%
GAAAACCAGAAGGCAATAAG+AGG + Chr2:19359845-19359864 None:intergenic 40.0%
GATGGAACAAGAAACAGTGA+AGG + Chr2:19355982-19356001 None:intergenic 40.0%
GATGGATATCTAGAAGCTAC+AGG - Chr2:19360290-19360309 MsG0280007695.01.T01:intron 40.0%
GCAACGATACCAATAGATTC+CGG + Chr2:19357785-19357804 None:intergenic 40.0%
GGAATAACTCGAAAACCAGA+AGG + Chr2:19359855-19359874 None:intergenic 40.0%
GGTCTAATAAGGAAACCACT+AGG + Chr2:19358434-19358453 None:intergenic 40.0%
GTAGAGAGAAAAGAGAGAGA+AGG + Chr2:19356024-19356043 None:intergenic 40.0%
GTTCAAACGGATACAACCTT+AGG - Chr2:19360071-19360090 MsG0280007695.01.T01:CDS 40.0%
GTTCTCCAAGATTATGCAAC+AGG - Chr2:19360723-19360742 MsG0280007695.01.T01:intron 40.0%
TCAATGTTCCCAACATTTGG+AGG - Chr2:19359127-19359146 MsG0280007695.01.T01:intron 40.0%
TCCAACCACATCAAGAACAT+TGG - Chr2:19360000-19360019 MsG0280007695.01.T01:intron 40.0%
TCCAATGTTCTTGATGTGGT+TGG + Chr2:19360004-19360023 None:intergenic 40.0%
TCCAGTGGAGAAATTCAGTA+TGG - Chr2:19358779-19358798 MsG0280007695.01.T01:CDS 40.0%
TGCAATGAACAAGCTCTTGA+TGG - Chr2:19357121-19357140 MsG0280007695.01.T01:CDS 40.0%
TGTATTGAATTCTGCATCGC+AGG - Chr2:19359973-19359992 MsG0280007695.01.T01:intron 40.0%
TTCATTGTTCAACAGCAAGG+AGG + Chr2:19357899-19357918 None:intergenic 40.0%
TTCCTTATTAGACCTTGCGA+GGG - Chr2:19358440-19358459 MsG0280007695.01.T01:CDS 40.0%
TTGAACCCCCTGAAAATGAA+AGG + Chr2:19358989-19359008 None:intergenic 40.0%
TTTCCTTATTAGACCTTGCG+AGG - Chr2:19358439-19358458 MsG0280007695.01.T01:CDS 40.0%
TTTGGAAGATGGAAGTCTTG+TGG - Chr2:19358245-19358264 MsG0280007695.01.T01:intron 40.0%
! AGAAAAGAGAGAGAAGGTGT+TGG + Chr2:19356018-19356037 None:intergenic 40.0%
! CCTTGACACCTTTCATTTTC+AGG - Chr2:19358978-19358997 MsG0280007695.01.T01:intron 40.0%
! CGTCTCCAAACAAGTTTTTG+GGG - Chr2:19359092-19359111 MsG0280007695.01.T01:intron 40.0%
! CTCGTCTCCAAACAAGTTTT+TGG - Chr2:19359090-19359109 MsG0280007695.01.T01:intron 40.0%
! CTTTTAGTCAGAGACTTTGC+AGG - Chr2:19358831-19358850 MsG0280007695.01.T01:CDS 40.0%
! GGACTCAACTCTAAAAAGCT+CGG + Chr2:19360417-19360436 None:intergenic 40.0%
! GTATTGAGTATTGTTCCCAC+TGG - Chr2:19358023-19358042 MsG0280007695.01.T01:intron 40.0%
! GTGAATGGATTTGTCGATGA+CGG - Chr2:19359016-19359035 MsG0280007695.01.T01:CDS 40.0%
! TCCAAAGCTTCAACTTGTTC+AGG + Chr2:19356258-19356277 None:intergenic 40.0%
! TCCTGAACAAGTTGAAGCTT+TGG - Chr2:19356254-19356273 MsG0280007695.01.T01:exon 40.0%
! TGAAGGAAATAACTTGTGGG+GGG - Chr2:19356648-19356667 MsG0280007695.01.T01:intron 40.0%
! TGTGATTCTGTGGTAATGAG+TGG - Chr2:19357407-19357426 MsG0280007695.01.T01:CDS 40.0%
! TTGGACCCCAAAAACTTGTT+TGG + Chr2:19359100-19359119 None:intergenic 40.0%
!! CCTGAAAATGAAAGGTGTCA+AGG + Chr2:19358981-19359000 None:intergenic 40.0%
!! TGACACCTTTCATTTTCAGG+GGG - Chr2:19358981-19359000 MsG0280007695.01.T01:intron 40.0%
!!! TGGTTTTCGAGTTATTCCCT+TGG - Chr2:19359857-19359876 MsG0280007695.01.T01:CDS 40.0%
AAGACACCACCTCCAAATGT+TGG + Chr2:19359139-19359158 None:intergenic 45.0%
AAGTTCTTGATGAAGCTGGC+AGG - Chr2:19360683-19360702 MsG0280007695.01.T01:intron 45.0%
AATCGAACAAGCAAAGCAGG+AGG + Chr2:19359300-19359319 None:intergenic 45.0%
AGACACCACCTCCAAATGTT+GGG + Chr2:19359138-19359157 None:intergenic 45.0%
AGAGCTGAAATGCTTCCTAG+TGG - Chr2:19358416-19358435 MsG0280007695.01.T01:CDS 45.0%
AGTCAGAGACTTTGCAGGTA+GGG - Chr2:19358836-19358855 MsG0280007695.01.T01:CDS 45.0%
ATACCAATAGATTCCGGACC+AGG + Chr2:19357779-19357798 None:intergenic 45.0%
ATGCCGTGAGAAGCAAAGAA+AGG - Chr2:19357061-19357080 MsG0280007695.01.T01:CDS 45.0%
ATGTTCCCAACATTTGGAGG+TGG - Chr2:19359130-19359149 MsG0280007695.01.T01:intron 45.0%
CAATATTGCATCACTCGCTG+CGG + Chr2:19360438-19360457 None:intergenic 45.0%
CAATTGTAAGGACCGACCTA+AGG + Chr2:19360090-19360109 None:intergenic 45.0%
CACGTTTACAGACGGTGAAT+AGG - Chr2:19357090-19357109 MsG0280007695.01.T01:CDS 45.0%
CAGATAGCACAAGAATCCAG+TGG - Chr2:19358764-19358783 MsG0280007695.01.T01:CDS 45.0%
CTGGAGGTAGTTCGTATAGA+GGG - Chr2:19359573-19359592 MsG0280007695.01.T01:intron 45.0%
CTTAGATAGGAACTCTGCCA+GGG + Chr2:19357618-19357637 None:intergenic 45.0%
CTTATGAGCAAGCCATTGCA+TGG - Chr2:19360903-19360922 MsG0280007695.01.T01:CDS 45.0%
CTTGAGACAAGTAGCAGAGT+AGG + Chr2:19359367-19359386 None:intergenic 45.0%
CTTGATACACAAATCCCTCC+TGG + Chr2:19360866-19360885 None:intergenic 45.0%
GAAAATGGTGAGGTTGAAGG+TGG + Chr2:19356051-19356070 None:intergenic 45.0%
GAGAAATTCAGTATGGTGGC+GGG - Chr2:19358786-19358805 MsG0280007695.01.T01:CDS 45.0%
GAGCAAGAGGTAAAATGACC+TGG + Chr2:19359440-19359459 None:intergenic 45.0%
GCAGAAGCAAGTTTCTCATC+TGG - Chr2:19357160-19357179 MsG0280007695.01.T01:CDS 45.0%
GGAAGCTTCACGTTTACAGA+CGG - Chr2:19357082-19357101 MsG0280007695.01.T01:CDS 45.0%
GGAGAAATTCAGTATGGTGG+CGG - Chr2:19358785-19358804 MsG0280007695.01.T01:CDS 45.0%
GGGTTCAATGATGCTGTGAA+TGG - Chr2:19359001-19359020 MsG0280007695.01.T01:CDS 45.0%
GTTCTTCTTCTTCACTCTGC+AGG + Chr2:19356109-19356128 None:intergenic 45.0%
TAGTCAGAGACTTTGCAGGT+AGG - Chr2:19358835-19358854 MsG0280007695.01.T01:CDS 45.0%
TCAACTGGTCCTTTGTCTGA+TGG - Chr2:19360975-19360994 MsG0280007695.01.T01:CDS 45.0%
TCCTTATTAGACCTTGCGAG+GGG - Chr2:19358441-19358460 MsG0280007695.01.T01:CDS 45.0%
TCGTTGAATGCTTCTACTGG+TGG - Chr2:19358362-19358381 MsG0280007695.01.T01:intron 45.0%
TCTAGTAATGCTCGTCCATC+TGG - Chr2:19360037-19360056 MsG0280007695.01.T01:intron 45.0%
TGTTGTGGCATCAGTTCAGA+GGG - Chr2:19360180-19360199 MsG0280007695.01.T01:intron 45.0%
TTGAATCGTGGCAGCATGTT+AGG + Chr2:19358863-19358882 None:intergenic 45.0%
TTGAATTCTGCATCGCAGGA+CGG - Chr2:19359977-19359996 MsG0280007695.01.T01:intron 45.0%
! ATGGATTTGTCGATGACGGT+TGG - Chr2:19359020-19359039 MsG0280007695.01.T01:CDS 45.0%
! GAGAAACTTGCTTCTGCAGA+CGG + Chr2:19357157-19357176 None:intergenic 45.0%
! GAGTTCCTATCTAAGGCTAC+CGG - Chr2:19357623-19357642 MsG0280007695.01.T01:CDS 45.0%
! TAGTCCAGCCTGGTTTGAAA+AGG + Chr2:19360614-19360633 None:intergenic 45.0%
! TTCACCTTTTCAAACCAGGC+TGG - Chr2:19360607-19360626 MsG0280007695.01.T01:intron 45.0%
! TTGAGTATTGTTCCCACTGG+TGG - Chr2:19358026-19358045 MsG0280007695.01.T01:intron 45.0%
!! AAAGGTGTTACTAACCCAGC+TGG + Chr2:19357485-19357504 None:intergenic 45.0%
!! AACTTGTTGCAGCTTTGCAG+TGG - Chr2:19359744-19359763 MsG0280007695.01.T01:intron 45.0%
!! AAGGTGTTACTAACCCAGCT+GGG + Chr2:19357484-19357503 None:intergenic 45.0%
!! AATAACTTGTGGGGGGTGTT+TGG - Chr2:19356655-19356674 MsG0280007695.01.T01:intron 45.0%
!! ATGGCTTGCTCATAAGACAC+TGG + Chr2:19360899-19360918 None:intergenic 45.0%
!! CGATCAGAATGGGCTGATTA+TGG - Chr2:19359333-19359352 MsG0280007695.01.T01:intron 45.0%
!! TAAGAGGGCATCATCTGCAA+AGG + Chr2:19359829-19359848 None:intergenic 45.0%
!! TTCTATTAGTCTTCTCGCCG+TGG - Chr2:19357583-19357602 MsG0280007695.01.T01:intron 45.0%
!!! GTCTTTTTCAGGATGCACAC+TGG - Chr2:19360389-19360408 MsG0280007695.01.T01:intron 45.0%
!! ATTTATTTATAGATAAATAT+TGG - Chr2:19356817-19356836 MsG0280007695.01.T01:CDS 5.0%
AAGCTCATGCTTTGGCACGA+TGG - Chr2:19360272-19360291 MsG0280007695.01.T01:intron 50.0%
AATGCTCGTCCATCTGGTGA+AGG - Chr2:19360043-19360062 MsG0280007695.01.T01:CDS 50.0%
AGGTAAAATGACCTGGCTGC+TGG + Chr2:19359433-19359452 None:intergenic 50.0%
AGTATTGTTCCCACTGGTGG+TGG - Chr2:19358029-19358048 MsG0280007695.01.T01:intron 50.0%
ATCAGTTCAGAGGGTTGCCA+TGG - Chr2:19360189-19360208 MsG0280007695.01.T01:intron 50.0%
ATTGTACCACCACCACCAGT+GGG + Chr2:19358041-19358060 None:intergenic 50.0%
CATGCTGCCACGATTCAATG+CGG - Chr2:19358865-19358884 MsG0280007695.01.T01:CDS 50.0%
CCAAATGCCGCATTGAATCG+TGG + Chr2:19358875-19358894 None:intergenic 50.0%
CCACAACACTACGCACATAC+TGG + Chr2:19360168-19360187 None:intergenic 50.0%
CCACGATTCAATGCGGCATT+TGG - Chr2:19358872-19358891 MsG0280007695.01.T01:CDS 50.0%
CCAGTATGTGCGTAGTGTTG+TGG - Chr2:19360165-19360184 MsG0280007695.01.T01:CDS 50.0%
CCTCTATACGAACTACCTCC+AGG + Chr2:19359575-19359594 None:intergenic 50.0%
CCTGGAGGTAGTTCGTATAG+AGG - Chr2:19359572-19359591 MsG0280007695.01.T01:intron 50.0%
CCTGGCAGAGTTCCTATCTA+AGG - Chr2:19357616-19357635 MsG0280007695.01.T01:CDS 50.0%
CCTTAGATAGGAACTCTGCC+AGG + Chr2:19357619-19357638 None:intergenic 50.0%
CCTTATTAGACCTTGCGAGG+GGG - Chr2:19358442-19358461 MsG0280007695.01.T01:CDS 50.0%
CTGTTTCCCGCAACTCTAGT+GGG - Chr2:19357804-19357823 MsG0280007695.01.T01:CDS 50.0%
CTTATTAGACCTTGCGAGGG+GGG - Chr2:19358443-19358462 MsG0280007695.01.T01:CDS 50.0%
CTTGGACACGGAACTGCATA+GGG + Chr2:19359396-19359415 None:intergenic 50.0%
GAATCACTTGCGCGACAATG+TGG - Chr2:19360129-19360148 MsG0280007695.01.T01:CDS 50.0%
GACGTATGCGCCTACAACTT+TGG - Chr2:19358182-19358201 MsG0280007695.01.T01:CDS 50.0%
GATGCCCTCTTATTGCCTTC+TGG - Chr2:19359837-19359856 MsG0280007695.01.T01:CDS 50.0%
GGGTTGTTTGCATCCCTTTG+AGG + Chr2:19357464-19357483 None:intergenic 50.0%
GGTAAAATGACCTGGCTGCT+GGG + Chr2:19359432-19359451 None:intergenic 50.0%
GGTGCAGATGATTGGGATGA+AGG - Chr2:19357661-19357680 MsG0280007695.01.T01:CDS 50.0%
GTCGCGCAAGTGATTCTCAA+AGG + Chr2:19360125-19360144 None:intergenic 50.0%
GTGCCAGTGCAACATCTTCT+GGG + Chr2:19359611-19359630 None:intergenic 50.0%
GTGTTGCAATGCCTGCAAAG+TGG + Chr2:19358738-19358757 None:intergenic 50.0%
GTGTTGTGGCATCAGTTCAG+AGG - Chr2:19360179-19360198 MsG0280007695.01.T01:CDS 50.0%
GTTATGCATCTCTGCCAGGA+GGG - Chr2:19360849-19360868 MsG0280007695.01.T01:intron 50.0%
TAGCCTGGTCCGGAATCTAT+TGG - Chr2:19357773-19357792 MsG0280007695.01.T01:intron 50.0%
TATTGTACCACCACCACCAG+TGG + Chr2:19358042-19358061 None:intergenic 50.0%
TCGACTGGGTGCAGATGATT+GGG - Chr2:19357654-19357673 MsG0280007695.01.T01:CDS 50.0%
TCTTGGACACGGAACTGCAT+AGG + Chr2:19359397-19359416 None:intergenic 50.0%
TGCCAGTGCAACATCTTCTG+GGG + Chr2:19359610-19359629 None:intergenic 50.0%
TGGTCGTTGCTGGGAAATGA+TGG - Chr2:19359040-19359059 MsG0280007695.01.T01:CDS 50.0%
TGGTGAGGTTGAAGGTGGTA+AGG + Chr2:19356046-19356065 None:intergenic 50.0%
TGTCTTTGTGTAGCCTGGTC+CGG - Chr2:19357763-19357782 MsG0280007695.01.T01:intron 50.0%
TTCGCCAGAAGCTCATGCTT+TGG - Chr2:19360264-19360283 MsG0280007695.01.T01:intron 50.0%
TTGGACACGGAACTGCATAG+GGG + Chr2:19359395-19359414 None:intergenic 50.0%
! CAAGGCATCAATGCTACTGC+AGG - Chr2:19359165-19359184 MsG0280007695.01.T01:intron 50.0%
! CAGTTCCGGTAGCCTTAGAT+AGG + Chr2:19357631-19357650 None:intergenic 50.0%
! TGTGAGTCTAGAGCCCACTA+AGG - Chr2:19357850-19357869 MsG0280007695.01.T01:CDS 50.0%
! TGTTGCATTGGTGCAGTTCC+TGG - Chr2:19359554-19359573 MsG0280007695.01.T01:intron 50.0%
!! AAGGTGTTGGCAGAGAGAGA+TGG + Chr2:19356005-19356024 None:intergenic 50.0%
!! AGGTGTTGGCAGAGAGAGAT+GGG + Chr2:19356004-19356023 None:intergenic 50.0%
!! CTGCAGTAGCATTGATGCCT+TGG + Chr2:19359167-19359186 None:intergenic 50.0%
!! GAGGGAGCATCGATCAGAAT+GGG - Chr2:19359323-19359342 MsG0280007695.01.T01:intron 50.0%
!! GCTGAGTTGGGTTTTGCTGT+TGG + Chr2:19357439-19357458 None:intergenic 50.0%
!! GGTGAAGGTGCTGGTTCAAA+CGG - Chr2:19360058-19360077 MsG0280007695.01.T01:CDS 50.0%
!! TAGTGGGCTCTAGACTCACA+AGG + Chr2:19357850-19357869 None:intergenic 50.0%
!! TGAGGGAGCATCGATCAGAA+TGG - Chr2:19359322-19359341 MsG0280007695.01.T01:intron 50.0%
ACCCAACTCAGCGTCCTCAA+AGG - Chr2:19357447-19357466 MsG0280007695.01.T01:CDS 55.0%
ACCTCTTCGTGCTCGATCGT+AGG + Chr2:19359462-19359481 None:intergenic 55.0%
AGAGGGGCCTCAGAACTTCA+GGG + Chr2:19358606-19358625 None:intergenic 55.0%
AGGGATGCAAACAACCCAGC+TGG - Chr2:19357467-19357486 MsG0280007695.01.T01:CDS 55.0%
AGGTGGTGTCTTGTGTGCCA+AGG - Chr2:19359147-19359166 MsG0280007695.01.T01:intron 55.0%
CAAGCATGTCTAGTCCAGCC+TGG + Chr2:19360624-19360643 None:intergenic 55.0%
CAGGGTTATGCATCTCTGCC+AGG - Chr2:19360845-19360864 MsG0280007695.01.T01:intron 55.0%
CCCAACTCAGCGTCCTCAAA+GGG - Chr2:19357448-19357467 MsG0280007695.01.T01:CDS 55.0%
CCCCCTCGCAAGGTCTAATA+AGG + Chr2:19358445-19358464 None:intergenic 55.0%
CCGCAACTCTAGTGGGATAG+CGG - Chr2:19357811-19357830 MsG0280007695.01.T01:CDS 55.0%
CCGCTATCCCACTAGAGTTG+CGG + Chr2:19357814-19357833 None:intergenic 55.0%
CGCTATCCCACTAGAGTTGC+GGG + Chr2:19357813-19357832 None:intergenic 55.0%
CGTGCCAAAGCATGAGCTTC+TGG + Chr2:19360271-19360290 None:intergenic 55.0%
CGTGCCAGTGCAACATCTTC+TGG + Chr2:19359612-19359631 None:intergenic 55.0%
CGTGCTGCAGCCAAAGTTGT+AGG + Chr2:19358195-19358214 None:intergenic 55.0%
CTCCCCAGAAGATGTTGCAC+TGG - Chr2:19359605-19359624 MsG0280007695.01.T01:CDS 55.0%
CTGGCAGAGATGCATAACCC+TGG + Chr2:19360847-19360866 None:intergenic 55.0%
CTTCTACTGGTGGCCCTACA+GGG - Chr2:19358372-19358391 MsG0280007695.01.T01:intron 55.0%
CTTGGGCCAAAGTCTCTTCC+TGG - Chr2:19360241-19360260 MsG0280007695.01.T01:intron 55.0%
GAAAGAGAGTGGAGGCTCTC+TGG - Chr2:19356074-19356093 MsG0280007695.01.T01:three_prime_UTR 55.0%
GAACCAGCACCTTCACCAGA+TGG + Chr2:19360055-19360074 None:intergenic 55.0%
GGCGAACCAGGAAGAGACTT+TGG + Chr2:19360250-19360269 None:intergenic 55.0%
GGGATGCAAACAACCCAGCT+GGG - Chr2:19357468-19357487 MsG0280007695.01.T01:CDS 55.0%
GGTTATGCATCTCTGCCAGG+AGG - Chr2:19360848-19360867 MsG0280007695.01.T01:intron 55.0%
GTCGACTGGGTGCAGATGAT+TGG - Chr2:19357653-19357672 MsG0280007695.01.T01:CDS 55.0%
GTTGGCAGAGAGAGATGGGA+TGG + Chr2:19356000-19356019 None:intergenic 55.0%
TAGAGGGGCCTCAGAACTTC+AGG + Chr2:19358607-19358626 None:intergenic 55.0%
TCCTACGATCGAGCACGAAG+AGG - Chr2:19359458-19359477 MsG0280007695.01.T01:CDS 55.0%
TGCTCGATCGTAGGAGCAAG+AGG + Chr2:19359453-19359472 None:intergenic 55.0%
TTGACGGAGAAGGCCCTGTA+GGG + Chr2:19358388-19358407 None:intergenic 55.0%
TTTGACGGAGAAGGCCCTGT+AGG + Chr2:19358389-19358408 None:intergenic 55.0%
TTTGGCCCAAGCTGAGTACC+TGG + Chr2:19360232-19360251 None:intergenic 55.0%
! CCCTTTGAGGACGCTGAGTT+GGG + Chr2:19357451-19357470 None:intergenic 55.0%
! GATGACGGTTGGTCGTTGCT+GGG - Chr2:19359031-19359050 MsG0280007695.01.T01:CDS 55.0%
! GCTGTTTCCCGCAACTCTAG+TGG - Chr2:19357803-19357822 MsG0280007695.01.T01:CDS 55.0%
! GGAGTGTCCCTGAAGTTCTG+AGG - Chr2:19358596-19358615 MsG0280007695.01.T01:CDS 55.0%
! TACCGGAACTGCTGTCGACT+GGG - Chr2:19357640-19357659 MsG0280007695.01.T01:CDS 55.0%
! TCCCTTTGAGGACGCTGAGT+TGG + Chr2:19357452-19357471 None:intergenic 55.0%
! TGCATTGGTGCAGTTCCTGG+AGG - Chr2:19359557-19359576 MsG0280007695.01.T01:intron 55.0%
! TGGCTGCAGCACGAGACTTT+TGG - Chr2:19358202-19358221 MsG0280007695.01.T01:CDS 55.0%
!! ATTGTTCCCACTGGTGGTGG+TGG - Chr2:19358032-19358051 MsG0280007695.01.T01:intron 55.0%
AAGCCACCGGGTCTTGGACA+CGG + Chr2:19359408-19359427 None:intergenic 60.0%
AAGCTGAGTACCTGGCCGAG+AGG + Chr2:19360224-19360243 None:intergenic 60.0%
ACGCACATACTGGCGAGCCA+TGG + Chr2:19360158-19360177 None:intergenic 60.0%
AGCTGAGTACCTGGCCGAGA+GGG + Chr2:19360223-19360242 None:intergenic 60.0%
ATTAGACCTTGCGAGGGGGG+CGG - Chr2:19358446-19358465 MsG0280007695.01.T01:CDS 60.0%
CACCCAGTCGACAGCAGTTC+CGG + Chr2:19357645-19357664 None:intergenic 60.0%
CCATGGCAATTGCGCCCTCT+CGG - Chr2:19360206-19360225 MsG0280007695.01.T01:intron 60.0%
CTACCGGAACTGCTGTCGAC+TGG - Chr2:19357639-19357658 MsG0280007695.01.T01:CDS 60.0%
CTCGGCCAGGTACTCAGCTT+GGG - Chr2:19360224-19360243 MsG0280007695.01.T01:intron 60.0%
CTCTAGACTCACAAGGCCGC+AGG + Chr2:19357843-19357862 None:intergenic 60.0%
GCAGTTCCGTGTCCAAGACC+CGG - Chr2:19359399-19359418 MsG0280007695.01.T01:CDS 60.0%
GCATGAGCTTCTGGCGAACC+AGG + Chr2:19360262-19360281 None:intergenic 60.0%
GCGCGACAATGTGGCTTCCA+TGG - Chr2:19360138-19360157 MsG0280007695.01.T01:CDS 60.0%
GCTTCTACTGGTGGCCCTAC+AGG - Chr2:19358371-19358390 MsG0280007695.01.T01:intron 60.0%
TAGTCTTCTCGCCGTGGCTG+AGG - Chr2:19357589-19357608 MsG0280007695.01.T01:intron 60.0%
TCTCGGCCAGGTACTCAGCT+TGG - Chr2:19360223-19360242 MsG0280007695.01.T01:intron 60.0%
! CGATGACGGTTGGTCGTTGC+TGG - Chr2:19359030-19359049 MsG0280007695.01.T01:CDS 60.0%
! CGTCCATCTGGTGAAGGTGC+TGG - Chr2:19360049-19360068 MsG0280007695.01.T01:CDS 60.0%
CTGGCTGCTGGGAAAGCCAC+CGG + Chr2:19359421-19359440 None:intergenic 65.0%
CTGGGAAAGCCACCGGGTCT+TGG + Chr2:19359414-19359433 None:intergenic 65.0%
GTTCCGTGTCCAAGACCCGG+TGG - Chr2:19359402-19359421 MsG0280007695.01.T01:CDS 65.0%
TGCCAGGGTCTCCTCAGCCA+CGG + Chr2:19357603-19357622 None:intergenic 65.0%
TGGCTGCTGGGAAAGCCACC+GGG + Chr2:19359420-19359439 None:intergenic 65.0%
! CCGAGAGGGCGCAATTGCCA+TGG + Chr2:19360209-19360228 None:intergenic 65.0%
ATGGATCCGCCCCCCTCGCA+AGG + Chr2:19358455-19358474 None:intergenic 70.0%
CGGTGGCTTTCCCAGCAGCC+AGG - Chr2:19359419-19359438 MsG0280007695.01.T01:CDS 70.0%
GCAATTGCGCCCTCTCGGCC+AGG - Chr2:19360211-19360230 MsG0280007695.01.T01:intron 70.0%
CGCCGTGGCTGAGGAGACCC+TGG - Chr2:19357598-19357617 MsG0280007695.01.T01:intron 75.0%
! GGGATAGCGGCGCGAGCCTG+CGG - Chr2:19357824-19357843 MsG0280007695.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 19355940 19361319 19355940 ID=MsG0280007695.01;Name=MsG0280007695.01
Chr2 mRNA 19355940 19361319 19355940 ID=MsG0280007695.01.T01;Parent=MsG0280007695.01;Name=MsG0280007695.01.T01;_AED=0.22;_eAED=0.22;_QI=261|0.94|0.94|1|1|1|18|325|832
Chr2 exon 19355940 19356411 19355940 ID=MsG0280007695.01.T01:exon:4463;Parent=MsG0280007695.01.T01
Chr2 exon 19356515 19356664 19356515 ID=MsG0280007695.01.T01:exon:4462;Parent=MsG0280007695.01.T01
Chr2 exon 19356760 19356859 19356760 ID=MsG0280007695.01.T01:exon:4461;Parent=MsG0280007695.01.T01
Chr2 exon 19356948 19357264 19356948 ID=MsG0280007695.01.T01:exon:4460;Parent=MsG0280007695.01.T01
Chr2 exon 19357369 19357503 19357369 ID=MsG0280007695.01.T01:exon:4459;Parent=MsG0280007695.01.T01
Chr2 exon 19357609 19357689 19357609 ID=MsG0280007695.01.T01:exon:4458;Parent=MsG0280007695.01.T01
Chr2 exon 19357780 19357968 19357780 ID=MsG0280007695.01.T01:exon:4457;Parent=MsG0280007695.01.T01
Chr2 exon 19358073 19358259 19358073 ID=MsG0280007695.01.T01:exon:4456;Parent=MsG0280007695.01.T01
Chr2 exon 19358407 19358513 19358407 ID=MsG0280007695.01.T01:exon:4455;Parent=MsG0280007695.01.T01
Chr2 exon 19358593 19358667 19358593 ID=MsG0280007695.01.T01:exon:4454;Parent=MsG0280007695.01.T01
Chr2 exon 19358754 19358909 19358754 ID=MsG0280007695.01.T01:exon:4453;Parent=MsG0280007695.01.T01
Chr2 exon 19358993 19359076 19358993 ID=MsG0280007695.01.T01:exon:4452;Parent=MsG0280007695.01.T01
Chr2 exon 19359180 19359293 19359180 ID=MsG0280007695.01.T01:exon:4451;Parent=MsG0280007695.01.T01
Chr2 exon 19359388 19359483 19359388 ID=MsG0280007695.01.T01:exon:4450;Parent=MsG0280007695.01.T01
Chr2 exon 19359577 19359667 19359577 ID=MsG0280007695.01.T01:exon:4449;Parent=MsG0280007695.01.T01
Chr2 exon 19359770 19359882 19359770 ID=MsG0280007695.01.T01:exon:4448;Parent=MsG0280007695.01.T01
Chr2 exon 19360039 19360198 19360039 ID=MsG0280007695.01.T01:exon:4447;Parent=MsG0280007695.01.T01
Chr2 exon 19360862 19361319 19360862 ID=MsG0280007695.01.T01:exon:4446;Parent=MsG0280007695.01.T01
Chr2 five_prime_UTR 19361059 19361319 19361059 ID=MsG0280007695.01.T01:five_prime_utr;Parent=MsG0280007695.01.T01
Chr2 CDS 19360862 19361058 19360862 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19360039 19360198 19360039 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19359770 19359882 19359770 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19359577 19359667 19359577 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19359388 19359483 19359388 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19359180 19359293 19359180 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19358993 19359076 19358993 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19358754 19358909 19358754 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19358593 19358667 19358593 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19358407 19358513 19358407 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19358073 19358259 19358073 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19357780 19357968 19357780 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19357609 19357689 19357609 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19357369 19357503 19357369 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19356948 19357264 19356948 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19356760 19356859 19356760 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19356515 19356664 19356515 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 CDS 19356265 19356411 19356265 ID=MsG0280007695.01.T01:cds;Parent=MsG0280007695.01.T01
Chr2 three_prime_UTR 19355940 19356264 19355940 ID=MsG0280007695.01.T01:three_prime_utr;Parent=MsG0280007695.01.T01
Gene Sequence

>MsG0280007695.01.T01

ATGGCACTTTCTATGCATAAAGAAATGGATGCTGGTAAATATGTAAGGTACACTCCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTCATTAGAGAATGTCCTATCCTTTCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAACCGAAGATGCCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTACAGACGGTGAATAGGAAGTTGTCTGCAATGAACAAGCTCTTGATGGAAGAGAATGACCGTCTGCAGAAGCAAGTTTCTCATCTGGTGTATGAAAATGGATACATGAAGCAACAGATTCATACTGCTTCTGCTGCAACTACCACAGACAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCGTCCTCAAAGGGATGCAAACAACCCAGCTGGTCTTCTCGCCGTGGCTGAGGAGACCCTGGCAGAGTTCCTATCTAAGGCTACCGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGAATCTATTGGTATCGTTGCTGTTTCCCGCAACTCTAGTGGGATAGCGGCGCGAGCCTGCGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATAGACTGTCATGGTATCGTGACTGCCGATGCGTTGATGTATTGAGTATTGTTCCCACTGGTGGTGGTGGTACAATAGAGCTTATGTACATGCAGACGTATGCGCCTACAACTTTGGCTGCAGCACGAGACTTTTGGACACTGAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCGTTGAATGCTTCTACTGGTGGCCCTACAGGGCCTTCTCCGTCAAATTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTCCTTATTAGACCTTGCGAGGGGGGCGGATCCATTATTCATATTGTTGATCACGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCCCTCTATGAATCGTCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCATTGCAACACATAAAACAGATAGCACAAGAATCCAGTGGAGAAATTCAGTATGGTGGCGGGCGCCAACCAGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTCGATGACGGTTGGTCGTTGCTGGGAAATGATGGTGTTGAAGACGTAACAATTGCTGTAAACTCGTCTCCAAACAAGTTTTTGGGGTCCAACTATTCATCAATGTTCCCAACATTTGGAGGTGGTGTCTTGTGTGCCAAGGCATCAATGCTACTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAATGGGCTGATTATGGCGTTGATGCCTACTCTGCTACTTGTCTCAAGTCTAGCCCCTATGCAGTTCCGTGTCCAAGACCCGGTGGCTTTCCCAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCACGAAGAGTTCCTGGAGGTAGTTCGTATAGAGGGACATGCATTCTCCCCAGAAGATGTTGCACTGGCACGTGATATGTATCTTTTGCAGCTTTGCAGTGGAATTGATGAAAATTCAATTGGAGCATGTGCTCAACTTGTGTTTGCCCCTATAGATGAATCCTTTGCAGATGATGCCCTCTTATTGCCTTCTGGTTTTCGAGTTATTCCCTTGGATCCTAAATCAGACGGTCCAACCACATCAAGAACATTGGATTTACTTGAAGGATCTAGTAATGCTCGTCCATCTGGTGAAGGTGCTGGTTCAAACGGATACAACCTTAGGTCGGTCCTTACAATTGCATTCCAATTTACCTTTGAGAATCACTTGCGCGACAATGTGGCTTCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGCATCAGTTCAGAGGGTTGCCATGGCAATTGCGCCCTCTCGGCCAGGTACTCAGCTTGGGCCAAAGTCTCTTCCTGGTTCGCCAGAAGCTCATGCTTTGGCACGATGGATATCTAGAAGCTACAGGATGCACACTGGTGCCGAGCTTTTTAGAGTTGAGTCCGCAGCGAGTGATGCAATATTGAAACAACTTTGGCACCATTCTGATGCAATTATGTGCTGTTCTGCATCTCCAATATTCACCTTTTCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATTATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGGTTATGCATCTCTGCCAGGAGGGATTTGTGTATCAAGTATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTTAATGATGATGATGCCAATCACTGCTTAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA

Protein sequence

>MsG0280007695.01.T01

MALSMHKEMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAATTTDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPTGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDENSIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPTTSRTLDLLEGSSNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV*