AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011339.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011339.01.T01 MTR_2g102430 90.710 366 29 1 1 366 1 361 0.0 681
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011339.01.T01 AT1G80420 51.872 374 145 10 1 364 1 349 9.09e-117 343
MsG0280011339.01.T01 AT1G80420 51.872 374 145 10 1 364 1 349 9.09e-117 343
MsG0280011339.01.T01 AT1G80420 51.872 374 145 10 1 364 1 349 9.09e-117 343
MsG0280011339.01.T01 AT1G80420 51.872 374 145 10 1 364 1 349 9.09e-117 343
MsG0280011339.01.T01 AT1G80420 50.949 369 144 9 1 364 1 337 1.95e-110 327

Find 90 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATGGTCACGGAAATTT+TGG 0.168059 2:+82631089 MsG0280011339.01.T01:CDS
TGTCGAAACTTGGGAGTATT+TGG 0.171012 2:-82631802 None:intergenic
TGTTGAGGAGCTTGCAAAAT+TGG 0.254184 2:+82634953 MsG0280011339.01.T01:CDS
CTTCTTCTTGTTCTTTGTTT+CGG 0.263701 2:-82630754 None:intergenic
GGTGAGAAATCCAGTGAAAT+TGG 0.267428 2:+82631137 MsG0280011339.01.T01:CDS
TAGTTTGGTTTGCACAATTT+TGG 0.268602 2:+82635293 MsG0280011339.01.T01:three_prime_UTR
TTCGGCGCTGTGTTTGATTT+TGG 0.271414 2:-82630736 None:intergenic
CTGATTGAACTGGTTTGTTT+AGG 0.274195 2:+82635257 MsG0280011339.01.T01:three_prime_UTR
TTTACGAGGAAGAACTAAAT+AGG 0.286647 2:+82635048 MsG0280011339.01.T01:CDS
GAACTCTAATTGCACTCTTT+TGG 0.288941 2:+82631768 MsG0280011339.01.T01:CDS
TTCTGACTTCAACAAGCTTA+TGG 0.294131 2:+82631208 MsG0280011339.01.T01:CDS
TGTATGCAGTGTATTGTCTT+AGG 0.324617 2:-82635325 None:intergenic
AGCTTCAACTTGTCGAAACT+TGG 0.336320 2:-82631812 None:intergenic
TTGAACTTTGGTCTTCTTGT+TGG 0.338177 2:-82631165 None:intergenic
GGGATGAAAAGTAGTTAGTT+TGG 0.339333 2:+82635278 MsG0280011339.01.T01:three_prime_UTR
ACAAATGCTGCATCTTCTTC+TGG 0.343819 2:+82635134 MsG0280011339.01.T01:CDS
TGATTGAACTGGTTTGTTTA+GGG 0.350215 2:+82635258 MsG0280011339.01.T01:three_prime_UTR
TTTGTTATCTCACTTGGATC+TGG 0.354921 2:-82634003 None:intergenic
GTGCACAAGTCCGAAAATTC+AGG 0.376157 2:-82635489 None:intergenic
ATATCTTCCTTTGACATTGA+AGG 0.399325 2:-82634996 None:intergenic
TGCAGTCCAGTGCTAGTTTG+TGG 0.400514 2:-82635019 None:intergenic
ATGGAAGTAGTCTCCTTTGA+AGG 0.419702 2:-82633478 None:intergenic
GAGGTCGCGTGCTATGGAAA+TGG 0.420876 2:+82631723 MsG0280011339.01.T01:CDS
GTTGGAAAGTCAAGAAGAAA+AGG 0.430535 2:+82633699 MsG0280011339.01.T01:CDS
TTAAATTTAACCAGGACATT+GGG 0.434931 2:+82634895 MsG0280011339.01.T01:intron
CCATGATGGAAGGTTTCTCT+TGG 0.438435 2:-82631051 None:intergenic
CAATTTCAACGAGTTTCCTC+TGG 0.440206 2:-82632786 None:intergenic
GAATAAAACAATTCAGTGGT+TGG 0.443870 2:+82633681 MsG0280011339.01.T01:CDS
CATCTTGAGGTCGCGTGCTA+TGG 0.453790 2:+82631717 MsG0280011339.01.T01:CDS
GTTAAATTTAACCAGGACAT+TGG 0.458466 2:+82634894 MsG0280011339.01.T01:intron
CGACAAGTTGAAGCTGATTG+TGG 0.469462 2:+82631820 MsG0280011339.01.T01:CDS
TCACAGGTGACACATCTTAG+AGG 0.470456 2:-82635231 None:intergenic
TCACCACCTTCATCCAAAGT+TGG 0.472003 2:-82631119 None:intergenic
GATAGTTACCTTATGCATGC+TGG 0.472246 2:+82632808 MsG0280011339.01.T01:CDS
GAAGGCTCAAAGCATTTCCT+AGG 0.473486 2:-82633628 None:intergenic
AAAGTTCAAAATGAAAATGC+TGG 0.480138 2:+82631179 MsG0280011339.01.T01:CDS
AGGTCGCGTGCTATGGAAAT+GGG 0.481408 2:+82631724 MsG0280011339.01.T01:CDS
GTGAGAAATCCAGTGAAATT+GGG 0.485864 2:+82631138 MsG0280011339.01.T01:CDS
AACAGACTAATCAACCAAAC+AGG 0.486202 2:+82630777 MsG0280011339.01.T01:five_prime_UTR
GTTGGAAGACCCAATTTCAC+TGG 0.493771 2:-82631147 None:intergenic
ATGGTTTCCCAGCATGCATA+AGG 0.493889 2:-82632816 None:intergenic
CCTGTGAATGCTGATTGAAC+TGG 0.494727 2:+82635247 MsG0280011339.01.T01:exon
TTGTGGAACCATTGTATCAA+AGG 0.498296 2:+82631837 MsG0280011339.01.T01:CDS
TGTGGTTTGTGGGGTACAGA+TGG 0.499919 2:-82633436 None:intergenic
GAAAAGACATTGACGATCCT+AGG 0.500018 2:+82633611 MsG0280011339.01.T01:CDS
AAACCACAAAAGCATGTTGA+AGG 0.502946 2:+82633451 MsG0280011339.01.T01:CDS
GCCCACTTCTTCACTTCAGA+AGG 0.503953 2:-82633646 None:intergenic
ATAGTTACCTTATGCATGCT+GGG 0.506945 2:+82632809 MsG0280011339.01.T01:CDS
GACCTCAAGATGCCACGCTC+CGG 0.520624 2:-82631706 None:intergenic
AAGACAATACACTGCATACA+AGG 0.522180 2:+82635328 MsG0280011339.01.T01:three_prime_UTR
AGATATCCACAAACTAGCAC+TGG 0.527248 2:+82635013 MsG0280011339.01.T01:CDS
ATTCTTACCTCGAGTTGTTG+AGG 0.540660 2:+82634938 MsG0280011339.01.T01:CDS
ATCCGGAGCGTGGCATCTTG+AGG 0.545472 2:+82631704 MsG0280011339.01.T01:CDS
CAAAGATAAATGAAGAACAT+AGG 0.545893 2:+82635096 MsG0280011339.01.T01:CDS
GAGCAGAGTATAAGCAGGAC+TGG 0.547595 2:+82631746 MsG0280011339.01.T01:CDS
GCTGGGAAACCATGGCGTAA+AGG 0.547805 2:+82632826 MsG0280011339.01.T01:CDS
TTGAAGTCATCCATGATGGA+AGG 0.549060 2:-82631061 None:intergenic
GCTTCAACTTGTCGAAACTT+GGG 0.550803 2:-82631811 None:intergenic
CCAAGAGAAACCTTCCATCA+TGG 0.554767 2:+82631051 MsG0280011339.01.T01:CDS
AAGAGACCAACTTTGGATGA+AGG 0.555473 2:+82631113 MsG0280011339.01.T01:CDS
AGCCTTCTGAAGTGAAGAAG+TGG 0.556085 2:+82633644 MsG0280011339.01.T01:CDS
GATCTACCTCCTTTACGCCA+TGG 0.556671 2:-82632835 None:intergenic
CAATAAACCTTCAATGTCAA+AGG 0.558692 2:+82634989 MsG0280011339.01.T01:CDS
CTTGCAAAATTGGATGTTGT+GGG 0.560366 2:+82634963 MsG0280011339.01.T01:CDS
CAAAGCAGACGTGAGCTGCA+AGG 0.568223 2:-82635410 None:intergenic
GCTTGCAAAATTGGATGTTG+TGG 0.569859 2:+82634962 MsG0280011339.01.T01:CDS
AGAGGCAAGTCTCATAGACC+TGG 0.570930 2:-82635352 None:intergenic
TTGGGAGAGTAACTGAGGAC+TGG 0.572129 2:+82634913 MsG0280011339.01.T01:CDS
AGGATAAAGTCTTATATGCA+AGG 0.572773 2:-82635211 None:intergenic
TGTTGAAGGAGAGCCTTCAA+AGG 0.574537 2:+82633465 MsG0280011339.01.T01:CDS
GACTACTTCCATAAAATCAA+AGG 0.576252 2:+82633489 MsG0280011339.01.T01:CDS
ATGACTTCAAAAGAAGATGA+TGG 0.581741 2:+82631074 MsG0280011339.01.T01:CDS
CCAGTTCAATCAGCATTCAC+AGG 0.584788 2:-82635247 None:intergenic
TGATGATACAATCGAGATGA+CGG 0.585128 2:+82635175 MsG0280011339.01.T01:CDS
ATTTGAATAAAACAATTCAG+TGG 0.592039 2:+82633677 MsG0280011339.01.T01:CDS
GCCTTCTGAAGTGAAGAAGT+GGG 0.595508 2:+82633645 MsG0280011339.01.T01:CDS
TGCAAGAGTGTTACAGCCAG+AGG 0.601480 2:+82632770 MsG0280011339.01.T01:CDS
ATACACTGCATACAAGGCCC+AGG 0.601757 2:+82635334 MsG0280011339.01.T01:three_prime_UTR
AGATCACATGAAGTCAATGA+AGG 0.603097 2:+82632853 MsG0280011339.01.T01:CDS
AATGGGAGCAGAGTATAAGC+AGG 0.603134 2:+82631741 MsG0280011339.01.T01:CDS
GCAAGCTCCTCAACAACTCG+AGG 0.615189 2:-82634945 None:intergenic
TTATGCATGCTGGGAAACCA+TGG 0.623179 2:+82632818 MsG0280011339.01.T01:CDS
TCAAAAGAAGATGATGGTCA+CGG 0.624811 2:+82631080 MsG0280011339.01.T01:CDS
GGGAAACCATGGCGTAAAGG+AGG 0.628797 2:+82632829 MsG0280011339.01.T01:CDS
AGATGCCATATGTTCTCTCG+AGG 0.652619 2:+82634059 MsG0280011339.01.T01:CDS
AGACCAACTTTGGATGAAGG+TGG 0.656003 2:+82631116 MsG0280011339.01.T01:CDS
GAGGCAAGTCTCATAGACCT+GGG 0.665165 2:-82635351 None:intergenic
GTGAGCTGCAAGGCTAACAA+AGG 0.669542 2:-82635400 None:intergenic
GGACATTGGGAGAGTAACTG+AGG 0.703411 2:+82634908 MsG0280011339.01.T01:intron
GGACTGCAAATGTATTTACG+AGG 0.711362 2:+82635034 MsG0280011339.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATATAATTTGAGAAAAA+TGG + Chr2:82633538-82633557 MsG0280011339.01.T01:intron 10.0%
!!! ATTTTTTTAACAAATGAATT+TGG - Chr2:82633848-82633867 None:intergenic 10.0%
!! ATAAAAAAAAAAAACCTGTT+TGG - Chr2:82630794-82630813 None:intergenic 15.0%
!! CACTTATTTATATATATCTT+TGG - Chr2:82633275-82633294 None:intergenic 15.0%
!! TAATTGATTAAGTTTATGTT+TGG + Chr2:82631231-82631250 MsG0280011339.01.T01:intron 15.0%
!!! AAAAAGTTAATTTTAAACAG+AGG - Chr2:82635373-82635392 None:intergenic 15.0%
!!! AAAGAAAAAAATGTTGTTTT+TGG + Chr2:82633110-82633129 MsG0280011339.01.T01:intron 15.0%
!!! TAGTTTCAATTTTAATTCTA+CGG - Chr2:82632147-82632166 None:intergenic 15.0%
!!! TTTTTTTTGTACTTAACTTT+GGG + Chr2:82635459-82635478 MsG0280011339.01.T01:three_prime_UTR 15.0%
!! AAATAAGTGCAAAATTGTAA+GGG + Chr2:82633286-82633305 MsG0280011339.01.T01:intron 20.0%
!! AATGTACAATAACTTAAACT+AGG - Chr2:82632913-82632932 None:intergenic 20.0%
!! ACAATCGACAAATAAAATAA+AGG - Chr2:82633574-82633593 None:intergenic 20.0%
!! AGGTTATTAATTCATTAAAC+TGG + Chr2:82631636-82631655 MsG0280011339.01.T01:intron 20.0%
!! ATAAAATCAAAGGTAAAAGT+TGG + Chr2:82633499-82633518 MsG0280011339.01.T01:intron 20.0%
!! ATTTGAATAAAACAATTCAG+TGG + Chr2:82633677-82633696 MsG0280011339.01.T01:CDS 20.0%
!! TAAATAAGTGCAAAATTGTA+AGG + Chr2:82633285-82633304 MsG0280011339.01.T01:intron 20.0%
!!! AAAGGTCTTTAAGTAATTTT+AGG - Chr2:82633213-82633232 None:intergenic 20.0%
!!! AACTTTTACCTTTGATTTTA+TGG - Chr2:82633500-82633519 None:intergenic 20.0%
!!! AAGTTTTAAACACACAAAAA+AGG - Chr2:82633231-82633250 None:intergenic 20.0%
!!! AATATAAGCAGTACTTTTAA+AGG - Chr2:82631913-82631932 None:intergenic 20.0%
!!! AGTTTCAATTTTAATTCTAC+GGG - Chr2:82632146-82632165 None:intergenic 20.0%
!!! ATTTAATCATTTTCTTTTCC+TGG + Chr2:82634143-82634162 MsG0280011339.01.T01:intron 20.0%
!!! CTTTTTTTTGTACTTAACTT+TGG + Chr2:82635458-82635477 MsG0280011339.01.T01:three_prime_UTR 20.0%
!!! GTATCCTTTATTTTGTTTTT+GGG + Chr2:82632734-82632753 MsG0280011339.01.T01:intron 20.0%
!!! GTTTTTGTTGACAAAATATA+TGG - Chr2:82632704-82632723 None:intergenic 20.0%
!!! TAAAAGTACTGCTTATATTT+TGG + Chr2:82631914-82631933 MsG0280011339.01.T01:intron 20.0%
!!! TAATTCATTAAACTGGTTTA+TGG + Chr2:82631643-82631662 MsG0280011339.01.T01:intron 20.0%
!!! TATAATCTCATTTTTCTTTG+TGG + Chr2:82632222-82632241 MsG0280011339.01.T01:intron 20.0%
!!! TATTTTACTTGAATGAGAAT+TGG + Chr2:82634606-82634625 MsG0280011339.01.T01:intron 20.0%
!!! TCAATATATTTTGCAGATAA+TGG - Chr2:82633169-82633188 None:intergenic 20.0%
!!! TGCTGTTTTTTTACTAATAT+TGG + Chr2:82632572-82632591 MsG0280011339.01.T01:intron 20.0%
!!! TGTATCCTTTATTTTGTTTT+TGG + Chr2:82632733-82632752 MsG0280011339.01.T01:intron 20.0%
!!! TGTTTTTTTACTAATATTGG+TGG + Chr2:82632575-82632594 MsG0280011339.01.T01:intron 20.0%
!!! TTGAGAATTTAGTTTTACAT+AGG - Chr2:82633970-82633989 None:intergenic 20.0%
!!! TTTAATCATTTTCTTTTCCT+GGG + Chr2:82634144-82634163 MsG0280011339.01.T01:intron 20.0%
! AAAACTAAAATCTACATGCA+AGG - Chr2:82634193-82634212 None:intergenic 25.0%
! AAAGTTCAAAATGAAAATGC+TGG + Chr2:82631179-82631198 MsG0280011339.01.T01:CDS 25.0%
! AACACCCAAAAACAAAATAA+AGG - Chr2:82632741-82632760 None:intergenic 25.0%
! ACAAAATAAAGGATACATCA+TGG - Chr2:82632730-82632749 None:intergenic 25.0%
! AGAATAACAAACCATACAAT+AGG - Chr2:82632001-82632020 None:intergenic 25.0%
! ATCTATGTCTTATACTTCTT+AGG + Chr2:82631971-82631990 MsG0280011339.01.T01:intron 25.0%
! CAAAGATAAATGAAGAACAT+AGG + Chr2:82635096-82635115 MsG0280011339.01.T01:CDS 25.0%
! CATGTAACAAGTTAAAAGAA+AGG - Chr2:82631869-82631888 None:intergenic 25.0%
! CTGTTATATCAAGGATTAAA+TGG + Chr2:82634837-82634856 MsG0280011339.01.T01:intron 25.0%
! GAATAACAAACCATACAATA+GGG - Chr2:82632000-82632019 None:intergenic 25.0%
! GTTAGAAAAGAAAAGAACAA+CGG - Chr2:82632474-82632493 None:intergenic 25.0%
! GTTGTAAAAATTAAGTGCAA+AGG - Chr2:82634509-82634528 None:intergenic 25.0%
! TAAGTTTATGTTTGGTATCA+CGG + Chr2:82631239-82631258 MsG0280011339.01.T01:intron 25.0%
! TGTGTAAAGCCAAATATAAA+TGG - Chr2:82634765-82634784 None:intergenic 25.0%
! TGTTATATACGAAATGATTG+AGG - Chr2:82632957-82632976 None:intergenic 25.0%
! TTAAAGTAAGAATACCAAGA+TGG - Chr2:82634803-82634822 None:intergenic 25.0%
! TTAAATTTAACCAGGACATT+GGG + Chr2:82634895-82634914 MsG0280011339.01.T01:intron 25.0%
! TTCAAGTAAAATATCCAGTA+TGG - Chr2:82634599-82634618 None:intergenic 25.0%
! TTGTACAGTCCATTTATATT+TGG + Chr2:82634753-82634772 MsG0280011339.01.T01:intron 25.0%
! TTGTATGCTAGTAAATTGAT+AGG + Chr2:82632886-82632905 MsG0280011339.01.T01:intron 25.0%
!! AAATTAGGGATATTTTGTCT+TGG + Chr2:82632397-82632416 MsG0280011339.01.T01:intron 25.0%
!! ACTTAATTTTTACAACAGGA+TGG + Chr2:82634513-82634532 MsG0280011339.01.T01:intron 25.0%
!! AGCATTTTCATTTTGAACTT+TGG - Chr2:82631180-82631199 None:intergenic 25.0%
!! CTTACTTTAAGTTTCAATGT+GGG + Chr2:82634813-82634832 MsG0280011339.01.T01:intron 25.0%
!! TATATCTTTGGTGATAAAGA+TGG - Chr2:82633263-82633282 None:intergenic 25.0%
!! TCTTACTTTAAGTTTCAATG+TGG + Chr2:82634812-82634831 MsG0280011339.01.T01:intron 25.0%
!! TTACTTTAAGTTTCAATGTG+GGG + Chr2:82634814-82634833 MsG0280011339.01.T01:intron 25.0%
!! TTCTAACTTCATTTTGTTCA+AGG + Chr2:82633931-82633950 MsG0280011339.01.T01:intron 25.0%
!! TTGCACTTAATTTTTACAAC+AGG + Chr2:82634509-82634528 MsG0280011339.01.T01:intron 25.0%
!! TTGTAGCTTTTACAAAATCA+CGG - Chr2:82631363-82631382 None:intergenic 25.0%
!! TTGTCTTGTTAAATTTAACC+AGG + Chr2:82634887-82634906 MsG0280011339.01.T01:intron 25.0%
!!! GTCATTTTATTAATGTCTCA+TGG + Chr2:82632059-82632078 MsG0280011339.01.T01:intron 25.0%
!!! TCTTTTCTCTCTTATTTTTC+TGG + Chr2:82633068-82633087 MsG0280011339.01.T01:intron 25.0%
!!! TTATTTTGTTTTTGGGTGTT+AGG + Chr2:82632741-82632760 MsG0280011339.01.T01:intron 25.0%
!!! TTTAACTTGTTACATGTGAA+TGG + Chr2:82631873-82631892 MsG0280011339.01.T01:intron 25.0%
AAAATTAAGTGCAAAGGTTC+TGG - Chr2:82634503-82634522 None:intergenic 30.0%
AATACATTCCCAAGAAAGAT+AGG - Chr2:82634337-82634356 None:intergenic 30.0%
ACTACAAAAACCTGCATTTA+GGG - Chr2:82630965-82630984 None:intergenic 30.0%
ATAACAAAAATAGCTGCAGA+AGG + Chr2:82634018-82634037 MsG0280011339.01.T01:CDS 30.0%
ATATCTTCCTTTGACATTGA+AGG - Chr2:82634999-82635018 None:intergenic 30.0%
ATCAGACTAATAATAGATGC+AGG + Chr2:82634249-82634268 MsG0280011339.01.T01:intron 30.0%
ATGACTTCAAAAGAAGATGA+TGG + Chr2:82631074-82631093 MsG0280011339.01.T01:CDS 30.0%
ATGAGAATTGGCAAATCATT+TGG + Chr2:82634618-82634637 MsG0280011339.01.T01:intron 30.0%
CAATAAACCTTCAATGTCAA+AGG + Chr2:82634989-82635008 MsG0280011339.01.T01:CDS 30.0%
GAATAAAACAATTCAGTGGT+TGG + Chr2:82633681-82633700 MsG0280011339.01.T01:CDS 30.0%
GACATTGAAGGATATCTTAA+TGG - Chr2:82634674-82634693 None:intergenic 30.0%
GACTACTTCCATAAAATCAA+AGG + Chr2:82633489-82633508 MsG0280011339.01.T01:CDS 30.0%
GGAAAAAACCTTTGATACAA+TGG - Chr2:82631848-82631867 None:intergenic 30.0%
GGAAATATTAGATGTGAAAC+TGG - Chr2:82633383-82633402 None:intergenic 30.0%
GTATAAGACATAGATTCTTG+AGG - Chr2:82631966-82631985 None:intergenic 30.0%
GTCTGGATTATGTAACAAAT+AGG - Chr2:82632550-82632569 None:intergenic 30.0%
GTTAAATTTAACCAGGACAT+TGG + Chr2:82634894-82634913 MsG0280011339.01.T01:intron 30.0%
GTTTCTTATTAGTGCATGTT+TGG - Chr2:82631565-82631584 None:intergenic 30.0%
TAACAAAAATAGCTGCAGAA+GGG + Chr2:82634019-82634038 MsG0280011339.01.T01:CDS 30.0%
TATAATTAGTCGGCATCATT+AGG - Chr2:82634560-82634579 None:intergenic 30.0%
TCAGACTAATAATAGATGCA+GGG + Chr2:82634250-82634269 MsG0280011339.01.T01:intron 30.0%
TTCCTCAATGAAGGAAATTA+GGG + Chr2:82632383-82632402 MsG0280011339.01.T01:intron 30.0%
TTTACGAGGAAGAACTAAAT+AGG + Chr2:82635048-82635067 MsG0280011339.01.T01:CDS 30.0%
TTTCCTCAATGAAGGAAATT+AGG + Chr2:82632382-82632401 MsG0280011339.01.T01:intron 30.0%
! AAACTGATTGTGACTTGTAT+TGG + Chr2:82634106-82634125 MsG0280011339.01.T01:intron 30.0%
! AATGATGCCGACTAATTATA+AGG + Chr2:82634560-82634579 MsG0280011339.01.T01:intron 30.0%
! AATGTTTCTGTTCATTCTAG+AGG + Chr2:82633749-82633768 MsG0280011339.01.T01:intron 30.0%
! AGACATTAAGTTTTTGCTTG+AGG + Chr2:82632429-82632448 MsG0280011339.01.T01:intron 30.0%
! AGAGATTAGTTGAGACATAA+TGG + Chr2:82632354-82632373 MsG0280011339.01.T01:intron 30.0%
! AGGATAAAGTCTTATATGCA+AGG - Chr2:82635214-82635233 None:intergenic 30.0%
! ATTGTTTGCTACATATTCCA+GGG + Chr2:82633589-82633608 MsG0280011339.01.T01:intron 30.0%
! CTGTACCTTTTACAAAATCA+CGG - Chr2:82631418-82631437 None:intergenic 30.0%
! CTTCTTCTTGTTCTTTGTTT+CGG - Chr2:82630757-82630776 None:intergenic 30.0%
! TTAAGTTTTTGCTTGAGGAA+AGG + Chr2:82632434-82632453 MsG0280011339.01.T01:intron 30.0%
! TTCTGGAGAAAACTATGTTA+GGG - Chr2:82634486-82634505 None:intergenic 30.0%
! TTTTTGTACTTAACTTTGGG+AGG + Chr2:82635462-82635481 MsG0280011339.01.T01:three_prime_UTR 30.0%
!! ACTTGGGTGTTTTTCAAAAT+TGG + Chr2:82630988-82631007 MsG0280011339.01.T01:five_prime_UTR 30.0%
!! GTACTGCTTATATTTTGGAA+AGG + Chr2:82631919-82631938 MsG0280011339.01.T01:intron 30.0%
!! GTTTGCATTGTTGTTTAATG+AGG + Chr2:82631616-82631635 MsG0280011339.01.T01:intron 30.0%
!! TATTTTGGAAAGGATAGAAG+TGG + Chr2:82631929-82631948 MsG0280011339.01.T01:intron 30.0%
!! TGATAAATGCTTTAGAAGCA+AGG + Chr2:82633897-82633916 MsG0280011339.01.T01:intron 30.0%
!! TGATTGAACTGGTTTGTTTA+GGG + Chr2:82635258-82635277 MsG0280011339.01.T01:three_prime_UTR 30.0%
!! TGCTTCTAAAGCATTTATCA+CGG - Chr2:82633897-82633916 None:intergenic 30.0%
!! TTTGTTATTCTCACTACTTG+TGG + Chr2:82632010-82632029 MsG0280011339.01.T01:intron 30.0%
!!! ACCACTTTTTAGATTTTGGT+GGG + Chr2:82632636-82632655 MsG0280011339.01.T01:intron 30.0%
!!! GCTATTTTTGTTATCTCACT+TGG - Chr2:82634012-82634031 None:intergenic 30.0%
!!! GCTTACCACTTTTTAGATTT+TGG + Chr2:82632632-82632651 MsG0280011339.01.T01:intron 30.0%
!!! TACCACTTTTTAGATTTTGG+TGG + Chr2:82632635-82632654 MsG0280011339.01.T01:intron 30.0%
!!! TAGTAACGTTACACTGATTT+TGG + Chr2:82632666-82632685 MsG0280011339.01.T01:intron 30.0%
!!! TAGTTTGGTTTGCACAATTT+TGG + Chr2:82635293-82635312 MsG0280011339.01.T01:three_prime_UTR 30.0%
AACAGACTAATCAACCAAAC+AGG + Chr2:82630777-82630796 MsG0280011339.01.T01:five_prime_UTR 35.0%
AAGACAATACACTGCATACA+AGG + Chr2:82635328-82635347 MsG0280011339.01.T01:three_prime_UTR 35.0%
AAGCAGCTTTCGAAAAATCA+CGG - Chr2:82631292-82631311 None:intergenic 35.0%
ACTCACGCATAAATTTCATG+AGG - Chr2:82633404-82633423 None:intergenic 35.0%
AGAAGCCAATTAAGATTGCA+TGG + Chr2:82632994-82633013 MsG0280011339.01.T01:intron 35.0%
AGATCACATGAAGTCAATGA+AGG + Chr2:82632853-82632872 MsG0280011339.01.T01:CDS 35.0%
AGCAATTTGCCTATCTTTCT+TGG + Chr2:82634325-82634344 MsG0280011339.01.T01:intron 35.0%
AGTAAAAAAACAGCATCGTC+TGG - Chr2:82632567-82632586 None:intergenic 35.0%
AGTACAAAAAAAAGAGTCCG+TGG - Chr2:82635452-82635471 None:intergenic 35.0%
ATAGTTACCTTATGCATGCT+GGG + Chr2:82632809-82632828 MsG0280011339.01.T01:CDS 35.0%
ATCCAAGTAGTAAGCAATAC+TGG - Chr2:82634423-82634442 None:intergenic 35.0%
ATCCCTAATTTCCTTCATTG+AGG - Chr2:82632388-82632407 None:intergenic 35.0%
CACTACAAAAACCTGCATTT+AGG - Chr2:82630966-82630985 None:intergenic 35.0%
CTTGCAAAATTGGATGTTGT+GGG + Chr2:82634963-82634982 MsG0280011339.01.T01:CDS 35.0%
GAAGAACATAGGAGCAAAAA+TGG + Chr2:82635107-82635126 MsG0280011339.01.T01:CDS 35.0%
GCAATTTGCCTATCTTTCTT+GGG + Chr2:82634326-82634345 MsG0280011339.01.T01:intron 35.0%
GGGATGAAAAGTAGTTAGTT+TGG + Chr2:82635278-82635297 MsG0280011339.01.T01:three_prime_UTR 35.0%
GTGAGAAATCCAGTGAAATT+GGG + Chr2:82631138-82631157 MsG0280011339.01.T01:CDS 35.0%
GTTGGAAAGTCAAGAAGAAA+AGG + Chr2:82633699-82633718 MsG0280011339.01.T01:CDS 35.0%
TAAAAGCTACAATGCCAAAG+TGG + Chr2:82631371-82631390 MsG0280011339.01.T01:intron 35.0%
TAAGCTTTCAGAACTTGCAT+AGG + Chr2:82633785-82633804 MsG0280011339.01.T01:intron 35.0%
TCCCACCAAAATCTAAAAAG+TGG - Chr2:82632640-82632659 None:intergenic 35.0%
TCTTAGGAATCCCTATTGTA+TGG + Chr2:82631987-82632006 MsG0280011339.01.T01:intron 35.0%
TGATGATACAATCGAGATGA+CGG + Chr2:82635175-82635194 MsG0280011339.01.T01:CDS 35.0%
TGTATGCAGTGTATTGTCTT+AGG - Chr2:82635328-82635347 None:intergenic 35.0%
TGTTAGGGACAAAAAAAGCT+AGG - Chr2:82634471-82634490 None:intergenic 35.0%
TTCTGACTTCAACAAGCTTA+TGG + Chr2:82631208-82631227 MsG0280011339.01.T01:CDS 35.0%
TTGTGGAACCATTGTATCAA+AGG + Chr2:82631837-82631856 MsG0280011339.01.T01:CDS 35.0%
TTTGAATGAACCCTAAATGC+AGG + Chr2:82630952-82630971 MsG0280011339.01.T01:intron 35.0%
! AAACCACAAAAGCATGTTGA+AGG + Chr2:82633451-82633470 MsG0280011339.01.T01:CDS 35.0%
! AAGTAGCAGTTGTGTGTTTT+TGG + Chr2:82631589-82631608 MsG0280011339.01.T01:intron 35.0%
! ACGGAGCTTTTGTAAAATCA+GGG + Chr2:82631504-82631523 MsG0280011339.01.T01:intron 35.0%
! ACTCAGGCCTTATAATTAGT+CGG - Chr2:82634570-82634589 None:intergenic 35.0%
! AGTAGCAGTTGTGTGTTTTT+GGG + Chr2:82631590-82631609 MsG0280011339.01.T01:intron 35.0%
! ATCTAAGATGCAAGTCACAA+AGG - Chr2:82633029-82633048 None:intergenic 35.0%
! CATTAAACTGGTTTATGGAC+AGG + Chr2:82631648-82631667 MsG0280011339.01.T01:intron 35.0%
! CTAAATGCAGGTTTTTGTAG+TGG + Chr2:82630964-82630983 MsG0280011339.01.T01:intron 35.0%
! GAACTCTAATTGCACTCTTT+TGG + Chr2:82631768-82631787 MsG0280011339.01.T01:CDS 35.0%
! GATTGTTTGCTACATATTCC+AGG + Chr2:82633588-82633607 MsG0280011339.01.T01:intron 35.0%
! GCGAGTACTAATTTTATCCA+CGG + Chr2:82635432-82635451 MsG0280011339.01.T01:three_prime_UTR 35.0%
! TAGCTTTTACAAAATCACGG+TGG - Chr2:82631360-82631379 None:intergenic 35.0%
! TATTAGCTGGTTCAAGTTTG+AGG - Chr2:82632174-82632193 None:intergenic 35.0%
! TCAAAAGAAGATGATGGTCA+CGG + Chr2:82631080-82631099 MsG0280011339.01.T01:CDS 35.0%
! TGGTTTTCTTTCCTCAATGA+AGG + Chr2:82632374-82632393 MsG0280011339.01.T01:intron 35.0%
! TGTCACCGTGATTTTGTAAA+AGG + Chr2:82631410-82631429 MsG0280011339.01.T01:intron 35.0%
! TTGAACTTTGGTCTTCTTGT+TGG - Chr2:82631168-82631187 None:intergenic 35.0%
! TTTGTTATCTCACTTGGATC+TGG - Chr2:82634006-82634025 None:intergenic 35.0%
! TTTTTCCTCGAGAGAACATA+TGG - Chr2:82634067-82634086 None:intergenic 35.0%
!! AACATGCTTTTGTGGTTTGT+GGG - Chr2:82633449-82633468 None:intergenic 35.0%
!! AGGTTTTTGTAGTGGAACTT+GGG + Chr2:82630972-82630991 MsG0280011339.01.T01:intron 35.0%
!! CTGATTGAACTGGTTTGTTT+AGG + Chr2:82635257-82635276 MsG0280011339.01.T01:three_prime_UTR 35.0%
!! GTTCTGGAGAAAACTATGTT+AGG - Chr2:82634487-82634506 None:intergenic 35.0%
!! TAATAGCCAAGAAGGTACTA+GGG + Chr2:82632189-82632208 MsG0280011339.01.T01:intron 35.0%
!! TTTTGGAAAGAGACCAACTT+TGG + Chr2:82631106-82631125 MsG0280011339.01.T01:CDS 35.0%
!!! TCTTTTGAAGTCATCCATGA+TGG - Chr2:82631068-82631087 None:intergenic 35.0%
!!! TTGTTTTTGGGTGTTAGGAT+TGG + Chr2:82632746-82632765 MsG0280011339.01.T01:intron 35.0%
AAAGTGGCTATGCGAAATCA+CGG + Chr2:82631387-82631406 MsG0280011339.01.T01:intron 40.0%
AAGAGACCAACTTTGGATGA+AGG + Chr2:82631113-82631132 MsG0280011339.01.T01:CDS 40.0%
AAGCTAGGATGGCAATGATT+AGG - Chr2:82634456-82634475 None:intergenic 40.0%
AATGTGGGGCTGTTATATCA+AGG + Chr2:82634828-82634847 MsG0280011339.01.T01:intron 40.0%
ACAAATGCTGCATCTTCTTC+TGG + Chr2:82635134-82635153 MsG0280011339.01.T01:CDS 40.0%
AGATATCCACAAACTAGCAC+TGG + Chr2:82635013-82635032 MsG0280011339.01.T01:CDS 40.0%
AGCTTCAACTTGTCGAAACT+TGG - Chr2:82631815-82631834 None:intergenic 40.0%
AGGGACAAAAAAAGCTAGGA+TGG - Chr2:82634467-82634486 None:intergenic 40.0%
ATGGAAGTAGTCTCCTTTGA+AGG - Chr2:82633481-82633500 None:intergenic 40.0%
ATGTTCTCTCGAGGAAAAAC+AGG + Chr2:82634068-82634087 MsG0280011339.01.T01:CDS 40.0%
CAATTTCAACGAGTTTCCTC+TGG - Chr2:82632789-82632808 None:intergenic 40.0%
CACCAGTATTGCTTACTACT+TGG + Chr2:82634418-82634437 MsG0280011339.01.T01:intron 40.0%
CAGCTCCATGCAATCTTAAT+TGG - Chr2:82633002-82633021 None:intergenic 40.0%
CCAATTGTCAACGACATTGA+AGG - Chr2:82634686-82634705 None:intergenic 40.0%
CCTTCAATGTCGTTGACAAT+TGG + Chr2:82634683-82634702 MsG0280011339.01.T01:intron 40.0%
GAAAAGACATTGACGATCCT+AGG + Chr2:82633611-82633630 MsG0280011339.01.T01:CDS 40.0%
GATAGTTACCTTATGCATGC+TGG + Chr2:82632808-82632827 MsG0280011339.01.T01:CDS 40.0%
GCTTCAACTTGTCGAAACTT+GGG - Chr2:82631814-82631833 None:intergenic 40.0%
GCTTGCAAAATTGGATGTTG+TGG + Chr2:82634962-82634981 MsG0280011339.01.T01:CDS 40.0%
GGACTGCAAATGTATTTACG+AGG + Chr2:82635034-82635053 MsG0280011339.01.T01:CDS 40.0%
GGTGAGAAATCCAGTGAAAT+TGG + Chr2:82631137-82631156 MsG0280011339.01.T01:CDS 40.0%
GTAAGAATACCAAGATGGCA+CGG - Chr2:82634798-82634817 None:intergenic 40.0%
TAATCCAAGCCTTTCACTGA+GGG + Chr2:82632520-82632539 MsG0280011339.01.T01:intron 40.0%
TCCAGTATGGCTATATACTC+AGG - Chr2:82634586-82634605 None:intergenic 40.0%
TGTCATTCAGTGTGATGACT+CGG - Chr2:82634644-82634663 None:intergenic 40.0%
TGTTGAGGAGCTTGCAAAAT+TGG + Chr2:82634953-82634972 MsG0280011339.01.T01:CDS 40.0%
TTACTTATATTGCCACTCCC+AGG - Chr2:82634164-82634183 None:intergenic 40.0%
TTAGTGCGTGTTTGGTATCA+TGG + Chr2:82631310-82631329 MsG0280011339.01.T01:intron 40.0%
TTGGAAAGGATAGAAGTGGA+AGG + Chr2:82631933-82631952 MsG0280011339.01.T01:intron 40.0%
TTTACAAAAGCTCCGTGCAT+TGG - Chr2:82631500-82631519 None:intergenic 40.0%
! AAACTGGTTTATGGACAGGA+AGG + Chr2:82631652-82631671 MsG0280011339.01.T01:intron 40.0%
! AGGTGTAGTTTTTGTGCTGT+CGG + Chr2:82631672-82631691 MsG0280011339.01.T01:CDS 40.0%
! ATTCTTACCTCGAGTTGTTG+AGG + Chr2:82634938-82634957 MsG0280011339.01.T01:CDS 40.0%
! CAACATGCTTTTGTGGTTTG+TGG - Chr2:82633450-82633469 None:intergenic 40.0%
! CACGGAGCTTTTGTAAAATC+AGG + Chr2:82631503-82631522 MsG0280011339.01.T01:intron 40.0%
! GAGCTTTTGTAAAATCAGGG+TGG + Chr2:82631507-82631526 MsG0280011339.01.T01:intron 40.0%
! TAGCGTCAATTACTGACTGT+AGG + Chr2:82632296-82632315 MsG0280011339.01.T01:intron 40.0%
! TCATTTTCTTTTCCTGGGAG+TGG + Chr2:82634149-82634168 MsG0280011339.01.T01:intron 40.0%
! TCTCCTTCAACATGCTTTTG+TGG - Chr2:82633457-82633476 None:intergenic 40.0%
! TGCTGTAGTGTCTTAGTTTG+CGG + Chr2:82632323-82632342 MsG0280011339.01.T01:intron 40.0%
! TTGAAGTCATCCATGATGGA+AGG - Chr2:82631064-82631083 None:intergenic 40.0%
!! ACATGCTTTTGTGGTTTGTG+GGG - Chr2:82633448-82633467 None:intergenic 40.0%
!! CAGGTTTTTGTAGTGGAACT+TGG + Chr2:82630971-82630990 MsG0280011339.01.T01:intron 40.0%
!! CTAATAGCCAAGAAGGTACT+AGG + Chr2:82632188-82632207 MsG0280011339.01.T01:intron 40.0%
!! GATGATGGTCACGGAAATTT+TGG + Chr2:82631089-82631108 MsG0280011339.01.T01:CDS 40.0%
!! TGTCGAAACTTGGGAGTATT+TGG - Chr2:82631805-82631824 None:intergenic 40.0%
!!! TGTTTTTGGAGCAGAATCAC+TGG + Chr2:82633124-82633143 MsG0280011339.01.T01:intron 40.0%
AAAGCTGCTTAGTGCGTGTT+TGG + Chr2:82631302-82631321 MsG0280011339.01.T01:intron 45.0%
AATCCAAGCCTTTCACTGAG+GGG + Chr2:82632521-82632540 MsG0280011339.01.T01:intron 45.0%
AATGGGAGCAGAGTATAAGC+AGG + Chr2:82631741-82631760 MsG0280011339.01.T01:CDS 45.0%
ACGGTGGCTCAATGTGATTA+TGG - Chr2:82631273-82631292 None:intergenic 45.0%
AGACCAACTTTGGATGAAGG+TGG + Chr2:82631116-82631135 MsG0280011339.01.T01:CDS 45.0%
AGATGCCATATGTTCTCTCG+AGG + Chr2:82634059-82634078 MsG0280011339.01.T01:CDS 45.0%
ATAGGATTCCCCTCAGTGAA+AGG - Chr2:82632532-82632551 None:intergenic 45.0%
ATGGTTTCCCAGCATGCATA+AGG - Chr2:82632819-82632838 None:intergenic 45.0%
ATTCTCACTACTTGTGGCGT+GGG + Chr2:82632016-82632035 MsG0280011339.01.T01:intron 45.0%
CAGCTTTCGAAAAATCACGG+TGG - Chr2:82631289-82631308 None:intergenic 45.0%
CCAAGAGAAACCTTCCATCA+TGG + Chr2:82631051-82631070 MsG0280011339.01.T01:CDS 45.0%
CCAGTTCAATCAGCATTCAC+AGG - Chr2:82635250-82635269 None:intergenic 45.0%
CTAATCCAAGCCTTTCACTG+AGG + Chr2:82632519-82632538 MsG0280011339.01.T01:intron 45.0%
GAACCAGCTAATAGCCAAGA+AGG + Chr2:82632181-82632200 MsG0280011339.01.T01:intron 45.0%
GCCTGAGTATATAGCCATAC+TGG + Chr2:82634582-82634601 MsG0280011339.01.T01:intron 45.0%
GTACCTTCTTGGCTATTAGC+TGG - Chr2:82632187-82632206 None:intergenic 45.0%
GTGATTTCGCATAGCCACTT+TGG - Chr2:82631388-82631407 None:intergenic 45.0%
GTTGGAAGACCCAATTTCAC+TGG - Chr2:82631150-82631169 None:intergenic 45.0%
TATTCTCACTACTTGTGGCG+TGG + Chr2:82632015-82632034 MsG0280011339.01.T01:intron 45.0%
TCACAGGTGACACATCTTAG+AGG - Chr2:82635234-82635253 None:intergenic 45.0%
TCACCACCTTCATCCAAAGT+TGG - Chr2:82631122-82631141 None:intergenic 45.0%
TGTAAAATCAGGGTGGTTCG+CGG + Chr2:82631514-82631533 MsG0280011339.01.T01:intron 45.0%
TGTTGAAGGAGAGCCTTCAA+AGG + Chr2:82633465-82633484 MsG0280011339.01.T01:CDS 45.0%
TTATGCATGCTGGGAAACCA+TGG + Chr2:82632818-82632837 MsG0280011339.01.T01:CDS 45.0%
! CCATGATGGAAGGTTTCTCT+TGG - Chr2:82631054-82631073 None:intergenic 45.0%
! CCTGTGAATGCTGATTGAAC+TGG + Chr2:82635247-82635266 MsG0280011339.01.T01:exon 45.0%
! CGACAAGTTGAAGCTGATTG+TGG + Chr2:82631820-82631839 MsG0280011339.01.T01:CDS 45.0%
! GAAGGCTCAAAGCATTTCCT+AGG - Chr2:82633631-82633650 None:intergenic 45.0%
! GATCGTCAATGTCTTTTCCC+TGG - Chr2:82633609-82633628 None:intergenic 45.0%
! GGTGTAGTTTTTGTGCTGTC+GGG + Chr2:82631673-82631692 MsG0280011339.01.T01:CDS 45.0%
!! AGCCTTCTGAAGTGAAGAAG+TGG + Chr2:82633644-82633663 MsG0280011339.01.T01:CDS 45.0%
!! GCCTTCTGAAGTGAAGAAGT+GGG + Chr2:82633645-82633664 MsG0280011339.01.T01:CDS 45.0%
!! TGTAGTGTCTTAGTTTGCGG+TGG + Chr2:82632326-82632345 MsG0280011339.01.T01:intron 45.0%
!! TTCGGCGCTGTGTTTGATTT+TGG - Chr2:82630739-82630758 None:intergenic 45.0%
!!! GGGAGGAGTACCTGAATTTT+CGG + Chr2:82635479-82635498 MsG0280011339.01.T01:three_prime_UTR 45.0%
!!! ATTTTTCAAATATTATTTAT+TGG + Chr2:82632603-82632622 MsG0280011339.01.T01:intron 5.0%
AGAGGCAAGTCTCATAGACC+TGG - Chr2:82635355-82635374 None:intergenic 50.0%
AGGTCGCGTGCTATGGAAAT+GGG + Chr2:82631724-82631743 MsG0280011339.01.T01:CDS 50.0%
ATACACTGCATACAAGGCCC+AGG + Chr2:82635334-82635353 MsG0280011339.01.T01:three_prime_UTR 50.0%
ATTCCCCTCAGTGAAAGGCT+TGG - Chr2:82632527-82632546 None:intergenic 50.0%
CAGTTACTCTCCCAATGTCC+TGG - Chr2:82634908-82634927 None:intergenic 50.0%
CCCACCATGATACCAATGCA+CGG + Chr2:82631485-82631504 MsG0280011339.01.T01:intron 50.0%
CTCACTTGGATCTGGCTGAA+AGG - Chr2:82633998-82634017 None:intergenic 50.0%
GAGATGCCCTAGTACCTTCT+TGG - Chr2:82632198-82632217 None:intergenic 50.0%
GAGCAGAGTATAAGCAGGAC+TGG + Chr2:82631746-82631765 MsG0280011339.01.T01:CDS 50.0%
GAGGCAAGTCTCATAGACCT+GGG - Chr2:82635354-82635373 None:intergenic 50.0%
GAGGTTGGCAAACATGCATG+TGG - Chr2:82633331-82633350 None:intergenic 50.0%
GATCTACCTCCTTTACGCCA+TGG - Chr2:82632838-82632857 None:intergenic 50.0%
GCCCACTTCTTCACTTCAGA+AGG - Chr2:82633649-82633668 None:intergenic 50.0%
GGACATTGGGAGAGTAACTG+AGG + Chr2:82634908-82634927 MsG0280011339.01.T01:intron 50.0%
GTCTGAATTCCGTGCCATCT+TGG + Chr2:82634786-82634805 MsG0280011339.01.T01:intron 50.0%
GTGAAACTGGACCGAGACAA+CGG - Chr2:82633370-82633389 None:intergenic 50.0%
GTGAGCTGCAAGGCTAACAA+AGG - Chr2:82635403-82635422 None:intergenic 50.0%
TTGGGAGAGTAACTGAGGAC+TGG + Chr2:82634913-82634932 MsG0280011339.01.T01:CDS 50.0%
! AGCTCCGTGCATTGGTATCA+TGG - Chr2:82631492-82631511 None:intergenic 50.0%
! CCGTGCATTGGTATCATGGT+GGG - Chr2:82631488-82631507 None:intergenic 50.0%
! TCCGTGCATTGGTATCATGG+TGG - Chr2:82631489-82631508 None:intergenic 50.0%
! TGCAGTCCAGTGCTAGTTTG+TGG - Chr2:82635022-82635041 None:intergenic 50.0%
! TGTGGTTTGTGGGGTACAGA+TGG - Chr2:82633439-82633458 None:intergenic 50.0%
!! GCTGTCGGGTTTTGTGAATC+CGG + Chr2:82631687-82631706 MsG0280011339.01.T01:CDS 50.0%
!! TGCAAGAGTGTTACAGCCAG+AGG + Chr2:82632770-82632789 MsG0280011339.01.T01:CDS 50.0%
AGGGTGGTTCGCGGTGATTT+GGG + Chr2:82631523-82631542 MsG0280011339.01.T01:intron 55.0%
CAAAGCAGACGTGAGCTGCA+AGG - Chr2:82635413-82635432 None:intergenic 55.0%
CAAGTCCCACACCGTTGTCT+CGG + Chr2:82633356-82633375 MsG0280011339.01.T01:intron 55.0%
CATCTTGAGGTCGCGTGCTA+TGG + Chr2:82631717-82631736 MsG0280011339.01.T01:CDS 55.0%
GAGACAACGGTGTGGGACTT+GGG - Chr2:82633357-82633376 None:intergenic 55.0%
GAGGTCGCGTGCTATGGAAA+TGG + Chr2:82631723-82631742 MsG0280011339.01.T01:CDS 55.0%
GCAAGCTCCTCAACAACTCG+AGG - Chr2:82634948-82634967 None:intergenic 55.0%
GCTGGGAAACCATGGCGTAA+AGG + Chr2:82632826-82632845 MsG0280011339.01.T01:CDS 55.0%
GGGAAACCATGGCGTAAAGG+AGG + Chr2:82632829-82632848 MsG0280011339.01.T01:CDS 55.0%
!! GGTTTTGTGAATCCGGAGCG+TGG + Chr2:82631694-82631713 MsG0280011339.01.T01:CDS 55.0%
ACTGGACCGAGACAACGGTG+TGG - Chr2:82633365-82633384 None:intergenic 60.0%
ATCCGGAGCGTGGCATCTTG+AGG + Chr2:82631704-82631723 MsG0280011339.01.T01:CDS 60.0%
CAACGGTGTGGGACTTGGGT+AGG - Chr2:82633353-82633372 None:intergenic 60.0%
CAGGGTGGTTCGCGGTGATT+TGG + Chr2:82631522-82631541 MsG0280011339.01.T01:intron 60.0%
CGAGACAACGGTGTGGGACT+TGG - Chr2:82633358-82633377 None:intergenic 60.0%
CTGGACCGAGACAACGGTGT+GGG - Chr2:82633364-82633383 None:intergenic 60.0%
GACCTCAAGATGCCACGCTC+CGG - Chr2:82631709-82631728 None:intergenic 60.0%
GTGGGACTTGGGTAGGAGGT+TGG - Chr2:82633346-82633365 None:intergenic 60.0%
CGGTGTGGGACTTGGGTAGG+AGG - Chr2:82633350-82633369 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 82630728 82635508 82630728 ID=MsG0280011339.01;Name=MsG0280011339.01
Chr2 mRNA 82630728 82635508 82630728 ID=MsG0280011339.01.T01;Parent=MsG0280011339.01;Name=MsG0280011339.01.T01;_AED=0.49;_eAED=0.49;_QI=141|1|1|1|0.85|0.75|8|255|370
Chr2 exon 82630728 82630798 82630728 ID=MsG0280011339.01.T01:exon:12276;Parent=MsG0280011339.01.T01
Chr2 exon 82630974 82631229 82630974 ID=MsG0280011339.01.T01:exon:12277;Parent=MsG0280011339.01.T01
Chr2 exon 82631670 82631858 82631670 ID=MsG0280011339.01.T01:exon:12278;Parent=MsG0280011339.01.T01
Chr2 exon 82632763 82632874 82632763 ID=MsG0280011339.01.T01:exon:12279;Parent=MsG0280011339.01.T01
Chr2 exon 82633428 82633510 82633428 ID=MsG0280011339.01.T01:exon:12280;Parent=MsG0280011339.01.T01
Chr2 exon 82633610 82633720 82633610 ID=MsG0280011339.01.T01:exon:12281;Parent=MsG0280011339.01.T01
Chr2 exon 82634003 82634089 82634003 ID=MsG0280011339.01.T01:exon:12282;Parent=MsG0280011339.01.T01
Chr2 exon 82634909 82635508 82634909 ID=MsG0280011339.01.T01:exon:12283;Parent=MsG0280011339.01.T01
Chr2 five_prime_UTR 82630728 82630798 82630728 ID=MsG0280011339.01.T01:five_prime_utr;Parent=MsG0280011339.01.T01
Chr2 five_prime_UTR 82630974 82631043 82630974 ID=MsG0280011339.01.T01:five_prime_utr;Parent=MsG0280011339.01.T01
Chr2 CDS 82631044 82631229 82631044 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 CDS 82631670 82631858 82631670 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 CDS 82632763 82632874 82632763 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 CDS 82633428 82633510 82633428 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 CDS 82633610 82633720 82633610 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 CDS 82634003 82634089 82634003 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 CDS 82634909 82635253 82634909 ID=MsG0280011339.01.T01:cds;Parent=MsG0280011339.01.T01
Chr2 three_prime_UTR 82635254 82635508 82635254 ID=MsG0280011339.01.T01:three_prime_utr;Parent=MsG0280011339.01.T01
Gene Sequence

>MsG0280011339.01.T01

ATGTCTTCCAAGAGAAACCTTCCATCATGGATGACTTCAAAAGAAGATGATGGTCACGGAAATTTTGGAAAGAGACCAACTTTGGATGAAGGTGGTGAGAAATCCAGTGAAATTGGGTCTTCCAACAAGAAGACCAAAGTTCAAAATGAAAATGCTGGAAAATCTTCTGACTTCAACAAGCTTATGGAAGGTGTAGTTTTTGTGCTGTCGGGTTTTGTGAATCCGGAGCGTGGCATCTTGAGGTCGCGTGCTATGGAAATGGGAGCAGAGTATAAGCAGGACTGGAACTCTAATTGCACTCTTTTGGTTTGTGCATTTCCAAATACTCCCAAGTTTCGACAAGTTGAAGCTGATTGTGGAACCATTGTATCAAAGGATTGGATGCAAGAGTGTTACAGCCAGAGGAAACTCGTTGAAATTGATAGTTACCTTATGCATGCTGGGAAACCATGGCGTAAAGGAGGTAGATCACATGAAGTCAATGAAGAACAAAAACCATCTGTACCCCACAAACCACAAAAGCATGTTGAAGGAGAGCCTTCAAAGGAGACTACTTCCATAAAATCAAAGGGAAAAGACATTGACGATCCTAGGAAATGCTTTGAGCCTTCTGAAGTGAAGAAGTGGGCTCTTGATGATTTGAATAAAACAATTCAGTGGTTGGAAAGTCAAGAAGAAAAGCCAGATCCAAGTGAGATAACAAAAATAGCTGCAGAAGGGATTCTGACTTGTTTGCAAGATGCCATATGTTCTCTCGAGGAAAAACAGGACATTGGGAGAGTAACTGAGGACTGGAAATTCTTACCTCGAGTTGTTGAGGAGCTTGCAAAATTGGATGTTGTGGGAAACAATAAACCTTCAATGTCAAAGGAAGATATCCACAAACTAGCACTGGACTGCAAATGTATTTACGAGGAAGAACTAAATAGGTTAGATCATGAATCGACAAAGAAATCAAAGATAAATGAAGAACATAGGAGCAAAAATGGAAGAACAAATGCTGCATCTTCTTCTGGTGCAGTTGACTATGATAGTGATGATACAATCGAGATGACGGAACAAGAAATAGACCTTGCATATAAGACTTTATCCTCTAAGATGTGTCACCTGTGA

Protein sequence

>MsG0280011339.01.T01

MSSKRNLPSWMTSKEDDGHGNFGKRPTLDEGGEKSSEIGSSNKKTKVQNENAGKSSDFNKLMEGVVFVLSGFVNPERGILRSRAMEMGAEYKQDWNSNCTLLVCAFPNTPKFRQVEADCGTIVSKDWMQECYSQRKLVEIDSYLMHAGKPWRKGGRSHEVNEEQKPSVPHKPQKHVEGEPSKETTSIKSKGKDIDDPRKCFEPSEVKKWALDDLNKTIQWLESQEEKPDPSEITKIAAEGILTCLQDAICSLEEKQDIGRVTEDWKFLPRVVEELAKLDVVGNNKPSMSKEDIHKLALDCKCIYEEELNRLDHESTKKSKINEEHRSKNGRTNAASSSGAVDYDSDDTIEMTEQEIDLAYKTLSSKMCHL*