AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028914.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028914.01.T01 MTR_5g077840 95.545 404 17 1 4 406 56 459 0.0 781
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028914.01.T01 AT5G37530 79.284 391 80 1 15 404 65 455 0.0 634
MsG0580028914.01.T01 AT5G37530 79.284 391 80 1 15 404 64 454 0.0 634

Find 102 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTAAACTGCTTCCCTTTA+AGG 0.122879 5:+88566116 MsG0580028914.01.T01:CDS
TTCTCCACTTGGACCCTTAA+AGG 0.156880 5:-88566130 None:intergenic
GGCACCATCCCTGCAATATT+TGG 0.184351 5:+88566471 MsG0580028914.01.T01:CDS
GCTACTGCTGATGAATTAAA+TGG 0.246378 5:+88559517 MsG0580028914.01.T01:five_prime_UTR
CATCATATGTTTGTGGTCAT+TGG 0.319811 5:+88561828 MsG0580028914.01.T01:CDS
GTTAAACTGCTTCCCTTTAA+GGG 0.331829 5:+88566117 MsG0580028914.01.T01:CDS
AGTATATTGCTAAAGAATTA+TGG 0.342122 5:+88567750 MsG0580028914.01.T01:CDS
AACATTACCGATCGAGATAA+TGG 0.363312 5:-88563353 None:intergenic
ATGTCTCCTCATGCTCAATA+AGG 0.363849 5:-88566599 None:intergenic
GGAAAACCCTTCAGACTATC+AGG 0.373502 5:+88566155 MsG0580028914.01.T01:CDS
ACTTTGGATTATGACATTAG+AGG 0.377422 5:+88569709 MsG0580028914.01.T01:exon
TCTCCACTTGGACCCTTAAA+GGG 0.379463 5:-88566129 None:intergenic
AAAGGGAAGCAGTTTAACTT+TGG 0.379760 5:-88566112 None:intergenic
TTGAAGGTTCTATCTGCCAC+TGG 0.383229 5:+88563266 MsG0580028914.01.T01:CDS
AAACAAGCTGAAAATGACTT+TGG 0.385221 5:+88569693 MsG0580028914.01.T01:CDS
CAAAAGAATCAAATTAGAAA+TGG 0.389709 5:-88568818 None:intergenic
AAGGGAAGCAGTTTAACTTT+GGG 0.392082 5:-88566111 None:intergenic
GTCCGTATCATACCTGTTCT+AGG 0.395244 5:+88566450 MsG0580028914.01.T01:CDS
ATGTTTGTGGTCATTGGTCT+TGG 0.396425 5:+88561834 MsG0580028914.01.T01:CDS
GTTCTATCTGCCACTGGGGC+TGG 0.398346 5:+88563272 MsG0580028914.01.T01:CDS
CATGGAGCGAAGCAAATGTT+TGG 0.400140 5:+88559297 MsG0580028914.01.T01:five_prime_UTR
TAAGGCGTTGATGAAGAATA+TGG 0.400338 5:-88566581 None:intergenic
CTCAAAAGCTCAGTGCCTTA+AGG 0.405270 5:+88562925 MsG0580028914.01.T01:CDS
GTCATTGGTCTTGGAGGTGT+TGG 0.406567 5:+88561843 MsG0580028914.01.T01:CDS
TGCAGGTAAGACACCGTCTA+AGG 0.414231 5:+88566037 MsG0580028914.01.T01:intron
GCTTCTATGCTATTGAGATC+AGG 0.426588 5:+88561875 MsG0580028914.01.T01:CDS
ATGACTTGTCCAAATATTGC+AGG 0.429708 5:-88566480 None:intergenic
ATGTGTACGTAGGGGCTTGA+AGG 0.448817 5:+88563250 MsG0580028914.01.T01:CDS
AAGCAAATGTTTGGTTTGGT+TGG 0.449946 5:+88559306 MsG0580028914.01.T01:five_prime_UTR
ACAAGACAGCCTCCGATGTC+AGG 0.453766 5:+88559232 None:intergenic
CAAATGTTTGGTTTGGTTGG+AGG 0.454688 5:+88559309 MsG0580028914.01.T01:five_prime_UTR
GCAGGGATGGTGCCTAGAAC+AGG 0.459263 5:-88566462 None:intergenic
TTGATGAGAAATGCTCCTTA+AGG 0.462220 5:-88562940 None:intergenic
TGTAGTGTTGCATGTCTAAT+AGG 0.468884 5:+88569755 MsG0580028914.01.T01:three_prime_UTR
ATACAGTCGAGGACAAAGTC+AGG 0.471462 5:-88563037 None:intergenic
AGGAAAGATCATGGCATTGA+TGG 0.475499 5:+88566057 MsG0580028914.01.T01:CDS
AGCGAAGCAAATGTTTGGTT+TGG 0.476446 5:+88559302 MsG0580028914.01.T01:five_prime_UTR
TTTGCATCTATTTGACACTC+TGG 0.477494 5:-88562968 None:intergenic
ATGTTTGGTTTGGTTGGAGG+TGG 0.488719 5:+88559312 MsG0580028914.01.T01:five_prime_UTR
GAGTTTGAGAAGAAAGAAAG+TGG 0.490107 5:-88559355 None:intergenic
ATTGGATGATGTAAAAGAAA+AGG 0.490721 5:+88569635 MsG0580028914.01.T01:CDS
TCTTGCTGCATGTGTACGTA+GGG 0.492701 5:+88563241 MsG0580028914.01.T01:CDS
TGAAGGTTCTATCTGCCACT+GGG 0.495632 5:+88563267 MsG0580028914.01.T01:CDS
GATCGGAAAGCTTCTTCTTG+TGG 0.496882 5:+88561898 MsG0580028914.01.T01:CDS
TAGGTGGGACAGTACGAAAC+CGG 0.500120 5:+88568792 MsG0580028914.01.T01:intron
TAGCTGGAAAGAAGAGTGTA+AGG 0.504382 5:+88561043 MsG0580028914.01.T01:CDS
TTTGTGGTCATTGGTCTTGG+AGG 0.505881 5:+88561837 MsG0580028914.01.T01:CDS
TCCATATCAAAATTTACTAC+AGG 0.506608 5:-88566552 None:intergenic
TGCCATGATCTTTCCTTAGA+CGG 0.513121 5:-88566050 None:intergenic
GTTGACAGATGCACTATAGC+TGG 0.514010 5:+88561027 MsG0580028914.01.T01:exon
CGGAACTTCCATGCATGTGC+AGG 0.515237 5:+88566626 MsG0580028914.01.T01:CDS
TGGCTTTGAATCACAACAGA+AGG 0.521703 5:+88561799 MsG0580028914.01.T01:CDS
TTGTTTCTGAACAGCTGACT+AGG 0.524566 5:+88561096 MsG0580028914.01.T01:CDS
TGCAATATTTGGACAAGTCA+TGG 0.525062 5:+88566482 MsG0580028914.01.T01:CDS
GTGAGTTCATCATATGTTTG+TGG 0.530237 5:+88561821 MsG0580028914.01.T01:CDS
GAGCATGAGGAGACATTGTA+CGG 0.540313 5:+88566606 MsG0580028914.01.T01:CDS
CTTCTATGCTATTGAGATCA+GGG 0.543366 5:+88561876 MsG0580028914.01.T01:CDS
TGGAAGAAGTGCTAGAGAGC+AGG 0.543980 5:+88567775 MsG0580028914.01.T01:CDS
GATTTATACCTGCACATGCA+TGG 0.544513 5:-88566634 None:intergenic
ATCAAATTAGAAATGGATGC+CGG 0.550764 5:-88568811 None:intergenic
TCAACTGAAGAAGAACTCTC+AGG 0.555907 5:+88563010 MsG0580028914.01.T01:CDS
ACTATAACTATTCCACTTGG+TGG 0.555987 5:+88569732 MsG0580028914.01.T01:three_prime_UTR
TGCTAAATCCGTCAAAACAT+AGG 0.559301 5:-88566508 None:intergenic
TCAGCAATGCGTATTCTCGT+TGG 0.560325 5:-88563308 None:intergenic
GGTTGCGAAAGACGTTGGAC+GGG 0.565609 5:+88567796 MsG0580028914.01.T01:CDS
AGGTTGCGAAAGACGTTGGA+CGG 0.565975 5:+88567795 MsG0580028914.01.T01:CDS
TAATGATCCATTATCTCGAT+CGG 0.568568 5:+88563346 MsG0580028914.01.T01:CDS
GAGCAGGTTGCGAAAGACGT+TGG 0.571065 5:+88567791 MsG0580028914.01.T01:CDS
TAAGGGTCCAAGTGGAGAAG+AGG 0.577349 5:+88566134 MsG0580028914.01.T01:CDS
TGAGCATGAGTCACGGACAT+TGG 0.578240 5:+88569617 MsG0580028914.01.T01:CDS
GAAATCACCTGATAGTCTGA+AGG 0.582280 5:-88566162 None:intergenic
ATCACTCTACTGTAAAACTC+TGG 0.585148 5:-88569660 None:intergenic
CACCGTCTAAGGAAAGATCA+TGG 0.587229 5:+88566048 MsG0580028914.01.T01:CDS
TCAACGCCTTATTGAGCATG+AGG 0.591670 5:+88566593 MsG0580028914.01.T01:CDS
TGCCTAGAACAGGTATGATA+CGG 0.591720 5:-88566452 None:intergenic
TTCTTGCTGCATGTGTACGT+AGG 0.597754 5:+88563240 MsG0580028914.01.T01:CDS
TATTGATAACATTGATACAA+AGG 0.607266 5:+88563057 MsG0580028914.01.T01:CDS
AAATCACCTGATAGTCTGAA+GGG 0.609240 5:-88566161 None:intergenic
CTCTGTTGGCCTGACATCGG+AGG 0.611110 5:-88559241 None:intergenic
ATTGCTAAAGAATTATGGCA+TGG 0.615056 5:+88567755 MsG0580028914.01.T01:CDS
TAACTCTGTTGGCCTGACAT+CGG 0.615968 5:-88559244 None:intergenic
ATGATACGGACCCTAAAACC+TGG 0.616259 5:-88566438 None:intergenic
GTTGCGACAAGAGCAGATGT+TGG 0.616352 5:+88562899 MsG0580028914.01.T01:CDS
TTGTCCAAATATTGCAGGGA+TGG 0.619227 5:-88566475 None:intergenic
CTGGAAAGAAGAGTGTAAGG+TGG 0.625817 5:+88561046 MsG0580028914.01.T01:CDS
AAAGATCATGGCATTGATGG+TGG 0.626212 5:+88566060 MsG0580028914.01.T01:CDS
AGGACTATAACTATTCCACT+TGG 0.629743 5:+88569729 MsG0580028914.01.T01:three_prime_UTR
TAAATCCGTCAAAACATAGG+AGG 0.632594 5:-88566505 None:intergenic
TGCAACACTACACCACCAAG+TGG 0.638777 5:-88569744 None:intergenic
TGACTTGTCCAAATATTGCA+GGG 0.641613 5:-88566479 None:intergenic
ATGCTATTGAGATCAGGGAT+CGG 0.642054 5:+88561881 MsG0580028914.01.T01:CDS
TACAGTCGAGGACAAAGTCA+GGG 0.644701 5:-88563036 None:intergenic
AGCTCTAGCACCAGCCCCAG+TGG 0.652736 5:-88563282 None:intergenic
AGGTGGATGAGCATGAGTCA+CGG 0.655267 5:+88569610 MsG0580028914.01.T01:intron
CTTCCCTTTAAGGGTCCAAG+TGG 0.657885 5:+88566126 MsG0580028914.01.T01:CDS
TTAATGAATTGATGCTTGTG+AGG 0.664450 5:+88567834 MsG0580028914.01.T01:CDS
CTTGCTGCATGTGTACGTAG+GGG 0.674097 5:+88563242 MsG0580028914.01.T01:CDS
CAATGTTATCAATACAGTCG+AGG 0.674794 5:-88563048 None:intergenic
AAGACGTTGGACGGGCAATG+TGG 0.678107 5:+88567804 MsG0580028914.01.T01:CDS
TTTCTAAAGAAAACACAACA+GGG 0.688114 5:-88566086 None:intergenic
GAAGGTTCTATCTGCCACTG+GGG 0.721240 5:+88563268 MsG0580028914.01.T01:CDS
AGTCGAGGACAAAGTCAGGG+TGG 0.752059 5:-88563033 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAATTAA+AGG - Chr5:88559415-88559434 None:intergenic 0.0%
!! GTAAATATATTATCTATTTA+TGG - Chr5:88569553-88569572 None:intergenic 10.0%
!! TATTGCTATAAAATAAAATT+TGG + Chr5:88569014-88569033 MsG0580028914.01.T01:intron 10.0%
!! TATTTATTTATTAAATGAGA+AGG + Chr5:88562847-88562866 MsG0580028914.01.T01:intron 10.0%
!! TTAAATTATGTTTATGTATA+TGG + Chr5:88564159-88564178 MsG0580028914.01.T01:intron 10.0%
!!! ATAATTGATAAATTTTATGT+AGG + Chr5:88565776-88565795 MsG0580028914.01.T01:intron 10.0%
!!! ATTATAACTGTTAAATTTTT+TGG + Chr5:88569801-88569820 MsG0580028914.01.T01:three_prime_UTR 10.0%
!!! ATTTATTCTTTATTGATTAT+TGG - Chr5:88564722-88564741 None:intergenic 10.0%
!!! CTTTAAACTATTTATATTTT+GGG + Chr5:88561678-88561697 MsG0580028914.01.T01:intron 10.0%
!!! TTAAAATAGAAATTTTATCT+TGG - Chr5:88565845-88565864 None:intergenic 10.0%
!! AAATTTCCCTATAAAAATAA+AGG - Chr5:88561262-88561281 None:intergenic 15.0%
!! AAGAAAAATTAAACATTATC+AGG - Chr5:88561958-88561977 None:intergenic 15.0%
!! AGAAAAATTAAACATTATCA+GGG - Chr5:88561957-88561976 None:intergenic 15.0%
!! ATTTAAACTTTAGATTAACT+AGG + Chr5:88565526-88565545 MsG0580028914.01.T01:intron 15.0%
!! CCAAAATATAAATAGTTTAA+AGG - Chr5:88561680-88561699 None:intergenic 15.0%
!! CTGAATAAAATATTTGAAAA+AGG + Chr5:88560401-88560420 MsG0580028914.01.T01:intron 15.0%
!! GTAAAATAATTGATAAGATA+AGG - Chr5:88562071-88562090 None:intergenic 15.0%
!! TTGTTAATTGTAAATGTTAA+AGG + Chr5:88560277-88560296 MsG0580028914.01.T01:intron 15.0%
!! TTTAAACTTTAGATTAACTA+GGG + Chr5:88565527-88565546 MsG0580028914.01.T01:intron 15.0%
!!! AAAGGATAGTTTATTTTAAA+GGG + Chr5:88569222-88569241 MsG0580028914.01.T01:intron 15.0%
!!! AAATTAGGAAAAATTCATTT+TGG - Chr5:88569462-88569481 None:intergenic 15.0%
!!! AAATTATGAGAAATGTTTTT+TGG + Chr5:88569264-88569283 MsG0580028914.01.T01:intron 15.0%
!!! AATTTTGTAACTATAAATGA+AGG + Chr5:88560003-88560022 MsG0580028914.01.T01:intron 15.0%
!!! AGGTTCTTTTAAAAAAAATT+AGG + Chr5:88566725-88566744 MsG0580028914.01.T01:intron 15.0%
!!! ATTCACTTAATTTTGTAAAT+CGG + Chr5:88567429-88567448 MsG0580028914.01.T01:intron 15.0%
!!! ATTTTCCTTTAAAATAATAG+TGG + Chr5:88565900-88565919 MsG0580028914.01.T01:intron 15.0%
!!! CACAATTTTTGTATTTTTTT+AGG - Chr5:88569372-88569391 None:intergenic 15.0%
!!! CCTTTAAACTATTTATATTT+TGG + Chr5:88561677-88561696 MsG0580028914.01.T01:intron 15.0%
!!! CTTTTTCAAATATTTTATTC+AGG - Chr5:88560403-88560422 None:intergenic 15.0%
!!! GAATTTTTCCTAATTTTATA+GGG + Chr5:88569466-88569485 MsG0580028914.01.T01:intron 15.0%
!!! GATTCTATTTTGTTTATTAT+AGG + Chr5:88567709-88567728 MsG0580028914.01.T01:intron 15.0%
!!! TAAAGGATAGTTTATTTTAA+AGG + Chr5:88569221-88569240 MsG0580028914.01.T01:intron 15.0%
!!! TAGTTAATCTAAAGTTTAAA+TGG - Chr5:88565527-88565546 None:intergenic 15.0%
!!! TATAGAAGACTTTTTTTTTT+TGG + Chr5:88560849-88560868 MsG0580028914.01.T01:intron 15.0%
!!! TGAATTTTTCCTAATTTTAT+AGG + Chr5:88569465-88569484 MsG0580028914.01.T01:intron 15.0%
!! AAAAATTAAACATTATCAGG+GGG - Chr5:88561955-88561974 None:intergenic 20.0%
!! AACAAACTAATAAATACTTC+AGG + Chr5:88564948-88564967 MsG0580028914.01.T01:intron 20.0%
!! AAGTTAAACATTGACATTTA+GGG - Chr5:88559883-88559902 None:intergenic 20.0%
!! AATATTCTATTATAAAACGG+AGG - Chr5:88563682-88563701 None:intergenic 20.0%
!! AATCTGTTATCAATTATGAA+TGG - Chr5:88565364-88565383 None:intergenic 20.0%
!! AATTAATGTGCTCTATTATT+TGG + Chr5:88563847-88563866 MsG0580028914.01.T01:intron 20.0%
!! ACAAACTGTAATATTATGTA+TGG + Chr5:88563496-88563515 MsG0580028914.01.T01:intron 20.0%
!! ACAAATAGATATTTATTACC+TGG - Chr5:88569580-88569599 None:intergenic 20.0%
!! ACTAAATGTTATGATAACAA+AGG - Chr5:88566371-88566390 None:intergenic 20.0%
!! AGTATATTGCTAAAGAATTA+TGG + Chr5:88567750-88567769 MsG0580028914.01.T01:CDS 20.0%
!! ATAAATTTGAAAATCCTTCT+TGG - Chr5:88565668-88565687 None:intergenic 20.0%
!! ATATAAAAAAGCTCAATTTC+TGG - Chr5:88567601-88567620 None:intergenic 20.0%
!! ATATTATCTATTTATGGTAG+TGG - Chr5:88569547-88569566 None:intergenic 20.0%
!! ATATTCTATTATAAAACGGA+GGG - Chr5:88563681-88563700 None:intergenic 20.0%
!! ATGTAAATTCAAAAGTCTAT+CGG - Chr5:88564494-88564513 None:intergenic 20.0%
!! ATTAACAAAATATCAGCTTT+AGG - Chr5:88560265-88560284 None:intergenic 20.0%
!! ATTATCAATTCGGATTAAAA+AGG - Chr5:88560626-88560645 None:intergenic 20.0%
!! CAAAAGAATCAAATTAGAAA+TGG - Chr5:88568821-88568840 None:intergenic 20.0%
!! CCAAATAGTAAAAGTAAAAA+TGG - Chr5:88560329-88560348 None:intergenic 20.0%
!! CTTAATTGTATAAAGCAAAA+GGG - Chr5:88566799-88566818 None:intergenic 20.0%
!! GAAAAATTAAACATTATCAG+GGG - Chr5:88561956-88561975 None:intergenic 20.0%
!! GATAATATATTTACTTTACC+AGG + Chr5:88569559-88569578 MsG0580028914.01.T01:intron 20.0%
!! GGGAATATTCTATTATAAAA+CGG - Chr5:88563685-88563704 None:intergenic 20.0%
!! TAAATGTTAAAGGTTCTATT+TGG + Chr5:88560287-88560306 MsG0580028914.01.T01:intron 20.0%
!! TAAGTTAAACATTGACATTT+AGG - Chr5:88559884-88559903 None:intergenic 20.0%
!! TAGACTATGATAAATGATAA+AGG + Chr5:88564071-88564090 MsG0580028914.01.T01:intron 20.0%
!! TAGTTTCTTATTATTAGTAG+AGG + Chr5:88565184-88565203 MsG0580028914.01.T01:intron 20.0%
!! TCTTAATTGTATAAAGCAAA+AGG - Chr5:88566800-88566819 None:intergenic 20.0%
!! TGTAATATTATGTATGGAAA+AGG + Chr5:88563502-88563521 MsG0580028914.01.T01:intron 20.0%
!! TTAAACTTTAGATTAACTAG+GGG + Chr5:88565528-88565547 MsG0580028914.01.T01:intron 20.0%
!! TTAACAAAATATCAGCTTTA+GGG - Chr5:88560264-88560283 None:intergenic 20.0%
!! TTAATTGTATAAAGCAAAAG+GGG - Chr5:88566798-88566817 None:intergenic 20.0%
!! TTATCAATTCGGATTAAAAA+GGG - Chr5:88560625-88560644 None:intergenic 20.0%
!!! AGTTTGTTATCTTGATTTTA+CGG - Chr5:88563483-88563502 None:intergenic 20.0%
!!! ATCTGATTAGTTCTAAATAT+AGG - Chr5:88568975-88568994 None:intergenic 20.0%
!!! CCATTTTTACTTTTACTATT+TGG + Chr5:88560326-88560345 MsG0580028914.01.T01:intron 20.0%
!!! CTACTTAACAAACTTTTTTT+GGG + Chr5:88561738-88561757 MsG0580028914.01.T01:intron 20.0%
!!! GTGTATATTAATTGATTTAC+AGG - Chr5:88561290-88561309 None:intergenic 20.0%
!!! TAAATACTTCAGGTTATTAT+CGG + Chr5:88564958-88564977 MsG0580028914.01.T01:intron 20.0%
!!! TAACGATTTTTTTTTTGATG+AGG + Chr5:88567328-88567347 MsG0580028914.01.T01:intron 20.0%
!!! TAGTGTAAATCTATTTTACT+GGG + Chr5:88561516-88561535 MsG0580028914.01.T01:intron 20.0%
!!! TATGTTAGAGATAAGTTTTT+AGG - Chr5:88567502-88567521 None:intergenic 20.0%
!!! TATTGATAACATTGATACAA+AGG + Chr5:88563057-88563076 MsG0580028914.01.T01:CDS 20.0%
!!! TCATTTTCCATTTTCATTTA+TGG - Chr5:88560210-88560229 None:intergenic 20.0%
!!! TCTACTTAACAAACTTTTTT+TGG + Chr5:88561737-88561756 MsG0580028914.01.T01:intron 20.0%
!!! TGAAATCAAAAAGTGTTTTA+TGG + Chr5:88560227-88560246 MsG0580028914.01.T01:intron 20.0%
!!! TTAGTGTAAATCTATTTTAC+TGG + Chr5:88561515-88561534 MsG0580028914.01.T01:intron 20.0%
!!! TTCACTTAATTTTGTAAATC+GGG + Chr5:88567430-88567449 MsG0580028914.01.T01:intron 20.0%
!!! TTCTCTTCTTTTTTTTGTTT+AGG + Chr5:88568773-88568792 MsG0580028914.01.T01:intron 20.0%
!!! TTTTAGTAATTTGAACTATG+TGG + Chr5:88563907-88563926 MsG0580028914.01.T01:intron 20.0%
!!! TTTTTTAATCTAACAAGTCA+AGG - Chr5:88564573-88564592 None:intergenic 20.0%
! AAACAAAAAGATAACAGTGT+AGG - Chr5:88566659-88566678 None:intergenic 25.0%
! AAACCATAAAAAACAACTCA+AGG - Chr5:88568416-88568435 None:intergenic 25.0%
! AAATAAAAAACTGAGTGCAT+TGG + Chr5:88560705-88560724 MsG0580028914.01.T01:intron 25.0%
! AAATAAGGAGTTGAATTTAG+AGG - Chr5:88563086-88563105 None:intergenic 25.0%
! AAATAAGTACTAGCATTGTA+TGG - Chr5:88562832-88562851 None:intergenic 25.0%
! AACCTTAAAAACAACAAACA+TGG + Chr5:88559279-88559298 MsG0580028914.01.T01:five_prime_UTR 25.0%
! AAGACAAAAAAAATCTTCCA+TGG - Chr5:88565621-88565640 None:intergenic 25.0%
! AATCAAACATTCCTACTATT+TGG + Chr5:88560505-88560524 MsG0580028914.01.T01:intron 25.0%
! AATTGTGTATATGTTGACAT+CGG - Chr5:88567048-88567067 None:intergenic 25.0%
! ACCAACAAGAAAATTTATCT+AGG + Chr5:88569434-88569453 MsG0580028914.01.T01:intron 25.0%
! AGACAAAAAAAATCTTCCAT+GGG - Chr5:88565620-88565639 None:intergenic 25.0%
! AGAGAAAATGTCAAAATAAC+TGG - Chr5:88561137-88561156 None:intergenic 25.0%
! ATAGAAACACTAAATACCTA+AGG - Chr5:88564807-88564826 None:intergenic 25.0%
! ATCAAACATTCCTACTATTT+GGG + Chr5:88560506-88560525 MsG0580028914.01.T01:intron 25.0%
! ATGATAAATGATAAAGGTTC+TGG + Chr5:88564077-88564096 MsG0580028914.01.T01:intron 25.0%
! ATTCATCCAACAATTTCAAT+GGG - Chr5:88564517-88564536 None:intergenic 25.0%
! ATTGGATGATGTAAAAGAAA+AGG + Chr5:88569635-88569654 MsG0580028914.01.T01:CDS 25.0%
! CCAACAAGAAAATTTATCTA+GGG + Chr5:88569435-88569454 MsG0580028914.01.T01:intron 25.0%
! CCAACACTTAAATATTTCAT+AGG - Chr5:88562499-88562518 None:intergenic 25.0%
! CCTATGAAATATTTAAGTGT+TGG + Chr5:88562496-88562515 MsG0580028914.01.T01:intron 25.0%
! CTTGAGAATGTAATCAAATA+AGG - Chr5:88563101-88563120 None:intergenic 25.0%
! GAAAAACAGTTAAATGTCAA+TGG - Chr5:88568234-88568253 None:intergenic 25.0%
! GAATGTCAAATTGAAAGAAA+GGG + Chr5:88565496-88565515 MsG0580028914.01.T01:intron 25.0%
! GACAAAACCATAAATGAAAA+TGG + Chr5:88560200-88560219 MsG0580028914.01.T01:intron 25.0%
! GCTTAAGAAAAGTAACAAAT+TGG + Chr5:88562554-88562573 MsG0580028914.01.T01:intron 25.0%
! GGAGTAATATATATGAATAG+CGG + Chr5:88565075-88565094 MsG0580028914.01.T01:intron 25.0%
! GGTTCCATATTTAACAAAAA+TGG - Chr5:88569417-88569436 None:intergenic 25.0%
! GTCATATCCATAATGTTATT+TGG + Chr5:88562298-88562317 MsG0580028914.01.T01:intron 25.0%
! GTTTCAATCTTTCAAAGATT+TGG + Chr5:88560356-88560375 MsG0580028914.01.T01:intron 25.0%
! GTTTCTTTATGGATAATGAT+AGG - Chr5:88563785-88563804 None:intergenic 25.0%
! TAAACTGAAAAACTACTTGT+GGG + Chr5:88568944-88568963 MsG0580028914.01.T01:intron 25.0%
! TAATAGAGCACATTAATTGA+AGG - Chr5:88563845-88563864 None:intergenic 25.0%
! TAGAAACACTAAATACCTAA+GGG - Chr5:88564806-88564825 None:intergenic 25.0%
! TAGAATATTCCCTAAAATCA+CGG + Chr5:88563693-88563712 MsG0580028914.01.T01:intron 25.0%
! TATTCATCCAACAATTTCAA+TGG - Chr5:88564518-88564537 None:intergenic 25.0%
! TCCATATCAAAATTTACTAC+AGG - Chr5:88566555-88566574 None:intergenic 25.0%
! TCTTTGCAATAAATACTTGA+GGG - Chr5:88564915-88564934 None:intergenic 25.0%
! TGAATGTCAAATTGAAAGAA+AGG + Chr5:88565495-88565514 MsG0580028914.01.T01:intron 25.0%
! TGAGTGTTTAGTAATTAGTA+CGG - Chr5:88567082-88567101 None:intergenic 25.0%
! TTAAACTGAAAAACTACTTG+TGG + Chr5:88568943-88568962 MsG0580028914.01.T01:intron 25.0%
! TTAGAGATAATTATGTAGTC+AGG + Chr5:88561321-88561340 MsG0580028914.01.T01:intron 25.0%
! TTCAAATTACTAAAAAGCAG+AGG - Chr5:88563902-88563921 None:intergenic 25.0%
! TTCTTCGTTTATGTTCTTTA+TGG + Chr5:88561973-88561992 MsG0580028914.01.T01:intron 25.0%
! TTGAACAAATTACCAAAAGA+GGG + Chr5:88569056-88569075 MsG0580028914.01.T01:intron 25.0%
! TTTAACAAAAATGGTGTGTT+TGG - Chr5:88569408-88569427 None:intergenic 25.0%
! TTTACTTGTCTCAAAATTGT+TGG - Chr5:88566832-88566851 None:intergenic 25.0%
! TTTATTGCAAAGAGAGAAAT+AGG + Chr5:88564922-88564941 MsG0580028914.01.T01:intron 25.0%
!! AGTGTCTTTTATCAACAAAA+AGG - Chr5:88567115-88567134 None:intergenic 25.0%
!! ATCAGATAATCAAGAGTTTT+AGG - Chr5:88563455-88563474 None:intergenic 25.0%
!! GTATGGCTTTTGTTAAAATT+AGG - Chr5:88567394-88567413 None:intergenic 25.0%
!! TTTCTAAAGAAAACACAACA+GGG - Chr5:88566089-88566108 None:intergenic 25.0%
!! TTTTCCATCCCTATAAAATT+AGG - Chr5:88569477-88569496 None:intergenic 25.0%
!! TTTTCCTAATTTTATAGGGA+TGG + Chr5:88569470-88569489 MsG0580028914.01.T01:intron 25.0%
!! TTTTCTTGTTAACCAATGTA+AGG + Chr5:88562164-88562183 MsG0580028914.01.T01:intron 25.0%
!!! ACCTGTAGTAAATTTTGATA+TGG + Chr5:88566551-88566570 MsG0580028914.01.T01:CDS 25.0%
!!! ATATTGACCACAAGTTTTTT+AGG - Chr5:88562714-88562733 None:intergenic 25.0%
!!! CACACCATTTTTGTTAAATA+TGG + Chr5:88569410-88569429 MsG0580028914.01.T01:intron 25.0%
!!! CATTGATTCAATTTTACTGT+GGG + Chr5:88561451-88561470 MsG0580028914.01.T01:intron 25.0%
!!! CTTCTTTTTTTTGTTTAGGT+GGG + Chr5:88568777-88568796 MsG0580028914.01.T01:intron 25.0%
!!! GCAAAATAGTGTGTTTTTAT+TGG - Chr5:88561546-88561565 None:intergenic 25.0%
!!! GTTTGTTATCTTGATTTTAC+GGG - Chr5:88563482-88563501 None:intergenic 25.0%
!!! TAACAAATTGGAGTTTTGAT+TGG + Chr5:88562566-88562585 MsG0580028914.01.T01:intron 25.0%
!!! TAACAACCATTTTTTTTCCT+GGG + Chr5:88565472-88565491 MsG0580028914.01.T01:intron 25.0%
!!! TCATTGATTCAATTTTACTG+TGG + Chr5:88561450-88561469 MsG0580028914.01.T01:intron 25.0%
!!! TCTTCTTTTTTTTGTTTAGG+TGG + Chr5:88568776-88568795 MsG0580028914.01.T01:intron 25.0%
!!! TTAACAACCATTTTTTTTCC+TGG + Chr5:88565471-88565490 MsG0580028914.01.T01:intron 25.0%
!!! TTAAGTGTTGGAATGTATAA+CGG + Chr5:88562508-88562527 MsG0580028914.01.T01:intron 25.0%
!!! TTGGACAAGAATTGTTTTTT+TGG + Chr5:88560375-88560394 MsG0580028914.01.T01:intron 25.0%
!!! TTGTCGTTTTCAAACTTTAA+AGG + Chr5:88562013-88562032 MsG0580028914.01.T01:intron 25.0%
!!! TTTTAAAAGAACCTCTAGAA+AGG - Chr5:88566719-88566738 None:intergenic 25.0%
!!! TTTTCTAAAGAAAACACAAC+AGG - Chr5:88566090-88566109 None:intergenic 25.0%
AAACAAGCTGAAAATGACTT+TGG + Chr5:88569693-88569712 MsG0580028914.01.T01:CDS 30.0%
AAAGCCATACTTAAATCTAC+TGG + Chr5:88567404-88567423 MsG0580028914.01.T01:intron 30.0%
AAATTTAGTACATCTAGTGC+AGG + Chr5:88560738-88560757 MsG0580028914.01.T01:intron 30.0%
AACAGTCACAAAATAGATAG+CGG - Chr5:88566219-88566238 None:intergenic 30.0%
AACATGTATTACTGGTAAAC+AGG - Chr5:88565281-88565300 None:intergenic 30.0%
AATAACTCTCACTCAATGTA+TGG + Chr5:88563149-88563168 MsG0580028914.01.T01:intron 30.0%
AATATTGTAGAGTGAATCCT+AGG + Chr5:88560545-88560564 MsG0580028914.01.T01:intron 30.0%
AATTACTAAAAAGCAGAGGA+TGG - Chr5:88563898-88563917 None:intergenic 30.0%
ACACAAATTCGACACTTAAA+AGG - Chr5:88560996-88561015 None:intergenic 30.0%
ACTGTAATGCATGACATTAT+AGG + Chr5:88562673-88562692 MsG0580028914.01.T01:intron 30.0%
ACTTTGGATTATGACATTAG+AGG + Chr5:88569709-88569728 MsG0580028914.01.T01:exon 30.0%
AGAAGGTTGAGTATTAACTT+AGG + Chr5:88569140-88569159 MsG0580028914.01.T01:intron 30.0%
AGCAGAATTTCATAATGCAA+AGG + Chr5:88562739-88562758 MsG0580028914.01.T01:intron 30.0%
AGTATAAAAATACAGTGTCG+AGG - Chr5:88569302-88569321 None:intergenic 30.0%
AGTGCAGGTATTTGTATTAA+CGG + Chr5:88560753-88560772 MsG0580028914.01.T01:intron 30.0%
ATAAAAATAAAGGAGCTCGT+GGG - Chr5:88561252-88561271 None:intergenic 30.0%
ATATTGTAGAGTGAATCCTA+GGG + Chr5:88560546-88560565 MsG0580028914.01.T01:intron 30.0%
ATCAAATTAGAAATGGATGC+CGG - Chr5:88568814-88568833 None:intergenic 30.0%
ATCACTTATTGTGCAAAAGA+AGG + Chr5:88569123-88569142 MsG0580028914.01.T01:intron 30.0%
ATCATAACATTTAGTCGCAT+TGG + Chr5:88566376-88566395 MsG0580028914.01.T01:intron 30.0%
ATCTAATAAATATGCCGAAG+AGG - Chr5:88564044-88564063 None:intergenic 30.0%
ATCTATTTGTCTGCTCTATT+AGG + Chr5:88569590-88569609 MsG0580028914.01.T01:intron 30.0%
ATGGAGGCTAAATCTTATAA+AGG + Chr5:88569204-88569223 MsG0580028914.01.T01:intron 30.0%
ATTACTGGTAAACAGGTAAT+GGG - Chr5:88565274-88565293 None:intergenic 30.0%
ATTATTAGTAGAGGAATGCT+AGG + Chr5:88565193-88565212 MsG0580028914.01.T01:intron 30.0%
ATTGCCAGTAGATTTAAGTA+TGG - Chr5:88567411-88567430 None:intergenic 30.0%
ATTGCTAAAGAATTATGGCA+TGG + Chr5:88567755-88567774 MsG0580028914.01.T01:CDS 30.0%
CATTCTTGATCTCTTTCATT+TGG + Chr5:88568726-88568745 MsG0580028914.01.T01:intron 30.0%
CCTATAACACATAACATATC+AGG - Chr5:88563214-88563233 None:intergenic 30.0%
CCTGATATGTTATGTGTTAT+AGG + Chr5:88563211-88563230 MsG0580028914.01.T01:intron 30.0%
CTCTTTGCAATAAATACTTG+AGG - Chr5:88564916-88564935 None:intergenic 30.0%
CTTATGAAAGTGAGATTATG+TGG + Chr5:88561594-88561613 MsG0580028914.01.T01:intron 30.0%
CTTCGGCATATTTATTAGAT+TGG + Chr5:88564044-88564063 MsG0580028914.01.T01:intron 30.0%
CTTGATCGTTATTTATGACT+TGG + Chr5:88564465-88564484 MsG0580028914.01.T01:intron 30.0%
GACAAAAAAAATCTTCCATG+GGG - Chr5:88565619-88565638 None:intergenic 30.0%
GAGATTATGTGGAAAAATAG+TGG + Chr5:88561605-88561624 MsG0580028914.01.T01:intron 30.0%
GATATGTTATGTGTTATAGG+TGG + Chr5:88563214-88563233 MsG0580028914.01.T01:intron 30.0%
GGAGAAATATTGTTAGAAGT+TGG - Chr5:88563638-88563657 None:intergenic 30.0%
GTAGAAAAAGTTAGATGATG+TGG - Chr5:88565252-88565271 None:intergenic 30.0%
GTATTAACGGTTAGTATGTT+AGG + Chr5:88560766-88560785 MsG0580028914.01.T01:intron 30.0%
GTTGAACAAATTACCAAAAG+AGG + Chr5:88569055-88569074 MsG0580028914.01.T01:intron 30.0%
TAAACACTTATGAGACTACT+CGG - Chr5:88559822-88559841 None:intergenic 30.0%
TAATGATCCATTATCTCGAT+CGG + Chr5:88563346-88563365 MsG0580028914.01.T01:CDS 30.0%
TAATTGTCTGCGTAATTAGA+AGG + Chr5:88566919-88566938 MsG0580028914.01.T01:intron 30.0%
TACTAATAAGAGCAATGCTA+AGG - Chr5:88565977-88565996 None:intergenic 30.0%
TAGGGAACAAAGTGAAAATA+AGG + Chr5:88559978-88559997 MsG0580028914.01.T01:intron 30.0%
TAGTATGTTAGGTGTTCAAA+TGG + Chr5:88560777-88560796 MsG0580028914.01.T01:intron 30.0%
TATAAAAATAAAGGAGCTCG+TGG - Chr5:88561253-88561272 None:intergenic 30.0%
TATTACTGGTAAACAGGTAA+TGG - Chr5:88565275-88565294 None:intergenic 30.0%
TCAAGAAGAGCTAATGTATT+AGG - Chr5:88564450-88564469 None:intergenic 30.0%
TCTAATGTGCATAAGTAAGT+TGG - Chr5:88560182-88560201 None:intergenic 30.0%
TCTCAAACCTAAAAAACTTG+TGG + Chr5:88562704-88562723 MsG0580028914.01.T01:intron 30.0%
TGAACAAATTACCAAAAGAG+GGG + Chr5:88569057-88569076 MsG0580028914.01.T01:intron 30.0%
TGAATGAGTCTACAGAAAAA+TGG - Chr5:88560825-88560844 None:intergenic 30.0%
TGATATCTTAACCTTTCTAG+AGG + Chr5:88566705-88566724 MsG0580028914.01.T01:intron 30.0%
TGTAAGAAGTTCAAAAACGA+TGG - Chr5:88563944-88563963 None:intergenic 30.0%
TTAACTTCATCTGTCAACTA+TGG + Chr5:88565148-88565167 MsG0580028914.01.T01:intron 30.0%
TTAATGAATTGATGCTTGTG+AGG + Chr5:88567834-88567853 MsG0580028914.01.T01:CDS 30.0%
TTACATCCCATTGAAATTGT+TGG + Chr5:88564508-88564527 MsG0580028914.01.T01:intron 30.0%
TTAGGATGTACATCTATAGA+AGG - Chr5:88563437-88563456 None:intergenic 30.0%
TTATTAGTAGAGGAATGCTA+GGG + Chr5:88565194-88565213 MsG0580028914.01.T01:intron 30.0%
TTGAATTTGATTGTACGAAG+CGG - Chr5:88561568-88561587 None:intergenic 30.0%
! ACCTTCAAAGATTTGGAATA+GGG + Chr5:88559960-88559979 MsG0580028914.01.T01:intron 30.0%
! ACTTTTACTATTTGGCACAT+TGG + Chr5:88560334-88560353 MsG0580028914.01.T01:intron 30.0%
! AGCCTAAGTGTAGTAATTTT+CGG + Chr5:88566323-88566342 MsG0580028914.01.T01:intron 30.0%
! CACAATTTTCTTGTAATCAG+TGG - Chr5:88562258-88562277 None:intergenic 30.0%
! CCCTAGATAAATTTTCTTGT+TGG - Chr5:88569438-88569457 None:intergenic 30.0%
! GTGAGGTTTGAAATTTGAAA+GGG - Chr5:88566868-88566887 None:intergenic 30.0%
! TCGAAGATTATAGAAGCATA+GGG - Chr5:88563741-88563760 None:intergenic 30.0%
! TCGCTATTACATAGAAGTTT+TGG + Chr5:88562342-88562361 MsG0580028914.01.T01:intron 30.0%
! TGTTTTCACCTTCAAAGATT+TGG + Chr5:88559953-88559972 MsG0580028914.01.T01:intron 30.0%
! TGTTTTTCTGTTAACTCTGT+TGG - Chr5:88559258-88559277 None:intergenic 30.0%
! TTGGTATATGCTTGTTTCTT+GGG + Chr5:88561712-88561731 MsG0580028914.01.T01:intron 30.0%
!! AAAAGCACTAATATTGCTGA+TGG - Chr5:88568207-88568226 None:intergenic 30.0%
!! GAAAAATAGTGGATCATCAT+TGG + Chr5:88561616-88561635 MsG0580028914.01.T01:intron 30.0%
!! GAGAGTTATTGTTGATGATA+AGG - Chr5:88563139-88563158 None:intergenic 30.0%
!! TACAAGTTTGTTTCTACCAT+CGG - Chr5:88560147-88560166 None:intergenic 30.0%
!! TTTATGACGTGAAAGTACTT+AGG - Chr5:88560947-88560966 None:intergenic 30.0%
!!! ACGAGCTCCTTTATTTTTAT+AGG + Chr5:88561252-88561271 MsG0580028914.01.T01:intron 30.0%
!!! ACTAGGAACATTCAGTTTTT+TGG + Chr5:88561779-88561798 MsG0580028914.01.T01:intron 30.0%
!!! AGTTTATTTTAAAGGGAGAG+AGG + Chr5:88569229-88569248 MsG0580028914.01.T01:intron 30.0%
!!! CGAGCTCCTTTATTTTTATA+GGG + Chr5:88561253-88561272 MsG0580028914.01.T01:intron 30.0%
!!! CTCCATGTTTGTTGTTTTTA+AGG - Chr5:88559284-88559303 None:intergenic 30.0%
!!! CTTAACAAACTTTTTTTGGG+TGG + Chr5:88561741-88561760 MsG0580028914.01.T01:intron 30.0%
!!! CTTTCGCTTTTTAACTAACA+TGG + Chr5:88562612-88562631 MsG0580028914.01.T01:intron 30.0%
!!! GATTCTTTTGAAATTCAACG+AGG + Chr5:88568831-88568850 MsG0580028914.01.T01:CDS 30.0%
!!! GTTTATTTTAAAGGGAGAGA+GGG + Chr5:88569230-88569249 MsG0580028914.01.T01:intron 30.0%
!!! GTTTTTTGCAGAAGAGTTTA+CGG + Chr5:88559477-88559496 MsG0580028914.01.T01:intron 30.0%
!!! TGAGCTTTTTCATAATGTGA+TGG - Chr5:88568868-88568887 None:intergenic 30.0%
AAAAAAAATCTTCCATGGGG+TGG - Chr5:88565616-88565635 None:intergenic 35.0%
AAACACTTATGAGACTACTC+GGG - Chr5:88559821-88559840 None:intergenic 35.0%
AAATATGGCAGTTCCATTCA+AGG - Chr5:88564315-88564334 None:intergenic 35.0%
AAATCACCTGATAGTCTGAA+GGG - Chr5:88566164-88566183 None:intergenic 35.0%
AAATGCTAACAAATGCCCTT+AGG - Chr5:88565884-88565903 None:intergenic 35.0%
AACATTACCGATCGAGATAA+TGG - Chr5:88563356-88563375 None:intergenic 35.0%
AATAAATATGCCGAAGAGGA+AGG - Chr5:88564040-88564059 None:intergenic 35.0%
AATGCTAACAAATGCCCTTA+GGG - Chr5:88565883-88565902 None:intergenic 35.0%
AATTGATGCTTGTGAGGTAT+GGG + Chr5:88567840-88567859 MsG0580028914.01.T01:intron 35.0%
ACTTTAGATTAACTAGGGGA+TGG + Chr5:88565532-88565551 MsG0580028914.01.T01:intron 35.0%
AGACTGTTGAGTATGAGTTA+TGG + Chr5:88564128-88564147 MsG0580028914.01.T01:intron 35.0%
AGAGAGAGAGAGAGAATAAA+CGG + Chr5:88562105-88562124 MsG0580028914.01.T01:intron 35.0%
AGCCTGAATATTTGTATCTG+AGG + Chr5:88567244-88567263 MsG0580028914.01.T01:intron 35.0%
AGTGACAGATAAAGATGCTT+TGG - Chr5:88568369-88568388 None:intergenic 35.0%
AGTGGATCAATGGAATGTTA+GGG + Chr5:88562131-88562150 MsG0580028914.01.T01:intron 35.0%
AGTGTGGAAATGCAATACAT+CGG - Chr5:88563808-88563827 None:intergenic 35.0%
AGTTAAACTGCTTCCCTTTA+AGG + Chr5:88566116-88566135 MsG0580028914.01.T01:CDS 35.0%
AGTTTGAAAACGACAAAACC+AGG - Chr5:88562009-88562028 None:intergenic 35.0%
ATCACTCTACTGTAAAACTC+TGG - Chr5:88569663-88569682 None:intergenic 35.0%
ATTAAGCTGTAAGGTAGTTG+AGG - Chr5:88564605-88564624 None:intergenic 35.0%
ATTACAATGACAACGCCAAA+AGG - Chr5:88560658-88560677 None:intergenic 35.0%
ATTCCCTAAAATCACGGAAA+GGG + Chr5:88563699-88563718 MsG0580028914.01.T01:intron 35.0%
ATTCTATAGCAAGGTGAGAT+AGG + Chr5:88560029-88560048 MsG0580028914.01.T01:intron 35.0%
ATTGCAAAGAGAGAAATAGG+TGG + Chr5:88564925-88564944 MsG0580028914.01.T01:intron 35.0%
ATTGGATGAATAGATCAGAG+TGG - Chr5:88566766-88566785 None:intergenic 35.0%
ATTGGATGCCAATGTAAAAC+TGG + Chr5:88561634-88561653 MsG0580028914.01.T01:intron 35.0%
ATTGTGGGGACAAAATCAAA+TGG - Chr5:88565414-88565433 None:intergenic 35.0%
CAAGAAACAAGCATATACCA+AGG - Chr5:88561713-88561732 None:intergenic 35.0%
CAATACATCGGGTTTCTTTA+TGG - Chr5:88563796-88563815 None:intergenic 35.0%
CAATGTTATCAATACAGTCG+AGG - Chr5:88563051-88563070 None:intergenic 35.0%
CACCATAGACTCAAGAAATA+TGG - Chr5:88564330-88564349 None:intergenic 35.0%
CAGATGAAGTAGCTTGAAAA+TGG - Chr5:88568256-88568275 None:intergenic 35.0%
CAGATGAAGTTAATCAGTTC+TGG - Chr5:88565141-88565160 None:intergenic 35.0%
CATAATCTTCTGATAGTCAG+TGG - Chr5:88562401-88562420 None:intergenic 35.0%
CATATTTCTTGAGTCTATGG+TGG + Chr5:88564328-88564347 MsG0580028914.01.T01:intron 35.0%
CATCATATGTTTGTGGTCAT+TGG + Chr5:88561828-88561847 MsG0580028914.01.T01:CDS 35.0%
CATTCACCCAGGAAAAAAAA+TGG - Chr5:88565481-88565500 None:intergenic 35.0%
CCAATTTCAAATCACAGGAT+AGG - Chr5:88563988-88564007 None:intergenic 35.0%
CCATAAAAAACAACTCAAGG+AGG - Chr5:88568413-88568432 None:intergenic 35.0%
CCATCATCTTGGATATCTAA+GGG + Chr5:88561418-88561437 MsG0580028914.01.T01:intron 35.0%
CCTTAGATATCCAAGATGAT+GGG - Chr5:88561420-88561439 None:intergenic 35.0%
CTCATTTACATAAGCTGTTC+AGG - Chr5:88559754-88559773 None:intergenic 35.0%
CTTCTATGCTATTGAGATCA+GGG + Chr5:88561876-88561895 MsG0580028914.01.T01:CDS 35.0%
CTTGTCTCAAAATTGTTGGA+AGG - Chr5:88566828-88566847 None:intergenic 35.0%
GAATTAGTGAGAGTAAAACC+TGG - Chr5:88561931-88561950 None:intergenic 35.0%
GACCTCAGATACAAATATTC+AGG - Chr5:88567249-88567268 None:intergenic 35.0%
GAGTTTGAGAAGAAAGAAAG+TGG - Chr5:88559358-88559377 None:intergenic 35.0%
GATAATTATGTAGTCAGGCT+TGG + Chr5:88561326-88561345 MsG0580028914.01.T01:intron 35.0%
GCAAGCTCCAAATAACATTA+TGG - Chr5:88562308-88562327 None:intergenic 35.0%
GCTACTGCTGATGAATTAAA+TGG + Chr5:88559517-88559536 MsG0580028914.01.T01:five_prime_UTR 35.0%
GGATCTGTTTGTGATAGAAA+TGG - Chr5:88565647-88565666 None:intergenic 35.0%
GGTAGAAACAAACTTGTACA+TGG + Chr5:88560149-88560168 MsG0580028914.01.T01:intron 35.0%
GGTGAGATTTATTGATCCAA+TGG - Chr5:88560083-88560102 None:intergenic 35.0%
GTCCGAAAATTACTACACTT+AGG - Chr5:88566328-88566347 None:intergenic 35.0%
GTGAGTTCATCATATGTTTG+TGG + Chr5:88561821-88561840 MsG0580028914.01.T01:CDS 35.0%
GTTAAACTGCTTCCCTTTAA+GGG + Chr5:88566117-88566136 MsG0580028914.01.T01:CDS 35.0%
TAAATCCGTCAAAACATAGG+AGG - Chr5:88566508-88566527 None:intergenic 35.0%
TAAGAGAGTTCTCTTTGGTT+AGG - Chr5:88563614-88563633 None:intergenic 35.0%
TACGATAAAAGAGTCATACG+AGG - Chr5:88563380-88563399 None:intergenic 35.0%
TATCACAAACAGATCCAAGA+AGG + Chr5:88565651-88565670 MsG0580028914.01.T01:intron 35.0%
TATTCCCTAAAATCACGGAA+AGG + Chr5:88563698-88563717 MsG0580028914.01.T01:intron 35.0%
TATTTGTCTGCTCTATTAGG+TGG + Chr5:88569593-88569612 MsG0580028914.01.T01:intron 35.0%
TCAAGTTTGACAACCATGAA+TGG + Chr5:88564267-88564286 MsG0580028914.01.T01:intron 35.0%
TCATACCTCATTTGATCTAG+TGG - Chr5:88560104-88560123 None:intergenic 35.0%
TCCCTATTCCAAATCTTTGA+AGG - Chr5:88559964-88559983 None:intergenic 35.0%
TGCAATATTTGGACAAGTCA+TGG + Chr5:88566482-88566501 MsG0580028914.01.T01:CDS 35.0%
TGCCATATTTCTTGAGTCTA+TGG + Chr5:88564325-88564344 MsG0580028914.01.T01:intron 35.0%
TGCTAAATCCGTCAAAACAT+AGG - Chr5:88566511-88566530 None:intergenic 35.0%
TGTAGTGTTGCATGTCTAAT+AGG + Chr5:88569755-88569774 MsG0580028914.01.T01:three_prime_UTR 35.0%
TTACAATGACAACGCCAAAA+GGG - Chr5:88560657-88560676 None:intergenic 35.0%
TTGATGAGAAATGCTCCTTA+AGG - Chr5:88562943-88562962 None:intergenic 35.0%
TTGCAGAGAACATGTATTAC+TGG - Chr5:88565289-88565308 None:intergenic 35.0%
TTGGTTAAGAGAGTTCTCTT+TGG - Chr5:88563619-88563638 None:intergenic 35.0%
TTTCAATTTGACATTCACCC+AGG - Chr5:88565492-88565511 None:intergenic 35.0%
TTTGCATCTATTTGACACTC+TGG - Chr5:88562971-88562990 None:intergenic 35.0%
! AAAGGGAAGCAGTTTAACTT+TGG - Chr5:88566115-88566134 None:intergenic 35.0%
! AAATGATAAAGGTTCTGGTC+TGG + Chr5:88564082-88564101 MsG0580028914.01.T01:intron 35.0%
! AACAACGTTAGTGAGCATTT+TGG + Chr5:88562207-88562226 MsG0580028914.01.T01:intron 35.0%
! AAGAAGTGCACAATTGAAAG+AGG + Chr5:88564640-88564659 MsG0580028914.01.T01:intron 35.0%
! AAGGGAAGCAGTTTAACTTT+GGG - Chr5:88566114-88566133 None:intergenic 35.0%
! AATATTGCTGATGGCTTTTG+TGG - Chr5:88568198-88568217 None:intergenic 35.0%
! ACAGATAAAGATGCTTTGGA+AGG - Chr5:88568365-88568384 None:intergenic 35.0%
! ACCAAGAAATAGCCTTACAT+TGG - Chr5:88562179-88562198 None:intergenic 35.0%
! ACCTTTTTAACCTTCCTCTT+CGG + Chr5:88564027-88564046 MsG0580028914.01.T01:intron 35.0%
! AGTGCAAACCAGTTTTACAT+TGG - Chr5:88561645-88561664 None:intergenic 35.0%
! ATCTCACCTTGCTATAGAAT+TGG - Chr5:88560029-88560048 None:intergenic 35.0%
! ATGACTTGTCCAAATATTGC+AGG - Chr5:88566483-88566502 None:intergenic 35.0%
! CACCTTCAAAGATTTGGAAT+AGG + Chr5:88559959-88559978 MsG0580028914.01.T01:intron 35.0%
! CCTATCCTGTGATTTGAAAT+TGG + Chr5:88563985-88564004 MsG0580028914.01.T01:intron 35.0%
! CTCCATGTTAGTTCTTCAAA+AGG - Chr5:88569190-88569209 None:intergenic 35.0%
! CTCGAAGATTATAGAAGCAT+AGG - Chr5:88563742-88563761 None:intergenic 35.0%
! CTTGGTATATGCTTGTTTCT+TGG + Chr5:88561711-88561730 MsG0580028914.01.T01:intron 35.0%
! CTTTATGGATTTTTACTGCC+TGG + Chr5:88561988-88562007 MsG0580028914.01.T01:intron 35.0%
! CTTTGAAGGTGAAAACATCA+AGG - Chr5:88559950-88559969 None:intergenic 35.0%
! GGTGAGGTTTGAAATTTGAA+AGG - Chr5:88566869-88566888 None:intergenic 35.0%
! TATCCCTTTCCGTGATTTTA+GGG - Chr5:88563705-88563724 None:intergenic 35.0%
! TCAGATTGTTCCAGGTTTTA+GGG + Chr5:88566428-88566447 MsG0580028914.01.T01:intron 35.0%
! TGACTTGTCCAAATATTGCA+GGG - Chr5:88566482-88566501 None:intergenic 35.0%
! TTATCCCTTTCCGTGATTTT+AGG - Chr5:88563706-88563725 None:intergenic 35.0%
! TTATGATAACAAAGGCGCAA+TGG - Chr5:88566363-88566382 None:intergenic 35.0%
!! AAGCAAATGTTTGGTTTGGT+TGG + Chr5:88559306-88559325 MsG0580028914.01.T01:five_prime_UTR 35.0%
!! AATTTGGTGTGAACAGTCAA+AGG + Chr5:88569030-88569049 MsG0580028914.01.T01:intron 35.0%
!! ACCAATGTAAGGCTATTTCT+TGG + Chr5:88562175-88562194 MsG0580028914.01.T01:intron 35.0%
!! AGAAGTTTTGGCACTGTAAA+TGG + Chr5:88562354-88562373 MsG0580028914.01.T01:intron 35.0%
!! AGAGTTTGAGACTCTTTTGT+GGG + Chr5:88568537-88568556 MsG0580028914.01.T01:intron 35.0%
!! AGGCTTGTTTGATTGTGTTT+TGG - Chr5:88566308-88566327 None:intergenic 35.0%
!! ATCTATTTATGGTAGTGGAG+TGG - Chr5:88569542-88569561 None:intergenic 35.0%
!! CACTACTTGTATTTGTTGTG+AGG + Chr5:88566987-88567006 MsG0580028914.01.T01:intron 35.0%
!! CATTTTCAAGCTACTTCATC+TGG + Chr5:88568254-88568273 MsG0580028914.01.T01:intron 35.0%
!! CCTTTAAAATAATAGTGGCG+TGG + Chr5:88565905-88565924 MsG0580028914.01.T01:intron 35.0%
!! CTTTTGAAGAACTAACATGG+AGG + Chr5:88569188-88569207 MsG0580028914.01.T01:intron 35.0%
!! GACCTTTTGAAGAACTAACA+TGG + Chr5:88569185-88569204 MsG0580028914.01.T01:intron 35.0%
!! GCATCTTTATCTGTCACTTT+AGG + Chr5:88568371-88568390 MsG0580028914.01.T01:intron 35.0%
!! TAAGGCGTTGATGAAGAATA+TGG - Chr5:88566584-88566603 None:intergenic 35.0%
!! TAGAGTTTGAGACTCTTTTG+TGG + Chr5:88568536-88568555 MsG0580028914.01.T01:intron 35.0%
!! TATCAGCTTTAGGGTATGTT+CGG - Chr5:88560255-88560274 None:intergenic 35.0%
!! TTTTGGTCCATGTTTCTGTA+TGG - Chr5:88567547-88567566 None:intergenic 35.0%
!!! CCACGCCACTATTATTTTAA+AGG - Chr5:88565908-88565927 None:intergenic 35.0%
!!! CCTCCTTGAGTTGTTTTTTA+TGG + Chr5:88568410-88568429 MsG0580028914.01.T01:intron 35.0%
!!! CCTTTGTAGTTGTCGTTTTA+GGG - Chr5:88565048-88565067 None:intergenic 35.0%
!!! CTTTGTAGTTGTCGTTTTAG+GGG - Chr5:88565047-88565066 None:intergenic 35.0%
!!! TATGTTTTGACGGATTTAGC+AGG + Chr5:88566510-88566529 MsG0580028914.01.T01:CDS 35.0%
!!! TCCTTTGTAGTTGTCGTTTT+AGG - Chr5:88565049-88565068 None:intergenic 35.0%
!!! TGACTGACTTTTGAGTTTGA+AGG - Chr5:88559380-88559399 None:intergenic 35.0%
AAAGGAAACGCTAGAGATTG+TGG - Chr5:88565430-88565449 None:intergenic 40.0%
AAGAAATCAGAAGAGCCCTT+AGG + Chr5:88565726-88565745 MsG0580028914.01.T01:intron 40.0%
AAGGAAACGCTAGAGATTGT+GGG - Chr5:88565429-88565448 None:intergenic 40.0%
AATCCTTAACAAGTGCCCTA+AGG - Chr5:88565745-88565764 None:intergenic 40.0%
ACATACAAAGAGACTACCAC+AGG - Chr5:88567575-88567594 None:intergenic 40.0%
ACCTGGAACAATCTGACAAA+AGG - Chr5:88566424-88566443 None:intergenic 40.0%
ACTAAAAAGCAGAGGATGGT+GGG - Chr5:88563894-88563913 None:intergenic 40.0%
ACTTCTAAACTAGTGCCCTA+AGG + Chr5:88565865-88565884 MsG0580028914.01.T01:intron 40.0%
AGAAATCAGAAGAGCCCTTA+GGG + Chr5:88565727-88565746 MsG0580028914.01.T01:intron 40.0%
AGAATAGGCAGTTCCATTCA+TGG - Chr5:88564283-88564302 None:intergenic 40.0%
AGCGAAGCAAATGTTTGGTT+TGG + Chr5:88559302-88559321 MsG0580028914.01.T01:five_prime_UTR 40.0%
AGTGTGACTTATTGATCCGA+TGG + Chr5:88560128-88560147 MsG0580028914.01.T01:intron 40.0%
ATCCTTAACAAGTGCCCTAA+GGG - Chr5:88565744-88565763 None:intergenic 40.0%
ATGCTATTGAGATCAGGGAT+CGG + Chr5:88561881-88561900 MsG0580028914.01.T01:CDS 40.0%
ATGGAAAAGGTTGTGCACAA+CGG + Chr5:88563515-88563534 MsG0580028914.01.T01:intron 40.0%
ATGTCTCCTCATGCTCAATA+AGG - Chr5:88566602-88566621 None:intergenic 40.0%
ATTAGAGTGATACGTCTGCA+TGG + Chr5:88567462-88567481 MsG0580028914.01.T01:intron 40.0%
ATTCAGGCTACTCCTAATCA+TGG - Chr5:88567233-88567252 None:intergenic 40.0%
ATTCCTACTATTTGGGTCCT+AGG + Chr5:88560513-88560532 MsG0580028914.01.T01:intron 40.0%
ATTGATGCTTGTGAGGTATG+GGG + Chr5:88567841-88567860 MsG0580028914.01.T01:intron 40.0%
CAAAAGGGGTAATGTGCAAT+TGG - Chr5:88566784-88566803 None:intergenic 40.0%
CAGACACGAATTAAGCTGTA+AGG - Chr5:88564614-88564633 None:intergenic 40.0%
CATACAAAGAGACTACCACA+GGG - Chr5:88567574-88567593 None:intergenic 40.0%
CATAGGATTTCCAGCTGAAT+TGG - Chr5:88562482-88562501 None:intergenic 40.0%
CCAGACCAATTTCAAATCAC+AGG - Chr5:88563993-88564012 None:intergenic 40.0%
CCCATCATCTTGGATATCTA+AGG + Chr5:88561417-88561436 MsG0580028914.01.T01:intron 40.0%
CCCTAAAACGACAACTACAA+AGG + Chr5:88565045-88565064 MsG0580028914.01.T01:intron 40.0%
CCCTTAGATATCCAAGATGA+TGG - Chr5:88561421-88561440 None:intergenic 40.0%
CTAATCATGGGGAAAAATGG+AGG - Chr5:88567220-88567239 None:intergenic 40.0%
CTCCTAATCATGGGGAAAAA+TGG - Chr5:88567223-88567242 None:intergenic 40.0%
CTTACAGCTTAATTCGTGTC+TGG + Chr5:88564612-88564631 MsG0580028914.01.T01:intron 40.0%
CTTCTAAACTAGTGCCCTAA+GGG + Chr5:88565866-88565885 MsG0580028914.01.T01:intron 40.0%
GAAATCACCTGATAGTCTGA+AGG - Chr5:88566165-88566184 None:intergenic 40.0%
GAAGGAATCGAGAGAAGATA+TGG - Chr5:88563419-88563438 None:intergenic 40.0%
GAAGTGTAGTGAGTAAGTCA+TGG - Chr5:88563659-88563678 None:intergenic 40.0%
GAATTGATGCTTGTGAGGTA+TGG + Chr5:88567839-88567858 MsG0580028914.01.T01:intron 40.0%
GACAACTACAAAGGAACAGA+GGG + Chr5:88565054-88565073 MsG0580028914.01.T01:intron 40.0%
GAGAGAGAGAGAGAATAAAC+GGG + Chr5:88562106-88562125 MsG0580028914.01.T01:intron 40.0%
GAGTGGATCAATGGAATGTT+AGG + Chr5:88562130-88562149 MsG0580028914.01.T01:intron 40.0%
GATTTATACCTGCACATGCA+TGG - Chr5:88566637-88566656 None:intergenic 40.0%
GCTAACACATATGCTAACGT+GGG - Chr5:88568702-88568721 None:intergenic 40.0%
GCTTCTATGCTATTGAGATC+AGG + Chr5:88561875-88561894 MsG0580028914.01.T01:CDS 40.0%
GGAATCAAGAGAACATAGTG+TGG - Chr5:88563824-88563843 None:intergenic 40.0%
GGTTCGCTGCATTATCAATT+CGG - Chr5:88560636-88560655 None:intergenic 40.0%
GTCAATAAACACACTCCCTT+AGG + Chr5:88564788-88564807 MsG0580028914.01.T01:intron 40.0%
GTGTGGAAATGCAATACATC+GGG - Chr5:88563807-88563826 None:intergenic 40.0%
GTTGAAACAAGCTTGTGCAT+GGG - Chr5:88560061-88560080 None:intergenic 40.0%
GTTGGATGAATATTCTCGCA+TGG + Chr5:88564526-88564545 MsG0580028914.01.T01:intron 40.0%
TACTAAAAAGCAGAGGATGG+TGG - Chr5:88563895-88563914 None:intergenic 40.0%
TCAACTGAAGAAGAACTCTC+AGG + Chr5:88563010-88563029 MsG0580028914.01.T01:CDS 40.0%
TCAAGGTTGTAAGCGAGAAT+AGG - Chr5:88564298-88564317 None:intergenic 40.0%
TCATACCTAATTGCCTATGC+AGG + Chr5:88566020-88566039 MsG0580028914.01.T01:intron 40.0%
TCATGGTTGTCAAACTTGAG+AGG - Chr5:88564266-88564285 None:intergenic 40.0%
TCTCACCACTAGATCAAATG+AGG + Chr5:88560096-88560115 MsG0580028914.01.T01:intron 40.0%
TCTGCTATGTTATCTCGACT+TGG + Chr5:88568665-88568684 MsG0580028914.01.T01:intron 40.0%
TCTTACCTGCATAGGCAATT+AGG - Chr5:88566028-88566047 None:intergenic 40.0%
TGAAGGCCAATTCTATAGCA+AGG + Chr5:88560020-88560039 MsG0580028914.01.T01:intron 40.0%
TGAGAGGCTTCTTAAACTTG+TGG - Chr5:88564250-88564269 None:intergenic 40.0%
TGCCATGATCTTTCCTTAGA+CGG - Chr5:88566053-88566072 None:intergenic 40.0%
TGCCTAGAACAGGTATGATA+CGG - Chr5:88566455-88566474 None:intergenic 40.0%
TGGATAATGATAGGACACCT+AGG - Chr5:88563776-88563795 None:intergenic 40.0%
TGTATATGTTGACATCGGTG+TGG - Chr5:88567043-88567062 None:intergenic 40.0%
TGTTGTGAGGATTAAGAAGC+AGG + Chr5:88567000-88567019 MsG0580028914.01.T01:intron 40.0%
TTCAGGCTACTCCTAATCAT+GGG - Chr5:88567232-88567251 None:intergenic 40.0%
TTCCTACTATTTGGGTCCTA+GGG + Chr5:88560514-88560533 MsG0580028914.01.T01:intron 40.0%
TTCTCGCTTACAACCTTGAA+TGG + Chr5:88564299-88564318 MsG0580028914.01.T01:intron 40.0%
TTGAAACAAGCTTGTGCATG+GGG - Chr5:88560060-88560079 None:intergenic 40.0%
TTGTCCAAATATTGCAGGGA+TGG - Chr5:88566478-88566497 None:intergenic 40.0%
TTTGCAACTTTGCCTTGAAG+TGG + Chr5:88564379-88564398 MsG0580028914.01.T01:intron 40.0%
TTTGGCACTGTAAATGGTCA+TGG + Chr5:88562360-88562379 MsG0580028914.01.T01:intron 40.0%
! AAAAAACTGAGTGCATTGGC+TGG + Chr5:88560709-88560728 MsG0580028914.01.T01:intron 40.0%
! AGGAAAGATCATGGCATTGA+TGG + Chr5:88566057-88566076 MsG0580028914.01.T01:CDS 40.0%
! ATGTTTGTGGTCATTGGTCT+TGG + Chr5:88561834-88561853 MsG0580028914.01.T01:CDS 40.0%
! CACAAGCTTGTTTCAACCAT+TGG + Chr5:88560064-88560083 MsG0580028914.01.T01:intron 40.0%
! CCTGTGATTTGAAATTGGTC+TGG + Chr5:88563990-88564009 MsG0580028914.01.T01:intron 40.0%
! GTCAGATTGTTCCAGGTTTT+AGG + Chr5:88566427-88566446 MsG0580028914.01.T01:intron 40.0%
! TAGCTGGAAAGAAGAGTGTA+AGG + Chr5:88561043-88561062 MsG0580028914.01.T01:CDS 40.0%
! TCACAAGAAAACCCCTCTTT+TGG - Chr5:88569071-88569090 None:intergenic 40.0%
! TCCTTTTGTCAGATTGTTCC+AGG + Chr5:88566420-88566439 MsG0580028914.01.T01:intron 40.0%
! TTTTGCAGAAGAGTTTACGG+CGG + Chr5:88559480-88559499 MsG0580028914.01.T01:intron 40.0%
!! AAAGATCATGGCATTGATGG+TGG + Chr5:88566060-88566079 MsG0580028914.01.T01:CDS 40.0%
!! ATGGTAGTGGAGTGGAAAAA+AGG - Chr5:88569534-88569553 None:intergenic 40.0%
!! CAAATGTTTGGTTTGGTTGG+AGG + Chr5:88559309-88559328 MsG0580028914.01.T01:five_prime_UTR 40.0%
!! CTCCATTTTTCCCCATGATT+AGG + Chr5:88567218-88567237 MsG0580028914.01.T01:intron 40.0%
!! GGATTGTTTCTGCTGTAACT+AGG + Chr5:88561762-88561781 MsG0580028914.01.T01:intron 40.0%
!! TCTTCTTGTGGATTTTGACC+AGG + Chr5:88561910-88561929 MsG0580028914.01.T01:CDS 40.0%
!! TGCTTTTTGTCCCATCATCT+TGG + Chr5:88561407-88561426 MsG0580028914.01.T01:intron 40.0%
!! TGGCTTTGAATCACAACAGA+AGG + Chr5:88561799-88561818 MsG0580028914.01.T01:CDS 40.0%
!! TTGTTTCTGAACAGCTGACT+AGG + Chr5:88561096-88561115 MsG0580028914.01.T01:CDS 40.0%
!!! ATTTTGGGTGTCACTTTCCT+TGG + Chr5:88561693-88561712 MsG0580028914.01.T01:intron 40.0%
AAAACTAGCACCGTCTCAAG+AGG - Chr5:88565453-88565472 None:intergenic 45.0%
AAAATCTTCCATGGGGTGGA+TGG - Chr5:88565612-88565631 None:intergenic 45.0%
AAACATATCCATCCACCCCA+TGG + Chr5:88565601-88565620 MsG0580028914.01.T01:intron 45.0%
AACCTCACCAAAACCATCAC+AGG + Chr5:88566880-88566899 MsG0580028914.01.T01:intron 45.0%
AAGAACCCTTTCCATGGAGA+GGG + Chr5:88565702-88565721 MsG0580028914.01.T01:intron 45.0%
AAGCTGAAGAACCCTTTCCA+TGG + Chr5:88565696-88565715 MsG0580028914.01.T01:intron 45.0%
AATTGCCACCTAGCTAGAAG+TGG - Chr5:88565115-88565134 None:intergenic 45.0%
ACAATATTACACCCACCCCT+AGG - Chr5:88560533-88560552 None:intergenic 45.0%
AGAGAGAATAAACGGGTGAG+TGG + Chr5:88562113-88562132 MsG0580028914.01.T01:intron 45.0%
AGGAAACGCTAGAGATTGTG+GGG - Chr5:88565428-88565447 None:intergenic 45.0%
ATACAGTCGAGGACAAAGTC+AGG - Chr5:88563040-88563059 None:intergenic 45.0%
ATGATACGGACCCTAAAACC+TGG - Chr5:88566441-88566460 None:intergenic 45.0%
CACCGTCTAAGGAAAGATCA+TGG + Chr5:88566048-88566067 MsG0580028914.01.T01:CDS 45.0%
CATGGAGCGAAGCAAATGTT+TGG + Chr5:88559297-88559316 MsG0580028914.01.T01:five_prime_UTR 45.0%
CGACAACTACAAAGGAACAG+AGG + Chr5:88565053-88565072 MsG0580028914.01.T01:intron 45.0%
CGACAGACCATACAGAAACA+TGG + Chr5:88567537-88567556 MsG0580028914.01.T01:intron 45.0%
CGCTAACACATATGCTAACG+TGG - Chr5:88568703-88568722 None:intergenic 45.0%
CGTTTCCTTTCCTCTTGAGA+CGG + Chr5:88565440-88565459 MsG0580028914.01.T01:intron 45.0%
CTAAAAAGCAGAGGATGGTG+GGG - Chr5:88563893-88563912 None:intergenic 45.0%
CTCAAAAGCTCAGTGCCTTA+AGG + Chr5:88562925-88562944 MsG0580028914.01.T01:CDS 45.0%
CTGATTTCTTTCCCTCTCCA+TGG - Chr5:88565716-88565735 None:intergenic 45.0%
GAGCATGAGGAGACATTGTA+CGG + Chr5:88566606-88566625 MsG0580028914.01.T01:CDS 45.0%
GATCGGAAAGCTTCTTCTTG+TGG + Chr5:88561898-88561917 MsG0580028914.01.T01:CDS 45.0%
GCCGAAGAGGAAGGTTAAAA+AGG - Chr5:88564031-88564050 None:intergenic 45.0%
GCTAGAAGTGGACACACAAA+TGG - Chr5:88565103-88565122 None:intergenic 45.0%
GGAAAACCCTTCAGACTATC+AGG + Chr5:88566155-88566174 MsG0580028914.01.T01:CDS 45.0%
GGTTGAAACAAGCTTGTGCA+TGG - Chr5:88560062-88560081 None:intergenic 45.0%
GTAGAGTGAATCCTAGGGAT+GGG + Chr5:88560551-88560570 MsG0580028914.01.T01:intron 45.0%
GTATGCAAGAAGCCACTTCA+AGG - Chr5:88564394-88564413 None:intergenic 45.0%
GTCCGTATCATACCTGTTCT+AGG + Chr5:88566450-88566469 MsG0580028914.01.T01:CDS 45.0%
GTCGAATTTGTGTCTCCTAC+AGG + Chr5:88561003-88561022 MsG0580028914.01.T01:intron 45.0%
GTTGACAGATGCACTATAGC+TGG + Chr5:88561027-88561046 MsG0580028914.01.T01:exon 45.0%
TAAACGGGTGAGTGGATCAA+TGG + Chr5:88562121-88562140 MsG0580028914.01.T01:intron 45.0%
TACAGTCGAGGACAAAGTCA+GGG - Chr5:88563039-88563058 None:intergenic 45.0%
TCAGCAATGCGTATTCTCGT+TGG - Chr5:88563311-88563330 None:intergenic 45.0%
TCAGGCTACTCCTAATCATG+GGG - Chr5:88567231-88567250 None:intergenic 45.0%
TCCTACTATTTGGGTCCTAG+GGG + Chr5:88560515-88560534 MsG0580028914.01.T01:intron 45.0%
TCTCCACTTGGACCCTTAAA+GGG - Chr5:88566132-88566151 None:intergenic 45.0%
TCTTGCTGCATGTGTACGTA+GGG + Chr5:88563241-88563260 MsG0580028914.01.T01:CDS 45.0%
TCTTTCCCTCTCCATGGAAA+GGG - Chr5:88565710-88565729 None:intergenic 45.0%
TGAAGGTTCTATCTGCCACT+GGG + Chr5:88563267-88563286 MsG0580028914.01.T01:CDS 45.0%
TGTAGAGTGAATCCTAGGGA+TGG + Chr5:88560550-88560569 MsG0580028914.01.T01:intron 45.0%
TTACCTTTCGCCAATTCAGC+TGG + Chr5:88562469-88562488 MsG0580028914.01.T01:intron 45.0%
TTCTCCACTTGGACCCTTAA+AGG - Chr5:88566133-88566152 None:intergenic 45.0%
TTCTTGCTGCATGTGTACGT+AGG + Chr5:88563240-88563259 MsG0580028914.01.T01:CDS 45.0%
TTCTTTCCCTCTCCATGGAA+AGG - Chr5:88565711-88565730 None:intergenic 45.0%
TTGAAGGTTCTATCTGCCAC+TGG + Chr5:88563266-88563285 MsG0580028914.01.T01:CDS 45.0%
TTTCCAGCTGAATTGGCGAA+AGG - Chr5:88562475-88562494 None:intergenic 45.0%
! AGTCAGGCTTGGCATGTTTT+AGG + Chr5:88561337-88561356 MsG0580028914.01.T01:intron 45.0%
! CTGGAAAGAAGAGTGTAAGG+TGG + Chr5:88561046-88561065 MsG0580028914.01.T01:CDS 45.0%
! GATAATGCAGCGAACCCTTT+TGG + Chr5:88560640-88560659 MsG0580028914.01.T01:intron 45.0%
! TAACTCTGTTGGCCTGACAT+CGG - Chr5:88559247-88559266 None:intergenic 45.0%
! TCAACGCCTTATTGAGCATG+AGG + Chr5:88566593-88566612 MsG0580028914.01.T01:CDS 45.0%
! TTGTGTGTCCACTTCTAGCT+AGG + Chr5:88565104-88565123 MsG0580028914.01.T01:intron 45.0%
!! ATGTTTGGTTTGGTTGGAGG+TGG + Chr5:88559312-88559331 MsG0580028914.01.T01:five_prime_UTR 45.0%
!! CATGGCCTCCTATGTTTTGA+CGG + Chr5:88566500-88566519 MsG0580028914.01.T01:CDS 45.0%
!! GGCATGTTTTAGGCTGAACA+TGG + Chr5:88561347-88561366 MsG0580028914.01.T01:intron 45.0%
!! TTTGTGGTCATTGGTCTTGG+AGG + Chr5:88561837-88561856 MsG0580028914.01.T01:CDS 45.0%
!!! ATTTATTTATTTTTACATAT+AGG + Chr5:88565319-88565338 MsG0580028914.01.T01:intron 5.0%
!!! TTTTTTATATAATTTTTTGT+TGG + Chr5:88567611-88567630 MsG0580028914.01.T01:intron 5.0%
ACCCCTAGGACCCAAATAGT+AGG - Chr5:88560519-88560538 None:intergenic 50.0%
ACTAAAGCTCCCACATACGC+AGG - Chr5:88560591-88560610 None:intergenic 50.0%
ACTATTTGGGTCCTAGGGGT+GGG + Chr5:88560519-88560538 MsG0580028914.01.T01:intron 50.0%
AGACGGTGTCTTACCTGCAT+AGG - Chr5:88566036-88566055 None:intergenic 50.0%
AGGTGGATGAGCATGAGTCA+CGG + Chr5:88569610-88569629 MsG0580028914.01.T01:intron 50.0%
AGGTTGCGAAAGACGTTGGA+CGG + Chr5:88567795-88567814 MsG0580028914.01.T01:CDS 50.0%
AGTGATACGTCTGCATGGCA+TGG + Chr5:88567467-88567486 MsG0580028914.01.T01:intron 50.0%
ATGGACCAAAACAAGCCCTG+TGG + Chr5:88567556-88567575 MsG0580028914.01.T01:intron 50.0%
ATGTGTACGTAGGGGCTTGA+AGG + Chr5:88563250-88563269 MsG0580028914.01.T01:CDS 50.0%
CTAAAGCTCCCACATACGCA+GGG - Chr5:88560590-88560609 None:intergenic 50.0%
CTTGCTGCATGTGTACGTAG+GGG + Chr5:88563242-88563261 MsG0580028914.01.T01:CDS 50.0%
GAAGAACCCTTTCCATGGAG+AGG + Chr5:88565701-88565720 MsG0580028914.01.T01:intron 50.0%
GAAGGTTCTATCTGCCACTG+GGG + Chr5:88563268-88563287 MsG0580028914.01.T01:CDS 50.0%
GGCACCATCCCTGCAATATT+TGG + Chr5:88566471-88566490 MsG0580028914.01.T01:CDS 50.0%
GGCTTCTTGCATACATGCTC+TGG + Chr5:88564400-88564419 MsG0580028914.01.T01:intron 50.0%
GTGCATCTGTCAACACCTGT+AGG - Chr5:88561021-88561040 None:intergenic 50.0%
GTTGCGACAAGAGCAGATGT+TGG + Chr5:88562899-88562918 MsG0580028914.01.T01:CDS 50.0%
TAAGGGTCCAAGTGGAGAAG+AGG + Chr5:88566134-88566153 MsG0580028914.01.T01:CDS 50.0%
TACTATTTGGGTCCTAGGGG+TGG + Chr5:88560518-88560537 MsG0580028914.01.T01:intron 50.0%
TAGCACCGTCTCAAGAGGAA+AGG - Chr5:88565448-88565467 None:intergenic 50.0%
TAGGTGGGACAGTACGAAAC+CGG + Chr5:88568792-88568811 MsG0580028914.01.T01:intron 50.0%
TCGGATTAAAAAGGGCAGCC+CGG - Chr5:88560617-88560636 None:intergenic 50.0%
TGAGCATGAGTCACGGACAT+TGG + Chr5:88569617-88569636 MsG0580028914.01.T01:CDS 50.0%
TGCAACACTACACCACCAAG+TGG - Chr5:88569747-88569766 None:intergenic 50.0%
TGCAGGTAAGACACCGTCTA+AGG + Chr5:88566037-88566056 MsG0580028914.01.T01:intron 50.0%
TGTGCACAACGGCTCTACAA+TGG + Chr5:88563526-88563545 MsG0580028914.01.T01:intron 50.0%
TTCGAGATTGTGCGTTGCCT+AGG + Chr5:88563756-88563775 MsG0580028914.01.T01:intron 50.0%
! AGCCCTTAGGGCACTTGTTA+AGG + Chr5:88565739-88565758 MsG0580028914.01.T01:intron 50.0%
! ATGTGGGAGCTTTAGTCCTC+CGG + Chr5:88560595-88560614 MsG0580028914.01.T01:intron 50.0%
! CTGTGAGCCTGTGATGGTTT+TGG - Chr5:88566890-88566909 None:intergenic 50.0%
! CTTCCCTTTAAGGGTCCAAG+TGG + Chr5:88566126-88566145 MsG0580028914.01.T01:CDS 50.0%
! GGGTTTTCCTCTTCTCCACT+TGG - Chr5:88566144-88566163 None:intergenic 50.0%
! GTTGGAGGTGGTGCTCTTTT+AGG + Chr5:88559324-88559343 MsG0580028914.01.T01:five_prime_UTR 50.0%
! TGTGTCCACTTCTAGCTAGG+TGG + Chr5:88565107-88565126 MsG0580028914.01.T01:intron 50.0%
!! GACTACCACAGGGCTTGTTT+TGG - Chr5:88567564-88567583 None:intergenic 50.0%
!! GTCATTGGTCTTGGAGGTGT+TGG + Chr5:88561843-88561862 MsG0580028914.01.T01:CDS 50.0%
!! TGGAAGAAGTGCTAGAGAGC+AGG + Chr5:88567775-88567794 MsG0580028914.01.T01:CDS 50.0%
!!! AGCCTGTGATGGTTTTGGTG+AGG - Chr5:88566885-88566904 None:intergenic 50.0%
AAGACGTTGGACGGGCAATG+TGG + Chr5:88567804-88567823 MsG0580028914.01.T01:CDS 55.0%
AGTCGAGGACAAAGTCAGGG+TGG - Chr5:88563036-88563055 None:intergenic 55.0%
CGGAACTTCCATGCATGTGC+AGG + Chr5:88566626-88566645 MsG0580028914.01.T01:CDS 55.0%
GAGCAGGTTGCGAAAGACGT+TGG + Chr5:88567791-88567810 MsG0580028914.01.T01:CDS 55.0%
GATTAAAAAGGGCAGCCCGG+AGG - Chr5:88560614-88560633 None:intergenic 55.0%
GCACAACGGCTCTACAATGG+TGG + Chr5:88563529-88563548 MsG0580028914.01.T01:intron 55.0%
GGTTGCGAAAGACGTTGGAC+GGG + Chr5:88567796-88567815 MsG0580028914.01.T01:CDS 55.0%
TGTCAGCTGTGAGCCTGTGA+TGG - Chr5:88566896-88566915 None:intergenic 55.0%
! TGTGGGAGCTTTAGTCCTCC+GGG + Chr5:88560596-88560615 MsG0580028914.01.T01:intron 55.0%
!! TAGGAGCGTTGTGCTCTGGT+AGG - Chr5:88563595-88563614 None:intergenic 55.0%
!! TGGTTAGGAGCGTTGTGCTC+TGG - Chr5:88563599-88563618 None:intergenic 55.0%
ACATACGCAGGGTCCGGGAA+GGG - Chr5:88560579-88560598 None:intergenic 60.0%
GCAGGGATGGTGCCTAGAAC+AGG - Chr5:88566465-88566484 None:intergenic 60.0%
GTTCTATCTGCCACTGGGGC+TGG + Chr5:88563272-88563291 MsG0580028914.01.T01:CDS 60.0%
TTCCCGGACCCTGCGTATGT+GGG + Chr5:88560579-88560598 MsG0580028914.01.T01:intron 60.0%
! CTCTGTTGGCCTGACATCGG+AGG - Chr5:88559244-88559263 None:intergenic 60.0%
!! AAGCAGAGGATGGTGGGGAC+TGG - Chr5:88563888-88563907 None:intergenic 60.0%
!! AGCAGAGGATGGTGGGGACT+GGG - Chr5:88563887-88563906 None:intergenic 60.0%
CACATACGCAGGGTCCGGGA+AGG - Chr5:88560580-88560599 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - Chr5:88560578-88560597 None:intergenic 65.0%
CTAGGGATGGGACCCCTTCC+CGG + Chr5:88560563-88560582 MsG0580028914.01.T01:intron 65.0%
CTCCCACATACGCAGGGTCC+GGG - Chr5:88560584-88560603 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+TGG + Chr5:88560578-88560597 MsG0580028914.01.T01:intron 65.0%
GCTCCCACATACGCAGGGTC+CGG - Chr5:88560585-88560604 None:intergenic 65.0%
! AGCTCTAGCACCAGCCCCAG+TGG - Chr5:88563285-88563304 None:intergenic 65.0%
CGGGAAGGGGTCCCATCCCT+AGG - Chr5:88560565-88560584 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 88559239 88569873 88559239 ID=MsG0580028914.01;Name=MsG0580028914.01
Chr5 mRNA 88559239 88569873 88559239 ID=MsG0580028914.01.T01;Parent=MsG0580028914.01;Name=MsG0580028914.01.T01;_AED=0.46;_eAED=0.46;_QI=214|1|1|1|0.6|0.54|11|151|406
Chr5 exon 88559239 88559391 88559239 ID=MsG0580028914.01.T01:exon:48731;Parent=MsG0580028914.01.T01
Chr5 exon 88559488 88559538 88559488 ID=MsG0580028914.01.T01:exon:48732;Parent=MsG0580028914.01.T01
Chr5 exon 88561025 88561117 88561025 ID=MsG0580028914.01.T01:exon:48733;Parent=MsG0580028914.01.T01
Chr5 exon 88561784 88561931 88561784 ID=MsG0580028914.01.T01:exon:48734;Parent=MsG0580028914.01.T01
Chr5 exon 88562869 88563078 88562869 ID=MsG0580028914.01.T01:exon:48735;Parent=MsG0580028914.01.T01
Chr5 exon 88563233 88563367 88563233 ID=MsG0580028914.01.T01:exon:48736;Parent=MsG0580028914.01.T01
Chr5 exon 88566042 88566176 88566042 ID=MsG0580028914.01.T01:exon:48737;Parent=MsG0580028914.01.T01
Chr5 exon 88566432 88566647 88566432 ID=MsG0580028914.01.T01:exon:48738;Parent=MsG0580028914.01.T01
Chr5 exon 88567731 88567855 88567731 ID=MsG0580028914.01.T01:exon:48739;Parent=MsG0580028914.01.T01
Chr5 exon 88568795 88568852 88568795 ID=MsG0580028914.01.T01:exon:48740;Parent=MsG0580028914.01.T01
Chr5 exon 88569612 88569873 88569612 ID=MsG0580028914.01.T01:exon:48741;Parent=MsG0580028914.01.T01
Chr5 five_prime_UTR 88559239 88559391 88559239 ID=MsG0580028914.01.T01:five_prime_utr;Parent=MsG0580028914.01.T01
Chr5 five_prime_UTR 88559488 88559538 88559488 ID=MsG0580028914.01.T01:five_prime_utr;Parent=MsG0580028914.01.T01
Chr5 five_prime_UTR 88561025 88561034 88561025 ID=MsG0580028914.01.T01:five_prime_utr;Parent=MsG0580028914.01.T01
Chr5 CDS 88561035 88561117 88561035 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88561784 88561931 88561784 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88562869 88563078 88562869 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88563233 88563367 88563233 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88566042 88566176 88566042 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88566432 88566647 88566432 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88567731 88567855 88567731 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88568795 88568852 88568795 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 CDS 88569612 88569722 88569612 ID=MsG0580028914.01.T01:cds;Parent=MsG0580028914.01.T01
Chr5 three_prime_UTR 88569723 88569873 88569723 ID=MsG0580028914.01.T01:three_prime_utr;Parent=MsG0580028914.01.T01
Gene Sequence

>MsG0580028914.01.T01

ATGCACTATAGCTGGAAAGAAGAGTGTAAGGTGGTTAGTGACGATCTTCTGAAAGACGAGATTGTTTCTGAACAGCTGACTAGGAACATTCAGTTTTTTGGCTTTGAATCACAACAGAAGGTGAGTTCATCATATGTTTGTGGTCATTGGTCTTGGAGGTGTTGGAGTCATGCTGCTTCTATGCTATTGAGATCAGGGATCGGAAAGCTTCTTCTTGTGGATTTTGACCAGGTTTCTCTTTCATCACTAAATCGACACGCTGTTGCGACAAGAGCAGATGTTGGCATCTCAAAAGCTCAGTGCCTTAAGGAGCATTTCTCATCAATATTTCCAGAGTGTCAAATAGATGCAAAAGTGATGTTATATGATTCATCAACTGAAGAAGAACTCTCAGGCCACCCTGACTTTGTCCTCGACTGTATTGATAACATTGATACAAAGGTGGCACTTCTTGCTGCATGTGTACGTAGGGGCTTGAAGGTTCTATCTGCCACTGGGGCTGGTGCTAGAGCTGATCCAACGAGAATACGCATTGCTGATCTAAGAGAGTCTACTAATGATCCATTATCTCGATCGGTAAGACACCGTCTAAGGAAAGATCATGGCATTGATGGTGGTATCCCTGTTGTGTTTTCTTTAGAAAAACCCAAAGTTAAACTGCTTCCCTTTAAGGGTCCAAGTGGAGAAGAGGAAAACCCTTCAGACTATCAGATTGTTCCAGGTTTTAGGGTCCGTATCATACCTGTTCTAGGCACCATCCCTGCAATATTTGGACAAGTCATGGCCTCCTATGTTTTGACGGATTTAGCAGGATTGCATGTTCAAACAGAACCTGTAGTAAATTTTGATATGGATCATTACCATATTCTTCATCAACGCCTTATTGAGCATGAGGAGACATTGTACGGAACTTCCATGCATGTGCAGGTAGACGCTGAAGAAGTGAAGTATATTGCTAAAGAATTATGGCATGGAAGAAGTGCTAGAGAGCAGGTTGCGAAAGACGTTGGACGGGCAATGTGGCGATCAGTTAATGAATTGATGCTTGTGAGGTGGGACAGTACGAAACCGGCATCCATTTCTAATTTGATTCTTTTGAAATTCAACGAGGTGGATGAGCATGAGTCACGGACATTGGATGATGTAAAAGAAAAGGAACCAGAGTTTTACAGTAGAGTGATTGCTGTGTTAAAACAAGCTGAAAATGACTTTGGATTATGA
Protein sequence

>MsG0580028914.01.T01

MHYSWKEECKVVSDDLLKDEIVSEQLTRNIQFFGFESQQKVSSSYVCGHWSWRCWSHAASMLLRSGIGKLLLVDFDQVSLSSLNRHAVATRADVGISKAQCLKEHFSSIFPECQIDAKVMLYDSSTEEELSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRSVRHRLRKDHGIDGGIPVVFSLEKPKVKLLPFKGPSGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVLTDLAGLHVQTEPVVNFDMDHYHILHQRLIEHEETLYGTSMHVQVDAEEVKYIAKELWHGRSAREQVAKDVGRAMWRSVNELMLVRWDSTKPASISNLILLKFNEVDEHESRTLDDVKEKEPEFYSRVIAVLKQAENDFGL*