Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017947.01.T01 | KEH36340.1 | 91.971 | 137 | 10 | 1 | 1 | 136 | 1 | 137 | 1.65E-75 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017947.01.T01 | A0A072VDW6 | 91.971 | 137 | 10 | 1 | 1 | 136 | 1 | 137 | 7.87e-76 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048065.01 | MsG0380017947.01 | 0.807293 | 5.426668e-50 | 3.011180e-47 |
| MsG0080048152.01 | MsG0380017947.01 | 0.830518 | 2.806886e-55 | 2.964109e-52 |
| MsG0080048784.01 | MsG0380017947.01 | 0.810928 | 9.032240e-51 | 5.516544e-48 |
| MsG0180000139.01 | MsG0380017947.01 | 0.848611 | 5.489900e-60 | 1.013055e-56 |
| MsG0180000210.01 | MsG0380017947.01 | 0.806330 | 8.670554e-50 | 4.693170e-47 |
| MsG0180000355.01 | MsG0380017947.01 | 0.800526 | 1.382947e-48 | 6.453668e-46 |
| MsG0180000404.01 | MsG0380017947.01 | 0.803241 | 3.829671e-49 | 1.914747e-46 |
| MsG0180000576.01 | MsG0380017947.01 | 0.809289 | 2.036434e-50 | 1.190941e-47 |
| MsG0180000624.01 | MsG0380017947.01 | 0.817854 | 2.656353e-52 | 1.956738e-49 |
| MsG0180000806.01 | MsG0380017947.01 | 0.835227 | 1.897636e-56 | 2.306035e-53 |
| MsG0180000835.01 | MsG0380017947.01 | 0.885587 | 7.149372e-72 | 4.935908e-68 |
| MsG0180001118.01 | MsG0380017947.01 | 0.805038 | 1.619098e-49 | 8.478206e-47 |
| MsG0180001356.01 | MsG0380017947.01 | 0.869833 | 2.302713e-66 | 8.764272e-63 |
| MsG0180002547.01 | MsG0380017947.01 | 0.870959 | 9.839432e-67 | 3.900405e-63 |
| MsG0180002794.01 | MsG0380017947.01 | 0.847016 | 1.510026e-59 | 2.647601e-56 |
| MsG0180003651.01 | MsG0380017947.01 | 0.850835 | 1.312763e-60 | 2.605367e-57 |
| MsG0180004046.01 | MsG0380017947.01 | 0.813645 | 2.304682e-51 | 1.513546e-48 |
| MsG0180004062.01 | MsG0380017947.01 | 0.808525 | 2.967803e-50 | 1.700815e-47 |
| MsG0180004389.01 | MsG0380017947.01 | 0.815351 | 9.667535e-52 | 6.649356e-49 |
| MsG0180004481.01 | MsG0380017947.01 | 0.841460 | 4.690027e-58 | 6.896349e-55 |
| MsG0180004482.01 | MsG0380017947.01 | 0.837567 | 4.818000e-57 | 6.283336e-54 |
| MsG0180004509.01 | MsG0380017947.01 | 0.821050 | 4.961014e-53 | 3.993149e-50 |
| MsG0180004854.01 | MsG0380017947.01 | 0.820282 | 7.448763e-53 | 5.868362e-50 |
| MsG0180004861.01 | MsG0380017947.01 | 0.854574 | 1.124040e-61 | 2.521617e-58 |
| MsG0180004928.01 | MsG0380017947.01 | 0.813569 | 2.394985e-51 | 1.569602e-48 |
| MsG0180005169.01 | MsG0380017947.01 | 0.865271 | 6.665616e-65 | 2.155697e-61 |
| MsG0180005193.01 | MsG0380017947.01 | 0.820803 | 5.654295e-53 | 4.519630e-50 |
| MsG0180005334.01 | MsG0380017947.01 | 0.829986 | 3.786627e-55 | 3.937847e-52 |
| MsG0180005424.01 | MsG0380017947.01 | 0.808648 | 2.792967e-50 | 1.605681e-47 |
| MsG0180005575.01 | MsG0380017947.01 | 0.810134 | 1.340774e-50 | 8.017649e-48 |
| MsG0180005746.01 | MsG0380017947.01 | 0.804494 | 2.102365e-49 | 1.085524e-46 |
| MsG0180005990.01 | MsG0380017947.01 | 0.827482 | 1.527107e-54 | 1.476191e-51 |
| MsG0180006017.01 | MsG0380017947.01 | 0.816887 | 4.385391e-52 | 3.145830e-49 |
| MsG0180006096.01 | MsG0380017947.01 | 0.834622 | 2.695168e-56 | 3.215974e-53 |
| MsG0180006144.01 | MsG0380017947.01 | 0.815976 | 7.015506e-52 | 4.908540e-49 |
| MsG0180006224.01 | MsG0380017947.01 | 0.842229 | 2.937364e-58 | 4.424089e-55 |
| MsG0280006405.01 | MsG0380017947.01 | 0.813155 | 2.952773e-51 | 1.913358e-48 |
| MsG0280010595.01 | MsG0380017947.01 | 0.849421 | 3.269932e-60 | 6.195036e-57 |
| MsG0280010776.01 | MsG0380017947.01 | 0.856673 | 2.745098e-62 | 6.601858e-59 |
| MsG0280010778.01 | MsG0380017947.01 | 0.809297 | 2.028850e-50 | 1.186732e-47 |
| MsG0280011101.01 | MsG0380017947.01 | 0.821225 | 4.520954e-53 | 3.656467e-50 |
| MsG0280011339.01 | MsG0380017947.01 | 0.870796 | 1.112803e-66 | 4.384801e-63 |
| MsG0280011371.01 | MsG0380017947.01 | 0.822317 | 2.527034e-53 | 2.107869e-50 |
| MsG0280011388.01 | MsG0380017947.01 | 0.820360 | 7.147957e-53 | 5.643503e-50 |
| MsG0380011516.01 | MsG0380017947.01 | 0.826218 | 3.061202e-54 | 2.852906e-51 |
| MsG0380011581.01 | MsG0380017947.01 | 0.870447 | 1.449100e-66 | 5.638899e-63 |
| MsG0380011614.01 | MsG0380017947.01 | 0.803197 | 3.910046e-49 | 1.952779e-46 |
| MsG0380011747.01 | MsG0380017947.01 | 0.830721 | 2.503300e-55 | 2.659584e-52 |
| MsG0380012122.01 | MsG0380017947.01 | 0.817228 | 3.677516e-52 | 2.662689e-49 |
| MsG0380012570.01 | MsG0380017947.01 | 0.834349 | 3.156204e-56 | 3.735564e-53 |
| MsG0380013085.01 | MsG0380017947.01 | 0.858062 | 1.066178e-62 | 2.686846e-59 |
| MsG0380013183.01 | MsG0380017947.01 | 0.801056 | 1.078127e-48 | 5.099678e-46 |
| MsG0380014537.01 | MsG0380017947.01 | 0.806574 | 7.699543e-50 | 4.193628e-47 |
| MsG0380014778.01 | MsG0380017947.01 | 0.821962 | 3.055297e-53 | 2.522626e-50 |
| MsG0380014797.01 | MsG0380017947.01 | 0.803599 | 3.228040e-49 | 1.628951e-46 |
| MsG0380014875.01 | MsG0380017947.01 | 0.843228 | 1.594325e-58 | 2.477810e-55 |
| MsG0380014876.01 | MsG0380017947.01 | 0.825331 | 4.969760e-54 | 4.516226e-51 |
| MsG0380015027.01 | MsG0380017947.01 | 0.836490 | 9.078133e-57 | 1.145751e-53 |
| MsG0380015216.01 | MsG0380017947.01 | 0.803768 | 2.977247e-49 | 1.508898e-46 |
| MsG0380015435.01 | MsG0380017947.01 | 0.879713 | 9.952561e-70 | 5.452470e-66 |
| MsG0380015555.01 | MsG0380017947.01 | 0.815903 | 7.283845e-52 | 5.085930e-49 |
| MsG0380016067.01 | MsG0380017947.01 | 0.808049 | 3.749047e-50 | 2.121702e-47 |
| MsG0380016126.01 | MsG0380017947.01 | 0.832408 | 9.616794e-56 | 1.073985e-52 |
| MsG0380016133.01 | MsG0380017947.01 | 0.818699 | 1.710699e-52 | 1.289713e-49 |
| MsG0380016290.01 | MsG0380017947.01 | 0.859074 | 5.317171e-63 | 1.386602e-59 |
| MsG0380016505.01 | MsG0380017947.01 | 0.855610 | 5.622391e-62 | 1.305411e-58 |
| MsG0380016529.01 | MsG0380017947.01 | 0.833085 | 6.528380e-56 | 7.439856e-53 |
| MsG0380016559.01 | MsG0380017947.01 | 0.860899 | 1.496701e-63 | 4.156312e-60 |
| MsG0380016560.01 | MsG0380017947.01 | 0.872949 | 2.146733e-67 | 9.151044e-64 |
| MsG0380016671.01 | MsG0380017947.01 | 0.832038 | 1.187549e-55 | 1.311795e-52 |
| MsG0380016970.01 | MsG0380017947.01 | 0.812273 | 4.606489e-51 | 2.916025e-48 |
| MsG0380017258.01 | MsG0380017947.01 | 0.819350 | 1.216399e-52 | 9.336733e-50 |
| MsG0380017461.01 | MsG0380017947.01 | 0.822339 | 2.497953e-53 | 2.084958e-50 |
| MsG0380017498.01 | MsG0380017947.01 | 0.811634 | 6.346502e-51 | 3.948645e-48 |
| MsG0380017540.01 | MsG0380017947.01 | 0.839973 | 1.149709e-57 | 1.614413e-54 |
| MsG0380017947.01 | MsG0380018033.01 | 0.808402 | 3.152740e-50 | 1.801003e-47 |
| MsG0380017947.01 | MsG0480018110.01 | 0.825147 | 5.492350e-54 | 4.965273e-51 |
| MsG0380017947.01 | MsG0480018124.01 | 0.809834 | 1.555830e-50 | 9.231164e-48 |
| MsG0380017947.01 | MsG0480018278.01 | 0.835423 | 1.692765e-56 | 2.069082e-53 |
| MsG0380017947.01 | MsG0480018319.01 | 0.819369 | 1.204430e-52 | 9.249796e-50 |
| MsG0380017947.01 | MsG0480019206.01 | 0.812490 | 4.130342e-51 | 2.629855e-48 |
| MsG0380017947.01 | MsG0480019409.01 | 0.815210 | 1.038930e-51 | 7.117735e-49 |
| MsG0380017947.01 | MsG0480019416.01 | 0.817267 | 3.603847e-52 | 2.612074e-49 |
| MsG0380017947.01 | MsG0480020675.01 | 0.805996 | 1.019205e-49 | 5.470249e-47 |
| MsG0380017947.01 | MsG0480020836.01 | 0.802064 | 6.698892e-49 | 3.250271e-46 |
| MsG0380017947.01 | MsG0480021037.01 | 0.828531 | 8.535941e-55 | 8.507390e-52 |
| MsG0380017947.01 | MsG0480021056.01 | 0.804025 | 2.633307e-49 | 1.343447e-46 |
| MsG0380017947.01 | MsG0480021465.01 | 0.803528 | 3.338612e-49 | 1.681717e-46 |
| MsG0380017947.01 | MsG0480021706.01 | 0.814852 | 1.247294e-51 | 8.463123e-49 |
| MsG0380017947.01 | MsG0480021750.01 | 0.856195 | 3.790391e-62 | 8.973656e-59 |
| MsG0380017947.01 | MsG0480021768.01 | 0.808458 | 3.066838e-50 | 1.754519e-47 |
| MsG0380017947.01 | MsG0480022223.01 | 0.817996 | 2.467958e-52 | 1.824997e-49 |
| MsG0380017947.01 | MsG0480022707.01 | 0.807190 | 5.704129e-50 | 3.156701e-47 |
| MsG0380017947.01 | MsG0480022780.01 | 0.806561 | 7.747765e-50 | 4.218571e-47 |
| MsG0380017947.01 | MsG0480022855.01 | 0.833349 | 5.613681e-56 | 6.448112e-53 |
| MsG0380017947.01 | MsG0480022877.01 | 0.807860 | 4.112580e-50 | 2.315833e-47 |
| MsG0380017947.01 | MsG0480022913.01 | 0.832083 | 1.157299e-55 | 1.280010e-52 |
| MsG0380017947.01 | MsG0480022960.01 | 0.840825 | 6.886366e-58 | 9.928005e-55 |
| MsG0380017947.01 | MsG0480023221.01 | 0.897534 | 1.280988e-76 | 1.453550e-72 |
| MsG0380017947.01 | MsG0480023387.01 | 0.810782 | 9.714402e-51 | 5.909831e-48 |
| MsG0380017947.01 | MsG0480023463.01 | 0.834311 | 3.225693e-56 | 3.813639e-53 |
| MsG0380017947.01 | MsG0480023636.01 | 0.814908 | 1.212499e-51 | 8.239021e-49 |
| MsG0380017947.01 | MsG0480023660.01 | 0.814609 | 1.411944e-51 | 9.517919e-49 |
| MsG0380017947.01 | MsG0480023771.01 | 0.815338 | 9.728219e-52 | 6.688901e-49 |
| MsG0380017947.01 | MsG0580024084.01 | 0.831898 | 1.285828e-55 | 1.414667e-52 |
| MsG0380017947.01 | MsG0580024197.01 | 0.814487 | 1.502628e-51 | 1.009617e-48 |
| MsG0380017947.01 | MsG0580024468.01 | 0.807011 | 6.225416e-50 | 3.429133e-47 |
| MsG0380017947.01 | MsG0580024698.01 | 0.825430 | 4.706813e-54 | 4.289023e-51 |
| MsG0380017947.01 | MsG0580024727.01 | 0.833690 | 4.613936e-56 | 5.353409e-53 |
| MsG0380017947.01 | MsG0580025268.01 | 0.858682 | 6.968777e-63 | 1.793188e-59 |
| MsG0380017947.01 | MsG0580025661.01 | 0.801896 | 7.251500e-49 | 3.503593e-46 |
| MsG0380017947.01 | MsG0580025756.01 | 0.801219 | 9.984916e-49 | 4.742112e-46 |
| MsG0380017947.01 | MsG0580025772.01 | 0.821024 | 5.031080e-53 | 4.046594e-50 |
| MsG0380017947.01 | MsG0580026137.01 | 0.819620 | 1.055762e-52 | 8.165297e-50 |
| MsG0380017947.01 | MsG0580026485.01 | 0.849917 | 2.375991e-60 | 4.575844e-57 |
| MsG0380017947.01 | MsG0580027031.01 | 0.808675 | 2.756937e-50 | 1.586065e-47 |
| MsG0380017947.01 | MsG0580027361.01 | 0.845011 | 5.297313e-59 | 8.708243e-56 |
| MsG0380017947.01 | MsG0580028044.01 | 0.812630 | 3.849319e-51 | 2.459876e-48 |
| MsG0380017947.01 | MsG0580028582.01 | 0.814138 | 1.794406e-51 | 1.194307e-48 |
| MsG0380017947.01 | MsG0580028630.01 | 0.809134 | 2.198390e-50 | 1.280360e-47 |
| MsG0380017947.01 | MsG0580028914.01 | 0.805804 | 1.118432e-49 | 5.973096e-47 |
| MsG0380017947.01 | MsG0580029879.01 | 0.813019 | 3.164170e-51 | 2.042885e-48 |
| MsG0380017947.01 | MsG0580030010.01 | 0.831019 | 2.116405e-55 | 2.268284e-52 |
| MsG0380017947.01 | MsG0580030142.01 | 0.811828 | 5.758161e-51 | 3.601198e-48 |
| MsG0380017947.01 | MsG0680030350.01 | 0.841745 | 3.942779e-58 | 5.848566e-55 |
| MsG0380017947.01 | MsG0680031361.01 | 0.807406 | 5.133305e-50 | 2.856866e-47 |
| MsG0380017947.01 | MsG0680031488.01 | 0.880996 | 3.461670e-70 | 1.993476e-66 |
| MsG0380017947.01 | MsG0680031628.01 | 0.815679 | 8.168985e-52 | 5.669713e-49 |
| MsG0380017947.01 | MsG0680031650.01 | 0.821585 | 3.734144e-53 | 3.050287e-50 |
| MsG0380017947.01 | MsG0680031939.01 | 0.814885 | 1.226447e-51 | 8.328805e-49 |
| MsG0380017947.01 | MsG0680032809.01 | 0.877912 | 4.293487e-69 | 2.197799e-65 |
| MsG0380017947.01 | MsG0680034320.01 | 0.808801 | 2.590654e-50 | 1.495340e-47 |
| MsG0380017947.01 | MsG0680034602.01 | 0.817496 | 3.200074e-52 | 2.334221e-49 |
| MsG0380017947.01 | MsG0680035577.01 | 0.828755 | 7.534717e-55 | 7.557981e-52 |
| MsG0380017947.01 | MsG0680035876.01 | 0.838938 | 2.135557e-57 | 2.904179e-54 |
| MsG0380017947.01 | MsG0680035877.01 | 0.880106 | 7.212124e-70 | 4.012965e-66 |
| MsG0380017947.01 | MsG0680035888.01 | 0.855746 | 5.131181e-62 | 1.196818e-58 |
| MsG0380017947.01 | MsG0780036183.01 | 0.811530 | 6.686613e-51 | 4.149193e-48 |
| MsG0380017947.01 | MsG0780036288.01 | 0.844336 | 8.051898e-59 | 1.295727e-55 |
| MsG0380017947.01 | MsG0780036340.01 | 0.802110 | 6.552700e-49 | 3.183079e-46 |
| MsG0380017947.01 | MsG0780036659.01 | 0.807509 | 4.883098e-50 | 2.724918e-47 |
| MsG0380017947.01 | MsG0780037093.01 | 0.853880 | 1.783250e-61 | 3.910476e-58 |
| MsG0380017947.01 | MsG0780038400.01 | 0.824971 | 6.045128e-54 | 5.437512e-51 |
| MsG0380017947.01 | MsG0780038603.01 | 0.810199 | 1.298233e-50 | 7.776177e-48 |
| MsG0380017947.01 | MsG0780039170.01 | 0.800030 | 1.745021e-48 | 8.041396e-46 |
| MsG0380017947.01 | MsG0780039369.01 | 0.805155 | 1.530437e-49 | 8.038225e-47 |
| MsG0380017947.01 | MsG0780039443.01 | 0.801243 | 9.870152e-49 | 4.690668e-46 |
| MsG0380017947.01 | MsG0780039848.01 | 0.804727 | 1.879720e-49 | 9.765195e-47 |
| MsG0380017947.01 | MsG0780040529.01 | 0.825462 | 4.626703e-54 | 4.219756e-51 |
| MsG0380017947.01 | MsG0780040734.01 | 0.813680 | 2.264335e-51 | 1.488457e-48 |
| MsG0380017947.01 | MsG0780040926.01 | 0.809139 | 2.193261e-50 | 1.277522e-47 |
| MsG0380017947.01 | MsG0780041016.01 | 0.833018 | 6.786325e-56 | 7.718070e-53 |
| MsG0380017947.01 | MsG0780041048.01 | 0.801544 | 8.566306e-49 | 4.101824e-46 |
| MsG0380017947.01 | MsG0780041137.01 | 0.814826 | 1.264247e-51 | 8.572033e-49 |
| MsG0380017947.01 | MsG0780041223.01 | 0.839214 | 1.811550e-57 | 2.484609e-54 |
| MsG0380017947.01 | MsG0780041268.01 | 0.846524 | 2.057939e-59 | 3.552188e-56 |
| MsG0380017947.01 | MsG0780041391.01 | 0.865402 | 6.062095e-65 | 1.969707e-61 |
| MsG0380017947.01 | MsG0780041416.01 | 0.824158 | 9.390290e-54 | 8.251570e-51 |
| MsG0380017947.01 | MsG0780041435.01 | 0.855610 | 5.622391e-62 | 1.305411e-58 |
| MsG0380017947.01 | MsG0780041440.01 | 0.805047 | 1.612205e-49 | 8.444114e-47 |
| MsG0380017947.01 | MsG0780041584.01 | 0.808134 | 3.595447e-50 | 2.039410e-47 |
| MsG0380017947.01 | MsG0780041692.01 | 0.802603 | 5.188586e-49 | 2.552278e-46 |
| MsG0380017947.01 | MsG0880041851.01 | 0.810466 | 1.136953e-50 | 6.858380e-48 |
| MsG0380017947.01 | MsG0880042033.01 | 0.853616 | 2.124432e-61 | 4.617822e-58 |
| MsG0380017947.01 | MsG0880042128.01 | 0.837690 | 4.479226e-57 | 5.864478e-54 |
| MsG0380017947.01 | MsG0880042129.01 | 0.819058 | 1.417136e-52 | 1.079136e-49 |
| MsG0380017947.01 | MsG0880042519.01 | 0.833710 | 4.560754e-56 | 5.294840e-53 |
| MsG0380017947.01 | MsG0880042700.01 | 0.807632 | 4.598443e-50 | 2.574165e-47 |
| MsG0380017947.01 | MsG0880042795.01 | 0.815659 | 8.256416e-52 | 5.727132e-49 |
| MsG0380017947.01 | MsG0880042978.01 | 0.808750 | 2.656303e-50 | 1.531207e-47 |
| MsG0380017947.01 | MsG0880042991.01 | 0.847326 | 1.241472e-59 | 2.198467e-56 |
| MsG0380017947.01 | MsG0880043477.01 | 0.802656 | 5.059250e-49 | 2.491970e-46 |
| MsG0380017947.01 | MsG0880043944.01 | 0.803632 | 3.177905e-49 | 1.604942e-46 |
| MsG0380017947.01 | MsG0880044131.01 | 0.800852 | 1.186302e-48 | 5.582360e-46 |
| MsG0380017947.01 | MsG0880044248.01 | 0.817230 | 3.672677e-52 | 2.659350e-49 |
| MsG0380017947.01 | MsG0880044394.01 | 0.805124 | 1.552978e-49 | 8.150240e-47 |
| MsG0380017947.01 | MsG0880044728.01 | 0.832988 | 6.901276e-56 | 7.841995e-53 |
| MsG0380017947.01 | MsG0880044975.01 | 0.822453 | 2.350112e-53 | 1.967945e-50 |
| MsG0380017947.01 | MsG0880045124.01 | 0.819718 | 1.002665e-52 | 7.776416e-50 |
| MsG0380017947.01 | MsG0880045294.01 | 0.830146 | 3.460885e-55 | 3.615862e-52 |
| MsG0380017947.01 | MsG0880045362.01 | 0.813141 | 2.973681e-51 | 1.926203e-48 |
| MsG0380017947.01 | MsG0880045453.01 | 0.804498 | 2.099139e-49 | 1.083941e-46 |
| MsG0380017947.01 | MsG0880045965.01 | 0.806921 | 6.502546e-50 | 3.573489e-47 |
| MsG0380017947.01 | MsG0880046122.01 | 0.807728 | 4.387562e-50 | 2.462293e-47 |
| MsG0380017947.01 | MsG0880046284.01 | 0.817894 | 2.602199e-52 | 1.918876e-49 |
| MsG0380017947.01 | MsG0880046598.01 | 0.815385 | 9.498837e-52 | 6.539477e-49 |
| MsG0380017947.01 | MsG0880046620.01 | 0.816138 | 6.452628e-52 | 4.535014e-49 |
| MsG0380017947.01 | MsG0880047212.01 | 0.830335 | 3.111944e-55 | 3.269014e-52 |
| MsG0380017947.01 | MsG0880047574.01 | 0.844373 | 7.871943e-59 | 1.268173e-55 |
| MsG0380017947.01 | MsG0880047743.01 | 0.840347 | 9.182283e-58 | 1.304205e-54 |
| MsG0280006461.01 | MsG0380017947.01 | 0.819316 | 1.238328e-52 | 9.495961e-50 |
| MsG0280006483.01 | MsG0380017947.01 | 0.823551 | 1.303088e-53 | 1.125554e-50 |
| MsG0280006593.01 | MsG0380017947.01 | 0.844950 | 5.504468e-59 | 9.031183e-56 |
| MsG0280006993.01 | MsG0380017947.01 | 0.855930 | 4.533675e-62 | 1.063988e-58 |
| MsG0280007153.01 | MsG0380017947.01 | 0.808752 | 2.654126e-50 | 1.530039e-47 |
| MsG0280007203.01 | MsG0380017947.01 | 0.812488 | 4.133618e-51 | 2.631830e-48 |
| MsG0280007307.01 | MsG0380017947.01 | 0.825171 | 5.421288e-54 | 4.904317e-51 |
| MsG0280007527.01 | MsG0380017947.01 | 0.827722 | 1.337482e-54 | 1.301909e-51 |
| MsG0280007787.01 | MsG0380017947.01 | 0.875246 | 3.584934e-68 | 1.662394e-64 |
| MsG0280007847.01 | MsG0380017947.01 | 0.850609 | 1.520268e-60 | 2.994469e-57 |
| MsG0280007903.01 | MsG0380017947.01 | 0.814205 | 1.734618e-51 | 1.156533e-48 |
| MsG0280007955.01 | MsG0380017947.01 | 0.807281 | 5.456839e-50 | 3.027084e-47 |
| MsG0280008429.01 | MsG0380017947.01 | 0.841576 | 4.371307e-58 | 6.450686e-55 |
| MsG0280009146.01 | MsG0380017947.01 | 0.808364 | 3.212421e-50 | 1.833308e-47 |
| MsG0280009353.01 | MsG0380017947.01 | 0.838403 | 2.936346e-57 | 3.928717e-54 |
| MsG0280009575.01 | MsG0380017947.01 | 0.844203 | 8.744947e-59 | 1.401508e-55 |
| MsG0280010013.01 | MsG0380017947.01 | 0.828246 | 9.999488e-55 | 9.883509e-52 |
| MsG0280010082.01 | MsG0380017947.01 | 0.817360 | 3.433937e-52 | 2.495387e-49 |
| MsG0280010182.01 | MsG0380017947.01 | 0.804430 | 2.168658e-49 | 1.117891e-46 |
| MsG0280010184.01 | MsG0380017947.01 | 0.812927 | 3.313216e-51 | 2.133840e-48 |
| MsG0280010489.01 | MsG0380017947.01 | 0.817808 | 2.720961e-52 | 2.001827e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017947.01.T01 | MTR_3g115650 | 91.971 | 137 | 10 | 1 | 1 | 136 | 1 | 137 | 1.99e-79 | 234 |
| MsG0380017947.01.T01 | MTR_3g115650 | 92.188 | 128 | 9 | 1 | 1 | 127 | 1 | 128 | 3.33e-72 | 215 |
| MsG0380017947.01.T01 | MTR_3g115650 | 76.623 | 154 | 9 | 2 | 1 | 127 | 1 | 154 | 6.10e-66 | 200 |
| MsG0380017947.01.T01 | MTR_3g115650 | 89.706 | 68 | 7 | 0 | 60 | 127 | 1 | 68 | 1.38e-37 | 125 |
| MsG0380017947.01.T01 | MTR_3g115650 | 64.894 | 94 | 7 | 1 | 60 | 127 | 1 | 94 | 2.00e-31 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017947.01.T01 | AT1G20770 | 57.143 | 84 | 31 | 2 | 22 | 101 | 30 | 112 | 1.63e-28 | 104 |
| MsG0380017947.01.T01 | AT1G20770 | 57.143 | 84 | 31 | 2 | 22 | 101 | 30 | 112 | 8.40e-28 | 101 |
Find 58 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTCGCTTTGCAATTTA+TGG | 0.047989 | 3:-102546098 | MsG0380017947.01.T01:CDS |
| GCGCGTTAATAGTTCTTTAT+TGG | 0.183809 | 3:-102545712 | MsG0380017947.01.T01:CDS |
| TGTAATTTCAACTTTATATC+AGG | 0.194592 | 3:-102545241 | MsG0380017947.01.T01:three_prime_UTR |
| TCTTCTAATTTAGTACTTTC+AGG | 0.205802 | 3:+102545429 | None:intergenic |
| GACCGAGCATTTCAAGATTT+TGG | 0.209014 | 3:-102543281 | MsG0380017947.01.T01:three_prime_UTR |
| GTCAATGGGGAAAACATATT+TGG | 0.253918 | 3:+102545340 | None:intergenic |
| ATTGCTGCTTCTTCATTCTT+TGG | 0.263150 | 3:+102544422 | None:intergenic |
| AGCTAGTGCTAGATATTCTA+TGG | 0.274041 | 3:-102545742 | MsG0380017947.01.T01:CDS |
| TCCCATTAAGTTCTCTGTTA+TGG | 0.290245 | 3:+102545095 | None:intergenic |
| CACACTTCACGTTGCAGAAA+TGG | 0.314124 | 3:-102545470 | MsG0380017947.01.T01:CDS |
| GTTGGGTCGCACGAAGCTTT+GGG | 0.323316 | 3:+102544657 | None:intergenic |
| AACCATAACAGAGAACTTAA+TGG | 0.348503 | 3:-102545097 | MsG0380017947.01.T01:three_prime_UTR |
| AGTTGGGTCGCACGAAGCTT+TGG | 0.351397 | 3:+102544656 | None:intergenic |
| GAGAAGAGAGGTTTGTTTGA+AGG | 0.357896 | 3:-102546152 | MsG0380017947.01.T01:CDS |
| TTGCATTATGTTCAGAAGAT+AGG | 0.359977 | 3:+102545289 | None:intergenic |
| CTCCATTTGTGATGCCGCTC+TGG | 0.374189 | 3:+102543313 | None:intergenic |
| AGAAGAGAGGTTTGTTTGAA+GGG | 0.396297 | 3:-102546151 | MsG0380017947.01.T01:CDS |
| GAAGAAGCAGCAATTCCTTC+AGG | 0.415336 | 3:-102544413 | MsG0380017947.01.T01:intron |
| CTTCCATCTCTTGATGAAGT+TGG | 0.430151 | 3:+102544448 | None:intergenic |
| ACCATAACAGAGAACTTAAT+GGG | 0.438316 | 3:-102545096 | MsG0380017947.01.T01:three_prime_UTR |
| TATCGATGCCAACAGTCAAT+GGG | 0.448328 | 3:+102545326 | None:intergenic |
| AAGACCAAATGAAAATTTCT+CGG | 0.452691 | 3:-102543239 | MsG0380017947.01.T01:three_prime_UTR |
| ACACTTCACGTTGCAGAAAT+GGG | 0.458799 | 3:-102545469 | MsG0380017947.01.T01:CDS |
| AGTAATAGTATGAAATCATC+TGG | 0.464799 | 3:-102545384 | MsG0380017947.01.T01:CDS |
| ATATTCATCACAGGGATGGC+TGG | 0.466276 | 3:-102545769 | MsG0380017947.01.T01:intron |
| CTATCGATGCCAACAGTCAA+TGG | 0.466487 | 3:+102545325 | None:intergenic |
| TGCCAGAGCGGCATCACAAA+TGG | 0.476797 | 3:-102543315 | MsG0380017947.01.T01:three_prime_UTR |
| GTTGGCATCGATAGTGTAAA+GGG | 0.481060 | 3:-102545316 | MsG0380017947.01.T01:three_prime_UTR |
| ACCTTTCTCAAATGACAGTT+GGG | 0.486844 | 3:+102544640 | None:intergenic |
| CACCTTTCTCAAATGACAGT+TGG | 0.489015 | 3:+102544639 | None:intergenic |
| TTCATACTATTACTATCTTG+TGG | 0.506427 | 3:+102545393 | None:intergenic |
| CGCCAAAATCTTGAAATGCT+CGG | 0.510408 | 3:+102543279 | None:intergenic |
| GTAATTTCAACTTTATATCA+GGG | 0.514931 | 3:-102545240 | MsG0380017947.01.T01:three_prime_UTR |
| TAGCAGCTGAATGGAATTTG+AGG | 0.516503 | 3:+102545688 | None:intergenic |
| TAATATCAAGTGAAACAAGT+TGG | 0.518974 | 3:-102543143 | MsG0380017947.01.T01:three_prime_UTR |
| TGGAGGAGAGAGAATCGGAA+AGG | 0.522502 | 3:+102546053 | None:intergenic |
| TCAATGTTGTAGCAGCTGAA+TGG | 0.524811 | 3:+102545679 | None:intergenic |
| TCTCTCCTCCACACTTCGAC+AGG | 0.526939 | 3:-102546041 | MsG0380017947.01.T01:intron |
| GGAGGAGAGAGAATCGGAAA+GGG | 0.529857 | 3:+102546054 | None:intergenic |
| TGTTGGCATCGATAGTGTAA+AGG | 0.538891 | 3:-102545317 | MsG0380017947.01.T01:three_prime_UTR |
| ATACTACTAAAAGCATATAG+TGG | 0.541890 | 3:+102545167 | None:intergenic |
| AAGTGTGGAGGAGAGAGAAT+CGG | 0.545779 | 3:+102546048 | None:intergenic |
| ATAGTGGCAAAATCATATTA+CGG | 0.550281 | 3:+102545183 | None:intergenic |
| TTGGGTCGCACGAAGCTTTG+GGG | 0.558578 | 3:+102544658 | None:intergenic |
| ATCCCGAAAATCATAGCGAA+TGG | 0.565553 | 3:-102546182 | MsG0380017947.01.T01:exon |
| ACTTTCAGGTTCGTGTTCAG+AGG | 0.572436 | 3:+102545443 | None:intergenic |
| ACCCAACTGTCATTTGAGAA+AGG | 0.572755 | 3:-102544641 | MsG0380017947.01.T01:intron |
| TAACCAACTTCATCAAGAGA+TGG | 0.583134 | 3:-102544451 | MsG0380017947.01.T01:three_prime_UTR |
| AATGGAAGAAGAGAGAAGAG+AGG | 0.593875 | 3:-102546164 | MsG0380017947.01.T01:CDS |
| AAGATATCCGAAAATCAAGA+TGG | 0.595526 | 3:-102545657 | MsG0380017947.01.T01:intron |
| GCTAGTGCTAGATATTCTAT+GGG | 0.628225 | 3:-102545741 | MsG0380017947.01.T01:CDS |
| CATTTCTGCAACGTGAAGTG+TGG | 0.652174 | 3:+102545471 | None:intergenic |
| TGTATGTACCTGTCGAAGTG+TGG | 0.657763 | 3:+102546033 | None:intergenic |
| TCTTTATCAGGCTGCCAGAG+CGG | 0.665155 | 3:-102543327 | MsG0380017947.01.T01:intron |
| TTGGCATCGATAGTGTAAAG+GGG | 0.674407 | 3:-102545315 | MsG0380017947.01.T01:three_prime_UTR |
| ATCGATGCCAACAGTCAATG+GGG | 0.684513 | 3:+102545327 | None:intergenic |
| TGGCATCGATAGTGTAAAGG+GGG | 0.687443 | 3:-102545314 | MsG0380017947.01.T01:three_prime_UTR |
| ATGTACCTGTCGAAGTGTGG+AGG | 0.713176 | 3:+102546036 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAATCTATAATAAAC+GGG | + | Chr3:102544341-102544360 | None:intergenic | 10.0% |
| !!! | AATAATTTTTTATCTTTATC+AGG | - | Chr3:102545988-102546007 | MsG0380017947.01.T01:intron | 10.0% |
| !!! | ACATTTACAATATTTTTTTA+CGG | - | Chr3:102545668-102545687 | MsG0380017947.01.T01:CDS | 10.0% |
| !!! | GTTTATTATAGATTTTTTAA+AGG | - | Chr3:102544341-102544360 | MsG0380017947.01.T01:intron | 10.0% |
| !! | CCATTAAAAAAAAAATACAT+AGG | + | Chr3:102545434-102545453 | None:intergenic | 15.0% |
| !! | GATTTAAAAGATAAGTTATT+GGG | - | Chr3:102545911-102545930 | MsG0380017947.01.T01:intron | 15.0% |
| !! | TGATTTAAAAGATAAGTTAT+TGG | - | Chr3:102545910-102545929 | MsG0380017947.01.T01:intron | 15.0% |
| !!! | AAAATATTGTAAATGTGTTT+TGG | + | Chr3:102545664-102545683 | None:intergenic | 15.0% |
| !!! | AAACATAATTAGTTTTACAT+AGG | - | Chr3:102545179-102545198 | MsG0380017947.01.T01:three_prime_UTR | 15.0% |
| !!! | AATTTTGTCTTTTATAGTTA+AGG | - | Chr3:102543695-102543714 | MsG0380017947.01.T01:intron | 15.0% |
| !!! | AGATTCTTTTAAAAAGATAA+TGG | - | Chr3:102544314-102544333 | MsG0380017947.01.T01:intron | 15.0% |
| !!! | CATTTACAATATTTTTTTAC+GGG | - | Chr3:102545669-102545688 | MsG0380017947.01.T01:CDS | 15.0% |
| !!! | CCTATGTATTTTTTTTTTAA+TGG | - | Chr3:102545431-102545450 | MsG0380017947.01.T01:CDS | 15.0% |
| !! | AAAAAAAAAATACATAGGCT+TGG | + | Chr3:102545429-102545448 | None:intergenic | 20.0% |
| !! | AAAAAAAAATACATAGGCTT+GGG | + | Chr3:102545428-102545447 | None:intergenic | 20.0% |
| !! | AAAGGATGAAATACTTAAAA+TGG | + | Chr3:102544409-102544428 | None:intergenic | 20.0% |
| !! | AATAACTTTATACAACACTT+TGG | + | Chr3:102545286-102545305 | None:intergenic | 20.0% |
| !! | GTAATTTCAACTTTATATCA+GGG | - | Chr3:102544087-102544106 | MsG0380017947.01.T01:intron | 20.0% |
| !! | TAAAAAAAAGTTGTACCAAA+AGG | + | Chr3:102544427-102544446 | None:intergenic | 20.0% |
| !! | TATAAAGTTATTCTCCAAAA+TGG | - | Chr3:102545294-102545313 | MsG0380017947.01.T01:three_prime_UTR | 20.0% |
| !! | TGTAATTTCAACTTTATATC+AGG | - | Chr3:102544086-102544105 | MsG0380017947.01.T01:intron | 20.0% |
| !! | TTCTATGTTAAGTTACAAAA+AGG | + | Chr3:102543783-102543802 | None:intergenic | 20.0% |
| !! | TTGAATAAATTCCTGTAATT+GGG | - | Chr3:102545826-102545845 | MsG0380017947.01.T01:intron | 20.0% |
| !! | TTGAATTACTGTTAAAATCT+TGG | - | Chr3:102544585-102544604 | MsG0380017947.01.T01:intron | 20.0% |
| !!! | AAATTTACCATCTTGATTTT+CGG | + | Chr3:102543680-102543699 | None:intergenic | 20.0% |
| !!! | ATGTTTGATTTTAAGCAAAA+AGG | + | Chr3:102545165-102545184 | None:intergenic | 20.0% |
| !!! | TTGTTTCTAATTTTCTTACT+TGG | - | Chr3:102544188-102544207 | MsG0380017947.01.T01:intron | 20.0% |
| !!! | TTTTAAGTATTTCATCCTTT+TGG | - | Chr3:102544409-102544428 | MsG0380017947.01.T01:intron | 20.0% |
| ! | AAACATTCACTTAGCATTTA+GGG | + | Chr3:102545562-102545581 | None:intergenic | 25.0% |
| ! | AAATGATGAGTAATGTTATG+AGG | - | Chr3:102545388-102545407 | MsG0380017947.01.T01:CDS | 25.0% |
| ! | AAGACCAAATGAAAATTTCT+CGG | - | Chr3:102546088-102546107 | MsG0380017947.01.T01:CDS | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | Chr3:102543459-102543478 | MsG0380017947.01.T01:intron | 25.0% |
| ! | AATGATGAGTAATGTTATGA+GGG | - | Chr3:102545389-102545408 | MsG0380017947.01.T01:CDS | 25.0% |
| ! | AATTACTGTTAAAATCTTGG+TGG | - | Chr3:102544588-102544607 | MsG0380017947.01.T01:intron | 25.0% |
| ! | ACACAAAGTAAGGAAATTTA+AGG | + | Chr3:102544731-102544750 | None:intergenic | 25.0% |
| ! | AGGGTGAATAAATTATAGAT+TGG | - | Chr3:102544524-102544543 | MsG0380017947.01.T01:intron | 25.0% |
| ! | AGTAATAGTATGAAATCATC+TGG | - | Chr3:102543943-102543962 | MsG0380017947.01.T01:intron | 25.0% |
| ! | ATAAGTTCATATCAAGACTA+TGG | - | Chr3:102544975-102544994 | MsG0380017947.01.T01:intron | 25.0% |
| ! | ATAGTGGCAAAATCATATTA+CGG | + | Chr3:102544147-102544166 | None:intergenic | 25.0% |
| ! | CAATTACAGGAATTTATTCA+AGG | + | Chr3:102545827-102545846 | None:intergenic | 25.0% |
| ! | CTTGAATAAATTCCTGTAAT+TGG | - | Chr3:102545825-102545844 | MsG0380017947.01.T01:intron | 25.0% |
| ! | GAATTTGATTAGGTTATGTA+TGG | + | Chr3:102543325-102543344 | None:intergenic | 25.0% |
| ! | GAGTTGAATTGAATTTGATT+AGG | + | Chr3:102543335-102543354 | None:intergenic | 25.0% |
| ! | GGGTGAATAAATTATAGATT+GGG | - | Chr3:102544525-102544544 | MsG0380017947.01.T01:intron | 25.0% |
| ! | TAAACATTCACTTAGCATTT+AGG | + | Chr3:102545563-102545582 | None:intergenic | 25.0% |
| ! | TAATATCAAGTGAAACAAGT+TGG | - | Chr3:102546184-102546203 | MsG0380017947.01.T01:exon | 25.0% |
| ! | TCTTCTAATTTAGTACTTTC+AGG | + | Chr3:102543901-102543920 | None:intergenic | 25.0% |
| ! | TGGTTCATATATTAAAACAG+AGG | + | Chr3:102543810-102543829 | None:intergenic | 25.0% |
| ! | TGTGATGAATATCTTAAAGA+AGG | + | Chr3:102543550-102543569 | None:intergenic | 25.0% |
| ! | TTACGGGATAACATTTATAA+GGG | - | Chr3:102545685-102545704 | MsG0380017947.01.T01:CDS | 25.0% |
| ! | TTCATACTATTACTATCTTG+TGG | + | Chr3:102543937-102543956 | None:intergenic | 25.0% |
| ! | TTTACGGGATAACATTTATA+AGG | - | Chr3:102545684-102545703 | MsG0380017947.01.T01:CDS | 25.0% |
| !! | ATACTACTAAAAGCATATAG+TGG | + | Chr3:102544163-102544182 | None:intergenic | 25.0% |
| !! | ATATGCTTTTAGTAGTATGT+CGG | - | Chr3:102544165-102544184 | MsG0380017947.01.T01:intron | 25.0% |
| !!! | ATTAGTTTTACATAGGAACT+AGG | - | Chr3:102545186-102545205 | MsG0380017947.01.T01:three_prime_UTR | 25.0% |
| !!! | TCTTTAAGATATTCATCACA+GGG | - | Chr3:102543550-102543569 | MsG0380017947.01.T01:intron | 25.0% |
| !!! | TTCTTTAAGATATTCATCAC+AGG | - | Chr3:102543549-102543568 | MsG0380017947.01.T01:intron | 25.0% |
| AAACACCTTATGTTATACGA+TGG | + | Chr3:102545216-102545235 | None:intergenic | 30.0% | |
| AACAATTTCAGATGATGCAA+TGG | - | Chr3:102543503-102543522 | MsG0380017947.01.T01:intron | 30.0% | |
| AACATTCACTTAGCATTTAG+GGG | + | Chr3:102545561-102545580 | None:intergenic | 30.0% | |
| AACCATAACAGAGAACTTAA+TGG | - | Chr3:102544230-102544249 | MsG0380017947.01.T01:intron | 30.0% | |
| AAGATATCCGAAAATCAAGA+TGG | - | Chr3:102543670-102543689 | MsG0380017947.01.T01:intron | 30.0% | |
| ACCATAACAGAGAACTTAAT+GGG | - | Chr3:102544231-102544250 | MsG0380017947.01.T01:intron | 30.0% | |
| AGGTCTCCATATTAAAGAAA+AGG | + | Chr3:102545145-102545164 | None:intergenic | 30.0% | |
| AGGTTATCAAATCAACAATC+AGG | + | Chr3:102543530-102543549 | None:intergenic | 30.0% | |
| ATTTCCTTACTTTGTGTATG+CGG | - | Chr3:102544734-102544753 | MsG0380017947.01.T01:intron | 30.0% | |
| CCAAAATAAGAGTAGAAATG+AGG | + | Chr3:102544949-102544968 | None:intergenic | 30.0% | |
| GGTCTCCATATTAAAGAAAA+GGG | + | Chr3:102545144-102545163 | None:intergenic | 30.0% | |
| TTCTAATATCTTTGCTCTCA+TGG | - | Chr3:102544495-102544514 | MsG0380017947.01.T01:three_prime_UTR | 30.0% | |
| TTGCATTATGTTCAGAAGAT+AGG | + | Chr3:102544041-102544060 | None:intergenic | 30.0% | |
| TTGTAAAATGAGAAGCGAAT+GGG | + | Chr3:102545740-102545759 | None:intergenic | 30.0% | |
| TTTATACAACACTTTGGTTG+AGG | + | Chr3:102545280-102545299 | None:intergenic | 30.0% | |
| ! | AACACCGAGAAATTTTCATT+TGG | + | Chr3:102546095-102546114 | None:intergenic | 30.0% |
| ! | AGTGTAGATACTAACCATTT+TGG | + | Chr3:102545311-102545330 | None:intergenic | 30.0% |
| ! | GATGTCACAAATTGATGATA+AGG | - | Chr3:102545600-102545619 | MsG0380017947.01.T01:intron | 30.0% |
| ! | TCAGTCCCTTTTCTTTAATA+TGG | - | Chr3:102545136-102545155 | MsG0380017947.01.T01:three_prime_UTR | 30.0% |
| ! | TTGGAGATACTTTCTCTTTT+TGG | - | Chr3:102546203-102546222 | MsG0380017947.01.T01:five_prime_UTR | 30.0% |
| !! | AAAATCTTGGTGGTTTTCAT+AGG | - | Chr3:102544598-102544617 | MsG0380017947.01.T01:intron | 30.0% |
| !! | CCTCATTTCTACTCTTATTT+TGG | - | Chr3:102544946-102544965 | MsG0380017947.01.T01:intron | 30.0% |
| !!! | TGAGTATTTGTTTTAGACGT+TGG | - | Chr3:102545964-102545983 | MsG0380017947.01.T01:intron | 30.0% |
| AAAACCGCATACACAAAGTA+AGG | + | Chr3:102544741-102544760 | None:intergenic | 35.0% | |
| ACATTCACTTAGCATTTAGG+GGG | + | Chr3:102545560-102545579 | None:intergenic | 35.0% | |
| ACCTTTCTCAAATGACAGTT+GGG | + | Chr3:102544690-102544709 | None:intergenic | 35.0% | |
| AGCTAGTGCTAGATATTCTA+TGG | - | Chr3:102543585-102543604 | MsG0380017947.01.T01:intron | 35.0% | |
| AGCTTCTCATAAAGTAGAGT+TGG | - | Chr3:102544465-102544484 | MsG0380017947.01.T01:three_prime_UTR | 35.0% | |
| AGGAAGCTTCAAATGAGAAA+TGG | - | Chr3:102544361-102544380 | MsG0380017947.01.T01:intron | 35.0% | |
| ATGAGGTTATCTATACCTGA+AGG | + | Chr3:102544932-102544951 | None:intergenic | 35.0% | |
| ATGAGTAATGTTATGAGGGA+CGG | - | Chr3:102545393-102545412 | MsG0380017947.01.T01:CDS | 35.0% | |
| ATTCAAGGTCTGTTTAGACT+GGG | + | Chr3:102545812-102545831 | None:intergenic | 35.0% | |
| ATTTCATTGCCAACATTCAG+AGG | - | Chr3:102543358-102543377 | MsG0380017947.01.T01:intron | 35.0% | |
| CAAAACTCCAAAAACTGACA+AGG | + | Chr3:102544645-102544664 | None:intergenic | 35.0% | |
| CAATAATAAACCACAGTGGA+TGG | - | Chr3:102545364-102545383 | MsG0380017947.01.T01:CDS | 35.0% | |
| CTCATAAAGTAGAGTTGGAT+TGG | - | Chr3:102544470-102544489 | MsG0380017947.01.T01:three_prime_UTR | 35.0% | |
| CTTGTAAAATGAGAAGCGAA+TGG | + | Chr3:102545741-102545760 | None:intergenic | 35.0% | |
| GAAATTTCTCCTCTGAATGT+TGG | + | Chr3:102543370-102543389 | None:intergenic | 35.0% | |
| GAATCCTACTAGTATCATCT+TGG | - | Chr3:102543730-102543749 | MsG0380017947.01.T01:intron | 35.0% | |
| GACATCCAAACATCAAACAA+GGG | + | Chr3:102545586-102545605 | None:intergenic | 35.0% | |
| GCGCGTTAATAGTTCTTTAT+TGG | - | Chr3:102543615-102543634 | MsG0380017947.01.T01:intron | 35.0% | |
| GCTAGTGCTAGATATTCTAT+GGG | - | Chr3:102543586-102543605 | MsG0380017947.01.T01:intron | 35.0% | |
| GTCAATGGGGAAAACATATT+TGG | + | Chr3:102543990-102544009 | None:intergenic | 35.0% | |
| GTGTCAATAATAAACCACAG+TGG | - | Chr3:102545360-102545379 | MsG0380017947.01.T01:CDS | 35.0% | |
| TAACCAACTTCATCAAGAGA+TGG | - | Chr3:102544876-102544895 | MsG0380017947.01.T01:intron | 35.0% | |
| TAAGATATTCATCACAGGGA+TGG | - | Chr3:102543554-102543573 | MsG0380017947.01.T01:intron | 35.0% | |
| TAGAAAAGCCATATTGTGCT+CGG | + | Chr3:102545768-102545787 | None:intergenic | 35.0% | |
| TATTCAAGGTCTGTTTAGAC+TGG | + | Chr3:102545813-102545832 | None:intergenic | 35.0% | |
| TCCCATTAAGTTCTCTGTTA+TGG | + | Chr3:102544235-102544254 | None:intergenic | 35.0% | |
| TGACATCCAAACATCAAACA+AGG | + | Chr3:102545587-102545606 | None:intergenic | 35.0% | |
| TGAGCTAAGAGAAAAGGAAT+TGG | + | Chr3:102545518-102545537 | None:intergenic | 35.0% | |
| TGTAAAATGAGAAGCGAATG+GGG | + | Chr3:102545739-102545758 | None:intergenic | 35.0% | |
| ! | AGAAGAGAGGTTTGTTTGAA+GGG | - | Chr3:102543176-102543195 | MsG0380017947.01.T01:three_prime_UTR | 35.0% |
| ! | ATTGCTGCTTCTTCATTCTT+TGG | + | Chr3:102544908-102544927 | None:intergenic | 35.0% |
| ! | CAAAGTCGCTTTGCAATTTA+TGG | - | Chr3:102543229-102543248 | MsG0380017947.01.T01:three_prime_UTR | 35.0% |
| ! | CTGATTTGAGCTAAGAGAAA+AGG | + | Chr3:102545524-102545543 | None:intergenic | 35.0% |
| ! | CTTCCATTCGCTATGATTTT+CGG | + | Chr3:102543151-102543170 | None:intergenic | 35.0% |
| ! | GCAAGGAAAGATCAAAGTTT+TGG | + | Chr3:102545852-102545871 | None:intergenic | 35.0% |
| ! | GTGGTTTTCATAGGTTCAAA+AGG | - | Chr3:102544607-102544626 | MsG0380017947.01.T01:intron | 35.0% |
| ! | GTTTACCCTTGTTTGATGTT+TGG | - | Chr3:102545578-102545597 | MsG0380017947.01.T01:intron | 35.0% |
| ! | TTCCATTCGCTATGATTTTC+GGG | + | Chr3:102543150-102543169 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGCTATTC+TGG | - | Chr3:102543424-102543443 | MsG0380017947.01.T01:intron | 35.0% |
| !!! | ACTTTTTTAACTCCTTCCTC+TGG | - | Chr3:102545475-102545494 | MsG0380017947.01.T01:CDS | 35.0% |
| !!! | CTTTTTTAACTCCTTCCTCT+GGG | - | Chr3:102545476-102545495 | MsG0380017947.01.T01:CDS | 35.0% |
| AAGCTATTCTGGTGAGCTTA+TGG | - | Chr3:102543435-102543454 | MsG0380017947.01.T01:intron | 40.0% | |
| AATGGAAGAAGAGAGAAGAG+AGG | - | Chr3:102543163-102543182 | MsG0380017947.01.T01:three_prime_UTR | 40.0% | |
| ACACTTCACGTTGCAGAAAT+GGG | - | Chr3:102543858-102543877 | MsG0380017947.01.T01:intron | 40.0% | |
| ACCATTGCACTCGATTCAAT+AGG | - | Chr3:102543826-102543845 | MsG0380017947.01.T01:intron | 40.0% | |
| ACCTATTGAATCGAGTGCAA+TGG | + | Chr3:102543830-102543849 | None:intergenic | 40.0% | |
| AGAAAAGCCATATTGTGCTC+GGG | + | Chr3:102545767-102545786 | None:intergenic | 40.0% | |
| ATCCCGAAAATCATAGCGAA+TGG | - | Chr3:102543145-102543164 | MsG0380017947.01.T01:three_prime_UTR | 40.0% | |
| CACCTTTCTCAAATGACAGT+TGG | + | Chr3:102544691-102544710 | None:intergenic | 40.0% | |
| CATGCCAAGATGATACTAGT+AGG | + | Chr3:102543737-102543756 | None:intergenic | 40.0% | |
| CGCCAAAATCTTGAAATGCT+CGG | + | Chr3:102546051-102546070 | None:intergenic | 40.0% | |
| CTTCCATCTCTTGATGAAGT+TGG | + | Chr3:102544882-102544901 | None:intergenic | 40.0% | |
| GCATGCCATCGTATAACATA+AGG | - | Chr3:102545208-102545227 | MsG0380017947.01.T01:three_prime_UTR | 40.0% | |
| GCTAAGAGAAAAGGAATTGG+AGG | + | Chr3:102545515-102545534 | None:intergenic | 40.0% | |
| GCTGAAAACAACTTATGGTG+AGG | - | Chr3:102543464-102543483 | MsG0380017947.01.T01:intron | 40.0% | |
| GTAAAATGAGAAGCGAATGG+GGG | + | Chr3:102545738-102545757 | None:intergenic | 40.0% | |
| TAGCAGCTGAATGGAATTTG+AGG | + | Chr3:102543642-102543661 | None:intergenic | 40.0% | |
| TATCGATGCCAACAGTCAAT+GGG | + | Chr3:102544004-102544023 | None:intergenic | 40.0% | |
| TCAATGTTGTAGCAGCTGAA+TGG | + | Chr3:102543651-102543670 | None:intergenic | 40.0% | |
| TCCAGTTTCAAACACCATGA+GGG | - | Chr3:102545332-102545351 | MsG0380017947.01.T01:exon | 40.0% | |
| TGAGTAATGTTATGAGGGAC+GGG | - | Chr3:102545394-102545413 | MsG0380017947.01.T01:CDS | 40.0% | |
| TTCAAGGTCTGTTTAGACTG+GGG | + | Chr3:102545811-102545830 | None:intergenic | 40.0% | |
| TTTGCTCTCATGGATTCACA+GGG | - | Chr3:102544505-102544524 | MsG0380017947.01.T01:three_prime_UTR | 40.0% | |
| ! | ACCCAACTGTCATTTGAGAA+AGG | - | Chr3:102544686-102544705 | MsG0380017947.01.T01:three_prime_UTR | 40.0% |
| ! | CAACTGTCATTTGAGAAAGG+TGG | - | Chr3:102544689-102544708 | MsG0380017947.01.T01:three_prime_UTR | 40.0% |
| ! | CACAAGTCCTTGTCAGTTTT+TGG | - | Chr3:102544635-102544654 | MsG0380017947.01.T01:intron | 40.0% |
| ! | GACCGAGCATTTCAAGATTT+TGG | - | Chr3:102546046-102546065 | MsG0380017947.01.T01:CDS | 40.0% |
| ! | GAGAAGAGAGGTTTGTTTGA+AGG | - | Chr3:102543175-102543194 | MsG0380017947.01.T01:three_prime_UTR | 40.0% |
| !! | ATGTTTTCCCCATTGACTGT+TGG | - | Chr3:102543993-102544012 | MsG0380017947.01.T01:intron | 40.0% |
| !! | CAAAGTTTTGGCCCAATTAC+AGG | + | Chr3:102545840-102545859 | None:intergenic | 40.0% |
| !! | GTTGGCATCGATAGTGTAAA+GGG | - | Chr3:102544011-102544030 | MsG0380017947.01.T01:intron | 40.0% |
| !! | TGTTGGCATCGATAGTGTAA+AGG | - | Chr3:102544010-102544029 | MsG0380017947.01.T01:intron | 40.0% |
| !! | TTGGCATCGATAGTGTAAAG+GGG | - | Chr3:102544012-102544031 | MsG0380017947.01.T01:intron | 40.0% |
| !!! | CTTGGTTTTGCAAACTACTG+AGG | - | Chr3:102544206-102544225 | MsG0380017947.01.T01:intron | 40.0% |
| AAGTGTGGAGGAGAGAGAAT+CGG | + | Chr3:102543282-102543301 | None:intergenic | 45.0% | |
| AGAAAAGGAATTGGAGGTCC+TGG | + | Chr3:102545509-102545528 | None:intergenic | 45.0% | |
| ATATTCATCACAGGGATGGC+TGG | - | Chr3:102543558-102543577 | MsG0380017947.01.T01:intron | 45.0% | |
| ATCGATGCCAACAGTCAATG+GGG | + | Chr3:102544003-102544022 | None:intergenic | 45.0% | |
| CACACTTCACGTTGCAGAAA+TGG | - | Chr3:102543857-102543876 | MsG0380017947.01.T01:intron | 45.0% | |
| CACTTAGCATTTAGGGGGTT+GGG | + | Chr3:102545555-102545574 | None:intergenic | 45.0% | |
| CATTTCTGCAACGTGAAGTG+TGG | + | Chr3:102543859-102543878 | None:intergenic | 45.0% | |
| CTATCGATGCCAACAGTCAA+TGG | + | Chr3:102544005-102544024 | None:intergenic | 45.0% | |
| CTCCAGTTTCAAACACCATG+AGG | - | Chr3:102545331-102545350 | MsG0380017947.01.T01:exon | 45.0% | |
| CTTTGCTCTCATGGATTCAC+AGG | - | Chr3:102544504-102544523 | MsG0380017947.01.T01:three_prime_UTR | 45.0% | |
| GAAAAGGAATTGGAGGTCCT+GGG | + | Chr3:102545508-102545527 | None:intergenic | 45.0% | |
| GAAGAAGCAGCAATTCCTTC+AGG | - | Chr3:102544914-102544933 | MsG0380017947.01.T01:intron | 45.0% | |
| GTCTGTTTAGACTGGGGTTT+AGG | + | Chr3:102545805-102545824 | None:intergenic | 45.0% | |
| TATTGACACCAACACCCTCA+TGG | + | Chr3:102545349-102545368 | None:intergenic | 45.0% | |
| TCACTTAGCATTTAGGGGGT+TGG | + | Chr3:102545556-102545575 | None:intergenic | 45.0% | |
| TCATCATTTGCCATCCACTG+TGG | + | Chr3:102545377-102545396 | None:intergenic | 45.0% | |
| TGTATGTACCTGTCGAAGTG+TGG | + | Chr3:102543297-102543316 | None:intergenic | 45.0% | |
| ! | ACCCTCATGGTGTTTGAAAC+TGG | + | Chr3:102545336-102545355 | None:intergenic | 45.0% |
| ! | TTCAAACACCATGAGGGTGT+TGG | - | Chr3:102545338-102545357 | MsG0380017947.01.T01:exon | 45.0% |
| !! | ACTTTCAGGTTCGTGTTCAG+AGG | + | Chr3:102543887-102543906 | None:intergenic | 45.0% |
| !! | TGGCATCGATAGTGTAAAGG+GGG | - | Chr3:102544013-102544032 | MsG0380017947.01.T01:intron | 45.0% |
| !! | TTTAAAAAATCTATAATAAA+CGG | + | Chr3:102544342-102544361 | None:intergenic | 5.0% |
| ATGTACCTGTCGAAGTGTGG+AGG | + | Chr3:102543294-102543313 | None:intergenic | 50.0% | |
| CAAGAGTCCCGAGCACAATA+TGG | - | Chr3:102545757-102545776 | MsG0380017947.01.T01:CDS | 50.0% | |
| CTGTCTCTCCTCTCAGCTTT+AGG | + | Chr3:102545876-102545895 | None:intergenic | 50.0% | |
| GGAGGAGAGAGAATCGGAAA+GGG | + | Chr3:102543276-102543295 | None:intergenic | 50.0% | |
| GTGAGATACTTGTCTCGCTG+TGG | - | Chr3:102545089-102545108 | MsG0380017947.01.T01:three_prime_UTR | 50.0% | |
| TCCTTGCTCCTAAAGCTGAG+AGG | - | Chr3:102545865-102545884 | MsG0380017947.01.T01:intron | 50.0% | |
| TCTTTATCAGGCTGCCAGAG+CGG | - | Chr3:102546000-102546019 | MsG0380017947.01.T01:intron | 50.0% | |
| TGGAGGAGAGAGAATCGGAA+AGG | + | Chr3:102543277-102543296 | None:intergenic | 50.0% | |
| !! | TCCTCTCAGCTTTAGGAGCA+AGG | + | Chr3:102545869-102545888 | None:intergenic | 50.0% |
| AGTTGGGTCGCACGAAGCTT+TGG | + | Chr3:102544674-102544693 | None:intergenic | 55.0% | |
| CTCCATTTGTGATGCCGCTC+TGG | + | Chr3:102546017-102546036 | None:intergenic | 55.0% | |
| CTGGGTTCAAACCCAGAGGA+AGG | + | Chr3:102545490-102545509 | None:intergenic | 55.0% | |
| CTTCCTCTGGGTTTGAACCC+AGG | - | Chr3:102545488-102545507 | MsG0380017947.01.T01:intron | 55.0% | |
| GTTGGGTCGCACGAAGCTTT+GGG | + | Chr3:102544673-102544692 | None:intergenic | 55.0% | |
| TCTCTCCTCCACACTTCGAC+AGG | - | Chr3:102543286-102543305 | MsG0380017947.01.T01:three_prime_UTR | 55.0% | |
| TGCCAGAGCGGCATCACAAA+TGG | - | Chr3:102546012-102546031 | MsG0380017947.01.T01:intron | 55.0% | |
| TTGGGTCGCACGAAGCTTTG+GGG | + | Chr3:102544672-102544691 | None:intergenic | 55.0% | |
| GGTCCTGGGTTCAAACCCAG+AGG | + | Chr3:102545494-102545513 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 102543126 | 102546223 | 102543126 | ID=MsG0380017947.01;Name=MsG0380017947.01 |
| Chr3 | mRNA | 102543126 | 102546223 | 102543126 | ID=MsG0380017947.01.T01;Parent=MsG0380017947.01;Name=MsG0380017947.01.T01;_AED=0.49;_eAED=0.49;_QI=38|1|1|1|0.4|0.33|6|681|141 |
| Chr3 | exon | 102543126 | 102543339 | 102543126 | ID=MsG0380017947.01.T01:exon:18293;Parent=MsG0380017947.01.T01 |
| Chr3 | exon | 102544414 | 102544528 | 102544414 | ID=MsG0380017947.01.T01:exon:18292;Parent=MsG0380017947.01.T01 |
| Chr3 | exon | 102544642 | 102544729 | 102544642 | ID=MsG0380017947.01.T01:exon:18291;Parent=MsG0380017947.01.T01 |
| Chr3 | exon | 102545077 | 102545501 | 102545077 | ID=MsG0380017947.01.T01:exon:18290;Parent=MsG0380017947.01.T01 |
| Chr3 | exon | 102545658 | 102545778 | 102545658 | ID=MsG0380017947.01.T01:exon:18289;Parent=MsG0380017947.01.T01 |
| Chr3 | exon | 102546042 | 102546223 | 102546042 | ID=MsG0380017947.01.T01:exon:18288;Parent=MsG0380017947.01.T01 |
| Chr3 | five_prime_UTR | 102546186 | 102546223 | 102546186 | ID=MsG0380017947.01.T01:five_prime_utr;Parent=MsG0380017947.01.T01 |
| Chr3 | CDS | 102546042 | 102546185 | 102546042 | ID=MsG0380017947.01.T01:cds;Parent=MsG0380017947.01.T01 |
| Chr3 | CDS | 102545658 | 102545778 | 102545658 | ID=MsG0380017947.01.T01:cds;Parent=MsG0380017947.01.T01 |
| Chr3 | CDS | 102545341 | 102545501 | 102545341 | ID=MsG0380017947.01.T01:cds;Parent=MsG0380017947.01.T01 |
| Chr3 | three_prime_UTR | 102545077 | 102545340 | 102545077 | ID=MsG0380017947.01.T01:three_prime_utr;Parent=MsG0380017947.01.T01 |
| Chr3 | three_prime_UTR | 102544642 | 102544729 | 102544642 | ID=MsG0380017947.01.T01:three_prime_utr;Parent=MsG0380017947.01.T01 |
| Chr3 | three_prime_UTR | 102544414 | 102544528 | 102544414 | ID=MsG0380017947.01.T01:three_prime_utr;Parent=MsG0380017947.01.T01 |
| Chr3 | three_prime_UTR | 102543126 | 102543339 | 102543126 | ID=MsG0380017947.01.T01:three_prime_utr;Parent=MsG0380017947.01.T01 |
| Gene Sequence |
| Protein sequence |
