AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037052.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037052.01.T01 MTR_7g026230 100.000 377 0 0 1 377 1 377 0.0 784
MsG0780037052.01.T01 MTR_6g004000 97.082 377 11 0 1 377 1 377 0.0 769
MsG0780037052.01.T01 MTR_0015s0130 97.613 377 9 0 1 377 1 377 0.0 768
MsG0780037052.01.T01 MTR_2g096840 97.082 377 11 0 1 377 1 377 0.0 768
MsG0780037052.01.T01 MTR_3g095530 96.021 377 15 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 MTR_7g093260 96.021 377 15 0 1 377 1 377 0.0 761
MsG0780037052.01.T01 MTR_2g008050 93.899 377 23 0 1 377 1 377 0.0 751
MsG0780037052.01.T01 MTR_7g027185 43.272 379 201 3 10 374 7 385 3.11e-120 353
MsG0780037052.01.T01 MTR_7g027185 44.507 355 184 2 10 351 7 361 1.17e-117 346
MsG0780037052.01.T01 MTR_7g027185 47.557 307 159 1 10 314 7 313 5.91e-110 324
MsG0780037052.01.T01 MTR_5g066400 37.360 447 206 12 1 376 1 444 1.26e-90 280
MsG0780037052.01.T01 MTR_8g464900 36.574 432 201 11 1 362 1 429 4.15e-84 262
MsG0780037052.01.T01 MTR_5g066400 34.753 446 191 12 1 376 1 416 5.93e-78 246
MsG0780037052.01.T01 MTR_8g089630 34.550 411 219 8 10 372 10 418 1.92e-72 232
MsG0780037052.01.T01 MTR_3g030550 38.158 380 209 9 7 377 1 363 3.21e-70 224
MsG0780037052.01.T01 MTR_5g066400 34.250 400 192 11 1 332 1 397 1.18e-66 217
MsG0780037052.01.T01 MTR_2g445210 29.314 423 233 8 8 366 6 426 1.07e-57 194
MsG0780037052.01.T01 MTR_8g007440 32.955 264 150 5 77 319 9 266 8.58e-44 153
MsG0780037052.01.T01 MTR_2g445210 27.957 372 202 8 8 315 6 375 9.61e-44 155
MsG0780037052.01.T01 MTR_3g010170 31.313 297 180 9 91 371 179 467 4.96e-42 153
MsG0780037052.01.T01 MTR_8g070520 31.741 293 173 10 91 366 187 469 1.44e-37 141
MsG0780037052.01.T01 MTR_8g070520 31.295 278 165 9 91 352 187 454 2.92e-34 132
MsG0780037052.01.T01 MTR_3g067945 29.365 252 159 7 9 245 21 268 4.23e-23 101
MsG0780037052.01.T01 MTR_3g067945 33.607 122 78 2 250 368 586 707 2.60e-15 77.8
MsG0780037052.01.T01 MTR_8g008540 70.270 37 11 0 340 376 41 77 4.17e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037052.01.T01 AT3G12110 97.613 377 9 0 1 377 1 377 0.0 770
MsG0780037052.01.T01 AT3G53750 96.286 377 14 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 AT3G53750 96.286 377 14 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 AT2G37620 96.286 377 14 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 AT2G37620 96.286 377 14 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 AT2G37620 96.286 377 14 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 AT2G37620 96.286 377 14 0 1 377 1 377 0.0 762
MsG0780037052.01.T01 AT3G46520 96.286 377 14 0 1 377 1 377 0.0 758
MsG0780037052.01.T01 AT3G46520 96.286 377 14 0 1 377 1 377 0.0 758
MsG0780037052.01.T01 AT5G09810 95.225 377 18 0 1 377 1 377 0.0 756
MsG0780037052.01.T01 AT5G59370 96.021 377 15 0 1 377 1 377 0.0 756
MsG0780037052.01.T01 AT5G59370 96.021 377 15 0 1 377 1 377 0.0 756
MsG0780037052.01.T01 AT1G49240 92.042 377 30 0 1 377 1 377 0.0 744
MsG0780037052.01.T01 AT3G18780 91.777 377 31 0 1 377 1 377 0.0 742
MsG0780037052.01.T01 AT3G18780 91.777 377 31 0 1 377 1 377 0.0 742
MsG0780037052.01.T01 AT3G18780 91.643 359 30 0 1 359 1 359 0.0 702
MsG0780037052.01.T01 AT2G42100 84.783 368 56 0 10 377 11 378 0.0 677
MsG0780037052.01.T01 AT2G42090 70.541 370 104 1 7 376 1 365 0.0 568
MsG0780037052.01.T01 AT2G42170 78.012 332 70 1 46 377 1 329 0.0 559
MsG0780037052.01.T01 AT2G42170 78.012 332 70 1 46 377 1 329 0.0 559
MsG0780037052.01.T01 AT2G42170 77.885 312 66 1 46 357 1 309 0.0 522
MsG0780037052.01.T01 AT2G42170 77.885 312 66 1 46 357 1 309 0.0 522
MsG0780037052.01.T01 AT2G42170 78.319 226 46 1 152 377 9 231 4.83e-132 377
MsG0780037052.01.T01 AT3G27000 43.536 379 200 3 10 374 7 385 1.04e-121 357
MsG0780037052.01.T01 AT1G18450 37.020 443 209 9 1 376 1 440 1.07e-93 287
MsG0780037052.01.T01 AT1G13180 34.223 412 219 9 10 372 9 417 1.13e-72 233
MsG0780037052.01.T01 AT3G60830 37.731 379 212 9 7 377 1 363 1.09e-67 218
MsG0780037052.01.T01 AT3G33520 30.879 421 233 7 10 377 5 420 4.95e-61 202
MsG0780037052.01.T01 AT5G56180 32.394 284 167 9 91 358 50 324 6.11e-37 137
MsG0780037052.01.T01 AT5G56180 32.394 284 167 9 91 358 182 456 3.44e-36 137
MsG0780037052.01.T01 AT3G12380 31.008 258 153 9 9 245 21 274 3.69e-26 110
MsG0780037052.01.T01 AT3G12380 33.103 145 93 2 228 368 572 716 4.74e-16 80.5
MsG0780037052.01.T01 AT3G12380 30.859 256 150 9 9 245 21 268 1.91e-25 108
MsG0780037052.01.T01 AT3G12380 33.103 145 93 2 228 368 566 710 4.98e-16 80.1
MsG0780037052.01.T01 AT1G73910 35.862 145 74 3 1 129 1 142 2.26e-23 95.1
MsG0780037052.01.T01 AT1G73910 35.862 145 74 3 1 129 1 142 2.26e-23 95.1
MsG0780037052.01.T01 AT5G56180 33.663 202 111 8 91 281 182 371 6.24e-21 93.6
MsG0780037052.01.T01 AT1G73910 29.268 123 71 2 1 107 1 123 2.56e-12 65.1

Find 141 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACGGTAACATTGTGCTTTC+AGG 0.144297 7:+18604331 MsG0780037052.01.T01:CDS
AAAAGCACTGGGTGTTCTTC+TGG 0.181767 7:-18603147 None:intergenic
GCAAATAATAATGAATTTAA+AGG 0.187995 7:-18605203 None:intergenic
CATTCTGCGTATGAATTAAC+TGG 0.215336 7:+18605345 MsG0780037052.01.T01:three_prime_UTR
GAGGAAATGAAAATGGAAAA+TGG 0.233782 7:-18600904 None:intergenic
TGCCATGTATGTTGCTATTC+AGG 0.267079 7:+18603245 MsG0780037052.01.T01:CDS
GCAGGTATTGTGTTGGATTC+TGG 0.277388 7:+18603896 MsG0780037052.01.T01:intron
CACTTTCTGTGGACAATTGA+TGG 0.320963 7:-18605083 None:intergenic
GCTACAAGTTGCAATGCTTC+TGG 0.324092 7:-18605177 None:intergenic
AGGAAATGAAAATGGAAAAT+GGG 0.325047 7:-18600903 None:intergenic
ACCTTGATCTTCATGCTACT+TGG 0.331858 7:-18604415 None:intergenic
CTCATTCTGTCAGCAATGCC+TGG 0.344924 7:-18604370 None:intergenic
ATCTTCTCACGATTGGCCTT+AGG 0.347633 7:-18603189 None:intergenic
AAAGCACTGGGTGTTCTTCT+GGG 0.361175 7:-18603146 None:intergenic
GCTGTGTTTCCCAGCATTGT+AGG 0.369101 7:+18602940 MsG0780037052.01.T01:CDS
GAGCAAGGAAATTTCTGCTT+TGG 0.374975 7:+18604390 MsG0780037052.01.T01:CDS
AACATGGAATCGTTAGCAAC+TGG 0.386131 7:+18603070 MsG0780037052.01.T01:CDS
GCTTCCATTCCTATCATAGA+TGG 0.387544 7:-18604241 None:intergenic
AGGGCATAACCCTCGTAGAT+AGG 0.389103 7:-18603941 None:intergenic
CCTTGATCTTCATGCTACTT+GGG 0.389144 7:-18604414 None:intergenic
CTTGTTTGTGACAATGGAAC+TGG 0.397675 7:+18602384 MsG0780037052.01.T01:CDS
CAAATAATAATGAATTTAAA+GGG 0.399404 7:-18605202 None:intergenic
CTGAGAGAAAATACAGTGTC+TGG 0.408420 7:+18604449 MsG0780037052.01.T01:CDS
TCTTCTCACGATTGGCCTTA+GGG 0.411910 7:-18603188 None:intergenic
CAAAATCTTCATCAAGAAAT+CGG 0.413590 7:-18604008 None:intergenic
TGCCATCCTTCGTCTTGATC+TGG 0.418422 7:+18603970 MsG0780037052.01.T01:CDS
CTGGATTGGAGGTTCCATCT+TGG 0.418962 7:+18604468 MsG0780037052.01.T01:CDS
CTGTTCCAACCATCTATGAT+AGG 0.420168 7:+18604232 MsG0780037052.01.T01:CDS
TGAAGTGCGATGTTGATATC+AGG 0.420318 7:+18604299 MsG0780037052.01.T01:CDS
CTAACGATTCCATGTTCAAT+GGG 0.426897 7:-18603063 None:intergenic
CATGTTATTATTCTAAATGT+TGG 0.432525 7:+18605243 MsG0780037052.01.T01:three_prime_UTR
TTGAGTCATCTTCTCACGAT+TGG 0.438247 7:-18603196 None:intergenic
ATCTCTTAGCACCTTCCAGC+AGG 0.441982 7:+18604492 MsG0780037052.01.T01:CDS
CACTGGTGTGATGGTTGGCA+TGG 0.445024 7:+18602975 MsG0780037052.01.T01:CDS
CAACCTCTTGTTTGTGACAA+TGG 0.449997 7:+18602378 MsG0780037052.01.T01:CDS
CAATGGAACTGGAATGGTTA+AGG 0.450612 7:+18602395 MsG0780037052.01.T01:CDS
CCTCGTAGATAGGGACAGTA+TGG 0.450826 7:-18603931 None:intergenic
AGAGAAAAGAGGGTTATTGA+AGG 0.453024 7:+18605131 MsG0780037052.01.T01:three_prime_UTR
CTCGACGGATGAGCTGGTCC+TGG 0.454464 7:-18604140 None:intergenic
TAAATGTTGGAGTGATTATG+AGG 0.454835 7:+18605256 MsG0780037052.01.T01:three_prime_UTR
TCTCTATGCAGGTATTGTGT+TGG 0.455001 7:+18603889 MsG0780037052.01.T01:intron
CTACGAATTGCCTGATGGAC+AGG 0.461381 7:+18604168 MsG0780037052.01.T01:CDS
GCTAACGATTCCATGTTCAA+TGG 0.473865 7:-18603064 None:intergenic
GACACGAAGCTCATTGTAGA+AGG 0.477040 7:-18603121 None:intergenic
ATGGTGATCACCTGTCCATC+AGG 0.477697 7:-18604178 None:intergenic
GGAGCCTCAGTTAAAAGCAC+TGG 0.477920 7:-18603159 None:intergenic
AGAAAATACAGTGTCTGGAT+TGG 0.479498 7:+18604454 MsG0780037052.01.T01:CDS
AAGGCAGAATATGATGAATC+TGG 0.482638 7:+18605059 MsG0780037052.01.T01:CDS
CTATCATAGATGGTTGGAAC+AGG 0.482778 7:-18604231 None:intergenic
AGCAAGAGCTCGAGACAGCC+AGG 0.483315 7:+18604122 MsG0780037052.01.T01:CDS
CTCAAATACCCCATTGAACA+TGG 0.487849 7:+18603054 MsG0780037052.01.T01:CDS
AAATACAGTGTCTGGATTGG+AGG 0.490757 7:+18604457 MsG0780037052.01.T01:CDS
ATCCTTCGTCTTGATCTGGC+TGG 0.494460 7:+18603974 MsG0780037052.01.T01:CDS
AAGGAAAATGCCGAGGGTGA+TGG 0.500817 7:-18601024 None:intergenic
GCTCTTCTCGACGGATGAGC+TGG 0.511637 7:-18604146 None:intergenic
TGAATAGCAACATACATGGC+AGG 0.512298 7:-18603243 None:intergenic
ACGAGGACGACCTACAATGC+TGG 0.512907 7:-18602950 None:intergenic
GAAGTGAGAGAGAGAGTGTG+TGG 0.513512 7:-18600969 None:intergenic
GGAAATGAAAATGGAAAATG+GGG 0.516548 7:-18600902 None:intergenic
AGACGAGCGTTTCAGATGTC+CGG 0.524785 7:+18604204 MsG0780037052.01.T01:CDS
CTTGATCTTCATGCTACTTG+GGG 0.525749 7:-18604413 None:intergenic
GACGAAGGATGGCATGTGGA+AGG 0.532459 7:-18603961 None:intergenic
TCTGAAACGCTCGTCTCCGA+TGG 0.533062 7:-18604197 None:intergenic
TCCTCGTCACACTGGTGTGA+TGG 0.533985 7:+18602966 MsG0780037052.01.T01:CDS
ATTGTGTTGGATTCTGGTGA+TGG 0.535950 7:+18603902 MsG0780037052.01.T01:CDS
GTCAGCAATGCCTGGGAACA+TGG 0.536051 7:-18604362 None:intergenic
CGTTAGCAACTGGGACGACA+TGG 0.537257 7:+18603080 MsG0780037052.01.T01:CDS
GGGCATAACCCTCGTAGATA+GGG 0.538631 7:-18603940 None:intergenic
TCTTTGCCTTCCATCACCCT+CGG 0.540093 7:+18601014 MsG0780037052.01.T01:five_prime_UTR
CTTACCGGTGGTACGACCAC+TGG 0.540927 7:-18603286 None:intergenic
GAGAAAAGAGGGTTATTGAA+GGG 0.541327 7:+18605132 MsG0780037052.01.T01:three_prime_UTR
AGAGATGAAATGTGAGCCGT+TGG 0.542140 7:-18600859 None:intergenic
AGGGTGATGGAAGGCAAAGA+AGG 0.543078 7:-18601011 None:intergenic
CCCAAGTAGCATGAAGATCA+AGG 0.546192 7:+18604414 MsG0780037052.01.T01:CDS
CGAGCTCTTGCTCATAGTCA+AGG 0.546253 7:-18604111 None:intergenic
CCATTCCTATCATAGATGGT+TGG 0.552199 7:-18604237 None:intergenic
CGAGGACGACCTACAATGCT+GGG 0.552606 7:-18602949 None:intergenic
AACAATTTCTCGCTCTGCTG+AGG 0.553097 7:-18604056 None:intergenic
GTGATGAGGCACAGTCTAAG+AGG 0.553165 7:+18603019 MsG0780037052.01.T01:CDS
AGCCAGATCAAGACGAAGGA+TGG 0.553433 7:-18603972 None:intergenic
AAGTGAGAGAGAGAGTGTGT+GGG 0.555265 7:-18600968 None:intergenic
ATCAACATCGCACTTCATGA+TGG 0.558200 7:-18604293 None:intergenic
ATGATAGGAATGGAAGCAGC+AGG 0.559211 7:+18604247 MsG0780037052.01.T01:CDS
GAATAGCAACATACATGGCA+GGG 0.569012 7:-18603242 None:intergenic
CCAACCATCTATGATAGGAA+TGG 0.569599 7:+18604237 MsG0780037052.01.T01:CDS
TCATTCTGTCAGCAATGCCT+GGG 0.569632 7:-18604369 None:intergenic
GGAGGAACAACCATGTTCCC+AGG 0.570238 7:+18604352 MsG0780037052.01.T01:CDS
AAGCACTGGGTGTTCTTCTG+GGG 0.572123 7:-18603145 None:intergenic
ACATGGAATCGTTAGCAACT+GGG 0.574134 7:+18603071 MsG0780037052.01.T01:CDS
AATTTCTCGCTCTGCTGAGG+TGG 0.575717 7:-18604053 None:intergenic
TGATGAGGCACAGTCTAAGA+GGG 0.579288 7:+18603020 MsG0780037052.01.T01:CDS
CAGCTTAGAAGCACTTTCTG+TGG 0.581853 7:-18605094 None:intergenic
ATTCTGCGTATGAATTAACT+GGG 0.585793 7:+18605346 MsG0780037052.01.T01:three_prime_UTR
CGATTGGCCTTAGGGTTGAG+AGG 0.589725 7:-18603180 None:intergenic
ACGAAGGATGGCATGTGGAA+GGG 0.591719 7:-18603960 None:intergenic
GGTGCTAAGAGATGCCAAGA+TGG 0.593241 7:-18604482 None:intergenic
GATGGTTGGAACAGGACCTC+CGG 0.593491 7:-18604223 None:intergenic
AAGAGCTACGAATTGCCTGA+TGG 0.595436 7:+18604163 MsG0780037052.01.T01:CDS
TGAGGCTCCTCTCAACCCTA+AGG 0.595543 7:+18603173 MsG0780037052.01.T01:CDS
CGTCACACTGGTGTGATGGT+TGG 0.597543 7:+18602970 MsG0780037052.01.T01:CDS
ACTGGTGTGATGGTTGGCAT+GGG 0.600381 7:+18602976 MsG0780037052.01.T01:CDS
GATATCAGGAAAGACTTGTA+CGG 0.601211 7:+18604313 MsG0780037052.01.T01:CDS
GATGGACAGGTGATCACCAT+CGG 0.601892 7:+18604181 MsG0780037052.01.T01:CDS
TACGCCAGTGGTCGTACCAC+CGG 0.602745 7:+18603282 MsG0780037052.01.T01:CDS
ATCCTGCAGATAGTAGAAGA+TGG 0.602776 7:+18602338 MsG0780037052.01.T01:intron
TTGTGACAATGGAACTGGAA+TGG 0.606936 7:+18602389 MsG0780037052.01.T01:CDS
GATTCAAAATAACAATCCAA+CGG 0.610862 7:+18600843 MsG0780037052.01.T01:five_prime_UTR
GTTCCATTGTCACAAACAAG+AGG 0.610975 7:-18602381 None:intergenic
AACAAAACAAACCTGCTGGA+AGG 0.616042 7:-18604503 None:intergenic
GAGCCTCAGTTAAAAGCACT+GGG 0.616759 7:-18603158 None:intergenic
CTTCATGATGGAGTTGTATG+TGG 0.618935 7:-18604281 None:intergenic
CATTGCTGACAGAATGAGCA+AGG 0.623432 7:+18604375 MsG0780037052.01.T01:CDS
ATGCTGGGAAACACAGCACG+AGG 0.626971 7:-18602934 None:intergenic
GAGCTCTTGCTCATAGTCAA+GGG 0.628126 7:-18604110 None:intergenic
GTAGGTCGTCCTCGTCACAC+TGG 0.629317 7:+18602958 MsG0780037052.01.T01:CDS
GGCCTGAATAGCAACATACA+TGG 0.629684 7:-18603247 None:intergenic
GGTAACATTGTGCTTTCAGG+AGG 0.633227 7:+18604334 MsG0780037052.01.T01:CDS
GCTGGGAAACACAGCACGAG+GGG 0.634384 7:-18602932 None:intergenic
AGAAACATATACCTTTGGGA+AGG 0.635373 7:-18601043 None:intergenic
AAAATGCCGAGGGTGATGGA+AGG 0.638138 7:-18601020 None:intergenic
TGCTGGGAAACACAGCACGA+GGG 0.642727 7:-18602933 None:intergenic
AATAGCAACATACATGGCAG+GGG 0.644788 7:-18603241 None:intergenic
CTTTGGGAAGGAAAATGCCG+AGG 0.647515 7:-18601031 None:intergenic
TTTGGGAAGGAAAATGCCGA+GGG 0.653422 7:-18601030 None:intergenic
GTAGAAGATGGCAGACGCTG+AGG 0.654298 7:+18602350 MsG0780037052.01.T01:exon
TCAAGACGAAGGATGGCATG+TGG 0.658783 7:-18603965 None:intergenic
ACCATCACACCAGTGTGACG+AGG 0.660573 7:-18602967 None:intergenic
AGATGCATATGTTGGTGATG+AGG 0.661651 7:+18603005 MsG0780037052.01.T01:CDS
GTTCTTTCACTATACGCCAG+TGG 0.665588 7:+18603270 MsG0780037052.01.T01:CDS
CCATACTGTCCCTATCTACG+AGG 0.672368 7:+18603931 MsG0780037052.01.T01:CDS
CAATTCGTAGCTCTTCTCGA+CGG 0.674512 7:-18604155 None:intergenic
ACTGGCGTATAGTGAAAGAA+CGG 0.677203 7:-18603268 None:intergenic
GACCAGCCAGATCAAGACGA+AGG 0.686380 7:-18603976 None:intergenic
CGAGCGTTTCAGATGTCCGG+AGG 0.696555 7:+18604207 MsG0780037052.01.T01:CDS
AGTGCAGATGTGGATTGCAA+AGG 0.699053 7:+18605040 MsG0780037052.01.T01:intron
GATGAGGCACAGTCTAAGAG+GGG 0.706688 7:+18603021 MsG0780037052.01.T01:CDS
CATACTGTCCCTATCTACGA+GGG 0.714771 7:+18603932 MsG0780037052.01.T01:CDS
TAACGATTCCATGTTCAATG+GGG 0.715992 7:-18603062 None:intergenic
TTGCATATATATATCAAACG+TGG 0.718087 7:-18605381 None:intergenic
GAAGGAGAGAAAATGCACAG+AGG 0.737959 7:-18600993 None:intergenic
AAGTAGCATGAAGATCAAGG+TGG 0.766332 7:+18604417 MsG0780037052.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATAATAATGAATTTAAA+GGG - Chr7:18605205-18605224 None:intergenic 10.0%
!!! TATTATCTTATAATTTTGTT+AGG + Chr7:18602708-18602727 MsG0780037052.01.T01:intron 10.0%
!! AATATAAAGCAAAACAATTA+AGG - Chr7:18603724-18603743 None:intergenic 15.0%
!! ATTAAGCTATTTATTCAAAA+AGG + Chr7:18604888-18604907 MsG0780037052.01.T01:intron 15.0%
!! GCAAATAATAATGAATTTAA+AGG - Chr7:18605206-18605225 None:intergenic 15.0%
!! TTAAGCTATTTATTCAAAAA+GGG + Chr7:18604889-18604908 MsG0780037052.01.T01:intron 15.0%
!!! AAAAAAGAAACAATTTTGAT+TGG + Chr7:18601635-18601654 MsG0780037052.01.T01:intron 15.0%
!!! AAAACTTAATAAGCTATTTT+TGG + Chr7:18604735-18604754 MsG0780037052.01.T01:intron 15.0%
!!! AAAATTGATTTTAACATGTT+TGG + Chr7:18602049-18602068 MsG0780037052.01.T01:intron 15.0%
!!! AAAATTTTCATTTTTTGAGA+GGG + Chr7:18601523-18601542 MsG0780037052.01.T01:intron 15.0%
!!! ATTGAGAATTTTCAAATTTA+TGG - Chr7:18604618-18604637 None:intergenic 15.0%
!!! GAAAATTTTATCATATACAA+TGG - Chr7:18601512-18601531 None:intergenic 15.0%
!!! TAAAATTTTCATTTTTTGAG+AGG + Chr7:18601522-18601541 MsG0780037052.01.T01:intron 15.0%
!!! TTTAATTGATTTTGAGAAAA+TGG + Chr7:18602867-18602886 MsG0780037052.01.T01:intron 15.0%
!!! TTTATAAATTCCAAGTTTTT+GGG - Chr7:18604590-18604609 None:intergenic 15.0%
!!! TTTTATAAATTCCAAGTTTT+TGG - Chr7:18604591-18604610 None:intergenic 15.0%
!! AAATAAAATAAACACCTAGA+TGG - Chr7:18601606-18601625 None:intergenic 20.0%
!! ATTATATGACATTGTTATCT+AGG + Chr7:18604563-18604582 MsG0780037052.01.T01:intron 20.0%
!! ATTCTCTATCATAATTGAAA+AGG + Chr7:18603614-18603633 MsG0780037052.01.T01:intron 20.0%
!! CATGTTATTATTCTAAATGT+TGG + Chr7:18605243-18605262 MsG0780037052.01.T01:three_prime_UTR 20.0%
!! CGTTATAATCAATAAATTCT+CGG + Chr7:18602202-18602221 MsG0780037052.01.T01:intron 20.0%
!! GATTTAGTTAGATTTCAAAT+GGG + Chr7:18601463-18601482 MsG0780037052.01.T01:intron 20.0%
!! TGATTTAGTTAGATTTCAAA+TGG + Chr7:18601462-18601481 MsG0780037052.01.T01:intron 20.0%
!! TTATTTATGGTTAATGAAGA+TGG + Chr7:18601703-18601722 MsG0780037052.01.T01:intron 20.0%
!! TTGAAAATGAAAATGTTGTT+AGG + Chr7:18603686-18603705 MsG0780037052.01.T01:intron 20.0%
!! TTGAAACACCAAAAATAAAT+GGG - Chr7:18603436-18603455 None:intergenic 20.0%
!! TTGATTATGTAGTTTAAACA+TGG + Chr7:18603336-18603355 MsG0780037052.01.T01:intron 20.0%
!!! AAACAAAATAGTTTGTAGTT+AGG - Chr7:18601969-18601988 None:intergenic 20.0%
!!! ACAAAGTTGATAAAAACAAA+AGG - Chr7:18602621-18602640 None:intergenic 20.0%
!!! AGAAATGATCTTATAGTTTT+TGG + Chr7:18602421-18602440 MsG0780037052.01.T01:intron 20.0%
!!! GATTTTATTTGTTGTTGATT+AGG + Chr7:18601125-18601144 MsG0780037052.01.T01:intron 20.0%
!!! GGTGTTTATTTTATTTTGAA+AGG + Chr7:18601610-18601629 MsG0780037052.01.T01:intron 20.0%
!!! GTGTTTTTGTGATTTATTTA+TGG + Chr7:18601690-18601709 MsG0780037052.01.T01:intron 20.0%
!!! TAATAGTATTGAATTTGAGT+TGG + Chr7:18601408-18601427 MsG0780037052.01.T01:intron 20.0%
!!! TTATAAATTCCAAGTTTTTG+GGG - Chr7:18604589-18604608 None:intergenic 20.0%
!!! TTGATAGCATTAAGTTTTAT+TGG + Chr7:18602833-18602852 MsG0780037052.01.T01:intron 20.0%
!!! TTTAATTTGAAGCTAGAATT+TGG + Chr7:18602111-18602130 MsG0780037052.01.T01:intron 20.0%
!!! TTTGAGGCTAAAAAATAATT+CGG - Chr7:18602149-18602168 None:intergenic 20.0%
!!! TTTTGAGTCATTTCTTAATT+TGG + Chr7:18601243-18601262 MsG0780037052.01.T01:intron 20.0%
! AAAAGGACTAATATGATAGA+AGG + Chr7:18604928-18604947 MsG0780037052.01.T01:intron 25.0%
! AAATGTTGTTAGGAAGTAAA+TGG + Chr7:18603696-18603715 MsG0780037052.01.T01:intron 25.0%
! AATGTTGTTAGGAAGTAAAT+GGG + Chr7:18603697-18603716 MsG0780037052.01.T01:intron 25.0%
! AGAAAAAAGAGAAACAAGAA+AGG - Chr7:18604529-18604548 None:intergenic 25.0%
! AGACTCAATATATATTCCAT+TGG + Chr7:18604994-18605013 MsG0780037052.01.T01:intron 25.0%
! AGATATAGATACACAATAGA+GGG - Chr7:18602508-18602527 None:intergenic 25.0%
! AGGAAATGAAAATGGAAAAT+GGG - Chr7:18600906-18600925 None:intergenic 25.0%
! CAAAAAAGAGGAAATGAAAA+TGG - Chr7:18600914-18600933 None:intergenic 25.0%
! CAAAATCTTCATCAAGAAAT+CGG - Chr7:18604011-18604030 None:intergenic 25.0%
! CAATTATTTAGCGATATTTG+AGG + Chr7:18601834-18601853 MsG0780037052.01.T01:intron 25.0%
! CATATGCATAAGCATTTATA+TGG + Chr7:18604841-18604860 MsG0780037052.01.T01:intron 25.0%
! CTTGAAACACCAAAAATAAA+TGG - Chr7:18603437-18603456 None:intergenic 25.0%
! GAAAAGAAACATATACCTTT+GGG - Chr7:18601050-18601069 None:intergenic 25.0%
! GATTCAAAATAACAATCCAA+CGG + Chr7:18600843-18600862 MsG0780037052.01.T01:five_prime_UTR 25.0%
! GCAATTAAAAAATGACTTAC+CGG - Chr7:18603304-18603323 None:intergenic 25.0%
! GTCATAAATCAAATGACAAA+TGG - Chr7:18602652-18602671 None:intergenic 25.0%
! TAGATATAGATACACAATAG+AGG - Chr7:18602509-18602528 None:intergenic 25.0%
! TATCCAAACCAACAAAAAAA+CGG - Chr7:18601371-18601390 None:intergenic 25.0%
! TGAAAAGAAACATATACCTT+TGG - Chr7:18601051-18601070 None:intergenic 25.0%
! TTGAGGTAAAAAGTGAAATT+TGG + Chr7:18601851-18601870 MsG0780037052.01.T01:intron 25.0%
! TTGATTAGGTAGATTTGAAA+TGG + Chr7:18601139-18601158 MsG0780037052.01.T01:intron 25.0%
! TTGCATATATATATCAAACG+TGG - Chr7:18605384-18605403 None:intergenic 25.0%
!! GAGTTGAAACAATTAATTTG+AGG - Chr7:18602165-18602184 None:intergenic 25.0%
!! GCATTATCATATTTCCTTTT+CGG - Chr7:18601911-18601930 None:intergenic 25.0%
!! TATATTGAGTCTGAAATTGT+AGG - Chr7:18604986-18605005 None:intergenic 25.0%
!! TCATTTCTTAATTTGGTTGA+TGG + Chr7:18601250-18601269 MsG0780037052.01.T01:intron 25.0%
!! TGATTAGGTAGATTTGAAAT+GGG + Chr7:18601140-18601159 MsG0780037052.01.T01:intron 25.0%
!! TTCTATCATATTAGTCCTTT+TGG - Chr7:18604929-18604948 None:intergenic 25.0%
!!! AAGTTGATAAAAACAAAAGG+TGG - Chr7:18602618-18602637 None:intergenic 25.0%
!!! AGTTGATAAAAACAAAAGGT+GGG - Chr7:18602617-18602636 None:intergenic 25.0%
!!! CATTTTTACCGTTTTTTTGT+TGG + Chr7:18601360-18601379 MsG0780037052.01.T01:intron 25.0%
!!! TATGATAATGCTTTGTTTTG+TGG + Chr7:18601920-18601939 MsG0780037052.01.T01:intron 25.0%
!!! TCATTTTAATTGATCCATCT+AGG + Chr7:18601589-18601608 MsG0780037052.01.T01:intron 25.0%
AAACTTAATGCTATCAACCA+TGG - Chr7:18602830-18602849 None:intergenic 30.0%
AAGTTATGCTAGAGAACTAA+TGG - Chr7:18604768-18604787 None:intergenic 30.0%
AGAAAGAATAGATTCCGAAA+AGG + Chr7:18601894-18601913 MsG0780037052.01.T01:intron 30.0%
AGGTAAAAAGTGAAATTTGG+TGG + Chr7:18601854-18601873 MsG0780037052.01.T01:intron 30.0%
ATTAAAAAATGACTTACCGG+TGG - Chr7:18603301-18603320 None:intergenic 30.0%
ATTCTGCGTATGAATTAACT+GGG + Chr7:18605346-18605365 MsG0780037052.01.T01:three_prime_UTR 30.0%
CAAAAACACAAACACAATGT+TGG - Chr7:18601679-18601698 None:intergenic 30.0%
GACTAGGTGTAATGTATATT+TGG + Chr7:18602007-18602026 MsG0780037052.01.T01:intron 30.0%
GAGGAAATGAAAATGGAAAA+TGG - Chr7:18600907-18600926 None:intergenic 30.0%
GAGTCTAACAAACAAAAAAG+AGG - Chr7:18600926-18600945 None:intergenic 30.0%
GATATAGATACACAATAGAG+GGG - Chr7:18602507-18602526 None:intergenic 30.0%
GGAAATGAAAATGGAAAATG+GGG - Chr7:18600905-18600924 None:intergenic 30.0%
TAAATGTTGGAGTGATTATG+AGG + Chr7:18605256-18605275 MsG0780037052.01.T01:three_prime_UTR 30.0%
TCAATAAATTCTCGGTTTCA+AGG + Chr7:18602210-18602229 MsG0780037052.01.T01:intron 30.0%
TCAGATTGATATAGTAAGTG+AGG + Chr7:18602243-18602262 MsG0780037052.01.T01:intron 30.0%
TGGATGTGTTCGAATAATAT+TGG + Chr7:18602069-18602088 MsG0780037052.01.T01:intron 30.0%
TGTGAGAAGTAGGATTTATT+CGG + Chr7:18603789-18603808 MsG0780037052.01.T01:intron 30.0%
TTATCTGACATAAGTTCTCT+AGG + Chr7:18604697-18604716 MsG0780037052.01.T01:intron 30.0%
! AAAGTTTGTGTCATTACCAA+TGG - Chr7:18605013-18605032 None:intergenic 30.0%
! AAGTTGATTTCAGATGTTTG+TGG + Chr7:18601756-18601775 MsG0780037052.01.T01:intron 30.0%
! ACAAACACAATGTTGGTTAA+TGG - Chr7:18601672-18601691 None:intergenic 30.0%
! AGTTTTACTTAGTATGTCTG+TGG - Chr7:18603667-18603686 None:intergenic 30.0%
!! TAAGTCTGCCCATTTATTTT+TGG + Chr7:18603425-18603444 MsG0780037052.01.T01:intron 30.0%
!! TCTTGCTTTTGTTCTTGATT+AGG + Chr7:18601277-18601296 MsG0780037052.01.T01:intron 30.0%
!!! TACTGTTTTGAGAGAAAAGA+GGG + Chr7:18605121-18605140 MsG0780037052.01.T01:three_prime_UTR 30.0%
!!! TGATCTTATAGTTTTTGGCA+TGG + Chr7:18602426-18602445 MsG0780037052.01.T01:intron 30.0%
!!! TTACCGTTTTTTTGTTGGTT+TGG + Chr7:18601365-18601384 MsG0780037052.01.T01:intron 30.0%
!!! TTTGGTTTTACATTTGCATG+AGG + Chr7:18602025-18602044 MsG0780037052.01.T01:intron 30.0%
AAAGTTCATCACATGACATG+TGG - Chr7:18603848-18603867 None:intergenic 35.0%
AACTTAGTTGGCACTGTTTA+TGG + Chr7:18602282-18602301 MsG0780037052.01.T01:intron 35.0%
AAGGCAGAATATGATGAATC+TGG + Chr7:18605059-18605078 MsG0780037052.01.T01:CDS 35.0%
ACTTAGTTGGCACTGTTTAT+GGG + Chr7:18602283-18602302 MsG0780037052.01.T01:intron 35.0%
AGAAAATACAGTGTCTGGAT+TGG + Chr7:18604454-18604473 MsG0780037052.01.T01:CDS 35.0%
AGAGAAAAGAGGGTTATTGA+AGG + Chr7:18605131-18605150 MsG0780037052.01.T01:three_prime_UTR 35.0%
CATTCTGCGTATGAATTAAC+TGG + Chr7:18605345-18605364 MsG0780037052.01.T01:three_prime_UTR 35.0%
CGAGATTCTTCATAGAGAAT+CGG - Chr7:18602578-18602597 None:intergenic 35.0%
CTAACGATTCCATGTTCAAT+GGG - Chr7:18603066-18603085 None:intergenic 35.0%
GAGAAAAGAGGGTTATTGAA+GGG + Chr7:18605132-18605151 MsG0780037052.01.T01:three_prime_UTR 35.0%
GAGATTCTTCATAGAGAATC+GGG - Chr7:18602577-18602596 None:intergenic 35.0%
GATATAGTAAGTGAGGTAAG+TGG + Chr7:18602250-18602269 MsG0780037052.01.T01:intron 35.0%
GATATCAGGAAAGACTTGTA+CGG + Chr7:18604313-18604332 MsG0780037052.01.T01:CDS 35.0%
GGATCTATCATAGTTAAGCT+TGG + Chr7:18601724-18601743 MsG0780037052.01.T01:intron 35.0%
GGATTCATCATAATGAACTG+TGG - Chr7:18602556-18602575 None:intergenic 35.0%
GGTCAAAAAGATGCATATGT+TGG + Chr7:18602997-18603016 MsG0780037052.01.T01:CDS 35.0%
TAACGATTCCATGTTCAATG+GGG - Chr7:18603065-18603084 None:intergenic 35.0%
TAGTGCATGATTAATCGACT+AGG + Chr7:18601991-18602010 MsG0780037052.01.T01:intron 35.0%
TCCAGCCTGAAAAGATAAAT+CGG - Chr7:18602896-18602915 None:intergenic 35.0%
TTGTCAGACAATTTCAGAGA+CGG + Chr7:18604649-18604668 MsG0780037052.01.T01:intron 35.0%
! AGAAACATATACCTTTGGGA+AGG - Chr7:18601046-18601065 None:intergenic 35.0%
! ATAGTTTGTAGTTAGGAGAG+TGG - Chr7:18601962-18601981 None:intergenic 35.0%
! CACTGACTGTTAAGATGAAT+GGG + Chr7:18603753-18603772 MsG0780037052.01.T01:intron 35.0%
! GGATTCCGATTTATCTTTTC+AGG + Chr7:18602888-18602907 MsG0780037052.01.T01:intron 35.0%
! TAGTTTGTAGTTAGGAGAGT+GGG - Chr7:18601961-18601980 None:intergenic 35.0%
! TATGTTTTCTGTCTCTATGC+AGG + Chr7:18603878-18603897 MsG0780037052.01.T01:intron 35.0%
! TCACTGACTGTTAAGATGAA+TGG + Chr7:18603752-18603771 MsG0780037052.01.T01:intron 35.0%
! TCCTTTTGGATCAGTCATTT+CGG - Chr7:18604915-18604934 None:intergenic 35.0%
! TTTTCTTATGAGTGCAGATG+TGG + Chr7:18605030-18605049 MsG0780037052.01.T01:intron 35.0%
!! AAGCTAGAATTTGGAGCTTT+TGG + Chr7:18602120-18602139 MsG0780037052.01.T01:intron 35.0%
!! TGATCTTGAGTTGATAACCA+TGG + Chr7:18602810-18602829 MsG0780037052.01.T01:intron 35.0%
!!! ATGAAGATTTTGACTGAACG+TGG + Chr7:18604019-18604038 MsG0780037052.01.T01:CDS 35.0%
!!! CTACTGTTTTGAGAGAAAAG+AGG + Chr7:18605120-18605139 MsG0780037052.01.T01:three_prime_UTR 35.0%
AACAAAACAAACCTGCTGGA+AGG - Chr7:18604506-18604525 None:intergenic 40.0%
AACATGGAATCGTTAGCAAC+TGG + Chr7:18603070-18603089 MsG0780037052.01.T01:CDS 40.0%
AAGGAACAAAACAAACCTGC+TGG - Chr7:18604510-18604529 None:intergenic 40.0%
AAGTAGCATGAAGATCAAGG+TGG + Chr7:18604417-18604436 MsG0780037052.01.T01:CDS 40.0%
AAGTAGCTTCTGTGAGAAGT+AGG + Chr7:18603779-18603798 MsG0780037052.01.T01:intron 40.0%
AATAGCAACATACATGGCAG+GGG - Chr7:18603244-18603263 None:intergenic 40.0%
ACATGGAATCGTTAGCAACT+GGG + Chr7:18603071-18603090 MsG0780037052.01.T01:CDS 40.0%
ACCTTGATCTTCATGCTACT+TGG - Chr7:18604418-18604437 None:intergenic 40.0%
ACTGGCGTATAGTGAAAGAA+CGG - Chr7:18603271-18603290 None:intergenic 40.0%
ATAGTAAGTGAGGTAAGTGG+AGG + Chr7:18602253-18602272 MsG0780037052.01.T01:intron 40.0%
ATCAACATCGCACTTCATGA+TGG - Chr7:18604296-18604315 None:intergenic 40.0%
ATCCTGCAGATAGTAGAAGA+TGG + Chr7:18602338-18602357 MsG0780037052.01.T01:intron 40.0%
ATTGTGTTGGATTCTGGTGA+TGG + Chr7:18603902-18603921 MsG0780037052.01.T01:CDS 40.0%
CAATGGAACTGGAATGGTTA+AGG + Chr7:18602395-18602414 MsG0780037052.01.T01:CDS 40.0%
CACTTTCTGTGGACAATTGA+TGG - Chr7:18605086-18605105 None:intergenic 40.0%
CCAACCATCTATGATAGGAA+TGG + Chr7:18604237-18604256 MsG0780037052.01.T01:CDS 40.0%
CCATTCCTATCATAGATGGT+TGG - Chr7:18604240-18604259 None:intergenic 40.0%
CTATCATAGATGGTTGGAAC+AGG - Chr7:18604234-18604253 None:intergenic 40.0%
CTCAAATACCCCATTGAACA+TGG + Chr7:18603054-18603073 MsG0780037052.01.T01:CDS 40.0%
CTGAGAGAAAATACAGTGTC+TGG + Chr7:18604449-18604468 MsG0780037052.01.T01:CDS 40.0%
CTGTTCCAACCATCTATGAT+AGG + Chr7:18604232-18604251 MsG0780037052.01.T01:CDS 40.0%
CTTGTTTGTGACAATGGAAC+TGG + Chr7:18602384-18602403 MsG0780037052.01.T01:CDS 40.0%
GAATAGCAACATACATGGCA+GGG - Chr7:18603245-18603264 None:intergenic 40.0%
GAATCCAATCTAGAAGTTGC+TGG - Chr7:18603362-18603381 None:intergenic 40.0%
GAGAGTGGGAAAACATCAAA+GGG - Chr7:18601947-18601966 None:intergenic 40.0%
GAGCAAGGAAATTTCTGCTT+TGG + Chr7:18604390-18604409 MsG0780037052.01.T01:CDS 40.0%
GCTAACGATTCCATGTTCAA+TGG - Chr7:18603067-18603086 None:intergenic 40.0%
GCTTCCATTCCTATCATAGA+TGG - Chr7:18604244-18604263 None:intergenic 40.0%
GGGACGACATGGAAAAAATT+TGG + Chr7:18603091-18603110 MsG0780037052.01.T01:CDS 40.0%
GTTCCATTGTCACAAACAAG+AGG - Chr7:18602384-18602403 None:intergenic 40.0%
TACGGTAACATTGTGCTTTC+AGG + Chr7:18604331-18604350 MsG0780037052.01.T01:CDS 40.0%
TAGTAAGTGAGGTAAGTGGA+GGG + Chr7:18602254-18602273 MsG0780037052.01.T01:intron 40.0%
TCTGTGGCTAGAATGACATT+TGG - Chr7:18603651-18603670 None:intergenic 40.0%
TGAAGTGCGATGTTGATATC+AGG + Chr7:18604299-18604318 MsG0780037052.01.T01:CDS 40.0%
TGAATAGCAACATACATGGC+AGG - Chr7:18603246-18603265 None:intergenic 40.0%
TGGAGGGTGAAAAACTTAGT+TGG + Chr7:18602270-18602289 MsG0780037052.01.T01:intron 40.0%
TTATCTAGGCCCCAAAAACT+TGG + Chr7:18604577-18604596 MsG0780037052.01.T01:intron 40.0%
TTGAGTCATCTTCTCACGAT+TGG - Chr7:18603199-18603218 None:intergenic 40.0%
TTGTGACAATGGAACTGGAA+TGG + Chr7:18602389-18602408 MsG0780037052.01.T01:CDS 40.0%
! AAATACAGTGTCTGGATTGG+AGG + Chr7:18604457-18604476 MsG0780037052.01.T01:CDS 40.0%
! ACACTGTATTTTCTCTCAGG+TGG - Chr7:18604448-18604467 None:intergenic 40.0%
! CAACCTCTTGTTTGTGACAA+TGG + Chr7:18602378-18602397 MsG0780037052.01.T01:CDS 40.0%
! CAGACACTGTATTTTCTCTC+AGG - Chr7:18604451-18604470 None:intergenic 40.0%
! CCTTGATCTTCATGCTACTT+GGG - Chr7:18604417-18604436 None:intergenic 40.0%
! CTTCATGATGGAGTTGTATG+TGG - Chr7:18604284-18604303 None:intergenic 40.0%
! CTTGATCTTCATGCTACTTG+GGG - Chr7:18604416-18604435 None:intergenic 40.0%
! TCTCTATGCAGGTATTGTGT+TGG + Chr7:18603889-18603908 MsG0780037052.01.T01:intron 40.0%
! TGCCATGTATGTTGCTATTC+AGG + Chr7:18603245-18603264 MsG0780037052.01.T01:CDS 40.0%
!! AGATGCATATGTTGGTGATG+AGG + Chr7:18603005-18603024 MsG0780037052.01.T01:CDS 40.0%
!! TCCGATTTATCTTTTCAGGC+TGG + Chr7:18602892-18602911 MsG0780037052.01.T01:intron 40.0%
AACAATTTCTCGCTCTGCTG+AGG - Chr7:18604059-18604078 None:intergenic 45.0%
AAGAGCTACGAATTGCCTGA+TGG + Chr7:18604163-18604182 MsG0780037052.01.T01:CDS 45.0%
AGAGATGAAATGTGAGCCGT+TGG - Chr7:18600862-18600881 None:intergenic 45.0%
ATGATAGGAATGGAAGCAGC+AGG + Chr7:18604247-18604266 MsG0780037052.01.T01:CDS 45.0%
ATGGCCAGCAACTTCTAGAT+TGG + Chr7:18603355-18603374 MsG0780037052.01.T01:intron 45.0%
CAATTCGTAGCTCTTCTCGA+CGG - Chr7:18604158-18604177 None:intergenic 45.0%
CATACTGTCCCTATCTACGA+GGG + Chr7:18603932-18603951 MsG0780037052.01.T01:CDS 45.0%
CATTGCTGACAGAATGAGCA+AGG + Chr7:18604375-18604394 MsG0780037052.01.T01:CDS 45.0%
CCCAAGTAGCATGAAGATCA+AGG + Chr7:18604414-18604433 MsG0780037052.01.T01:CDS 45.0%
GAAGGAGAGAAAATGCACAG+AGG - Chr7:18600996-18601015 None:intergenic 45.0%
GACACGAAGCTCATTGTAGA+AGG - Chr7:18603124-18603143 None:intergenic 45.0%
GAGCTCTTGCTCATAGTCAA+GGG - Chr7:18604113-18604132 None:intergenic 45.0%
GCCGAAATGACTGATCCAAA+AGG + Chr7:18604911-18604930 MsG0780037052.01.T01:intron 45.0%
GCTACAAGTTGCAATGCTTC+TGG - Chr7:18605180-18605199 None:intergenic 45.0%
GGAGAGTGGGAAAACATCAA+AGG - Chr7:18601948-18601967 None:intergenic 45.0%
GGCCTGAATAGCAACATACA+TGG - Chr7:18603250-18603269 None:intergenic 45.0%
GGTAACATTGTGCTTTCAGG+AGG + Chr7:18604334-18604353 MsG0780037052.01.T01:CDS 45.0%
GTTCTTTCACTATACGCCAG+TGG + Chr7:18603270-18603289 MsG0780037052.01.T01:CDS 45.0%
TCATTCTGTCAGCAATGCCT+GGG - Chr7:18604372-18604391 None:intergenic 45.0%
TGATGAGGCACAGTCTAAGA+GGG + Chr7:18603020-18603039 MsG0780037052.01.T01:CDS 45.0%
TGCCATCTTCTACTATCTGC+AGG - Chr7:18602343-18602362 None:intergenic 45.0%
TTTGGGAAGGAAAATGCCGA+GGG - Chr7:18601033-18601052 None:intergenic 45.0%
! AAGTGAGAGAGAGAGTGTGT+GGG - Chr7:18600971-18600990 None:intergenic 45.0%
! AGTGCAGATGTGGATTGCAA+AGG + Chr7:18605040-18605059 MsG0780037052.01.T01:intron 45.0%
! GCAGGTATTGTGTTGGATTC+TGG + Chr7:18603896-18603915 MsG0780037052.01.T01:intron 45.0%
!! AAAAGCACTGGGTGTTCTTC+TGG - Chr7:18603150-18603169 None:intergenic 45.0%
!! AAAGCACTGGGTGTTCTTCT+GGG - Chr7:18603149-18603168 None:intergenic 45.0%
!! ACACCCAGTGCTTTTAACTG+AGG + Chr7:18603155-18603174 MsG0780037052.01.T01:CDS 45.0%
!! ATCTTCTCACGATTGGCCTT+AGG - Chr7:18603192-18603211 None:intergenic 45.0%
!! CAGCTTAGAAGCACTTTCTG+TGG - Chr7:18605097-18605116 None:intergenic 45.0%
!! GAGCCTCAGTTAAAAGCACT+GGG - Chr7:18603161-18603180 None:intergenic 45.0%
!! TCTTCTCACGATTGGCCTTA+GGG - Chr7:18603191-18603210 None:intergenic 45.0%
!! TCTTTTCAGGCTGGATTTGC+TGG + Chr7:18602901-18602920 MsG0780037052.01.T01:intron 45.0%
!!! AATCATTTTTTATTTTTATT+TGG + Chr7:18601565-18601584 MsG0780037052.01.T01:intron 5.0%
!!! TATAATTTTTATTTTATCAA+CGG - Chr7:18603469-18603488 None:intergenic 5.0%
AAGGAAAATGCCGAGGGTGA+TGG - Chr7:18601027-18601046 None:intergenic 50.0%
AATTTCTCGCTCTGCTGAGG+TGG - Chr7:18604056-18604075 None:intergenic 50.0%
ACGAAGGATGGCATGTGGAA+GGG - Chr7:18603963-18603982 None:intergenic 50.0%
ACTGGTGTGATGGTTGGCAT+GGG + Chr7:18602976-18602995 MsG0780037052.01.T01:CDS 50.0%
AGACGAGCGTTTCAGATGTC+CGG + Chr7:18604204-18604223 MsG0780037052.01.T01:CDS 50.0%
AGCCAGATCAAGACGAAGGA+TGG - Chr7:18603975-18603994 None:intergenic 50.0%
AGGGCATAACCCTCGTAGAT+AGG - Chr7:18603944-18603963 None:intergenic 50.0%
ATCCTTCGTCTTGATCTGGC+TGG + Chr7:18603974-18603993 MsG0780037052.01.T01:CDS 50.0%
ATCTCTTAGCACCTTCCAGC+AGG + Chr7:18604492-18604511 MsG0780037052.01.T01:CDS 50.0%
ATGGTGATCACCTGTCCATC+AGG - Chr7:18604181-18604200 None:intergenic 50.0%
CCATACTGTCCCTATCTACG+AGG + Chr7:18603931-18603950 MsG0780037052.01.T01:CDS 50.0%
CCTCGTAGATAGGGACAGTA+TGG - Chr7:18603934-18603953 None:intergenic 50.0%
CGAGCTCTTGCTCATAGTCA+AGG - Chr7:18604114-18604133 None:intergenic 50.0%
CTCATTCTGTCAGCAATGCC+TGG - Chr7:18604373-18604392 None:intergenic 50.0%
GATGAGGCACAGTCTAAGAG+GGG + Chr7:18603021-18603040 MsG0780037052.01.T01:CDS 50.0%
GATGGACAGGTGATCACCAT+CGG + Chr7:18604181-18604200 MsG0780037052.01.T01:CDS 50.0%
GCTGTGTTTCCCAGCATTGT+AGG + Chr7:18602940-18602959 MsG0780037052.01.T01:CDS 50.0%
GGGCATAACCCTCGTAGATA+GGG - Chr7:18603943-18603962 None:intergenic 50.0%
GGTGCTAAGAGATGCCAAGA+TGG - Chr7:18604485-18604504 None:intergenic 50.0%
GTGATGAGGCACAGTCTAAG+AGG + Chr7:18603019-18603038 MsG0780037052.01.T01:CDS 50.0%
TCAAGACGAAGGATGGCATG+TGG - Chr7:18603968-18603987 None:intergenic 50.0%
TCTTTGCCTTCCATCACCCT+CGG + Chr7:18601014-18601033 MsG0780037052.01.T01:five_prime_UTR 50.0%
TGCCATCCTTCGTCTTGATC+TGG + Chr7:18603970-18603989 MsG0780037052.01.T01:CDS 50.0%
! CTACGAATTGCCTGATGGAC+AGG + Chr7:18604168-18604187 MsG0780037052.01.T01:CDS 50.0%
! CTCGGCATTTTCCTTCCCAA+AGG + Chr7:18601032-18601051 MsG0780037052.01.T01:five_prime_UTR 50.0%
! CTGGATTGGAGGTTCCATCT+TGG + Chr7:18604468-18604487 MsG0780037052.01.T01:CDS 50.0%
! CTTTGGGAAGGAAAATGCCG+AGG - Chr7:18601034-18601053 None:intergenic 50.0%
! GAAGTGAGAGAGAGAGTGTG+TGG - Chr7:18600972-18600991 None:intergenic 50.0%
! GGAGCCTCAGTTAAAAGCAC+TGG - Chr7:18603162-18603181 None:intergenic 50.0%
!! AAAATGCCGAGGGTGATGGA+AGG - Chr7:18601023-18601042 None:intergenic 50.0%
!! AAGCACTGGGTGTTCTTCTG+GGG - Chr7:18603148-18603167 None:intergenic 50.0%
!! AGGGTGATGGAAGGCAAAGA+AGG - Chr7:18601014-18601033 None:intergenic 50.0%
ACCATCACACCAGTGTGACG+AGG - Chr7:18602970-18602989 None:intergenic 55.0%
ACGAGGACGACCTACAATGC+TGG - Chr7:18602953-18602972 None:intergenic 55.0%
ATGCTGGGAAACACAGCACG+AGG - Chr7:18602937-18602956 None:intergenic 55.0%
CACTGGTGTGATGGTTGGCA+TGG + Chr7:18602975-18602994 MsG0780037052.01.T01:CDS 55.0%
CGAGGACGACCTACAATGCT+GGG - Chr7:18602952-18602971 None:intergenic 55.0%
CGTCACACTGGTGTGATGGT+TGG + Chr7:18602970-18602989 MsG0780037052.01.T01:CDS 55.0%
CGTTAGCAACTGGGACGACA+TGG + Chr7:18603080-18603099 MsG0780037052.01.T01:CDS 55.0%
GACCAGCCAGATCAAGACGA+AGG - Chr7:18603979-18603998 None:intergenic 55.0%
GACGAAGGATGGCATGTGGA+AGG - Chr7:18603964-18603983 None:intergenic 55.0%
GATGGTTGGAACAGGACCTC+CGG - Chr7:18604226-18604245 None:intergenic 55.0%
GGAGGAACAACCATGTTCCC+AGG + Chr7:18604352-18604371 MsG0780037052.01.T01:CDS 55.0%
GTAGAAGATGGCAGACGCTG+AGG + Chr7:18602350-18602369 MsG0780037052.01.T01:exon 55.0%
GTCAGCAATGCCTGGGAACA+TGG - Chr7:18604365-18604384 None:intergenic 55.0%
TCCTCGTCACACTGGTGTGA+TGG + Chr7:18602966-18602985 MsG0780037052.01.T01:CDS 55.0%
TGAGGCTCCTCTCAACCCTA+AGG + Chr7:18603173-18603192 MsG0780037052.01.T01:CDS 55.0%
TGCTGGGAAACACAGCACGA+GGG - Chr7:18602936-18602955 None:intergenic 55.0%
! TCTGAAACGCTCGTCTCCGA+TGG - Chr7:18604200-18604219 None:intergenic 55.0%
!! CGATTGGCCTTAGGGTTGAG+AGG - Chr7:18603183-18603202 None:intergenic 55.0%
AGCAAGAGCTCGAGACAGCC+AGG + Chr7:18604122-18604141 MsG0780037052.01.T01:CDS 60.0%
CGAGCGTTTCAGATGTCCGG+AGG + Chr7:18604207-18604226 MsG0780037052.01.T01:CDS 60.0%
CTTACCGGTGGTACGACCAC+TGG - Chr7:18603289-18603308 None:intergenic 60.0%
GCTCTTCTCGACGGATGAGC+TGG - Chr7:18604149-18604168 None:intergenic 60.0%
GCTGGGAAACACAGCACGAG+GGG - Chr7:18602935-18602954 None:intergenic 60.0%
GTAGGTCGTCCTCGTCACAC+TGG + Chr7:18602958-18602977 MsG0780037052.01.T01:CDS 60.0%
TACGCCAGTGGTCGTACCAC+CGG + Chr7:18603282-18603301 MsG0780037052.01.T01:CDS 60.0%
CTCGACGGATGAGCTGGTCC+TGG - Chr7:18604143-18604162 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 18600816 18605431 18600816 ID=MsG0780037052.01;Name=MsG0780037052.01
Chr7 mRNA 18600816 18605431 18600816 ID=MsG0780037052.01.T01;Parent=MsG0780037052.01;Name=MsG0780037052.01.T01;_AED=0.32;_eAED=0.32;_QI=248|1|1|1|0.75|0.6|5|319|377
Chr7 exon 18600816 18601053 18600816 ID=MsG0780037052.01.T01:exon:2990;Parent=MsG0780037052.01.T01
Chr7 exon 18602347 18602416 18602347 ID=MsG0780037052.01.T01:exon:2991;Parent=MsG0780037052.01.T01
Chr7 exon 18602910 18603303 18602910 ID=MsG0780037052.01.T01:exon:2992;Parent=MsG0780037052.01.T01
Chr7 exon 18603900 18604513 18603900 ID=MsG0780037052.01.T01:exon:2993;Parent=MsG0780037052.01.T01
Chr7 exon 18605047 18605431 18605047 ID=MsG0780037052.01.T01:exon:2994;Parent=MsG0780037052.01.T01
Chr7 five_prime_UTR 18600816 18601053 18600816 ID=MsG0780037052.01.T01:five_prime_utr;Parent=MsG0780037052.01.T01
Chr7 five_prime_UTR 18602347 18602356 18602347 ID=MsG0780037052.01.T01:five_prime_utr;Parent=MsG0780037052.01.T01
Chr7 CDS 18602357 18602416 18602357 ID=MsG0780037052.01.T01:cds;Parent=MsG0780037052.01.T01
Chr7 CDS 18602910 18603303 18602910 ID=MsG0780037052.01.T01:cds;Parent=MsG0780037052.01.T01
Chr7 CDS 18603900 18604513 18603900 ID=MsG0780037052.01.T01:cds;Parent=MsG0780037052.01.T01
Chr7 CDS 18605047 18605112 18605047 ID=MsG0780037052.01.T01:cds;Parent=MsG0780037052.01.T01
Chr7 three_prime_UTR 18605113 18605431 18605113 ID=MsG0780037052.01.T01:three_prime_utr;Parent=MsG0780037052.01.T01
Gene Sequence

>MsG0780037052.01.T01

ATGGCAGACGCTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACTGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCCCCTCGTGCTGTGTTTCCCAGCATTGTAGGTCGTCCTCGTCACACTGGTGTGATGGTTGGCATGGGTCAAAAAGATGCATATGTTGGTGATGAGGCACAGTCTAAGAGGGGTATTTTGACTCTCAAATACCCCATTGAACATGGAATCGTTAGCAACTGGGACGACATGGAAAAAATTTGGCATCACACCTTCTACAATGAGCTTCGTGTCGCCCCAGAAGAACACCCAGTGCTTTTAACTGAGGCTCCTCTCAACCCTAAGGCCAATCGTGAGAAGATGACTCAAATCATGTTTGAGACTTTTAATACCCCTGCCATGTATGTTGCTATTCAGGCCGTTCTTTCACTATACGCCAGTGGTCGTACCACCGGTATTGTGTTGGATTCTGGTGATGGTGTCAGCCATACTGTCCCTATCTACGAGGGTTATGCCCTTCCACATGCCATCCTTCGTCTTGATCTGGCTGGTCGCGATCTTACCGATTTCTTGATGAAGATTTTGACTGAACGTGGTTATTCTTTTACCACCTCAGCAGAGCGAGAAATTGTTCGTGACGTGAAAGAAAAGCTTTCATACATTGCCCTTGACTATGAGCAAGAGCTCGAGACAGCCAGGACCAGCTCATCCGTCGAGAAGAGCTACGAATTGCCTGATGGACAGGTGATCACCATCGGAGACGAGCGTTTCAGATGTCCGGAGGTCCTGTTCCAACCATCTATGATAGGAATGGAAGCAGCAGGCATTCACGAGACCACATACAACTCCATCATGAAGTGCGATGTTGATATCAGGAAAGACTTGTACGGTAACATTGTGCTTTCAGGAGGAACAACCATGTTCCCAGGCATTGCTGACAGAATGAGCAAGGAAATTTCTGCTTTGGCCCCAAGTAGCATGAAGATCAAGGTGGTTGCACCACCTGAGAGAAAATACAGTGTCTGGATTGGAGGTTCCATCTTGGCATCTCTTAGCACCTTCCAGCAGATGTGGATTGCAAAGGCAGAATATGATGAATCTGGTCCATCAATTGTCCACAGAAAGTGCTTCTAA

Protein sequence

>MsG0780037052.01.T01

MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLMKILTERGYSFTTSAEREIVRDVKEKLSYIALDYEQELETARTSSSVEKSYELPDGQVITIGDERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF*