AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003786.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003786.01.T01 MTR_1g069565 86.150 917 58 3 1 875 1 890 0.0 1527
MsG0180003786.01.T01 MTR_1g069565 80.082 974 68 6 1 875 1 947 0.0 1471
MsG0180003786.01.T01 MTR_1g114150 74.935 774 106 7 118 840 315 1051 0.0 1163
MsG0180003786.01.T01 MTR_1g114130 61.953 983 221 11 1 866 115 1061 0.0 1149
MsG0180003786.01.T01 MTR_1g114070 63.625 800 197 9 123 875 212 964 0.0 978
MsG0180003786.01.T01 MTR_5g065200 60.069 869 217 12 26 839 41 834 0.0 964
MsG0180003786.01.T01 MTR_1g114150 72.054 662 97 7 118 728 315 939 0.0 944
MsG0180003786.01.T01 MTR_5g047620 63.768 690 186 6 206 850 138 808 0.0 861
MsG0180003786.01.T01 MTR_0020s0100 59.276 663 173 8 206 822 80 691 0.0 747
MsG0180003786.01.T01 MTR_4g132540 47.288 719 333 13 143 837 168 864 0.0 622
MsG0180003786.01.T01 MTR_7g117445 40.086 933 402 27 64 862 36 945 0.0 599
MsG0180003786.01.T01 MTR_7g117445 40.505 911 397 26 64 845 36 930 0.0 597
MsG0180003786.01.T01 MTR_7g117445 40.505 911 397 26 64 845 36 930 0.0 597
MsG0180003786.01.T01 MTR_2g024270 46.722 717 309 12 142 837 153 817 0.0 588
MsG0180003786.01.T01 MTR_2g024140 44.861 720 306 12 142 837 33 685 0.0 568
MsG0180003786.01.T01 MTR_7g117445 38.863 844 373 25 64 778 36 865 9.09e-171 518
MsG0180003786.01.T01 MTR_1g083120 35.333 750 382 20 143 841 198 895 4.44e-129 410
MsG0180003786.01.T01 MTR_1g083120 35.286 751 383 20 142 841 214 912 4.53e-129 411
MsG0180003786.01.T01 MTR_2g024240 42.857 490 172 9 317 802 3 388 4.58e-112 349
MsG0180003786.01.T01 MTR_1g083120 34.833 689 346 20 143 780 198 834 3.57e-111 361
MsG0180003786.01.T01 MTR_1g083120 34.833 689 346 20 143 780 198 834 5.78e-111 360
MsG0180003786.01.T01 MTR_1g008060 42.135 534 231 12 139 627 866 1366 1.37e-110 373
MsG0180003786.01.T01 MTR_1g008060 72.059 136 38 0 693 828 1551 1686 1.23e-58 219
MsG0180003786.01.T01 MTR_1g008060 42.135 534 231 12 139 627 857 1357 1.84e-110 373
MsG0180003786.01.T01 MTR_1g008060 72.059 136 38 0 693 828 1542 1677 1.45e-58 219
MsG0180003786.01.T01 MTR_2g011630 32.513 772 422 16 143 838 207 955 6.92e-110 360
MsG0180003786.01.T01 MTR_2g011630 32.075 689 371 13 225 838 45 711 1.28e-97 321
MsG0180003786.01.T01 MTR_2g011630 32.075 689 371 13 225 838 77 743 2.62e-97 322
MsG0180003786.01.T01 MTR_8g062940 46.597 382 157 8 112 468 8 367 4.32e-92 295
MsG0180003786.01.T01 MTR_4g091520 33.868 561 273 15 366 838 727 1277 5.66e-75 268
MsG0180003786.01.T01 MTR_4g091520 35.556 180 106 4 138 308 255 433 3.52e-27 119
MsG0180003786.01.T01 MTR_8g013920 70.414 169 31 3 504 672 40 189 1.21e-61 207
MsG0180003786.01.T01 MTR_0295s0020 61.585 164 63 0 470 633 12 175 1.36e-59 201
MsG0180003786.01.T01 MTR_8g465700 53.691 149 65 1 443 591 33 177 2.89e-46 167
MsG0180003786.01.T01 MTR_8g465720 77.528 89 19 1 692 780 52 139 1.63e-42 152
MsG0180003786.01.T01 MTR_4g091520 30.316 475 233 15 366 752 657 1121 7.41e-41 163
MsG0180003786.01.T01 MTR_4g091520 35.556 180 106 4 138 308 255 433 2.50e-27 120
MsG0180003786.01.T01 MTR_4g091520 30.316 475 233 15 366 752 692 1156 7.56e-41 163
MsG0180003786.01.T01 MTR_4g091520 35.556 180 106 4 138 308 255 433 2.39e-27 120
MsG0180003786.01.T01 MTR_4g091520 30.316 475 233 15 366 752 727 1191 8.77e-41 163
MsG0180003786.01.T01 MTR_4g091520 35.556 180 106 4 138 308 255 433 2.89e-27 120
MsG0180003786.01.T01 MTR_3g080750 69.841 63 19 0 591 653 86 148 9.27e-21 90.1
MsG0180003786.01.T01 MTR_6g051930 89.655 29 3 0 274 302 45 73 6.73e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003786.01.T01 AT3G07610 41.189 908 371 12 26 829 35 883 0.0 637
MsG0180003786.01.T01 AT1G11950 45.772 745 293 13 143 841 193 872 0.0 621
MsG0180003786.01.T01 AT1G11950 45.772 745 293 13 143 841 193 872 0.0 621
MsG0180003786.01.T01 AT3G07610 40.022 927 377 13 26 829 35 905 0.0 617
MsG0180003786.01.T01 AT1G62310 46.091 729 294 12 143 826 209 883 0.0 612
MsG0180003786.01.T01 AT4G00990 40.722 776 357 18 141 837 78 829 1.50e-176 531
MsG0180003786.01.T01 AT1G11950 43.323 674 271 13 143 770 193 801 3.04e-171 517
MsG0180003786.01.T01 AT4G00990 39.310 725 337 18 141 786 78 778 2.66e-151 464
MsG0180003786.01.T01 AT4G00990 39.609 717 330 18 141 778 78 770 2.24e-150 462
MsG0180003786.01.T01 AT3G07610 36.686 676 304 10 26 597 35 690 1.01e-124 394
MsG0180003786.01.T01 AT1G09060 31.727 747 404 19 143 841 206 894 8.44e-103 340
MsG0180003786.01.T01 AT1G09060 31.727 747 404 19 143 841 206 894 8.44e-103 340
MsG0180003786.01.T01 AT1G09060 31.727 747 404 19 143 841 220 908 9.50e-103 341
MsG0180003786.01.T01 AT1G09060 31.727 747 404 19 143 841 220 908 9.50e-103 341
MsG0180003786.01.T01 AT4G21430 44.898 147 80 1 692 838 768 913 1.79e-34 142
MsG0180003786.01.T01 AT4G21430 30.769 156 105 3 139 292 223 377 9.53e-14 76.3

Find 214 sgRNAs with CRISPR-Local

Find 556 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGTCATTGTTGGTTTC+TGG 0.066287 1:+68184597 None:intergenic
TTTAAATATTCTTCCAATTT+AGG 0.124269 1:+68181323 None:intergenic
TGATAAAGAAAATAGTTTAT+TGG 0.211724 1:-68181402 MsG0180003786.01.T01:CDS
ATGTCTGTCATTCAATTTAC+AGG 0.214834 1:-68178911 MsG0180003786.01.T01:CDS
TTGCTCGTATGAAGCCTTTA+TGG 0.217000 1:+68181499 None:intergenic
GCTATGGTTTCTTGATTATC+AGG 0.232645 1:+68186127 None:intergenic
AATTTGCACCAATTCTTTAC+TGG 0.236831 1:-68182505 MsG0180003786.01.T01:CDS
TGTTTGTAGTGTTTGAAAAT+TGG 0.263463 1:+68186241 None:intergenic
GAGAGAGGATGTACCTAAAT+TGG 0.270507 1:-68181336 MsG0180003786.01.T01:CDS
GTCCTTATTGGTCTGTAATA+AGG 0.273383 1:-68185674 MsG0180003786.01.T01:CDS
TCTGCAGACTTGTGATTTAC+TGG 0.286546 1:+68179705 None:intergenic
TTTCTGCCACGTTTCTTTGC+CGG 0.291268 1:+68186067 None:intergenic
AGTGTTCGATTTGTGGAAAA+TGG 0.293306 1:-68181473 MsG0180003786.01.T01:CDS
TGAAGTGAAGCTGGATTCTA+AGG 0.294563 1:-68181639 MsG0180003786.01.T01:CDS
ACAGCATCCTGGACATTTCT+TGG 0.294851 1:+68184766 None:intergenic
GATTGAAGATGTGTCCTTAT+TGG 0.294904 1:-68185686 MsG0180003786.01.T01:CDS
TCACAATCATCATCGGCTTT+TGG 0.295247 1:+68183762 None:intergenic
CTTCGTGGTGGGAAGCTTCT+AGG 0.295572 1:-68183960 MsG0180003786.01.T01:CDS
TCTGGAACTGAAGAAGATTA+AGG 0.298549 1:-68185933 MsG0180003786.01.T01:CDS
CTCGCCTGGACTGGCTTAAT+TGG 0.302310 1:-68182471 MsG0180003786.01.T01:CDS
TGTTGCTGTTCAATGCATTC+AGG 0.310113 1:+68185830 None:intergenic
TATGTTATACCTTCAGATTT+CGG 0.328391 1:+68180225 None:intergenic
TAATTCATCTTCTTCCATAA+AGG 0.328727 1:-68181513 MsG0180003786.01.T01:CDS
GCAAAATAGTGTTCGATTTG+TGG 0.335906 1:-68181480 MsG0180003786.01.T01:CDS
AAGAAAATAGTTTATTGGTT+GGG 0.336358 1:-68181397 MsG0180003786.01.T01:CDS
TTTGTCTCTCCTGAAAATAT+TGG 0.339057 1:-68179765 MsG0180003786.01.T01:CDS
TCTGGCTGTAAAACATCTTT+AGG 0.339519 1:+68182301 None:intergenic
ATTATCAAGCATGTCAATCT+TGG 0.359732 1:+68181532 None:intergenic
AGAAGCATTTCAGAGAGTTC+AGG 0.360974 1:-68181301 MsG0180003786.01.T01:CDS
AACGGAGAAGGAAGCCGAAA+AGG 0.363667 1:-68186038 MsG0180003786.01.T01:CDS
TTATCAACTTCTTTGAGCTC+TGG 0.364253 1:+68181419 None:intergenic
CTTTCCTCAAATAAATTAGA+AGG 0.368022 1:+68182418 None:intergenic
AAGAGGCTTAAGGAGGAGTA+TGG 0.382059 1:-68180420 MsG0180003786.01.T01:intron
ATTCTTTAGACGGTGCTCTC+TGG 0.384591 1:-68181370 MsG0180003786.01.T01:CDS
AGAAAATAGTTTATTGGTTG+GGG 0.387608 1:-68181396 MsG0180003786.01.T01:CDS
TATGGATTTGCTCAGGAGCT+TGG 0.388333 1:-68182253 MsG0180003786.01.T01:CDS
GTGCTCTCTGGGATATCTTT+CGG 0.394357 1:-68181358 MsG0180003786.01.T01:CDS
TGTCATTCAATTTACAGGTC+TGG 0.397470 1:-68178906 MsG0180003786.01.T01:CDS
AACAGATGTGGAGGAGGATC+TGG 0.398883 1:-68185951 MsG0180003786.01.T01:CDS
GGGAGCTACATGGTGATAAT+CGG 0.399614 1:-68181565 MsG0180003786.01.T01:CDS
GCCTCCTTCTAATTTATTTG+AGG 0.400880 1:-68182422 MsG0180003786.01.T01:CDS
ATTTGCTCAGGAGCTTGGGC+GGG 0.402390 1:-68182248 MsG0180003786.01.T01:CDS
GGTTAGTGATTGCAAACTTT+AGG 0.403523 1:-68179078 MsG0180003786.01.T01:CDS
CAAGTCTGCAGAGGACAAAT+TGG 0.404949 1:-68179694 MsG0180003786.01.T01:CDS
TGTGAAAACTATTGATTGCT+TGG 0.405542 1:-68183338 MsG0180003786.01.T01:CDS
ATACCTTCAGATTTCGGACT+TGG 0.410789 1:+68180231 None:intergenic
CTCAACCTCATGGTCATTGT+TGG 0.418130 1:+68184590 None:intergenic
TTTGCTCAGGAGCTTGGGCG+GGG 0.418489 1:-68182247 MsG0180003786.01.T01:CDS
ATGGATTTGCTCAGGAGCTT+GGG 0.418850 1:-68182252 MsG0180003786.01.T01:CDS
TACATACCAACTGTTAATAC+AGG 0.419767 1:+68185567 None:intergenic
GTCCTTATTACAGACCAATA+AGG 0.427034 1:+68185672 None:intergenic
TCATCCAATCGTCTTAAATA+CGG 0.427692 1:+68184537 None:intergenic
TGGGTACACAAAGGCTCGCC+TGG 0.428484 1:-68182485 MsG0180003786.01.T01:CDS
TCAAATAAAACGTCTGATCA+TGG 0.431981 1:+68180457 None:intergenic
CTGGAACTGAAGAAGATTAA+GGG 0.432265 1:-68185932 MsG0180003786.01.T01:CDS
TATGAACTCGGCACAATGAC+GGG 0.437450 1:+68182390 None:intergenic
TTTGAAAATTGGAATGTAAA+CGG 0.438366 1:+68186252 None:intergenic
AACAACACAGTTGCTTTCAC+AGG 0.439858 1:-68186163 MsG0180003786.01.T01:CDS
TTCTTTAGACGGTGCTCTCT+GGG 0.443773 1:-68181369 MsG0180003786.01.T01:CDS
GGACTGGCTTAATTGGCCTC+AGG 0.444813 1:-68182464 MsG0180003786.01.T01:CDS
TTGCAATTGCAAAGCATGCT+TGG 0.446682 1:-68184738 MsG0180003786.01.T01:CDS
TTGTGTACCCAGTAAAGAAT+TGG 0.446939 1:+68182497 None:intergenic
TCTTGACCATTCACGAATCT+CGG 0.449180 1:+68183824 None:intergenic
AATGTACATCAGGTTTAAGC+TGG 0.453673 1:-68183426 MsG0180003786.01.T01:intron
GATTATCTGCATGGTGGAAA+TGG 0.456346 1:-68183894 MsG0180003786.01.T01:CDS
GACAAAATCAAGTGCAACCT+TGG 0.456526 1:+68179782 None:intergenic
TGAGAAGGAGTGAGCGTGCT+AGG 0.457513 1:-68186006 MsG0180003786.01.T01:CDS
ATGTCAGATGCATTCAAAAC+AGG 0.458193 1:+68183600 None:intergenic
AGGAAGAAGAAGGTGGCAAT+TGG 0.459943 1:-68185899 MsG0180003786.01.T01:CDS
TGAAATGCACGGAATGCAAC+CGG 0.461269 1:-68185606 MsG0180003786.01.T01:CDS
GAAGTATGCTTCTCAGTTCA+AGG 0.462341 1:+68183730 None:intergenic
ACACAAAGGCTCGCCTGGAC+TGG 0.464280 1:-68182480 MsG0180003786.01.T01:CDS
CTTTGTTGCTGCGAGCTTCG+TGG 0.465758 1:-68183975 MsG0180003786.01.T01:CDS
GCTTGATCTGGTCGAGAAGT+TGG 0.466266 1:-68179110 MsG0180003786.01.T01:CDS
ATTTGCACCAATTCTTTACT+GGG 0.468225 1:-68182504 MsG0180003786.01.T01:CDS
AAAGAAAATAGTTTATTGGT+TGG 0.470270 1:-68181398 MsG0180003786.01.T01:CDS
ATTCGTGAATGGTCAAGATC+TGG 0.470424 1:-68183819 MsG0180003786.01.T01:CDS
AGGGTATGCAAAATTTCTTC+CGG 0.470503 1:+68185587 None:intergenic
TGTTGATGCTGCCGCTCCTC+CGG 0.475825 1:-68186086 MsG0180003786.01.T01:CDS
TTATCAAGCATGTCAATCTT+GGG 0.478672 1:+68181533 None:intergenic
GCCGATGATGATTGTGATCA+TGG 0.480443 1:-68183756 MsG0180003786.01.T01:CDS
TCATATTGCTGAAGTGAAGC+TGG 0.481347 1:-68181648 MsG0180003786.01.T01:CDS
ATGTCCTCCTCTTTCAAGTC+AGG 0.481667 1:+68184791 None:intergenic
ACGATTGGATGAAGAACAAA+TGG 0.482210 1:-68184526 MsG0180003786.01.T01:CDS
ACGGAGAAGGAAGCCGAAAA+GGG 0.482416 1:-68186037 MsG0180003786.01.T01:CDS
AGCTTCATCAGGAGCAGCTA+TGG 0.485026 1:+68186111 None:intergenic
TGTGATTTACTGGAAGTTTG+CGG 0.485220 1:+68179715 None:intergenic
TATTGCTTATGGATTTGCTC+AGG 0.486399 1:-68182260 MsG0180003786.01.T01:CDS
GGTTTCTTGATTATCAGGAA+TGG 0.486545 1:+68186132 None:intergenic
CCATTCACGAATCTCGGGTT+GGG 0.489370 1:+68183830 None:intergenic
AAGATAAACTCAAACTCGAT+TGG 0.491141 1:+68183927 None:intergenic
GATTTGCTCAGGAGCTTGGG+CGG 0.493090 1:-68182249 MsG0180003786.01.T01:CDS
TATGTATGCTATGCTTGATC+TGG 0.494282 1:-68179122 MsG0180003786.01.T01:CDS
TGATGAAATCAATGCTGCTC+AGG 0.495231 1:-68185864 MsG0180003786.01.T01:CDS
TCTTCCGTATTTAAGACGAT+TGG 0.495391 1:-68184541 MsG0180003786.01.T01:CDS
CTTGACCATTCACGAATCTC+GGG 0.495468 1:+68183825 None:intergenic
GTAAAAGAAATGACAAGGGC+AGG 0.498499 1:-68185633 MsG0180003786.01.T01:CDS
AAACCCATCAGTATCTAGCT+AGG 0.502685 1:-68186289 MsG0180003786.01.T01:five_prime_UTR
CAGCTTCTGAACAAAAGTCC+AGG 0.502730 1:+68180289 None:intergenic
CTTTAGTTTCTTTAGGCTCA+CGG 0.504990 1:-68178958 MsG0180003786.01.T01:intron
CCTTCAGATTTCGGACTTGG+TGG 0.506047 1:+68180234 None:intergenic
AACAATTAAGCTTCAAGTTG+CGG 0.506575 1:-68183658 MsG0180003786.01.T01:CDS
TGAAGAACAAATGGCTGAGA+AGG 0.507808 1:-68184517 MsG0180003786.01.T01:CDS
GCATCAACAGAAGCTTCATC+AGG 0.508288 1:+68186100 None:intergenic
GGAGCTACATGGTGATAATC+GGG 0.514858 1:-68181564 MsG0180003786.01.T01:CDS
ACCATTCACGAATCTCGGGT+TGG 0.516372 1:+68183829 None:intergenic
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 1:+68181582 None:intergenic
GACATTGCCAAGAAATGTCC+AGG 0.520062 1:-68184773 MsG0180003786.01.T01:CDS
ACTTGGTGGGGACAACCAGC+TGG 0.521593 1:+68180248 None:intergenic
AGATTAAGGGGAAACGTGGT+AGG 0.523807 1:-68185919 MsG0180003786.01.T01:CDS
TACAGTTTACATAGGAACCT+TGG 0.524108 1:+68178878 None:intergenic
AAACTATTGATTGCTTGGAT+TGG 0.524576 1:-68183333 MsG0180003786.01.T01:CDS
GCATACCCTGTATTAACAGT+TGG 0.527233 1:-68185573 MsG0180003786.01.T01:intron
GAATATACAGATCCTTTCAA+TGG 0.530031 1:-68182349 MsG0180003786.01.T01:CDS
GGACTCACCTGCACTTATCA+AGG 0.530918 1:-68184717 MsG0180003786.01.T01:intron
CGATTTGTGGAAAATGGAAG+TGG 0.534768 1:-68181467 MsG0180003786.01.T01:CDS
ATAAAACGTCTGATCATGGA+TGG 0.535414 1:+68180461 None:intergenic
CCATTGCTCTCCTTTAAAGC+AGG 0.538406 1:-68181273 MsG0180003786.01.T01:intron
TTCAGATTTCGGACTTGGTG+GGG 0.539205 1:+68180236 None:intergenic
GGATCTGTATATTCTTTGAA+CGG 0.541600 1:+68182358 None:intergenic
TTGCAATTACCACAGCATCC+TGG 0.543302 1:+68184755 None:intergenic
CTGCCACGTTTCTTTGCCGG+AGG 0.549368 1:+68186070 None:intergenic
CGAGGGCGTGATTATCTGCA+TGG 0.550325 1:-68183903 MsG0180003786.01.T01:CDS
CGGTGGAGACTTCTGATAGT+AGG 0.550779 1:-68183638 MsG0180003786.01.T01:CDS
GACTTGTAGGAATTGAACCC+TGG 0.555009 1:-68180307 MsG0180003786.01.T01:intron
GCTTGGTATTACGTATCTGA+CGG 0.555671 1:+68183377 None:intergenic
GAACTGACCTTGATAAGTGC+AGG 0.556203 1:+68184710 None:intergenic
ACAACACAGTTGCTTTCACA+GGG 0.556589 1:-68186162 MsG0180003786.01.T01:CDS
CTTCAGATTTCGGACTTGGT+GGG 0.557725 1:+68180235 None:intergenic
TAAAACGTCTGATCATGGAT+GGG 0.558437 1:+68180462 None:intergenic
AATGCACGCCACATGACAAA+CGG 0.559884 1:+68183400 None:intergenic
GAAATCAATGCTGCTCAGGA+GGG 0.560506 1:-68185860 MsG0180003786.01.T01:CDS
GCTGGGAACCGTTTGTCATG+TGG 0.563485 1:-68183408 MsG0180003786.01.T01:CDS
CTGGGATATCTTTCGGAGAG+AGG 0.564748 1:-68181351 MsG0180003786.01.T01:CDS
AAATCAATGCTGCTCAGGAG+GGG 0.565311 1:-68185859 MsG0180003786.01.T01:CDS
CACGAAGCTCGCAGCAACAA+AGG 0.565525 1:+68183976 None:intergenic
AAACCCTAGCTAGATACTGA+TGG 0.565719 1:+68186285 None:intergenic
TGGAACTGAAGAAGATTAAG+GGG 0.565775 1:-68185931 MsG0180003786.01.T01:CDS
TGAAATCAATGCTGCTCAGG+AGG 0.567663 1:-68185861 MsG0180003786.01.T01:CDS
GCACCTTGAGCAAGACAAGA+GGG 0.570458 1:-68181585 MsG0180003786.01.T01:CDS
AAGTGGAATATGTGATGAAA+AGG 0.573587 1:-68181450 MsG0180003786.01.T01:CDS
GAGGCCAATTAAGCCAGTCC+AGG 0.578924 1:+68182467 None:intergenic
AATCAATGCTGCTCAGGAGG+GGG 0.580226 1:-68185858 MsG0180003786.01.T01:CDS
GAATAGTAGATCGTTGAATG+AGG 0.582028 1:-68185981 MsG0180003786.01.T01:CDS
TGTATATTCTTTGAACGGCA+AGG 0.583089 1:+68182363 None:intergenic
CCTGCTTTAAAGGAGAGCAA+TGG 0.584616 1:+68181273 None:intergenic
GAGTTTGAGTTTATCTTCCG+AGG 0.584896 1:-68183921 MsG0180003786.01.T01:CDS
GAAAATAGTTTATTGGTTGG+GGG 0.586081 1:-68181395 MsG0180003786.01.T01:CDS
GTTGCTGCGAGCTTCGTGGT+GGG 0.586137 1:-68183971 MsG0180003786.01.T01:CDS
GAAACGTGGTAGGAAGAAGA+AGG 0.586757 1:-68185909 MsG0180003786.01.T01:CDS
ATATGAACTCGGCACAATGA+CGG 0.586817 1:+68182389 None:intergenic
AAGGTATCCTGACTTGAAAG+AGG 0.587569 1:-68184798 MsG0180003786.01.T01:CDS
AGGTTTAGAACACCATTGAA+AGG 0.588651 1:+68182337 None:intergenic
AACCCTAGCTAGATACTGAT+GGG 0.588680 1:+68186286 None:intergenic
AACCCATCAGTATCTAGCTA+GGG 0.590250 1:-68186288 MsG0180003786.01.T01:five_prime_UTR
CAAGACAAGAGGGAGCTACA+TGG 0.591607 1:-68181575 MsG0180003786.01.T01:CDS
GTCTGCAGAGGACAAATTGG+AGG 0.593405 1:-68179691 MsG0180003786.01.T01:intron
TGTTGCTGCGAGCTTCGTGG+TGG 0.594415 1:-68183972 MsG0180003786.01.T01:CDS
TGATCTGGTCGAGAAGTTGG+AGG 0.595507 1:-68179107 MsG0180003786.01.T01:CDS
TGATTGCTTGGATTGGTGTG+AGG 0.595645 1:-68183326 MsG0180003786.01.T01:intron
ACTTGGAGAGCTCAACCTCA+TGG 0.596456 1:+68184580 None:intergenic
TTACTTAACAGATGTGGAGG+AGG 0.596713 1:-68185957 MsG0180003786.01.T01:CDS
AAAACGTCTGATCATGGATG+GGG 0.596952 1:+68180463 None:intergenic
CCCAACCCGAGATTCGTGAA+TGG 0.597529 1:-68183830 MsG0180003786.01.T01:CDS
AATTAAGCTTCAAGTTGCGG+TGG 0.598915 1:-68183655 MsG0180003786.01.T01:CDS
ACGTTTCTTTGCCGGAGGAG+CGG 0.599042 1:+68186075 None:intergenic
CTTTAGGCAACTTCACAGCA+AGG 0.600321 1:+68182317 None:intergenic
AAGAAGGTGGCAATTGGTGT+CGG 0.600696 1:-68185893 MsG0180003786.01.T01:CDS
ATGTACATCAGGTTTAAGCT+GGG 0.604955 1:-68183425 MsG0180003786.01.T01:intron
ACCATGATCACAATCATCAT+CGG 0.605104 1:+68183755 None:intergenic
CGAGTGCTTTCGTTTGACAG+AGG 0.605461 1:-68179742 MsG0180003786.01.T01:CDS
TGAGGATTACTTAACAGATG+TGG 0.606859 1:-68185963 MsG0180003786.01.T01:CDS
TAAAAGAAATGACAAGGGCA+GGG 0.606870 1:-68185632 MsG0180003786.01.T01:CDS
TCCTCAAATAAATTAGAAGG+AGG 0.607054 1:+68182421 None:intergenic
TGGAATATGTGATGAAAAGG+TGG 0.607337 1:-68181447 MsG0180003786.01.T01:CDS
AGTTTGAGTTTATCTTCCGA+GGG 0.609136 1:-68183920 MsG0180003786.01.T01:CDS
GATACATCTACAGTTTACAT+AGG 0.609345 1:+68178870 None:intergenic
TCTTTCAGTTTCAAAACCTG+AGG 0.609559 1:+68182448 None:intergenic
AGCTTCTGAACAAAAGTCCA+GGG 0.617796 1:+68180290 None:intergenic
AGCACCTTGAGCAAGACAAG+AGG 0.618569 1:-68181586 MsG0180003786.01.T01:CDS
GAGATAGAAGCAAAGAGACA+AGG 0.619116 1:-68184495 MsG0180003786.01.T01:intron
TCGGGTTGGGCAGCAGCACG+AGG 0.619296 1:+68183843 None:intergenic
ATGCATTGAACAGCAACAGA+TGG 0.621495 1:-68185825 MsG0180003786.01.T01:intron
CGGCAAGGAAGATATGAACT+CGG 0.631163 1:+68182378 None:intergenic
TCGAGAAGTTGGAGGAAGCA+AGG 0.632086 1:-68179099 MsG0180003786.01.T01:CDS
GGATTACTTAACAGATGTGG+AGG 0.635978 1:-68185960 MsG0180003786.01.T01:CDS
CATACACAATAGCACAAGGA+AGG 0.637072 1:-68183580 MsG0180003786.01.T01:CDS
GCTCCTCCGGCAAAGAAACG+TGG 0.637351 1:-68186073 MsG0180003786.01.T01:CDS
CATGCAGATAATCACGCCCT+CGG 0.639805 1:+68183904 None:intergenic
TTACAGGTCTGGAGAAACCA+AGG 0.639931 1:-68178895 MsG0180003786.01.T01:CDS
CCACCAAGTCCGAAATCTGA+AGG 0.644909 1:-68180234 MsG0180003786.01.T01:intron
GAAGTGAAGCTGGATTCTAA+GGG 0.652860 1:-68181638 MsG0180003786.01.T01:CDS
AAAAGGGCGAAAGTGTGAGA+AGG 0.653518 1:-68186021 MsG0180003786.01.T01:CDS
CTGACATACACAATAGCACA+AGG 0.658068 1:-68183584 MsG0180003786.01.T01:CDS
GGGCAGGGTTGTGAAATGCA+CGG 0.660572 1:-68185617 MsG0180003786.01.T01:CDS
GGATGGCTTGCAGACAGTGA+TGG 0.662046 1:-68183798 MsG0180003786.01.T01:CDS
ATTCTTTACTGGGTACACAA+AGG 0.662591 1:-68182494 MsG0180003786.01.T01:CDS
ATGAACTCGGCACAATGACG+GGG 0.667242 1:+68182391 None:intergenic
GTATCCTGACTTGAAAGAGG+AGG 0.668706 1:-68184795 MsG0180003786.01.T01:CDS
TCAATGTAAAAGAAATGACA+AGG 0.668906 1:-68185638 MsG0180003786.01.T01:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.669451 1:-68183957 MsG0180003786.01.T01:CDS
CTACATGGTGATAATCGGGA+CGG 0.669945 1:-68181560 MsG0180003786.01.T01:CDS
GTGAATGGTCAAGATCTGGA+TGG 0.677090 1:-68183815 MsG0180003786.01.T01:CDS
AGTAAATCACAAGTCTGCAG+AGG 0.679551 1:-68179703 MsG0180003786.01.T01:CDS
ACATACCAACTGTTAATACA+GGG 0.682457 1:+68185568 None:intergenic
AAGAAATGTCCAGGATGCTG+TGG 0.691596 1:-68184764 MsG0180003786.01.T01:CDS
GGGCGTGATTATCTGCATGG+TGG 0.701277 1:-68183900 MsG0180003786.01.T01:CDS
CTGCATCTGACATATCACAA+TGG 0.702155 1:+68182206 None:intergenic
ACGTGGTAGGAAGAAGAAGG+TGG 0.709702 1:-68185906 MsG0180003786.01.T01:CDS
AAGAAGATTAAGGGGAAACG+TGG 0.711553 1:-68185923 MsG0180003786.01.T01:CDS
CAATGTAAAAGAAATGACAA+GGG 0.715489 1:-68185637 MsG0180003786.01.T01:CDS
GAAAATTGGAATGTAAACGG+CGG 0.717466 1:+68186255 None:intergenic
AGAAACCAACAATGACCATG+AGG 0.730663 1:-68184595 MsG0180003786.01.T01:CDS
CAACACAGTTGCTTTCACAG+GGG 0.779411 1:-68186161 MsG0180003786.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAATATTTATTAT+CGG - Chr1:68180317-68180336 MsG0180003786.01.T01:intron 0.0%
!!! ACTATAATTTTACTTTATTT+AGG - Chr1:68181977-68181996 MsG0180003786.01.T01:intron 10.0%
!!! ATTTTTCAAAAGAAAAAATT+GGG + Chr1:68184218-68184237 None:intergenic 10.0%
!!! CTATAATTTTACTTTATTTA+GGG - Chr1:68181978-68181997 MsG0180003786.01.T01:intron 10.0%
!!! TATTTTTCAAAAGAAAAAAT+TGG + Chr1:68184219-68184238 None:intergenic 10.0%
!!! TTCTTTTGAAAAATAATTTT+TGG - Chr1:68184224-68184243 MsG0180003786.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTGTCTTT+GGG - Chr1:68180968-68180987 MsG0180003786.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTGTCTT+TGG - Chr1:68180967-68180986 MsG0180003786.01.T01:intron 10.0%
!! TGATAAAGAAAATAGTTTAT+TGG - Chr1:68183789-68183808 MsG0180003786.01.T01:CDS 15.0%
!! TTTAAATATTCTTCCAATTT+AGG + Chr1:68183871-68183890 None:intergenic 15.0%
!!! AAAAATATTTATTATCGGTT+TGG - Chr1:68180322-68180341 MsG0180003786.01.T01:intron 15.0%
!!! ATAATTTTCTATTATCTGTT+GGG - Chr1:68183955-68183974 MsG0180003786.01.T01:CDS 15.0%
!!! ATTTAAAATAGATGATCAAA+AGG - Chr1:68185177-68185196 MsG0180003786.01.T01:intron 15.0%
!! AAAGAAAATAGTTTATTGGT+TGG - Chr1:68183793-68183812 MsG0180003786.01.T01:CDS 20.0%
!! AAAGAAAATGAATACAACTA+GGG + Chr1:68182524-68182543 None:intergenic 20.0%
!! ACAGAATAAAACATAAGTTA+AGG + Chr1:68179662-68179681 None:intergenic 20.0%
!! ATAAAAATTGCAGAAATTAC+TGG + Chr1:68182636-68182655 None:intergenic 20.0%
!! ATTAAGATTATCAACTCAAT+GGG + Chr1:68184570-68184589 None:intergenic 20.0%
!! CAAAAAAAAACTTTCTTGAA+TGG - Chr1:68185227-68185246 MsG0180003786.01.T01:intron 20.0%
!! GAAATTAAATACAAATAGAG+TGG + Chr1:68184675-68184694 None:intergenic 20.0%
!! GGTATAACATACATATATTA+TGG - Chr1:68184978-68184997 MsG0180003786.01.T01:intron 20.0%
!! TAAAATATCATAAGACATTG+TGG + Chr1:68183048-68183067 None:intergenic 20.0%
!! TAATTGAGTATCATATTGAA+AGG - Chr1:68183091-68183110 MsG0180003786.01.T01:intron 20.0%
!! TACATTGTTTATAAAAGTGA+AGG + Chr1:68180169-68180188 None:intergenic 20.0%
!! TATTAAGATTATCAACTCAA+TGG + Chr1:68184571-68184590 None:intergenic 20.0%
!! TGTAGATTTATGTTTGAATT+TGG - Chr1:68179429-68179448 MsG0180003786.01.T01:intron 20.0%
!! TTAATGACTCAAGTTAAAAT+GGG + Chr1:68183985-68184004 None:intergenic 20.0%
!! TTTGAAAATTGGAATGTAAA+CGG + Chr1:68178942-68178961 None:intergenic 20.0%
!!! AAGAAAATAGTTTATTGGTT+GGG - Chr1:68183794-68183813 MsG0180003786.01.T01:CDS 20.0%
!!! AATAATTTTTGGTACATACT+TGG - Chr1:68184235-68184254 MsG0180003786.01.T01:intron 20.0%
!!! CATAAGCAATATATGTTTTT+GGG + Chr1:68182922-68182941 None:intergenic 20.0%
!!! CTAAATTTGTTGATAATGTT+GGG + Chr1:68182318-68182337 None:intergenic 20.0%
!!! GATAATTTTCTATTATCTGT+TGG - Chr1:68183954-68183973 MsG0180003786.01.T01:CDS 20.0%
!!! GTGAAAAACATGATATTTTA+GGG - Chr1:68180260-68180279 MsG0180003786.01.T01:CDS 20.0%
!!! TACATAACTTTAGTTTCTTT+AGG - Chr1:68186226-68186245 MsG0180003786.01.T01:five_prime_UTR 20.0%
!!! TCATTTTATAAGGTATCTTT+TGG - Chr1:68183346-68183365 MsG0180003786.01.T01:CDS 20.0%
!!! TCTAAATTTGTTGATAATGT+TGG + Chr1:68182319-68182338 None:intergenic 20.0%
! AAAAAATTGGGTACTTTGTT+TGG + Chr1:68184206-68184225 None:intergenic 25.0%
! AAAGAAGCTAATAACAAAAC+AGG + Chr1:68185598-68185617 None:intergenic 25.0%
! AAAGGAATAACTTTCTTGAA+TGG - Chr1:68185195-68185214 MsG0180003786.01.T01:intron 25.0%
! AAGAAAATGAATACAACTAG+GGG + Chr1:68182523-68182542 None:intergenic 25.0%
! AAGCAACACACATTAATAAA+AGG + Chr1:68180782-68180801 None:intergenic 25.0%
! AATAACACCTTTGATATTGT+AGG - Chr1:68184698-68184717 MsG0180003786.01.T01:intron 25.0%
! ACAGGAATAGTTAATCTATA+AGG + Chr1:68180511-68180530 None:intergenic 25.0%
! AGGAATAGTTAATCTATAAG+GGG + Chr1:68180509-68180528 None:intergenic 25.0%
! ATTCAACAAGTAAAAACAGT+TGG + Chr1:68185902-68185921 None:intergenic 25.0%
! CAATGTAAAAGAAATGACAA+GGG - Chr1:68179554-68179573 MsG0180003786.01.T01:intron 25.0%
! CAGGAATAGTTAATCTATAA+GGG + Chr1:68180510-68180529 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG - Chr1:68182920-68182939 MsG0180003786.01.T01:intron 25.0%
! CTTTCCTCAAATAAATTAGA+AGG + Chr1:68182776-68182795 None:intergenic 25.0%
! GAAAGAAAATGAATACAACT+AGG + Chr1:68182525-68182544 None:intergenic 25.0%
! GATATGCAATATCTCAATAT+TGG + Chr1:68185576-68185595 None:intergenic 25.0%
! GATGAGAGAAGTTATAATTA+AGG + Chr1:68182365-68182384 None:intergenic 25.0%
! GTCACTGTATATGTAATATT+AGG - Chr1:68184058-68184077 MsG0180003786.01.T01:intron 25.0%
! GTTAATGACTCAAGTTAAAA+TGG + Chr1:68183986-68184005 None:intergenic 25.0%
! TAATGACTCAAGTTAAAATG+GGG + Chr1:68183984-68184003 None:intergenic 25.0%
! TAATTCATCTTCTTCCATAA+AGG - Chr1:68183678-68183697 MsG0180003786.01.T01:CDS 25.0%
! TACTGAAAGTAAAACTAACT+GGG + Chr1:68184023-68184042 None:intergenic 25.0%
! TATGTTATACCTTCAGATTT+CGG + Chr1:68184969-68184988 None:intergenic 25.0%
! TATTGAAACATATGATATGC+AGG - Chr1:68184528-68184547 MsG0180003786.01.T01:CDS 25.0%
! TCAATGTAAAAGAAATGACA+AGG - Chr1:68179553-68179572 MsG0180003786.01.T01:intron 25.0%
! TGTTTATAAAAGTGAAGGTT+GGG + Chr1:68180164-68180183 None:intergenic 25.0%
! TGTTTGTAGTGTTTGAAAAT+TGG + Chr1:68178953-68178972 None:intergenic 25.0%
! TTACATGTTGTATGTAATTG+TGG - Chr1:68179454-68179473 MsG0180003786.01.T01:intron 25.0%
! TTACTGAAAGTAAAACTAAC+TGG + Chr1:68184024-68184043 None:intergenic 25.0%
! TTGTATATTTGCAGACAAAT+AGG + Chr1:68182283-68182302 None:intergenic 25.0%
! TTGTGATCTTTGCTAAAATT+TGG - Chr1:68181949-68181968 MsG0180003786.01.T01:intron 25.0%
! TTGTTTATAAAAGTGAAGGT+TGG + Chr1:68180165-68180184 None:intergenic 25.0%
!! AACATGTTTCTTGTTTAATC+TGG - Chr1:68183498-68183517 MsG0180003786.01.T01:intron 25.0%
!! AAGTATTTTCAGCATATACT+TGG + Chr1:68180631-68180650 None:intergenic 25.0%
!! ACACAATTAATCAAAAGTGT+CGG - Chr1:68184129-68184148 MsG0180003786.01.T01:intron 25.0%
!! ACATTTGAAATGTGATAATC+TGG - Chr1:68180546-68180565 MsG0180003786.01.T01:intron 25.0%
!! ACTAATTTTACCTGCTTTAA+AGG + Chr1:68183931-68183950 None:intergenic 25.0%
!! AGAAAATAGTTTATTGGTTG+GGG - Chr1:68183795-68183814 MsG0180003786.01.T01:CDS 25.0%
!! AGATAGCATCAATTTTATCA+TGG + Chr1:68184092-68184111 None:intergenic 25.0%
!! AGTATTTTCAAAGAACACTA+CGG + Chr1:68183219-68183238 None:intergenic 25.0%
!! ATTAGCTGCATCATTTTATA+AGG - Chr1:68183336-68183355 MsG0180003786.01.T01:CDS 25.0%
!! CATACATGTTTTCTGAATTT+GGG - Chr1:68182037-68182056 MsG0180003786.01.T01:intron 25.0%
!! CCATAAGCAATATATGTTTT+TGG + Chr1:68182923-68182942 None:intergenic 25.0%
!! GGTGAAAAACATGATATTTT+AGG - Chr1:68180259-68180278 MsG0180003786.01.T01:CDS 25.0%
!! TAACAATCTTTTGATATGAC+AGG + Chr1:68185982-68186001 None:intergenic 25.0%
!! TCATACATGTTTTCTGAATT+TGG - Chr1:68182036-68182055 MsG0180003786.01.T01:intron 25.0%
!! TTACTGTTCCAACTAATTTT+TGG - Chr1:68182173-68182192 MsG0180003786.01.T01:intron 25.0%
!! TTTTGCTTTACATACTAACT+CGG + Chr1:68181502-68181521 None:intergenic 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG - Chr1:68181700-68181719 MsG0180003786.01.T01:intron 25.0%
!!! CATGATATTTTAGGGATATT+TGG - Chr1:68180268-68180287 MsG0180003786.01.T01:CDS 25.0%
!!! CTTTTGTGTCAGTTTTTTAA+TGG + Chr1:68183587-68183606 None:intergenic 25.0%
!!! TCTGTGCTTCATTTTTTTTT+TGG - Chr1:68183434-68183453 MsG0180003786.01.T01:intron 25.0%
!!! TGTCATTTCTTTTACATTGA+TGG + Chr1:68179553-68179572 None:intergenic 25.0%
!!! TTTATTATCGGTTTGGATTT+TGG - Chr1:68180329-68180348 MsG0180003786.01.T01:intron 25.0%
AACCTATTAGTGTTTGAATC+TGG + Chr1:68185742-68185761 None:intergenic 30.0%
AAGATAAACTCAAACTCGAT+TGG + Chr1:68181267-68181286 None:intergenic 30.0%
AAGTGGAATATGTGATGAAA+AGG - Chr1:68183741-68183760 MsG0180003786.01.T01:CDS 30.0%
AAGTTTCTCTTAATCCCAAA+AGG + Chr1:68182072-68182091 None:intergenic 30.0%
AATCCAAAAGAAAGAAGAAG+AGG + Chr1:68180860-68180879 None:intergenic 30.0%
AATGTACTTGAATGTACATC+AGG - Chr1:68181755-68181774 MsG0180003786.01.T01:intron 30.0%
AATTAGTTGGAACAGTAACT+TGG + Chr1:68182171-68182190 None:intergenic 30.0%
AATTGATAAACTCACACTTG+AGG + Chr1:68179857-68179876 None:intergenic 30.0%
AATTTGCACCAATTCTTTAC+TGG - Chr1:68182686-68182705 MsG0180003786.01.T01:intron 30.0%
ACACAAGATAACCAACAAAT+AGG + Chr1:68179696-68179715 None:intergenic 30.0%
ACATACCAACTGTTAATACA+GGG + Chr1:68179626-68179645 None:intergenic 30.0%
AGAAGAGAGAGAATACATAT+AGG - Chr1:68185083-68185102 MsG0180003786.01.T01:intron 30.0%
AGTACATTGCTGACAATTAT+AGG + Chr1:68181743-68181762 None:intergenic 30.0%
ATGAAGTATGACTTGAGTAA+TGG + Chr1:68182113-68182132 None:intergenic 30.0%
ATGGATCTGCTAATAAGTAT+AGG + Chr1:68183391-68183410 None:intergenic 30.0%
ATGTCTGTCATTCAATTTAC+AGG - Chr1:68186280-68186299 MsG0180003786.01.T01:five_prime_UTR 30.0%
ATTATCAAGCATGTCAATCT+TGG + Chr1:68183662-68183681 None:intergenic 30.0%
ATTCCCATCAGTATATTCAT+GGG - Chr1:68185124-68185143 MsG0180003786.01.T01:intron 30.0%
ATTCCTTATTCATGTCATGA+CGG + Chr1:68184488-68184507 None:intergenic 30.0%
ATTGATAAACTCACACTTGA+GGG + Chr1:68179856-68179875 None:intergenic 30.0%
ATTTGCACCAATTCTTTACT+GGG - Chr1:68182687-68182706 MsG0180003786.01.T01:intron 30.0%
CAAGTATGATACAGTAACAT+AGG + Chr1:68185958-68185977 None:intergenic 30.0%
CATTGTAACCTAAAACCTTA+AGG - Chr1:68180108-68180127 MsG0180003786.01.T01:intron 30.0%
GAATATACAGATCCTTTCAA+TGG - Chr1:68182842-68182861 MsG0180003786.01.T01:intron 30.0%
GAGCTAGTGATAGATAATTT+AGG + Chr1:68185298-68185317 None:intergenic 30.0%
GGAATAGTTAATCTATAAGG+GGG + Chr1:68180508-68180527 None:intergenic 30.0%
GGATCTGTATATTCTTTGAA+CGG + Chr1:68182836-68182855 None:intergenic 30.0%
GTATCACAAATCCATAACAT+AGG + Chr1:68186139-68186158 None:intergenic 30.0%
GTGTGACAAACTATATAGAA+AGG + Chr1:68182547-68182566 None:intergenic 30.0%
TACATACCAACTGTTAATAC+AGG + Chr1:68179627-68179646 None:intergenic 30.0%
TAGATCAAGCAAAAAGAACA+GGG + Chr1:68182473-68182492 None:intergenic 30.0%
TATATAAGATAGTGTGAAGC+AGG + Chr1:68180900-68180919 None:intergenic 30.0%
TCAAATAAAACGTCTGATCA+TGG + Chr1:68184737-68184756 None:intergenic 30.0%
TCAAATCAACAAATGTAGCA+TGG + Chr1:68185532-68185551 None:intergenic 30.0%
TCATCCAATCGTCTTAAATA+CGG + Chr1:68180657-68180676 None:intergenic 30.0%
TCCTCAAATAAATTAGAAGG+AGG + Chr1:68182773-68182792 None:intergenic 30.0%
TGAACAACCTACAATATCAA+AGG + Chr1:68184708-68184727 None:intergenic 30.0%
TGAATGCATACTCTATTATG+AGG - Chr1:68183468-68183487 MsG0180003786.01.T01:intron 30.0%
TGAATGTCTTGAAAAGATGT+TGG - Chr1:68182141-68182160 MsG0180003786.01.T01:intron 30.0%
TGTAGAATACAACAAATCAC+AGG + Chr1:68180529-68180548 None:intergenic 30.0%
TGTATAACAATAAACTGAGC+TGG + Chr1:68184347-68184366 None:intergenic 30.0%
TGTTATACATGACAGTCTTT+GGG - Chr1:68184358-68184377 MsG0180003786.01.T01:intron 30.0%
TTAGCAGTAACCAAAACAAA+AGG + Chr1:68183289-68183308 None:intergenic 30.0%
TTATCAAGCATGTCAATCTT+GGG + Chr1:68183661-68183680 None:intergenic 30.0%
TTGTTATACATGACAGTCTT+TGG - Chr1:68184357-68184376 MsG0180003786.01.T01:intron 30.0%
TTTGTCTCTCCTGAAAATAT+TGG - Chr1:68185426-68185445 MsG0180003786.01.T01:intron 30.0%
! AAACTATTGATTGCTTGGAT+TGG - Chr1:68181858-68181877 MsG0180003786.01.T01:intron 30.0%
! ATTCATAGTCTTTCTAGCAT+TGG - Chr1:68183017-68183036 MsG0180003786.01.T01:intron 30.0%
! ATTTGTTGGTTATCTTGTGT+GGG - Chr1:68179696-68179715 MsG0180003786.01.T01:CDS 30.0%
! GAAAATAGTTTATTGGTTGG+GGG - Chr1:68183796-68183815 MsG0180003786.01.T01:CDS 30.0%
! GTAGTGAAGATTTTCTTTCA+CGG + Chr1:68185259-68185278 None:intergenic 30.0%
! TACCAAGCAAAAAACACTTT+TGG - Chr1:68181829-68181848 MsG0180003786.01.T01:intron 30.0%
! TATTTGTTGGTTATCTTGTG+TGG - Chr1:68179695-68179714 MsG0180003786.01.T01:CDS 30.0%
! TCTCCATTTGAATTTTTCCA+TGG - Chr1:68178988-68179007 MsG0180003786.01.T01:intron 30.0%
! TGTGAAAACTATTGATTGCT+TGG - Chr1:68181853-68181872 MsG0180003786.01.T01:intron 30.0%
! TTACTGTTTCTCAATCAACA+GGG - Chr1:68179482-68179501 MsG0180003786.01.T01:intron 30.0%
!! AACAATTAAGCTTCAAGTTG+CGG - Chr1:68181533-68181552 MsG0180003786.01.T01:CDS 30.0%
!! ACAATTCAACATTGACTTGT+AGG - Chr1:68184871-68184890 MsG0180003786.01.T01:intron 30.0%
!! AGTAACATAGGTTCTGAAAT+AGG + Chr1:68185946-68185965 None:intergenic 30.0%
!! ATGTTTTTGCTGTCTTATGA+AGG - Chr1:68180374-68180393 MsG0180003786.01.T01:intron 30.0%
!! CAGATTCTAAAACAGCTATT+GGG + Chr1:68185640-68185659 None:intergenic 30.0%
!! TTAACTTGCTTCCTATTTGT+TGG - Chr1:68179682-68179701 MsG0180003786.01.T01:intron 30.0%
!! TTGAAAGGTGCATAGTTTTT+AGG - Chr1:68183106-68183125 MsG0180003786.01.T01:intron 30.0%
!!! AGGTTTTGAAACTGAAAGAT+TGG - Chr1:68182747-68182766 MsG0180003786.01.T01:intron 30.0%
!!! ATCCAAAAGTGTTTTTTGCT+TGG + Chr1:68181834-68181853 None:intergenic 30.0%
!!! CAATAGCTGTTTTAGAATCT+GGG - Chr1:68185639-68185658 MsG0180003786.01.T01:CDS 30.0%
!!! CTTGTTTAATCTGGCTTTTT+AGG - Chr1:68183507-68183526 MsG0180003786.01.T01:intron 30.0%
!!! GTGTTACTTACCTTTTGTTT+TGG - Chr1:68183276-68183295 MsG0180003786.01.T01:intron 30.0%
!!! TAAGGTTTTAGGTTACAATG+TGG + Chr1:68180108-68180127 None:intergenic 30.0%
AAAAACGTGTCTAGACTAGA+TGG - Chr1:68182213-68182232 MsG0180003786.01.T01:CDS 35.0%
AACCTAAAACCTTAAGGCAA+TGG - Chr1:68180114-68180133 MsG0180003786.01.T01:intron 35.0%
AAGACAGCAAAAACATACAC+TGG + Chr1:68180370-68180389 None:intergenic 35.0%
AATGTACATCAGGTTTAAGC+TGG - Chr1:68181765-68181784 MsG0180003786.01.T01:intron 35.0%
ACAGTATAAGAAGTTCTCAC+TGG + Chr1:68181655-68181674 None:intergenic 35.0%
ACCATGATCACAATCATCAT+CGG + Chr1:68181439-68181458 None:intergenic 35.0%
ACCTAAAACCTTAAGGCAAT+GGG - Chr1:68180115-68180134 MsG0180003786.01.T01:intron 35.0%
ACGATTGGATGAAGAACAAA+TGG - Chr1:68180665-68180684 MsG0180003786.01.T01:intron 35.0%
AGGGTATGCAAAATTTCTTC+CGG + Chr1:68179607-68179626 None:intergenic 35.0%
AGTATAAGTGCAAGTGTATG+TGG + Chr1:68179915-68179934 None:intergenic 35.0%
ATAAAACGTCTGATCATGGA+TGG + Chr1:68184733-68184752 None:intergenic 35.0%
ATATCGAAAGTTCAGGTCAT+GGG + Chr1:68179969-68179988 None:intergenic 35.0%
ATGAAAGAACTTCCACTTGA+GGG + Chr1:68179892-68179911 None:intergenic 35.0%
ATGTACATCAGGTTTAAGCT+GGG - Chr1:68181766-68181785 MsG0180003786.01.T01:intron 35.0%
ATGTCAGATGCATTCAAAAC+AGG + Chr1:68181594-68181613 None:intergenic 35.0%
ATTCTTTACTGGGTACACAA+AGG - Chr1:68182697-68182716 MsG0180003786.01.T01:intron 35.0%
CAAACTTTAGGCCTATGTTA+TGG - Chr1:68186125-68186144 MsG0180003786.01.T01:CDS 35.0%
CACAATACAAGCTCAAGATA+TGG + Chr1:68181934-68181953 None:intergenic 35.0%
CACTTTAACCCAAAACCTTA+AGG - Chr1:68179788-68179807 MsG0180003786.01.T01:CDS 35.0%
CAGATAGACATGTCATGTAA+AGG + Chr1:68182610-68182629 None:intergenic 35.0%
CTCATCTTTCTCTTAGTCAT+AGG - Chr1:68182379-68182398 MsG0180003786.01.T01:CDS 35.0%
CTGGAACTGAAGAAGATTAA+GGG - Chr1:68179259-68179278 MsG0180003786.01.T01:intron 35.0%
CTTGGCTTATTGGAACAATT+TGG - Chr1:68185662-68185681 MsG0180003786.01.T01:CDS 35.0%
GAAAATTGGAATGTAAACGG+CGG + Chr1:68178939-68178958 None:intergenic 35.0%
GAATAGTAGATCGTTGAATG+AGG - Chr1:68179210-68179229 MsG0180003786.01.T01:intron 35.0%
GATACACATGAGTACTTCTT+GGG + Chr1:68184184-68184203 None:intergenic 35.0%
GATTCCCATCAGTATATTCA+TGG - Chr1:68185123-68185142 MsG0180003786.01.T01:intron 35.0%
GATTGAAGATGTGTCCTTAT+TGG - Chr1:68179505-68179524 MsG0180003786.01.T01:intron 35.0%
GCCTCCTTCTAATTTATTTG+AGG - Chr1:68182769-68182788 MsG0180003786.01.T01:intron 35.0%
GCTATGGTTTCTTGATTATC+AGG + Chr1:68179067-68179086 None:intergenic 35.0%
GGAATAACTTTCTTGAATGG+TGG - Chr1:68185198-68185217 MsG0180003786.01.T01:intron 35.0%
GGTTAGTGATTGCAAACTTT+AGG - Chr1:68186113-68186132 MsG0180003786.01.T01:CDS 35.0%
GGTTTCTTGATTATCAGGAA+TGG + Chr1:68179062-68179081 None:intergenic 35.0%
GTAGATCAAGCAAAAAGAAC+AGG + Chr1:68182474-68182493 None:intergenic 35.0%
GTCCAGATTCAAACACTAAT+AGG - Chr1:68185737-68185756 MsG0180003786.01.T01:intron 35.0%
GTCCTTATTACAGACCAATA+AGG + Chr1:68179522-68179541 None:intergenic 35.0%
GTGATTTATCTCCAATATCC+CGG + Chr1:68184385-68184404 None:intergenic 35.0%
GTGCAACAAGCAAAAAAGTA+AGG + Chr1:68183197-68183216 None:intergenic 35.0%
TAAAACGTCTGATCATGGAT+GGG + Chr1:68184732-68184751 None:intergenic 35.0%
TAAAAGAAATGACAAGGGCA+GGG - Chr1:68179559-68179578 MsG0180003786.01.T01:intron 35.0%
TATACACTTTGTGGCAAACA+AGG + Chr1:68185033-68185052 None:intergenic 35.0%
TATATCGAAAGTTCAGGTCA+TGG + Chr1:68179970-68179989 None:intergenic 35.0%
TATGTATGCTATGCTTGATC+TGG - Chr1:68186069-68186088 MsG0180003786.01.T01:CDS 35.0%
TCTGGCTGTAAAACATCTTT+AGG + Chr1:68182893-68182912 None:intergenic 35.0%
TCTTTCAGTTTCAAAACCTG+AGG + Chr1:68182746-68182765 None:intergenic 35.0%
TGACCTGAACTTTCGATATA+AGG - Chr1:68179970-68179989 MsG0180003786.01.T01:intron 35.0%
TGACTATCGAGCATAAAAAG+AGG - Chr1:68184754-68184773 MsG0180003786.01.T01:CDS 35.0%
TGAGGATTACTTAACAGATG+TGG - Chr1:68179228-68179247 MsG0180003786.01.T01:intron 35.0%
TGGAACTGAAGAAGATTAAG+GGG - Chr1:68179260-68179279 MsG0180003786.01.T01:intron 35.0%
TGGAATATGTGATGAAAAGG+TGG - Chr1:68183744-68183763 MsG0180003786.01.T01:CDS 35.0%
TGTATATTCTTTGAACGGCA+AGG + Chr1:68182831-68182850 None:intergenic 35.0%
TGTCATTCAATTTACAGGTC+TGG - Chr1:68186285-68186304 MsG0180003786.01.T01:five_prime_UTR 35.0%
TGTGATTTACTGGAAGTTTG+CGG + Chr1:68185479-68185498 None:intergenic 35.0%
TTATCAACTTCTTTGAGCTC+TGG + Chr1:68183775-68183794 None:intergenic 35.0%
TTCAATAACAAGACGTTGTG+TGG + Chr1:68180215-68180234 None:intergenic 35.0%
TTCCCATCAGTATATTCATG+GGG - Chr1:68185125-68185144 MsG0180003786.01.T01:intron 35.0%
TTCTCTTAATCCCAAAAGGA+TGG + Chr1:68182068-68182087 None:intergenic 35.0%
TTGATAAACTCACACTTGAG+GGG + Chr1:68179855-68179874 None:intergenic 35.0%
TTGTGTACCCAGTAAAGAAT+TGG + Chr1:68182697-68182716 None:intergenic 35.0%
TTTGGGTACATCTTGAATGT+TGG - Chr1:68184279-68184298 MsG0180003786.01.T01:intron 35.0%
! ACTCCTCTTCTTCTTTCTTT+TGG - Chr1:68180854-68180873 MsG0180003786.01.T01:intron 35.0%
! AGGTTTAGAACACCATTGAA+AGG + Chr1:68182857-68182876 None:intergenic 35.0%
! AGTGTTCGATTTGTGGAAAA+TGG - Chr1:68183718-68183737 MsG0180003786.01.T01:CDS 35.0%
! AGTTTGAGTTTATCTTCCGA+GGG - Chr1:68181271-68181290 MsG0180003786.01.T01:intron 35.0%
! ATTGCTGCTTCTTTGGTAAA+AGG - Chr1:68186033-68186052 MsG0180003786.01.T01:CDS 35.0%
! ATTTGAATTTTTCCATGGCG+GGG - Chr1:68178993-68179012 MsG0180003786.01.T01:intron 35.0%
! CAAACACTAATAGGTTGAAC+TGG - Chr1:68185746-68185765 MsG0180003786.01.T01:intron 35.0%
! CATTTGAATTTTTCCATGGC+GGG - Chr1:68178992-68179011 MsG0180003786.01.T01:intron 35.0%
! CCATTTGAATTTTTCCATGG+CGG - Chr1:68178991-68179010 MsG0180003786.01.T01:intron 35.0%
! CTTTAGTTTCTTTAGGCTCA+CGG - Chr1:68186233-68186252 MsG0180003786.01.T01:five_prime_UTR 35.0%
! GCAAAATAGTGTTCGATTTG+TGG - Chr1:68183711-68183730 MsG0180003786.01.T01:CDS 35.0%
! GTCCTTATTGGTCTGTAATA+AGG - Chr1:68179517-68179536 MsG0180003786.01.T01:intron 35.0%
! GTTACTGTTTCTCAATCAAC+AGG - Chr1:68179481-68179500 MsG0180003786.01.T01:intron 35.0%
! TAAGACATTTTCAATGGCAC+TGG - Chr1:68181706-68181725 MsG0180003786.01.T01:intron 35.0%
! TACTGTTTCTCAATCAACAG+GGG - Chr1:68179483-68179502 MsG0180003786.01.T01:intron 35.0%
! TATTGCTTATGGATTTGCTC+AGG - Chr1:68182931-68182950 MsG0180003786.01.T01:intron 35.0%
! TCTGGAACTGAAGAAGATTA+AGG - Chr1:68179258-68179277 MsG0180003786.01.T01:intron 35.0%
! TCTTCCGTATTTAAGACGAT+TGG - Chr1:68180650-68180669 MsG0180003786.01.T01:intron 35.0%
! TGAAGATTTTCTTTCACGGT+TGG + Chr1:68185255-68185274 None:intergenic 35.0%
! TTATCTGATTGCTGCTTCTT+TGG - Chr1:68186026-68186045 MsG0180003786.01.T01:CDS 35.0%
! TTGGGTATTTCCATCCTTTT+GGG - Chr1:68182055-68182074 MsG0180003786.01.T01:intron 35.0%
! TTTGGGTATTTCCATCCTTT+TGG - Chr1:68182054-68182073 MsG0180003786.01.T01:intron 35.0%
! TTTGTTGGTTATCTTGTGTG+GGG - Chr1:68179697-68179716 MsG0180003786.01.T01:CDS 35.0%
!! AAGGGCAACAAAAAGTACTT+GGG + Chr1:68182496-68182515 None:intergenic 35.0%
!! CCAGATTCTAAAACAGCTAT+TGG + Chr1:68185641-68185660 None:intergenic 35.0%
!! CTGTTCCAACTAATTTTTGG+CGG - Chr1:68182176-68182195 MsG0180003786.01.T01:intron 35.0%
!! GTCTTGTTATTGAATGAGAC+TGG - Chr1:68180221-68180240 MsG0180003786.01.T01:intron 35.0%
!!! AGTACACACGCTCTTTTTTA+GGG + Chr1:68181047-68181066 None:intergenic 35.0%
!!! CCAATAGCTGTTTTAGAATC+TGG - Chr1:68185638-68185657 MsG0180003786.01.T01:CDS 35.0%
!!! CTCTTTTTTAGGGATATCTG+CGG + Chr1:68181037-68181056 None:intergenic 35.0%
AAAACGTCTGATCATGGATG+GGG + Chr1:68184731-68184750 None:intergenic 40.0%
AAACCCATCAGTATCTAGCT+AGG - Chr1:68178902-68178921 MsG0180003786.01.T01:CDS 40.0%
AAACCCTAGCTAGATACTGA+TGG + Chr1:68178909-68178928 None:intergenic 40.0%
AACATGACAGTGACATCACT+AGG + Chr1:68185711-68185730 None:intergenic 40.0%
AACCCAAAACCTTAAGGCAT+TGG - Chr1:68179794-68179813 MsG0180003786.01.T01:intron 40.0%
AACCCATCAGTATCTAGCTA+GGG - Chr1:68178903-68178922 MsG0180003786.01.T01:CDS 40.0%
AACCCTAGCTAGATACTGAT+GGG + Chr1:68178908-68178927 None:intergenic 40.0%
AAGAAGATTAAGGGGAAACG+TGG - Chr1:68179268-68179287 MsG0180003786.01.T01:intron 40.0%
AATACAACTAGGGGATGCAA+GGG + Chr1:68182514-68182533 None:intergenic 40.0%
ACCGCAACATATACACTTTG+TGG + Chr1:68185042-68185061 None:intergenic 40.0%
ACGTGGCAGAAAGAGAAAAA+CGG - Chr1:68179135-68179154 MsG0180003786.01.T01:CDS 40.0%
ACTGTCCGCCAAAAATTAGT+TGG + Chr1:68182184-68182203 None:intergenic 40.0%
AGAAACCAACAATGACCATG+AGG - Chr1:68180596-68180615 MsG0180003786.01.T01:intron 40.0%
AGAACTTCTTATACTGTCCC+AGG - Chr1:68181658-68181677 MsG0180003786.01.T01:CDS 40.0%
AGCAACTAGACAAGTGAGTT+TGG - Chr1:68179759-68179778 MsG0180003786.01.T01:CDS 40.0%
AGCTTCTGAACAAAAGTCCA+GGG + Chr1:68184904-68184923 None:intergenic 40.0%
AGTAAATCACAAGTCTGCAG+AGG - Chr1:68185488-68185507 MsG0180003786.01.T01:intron 40.0%
AGTCCCCATGAATATACTGA+TGG + Chr1:68185131-68185150 None:intergenic 40.0%
ATACCTTCAGATTTCGGACT+TGG + Chr1:68184963-68184982 None:intergenic 40.0%
ATAGGACTTTAACCTTGTGC+TGG + Chr1:68182265-68182284 None:intergenic 40.0%
ATATGAACTCGGCACAATGA+CGG + Chr1:68182805-68182824 None:intergenic 40.0%
ATGAAGCACAGACAAAGAAC+TGG + Chr1:68183426-68183445 None:intergenic 40.0%
ATGCATTGAACAGCAACAGA+TGG - Chr1:68179366-68179385 MsG0180003786.01.T01:intron 40.0%
ATTCAAGATGTACCCAAACC+CGG + Chr1:68184277-68184296 None:intergenic 40.0%
ATTCGTGAATGGTCAAGATC+TGG - Chr1:68181372-68181391 MsG0180003786.01.T01:CDS 40.0%
ATTGCAAGAAGTGAGACTCT+TGG + Chr1:68180732-68180751 None:intergenic 40.0%
ATTGTTCTCTAGCAAGTGAG+AGG + Chr1:68179830-68179849 None:intergenic 40.0%
CAGAAAGAGAAAAACGGAGA+AGG - Chr1:68179141-68179160 MsG0180003786.01.T01:intron 40.0%
CATACACAATAGCACAAGGA+AGG - Chr1:68181611-68181630 MsG0180003786.01.T01:CDS 40.0%
CATGGTGTAACAGCTTACAA+AGG + Chr1:68183144-68183163 None:intergenic 40.0%
CCGCCATGGAAAAATTCAAA+TGG + Chr1:68178994-68179013 None:intergenic 40.0%
CGAGCATAAAAAGAGGCTTA+AGG - Chr1:68184761-68184780 MsG0180003786.01.T01:CDS 40.0%
CGATTTGTGGAAAATGGAAG+TGG - Chr1:68183724-68183743 MsG0180003786.01.T01:CDS 40.0%
CGTCTTGATTCTAAACCACA+AGG - Chr1:68185827-68185846 MsG0180003786.01.T01:CDS 40.0%
CTGACATACACAATAGCACA+AGG - Chr1:68181607-68181626 MsG0180003786.01.T01:CDS 40.0%
CTGCATCTGACATATCACAA+TGG + Chr1:68182988-68183007 None:intergenic 40.0%
GAACTTCTTATACTGTCCCA+GGG - Chr1:68181659-68181678 MsG0180003786.01.T01:CDS 40.0%
GAACTTTCGATATAAGGAGC+CGG - Chr1:68179976-68179995 MsG0180003786.01.T01:intron 40.0%
GAAGTATGCTTCTCAGTTCA+AGG + Chr1:68181464-68181483 None:intergenic 40.0%
GAAGTGAAGCTGGATTCTAA+GGG - Chr1:68183553-68183572 MsG0180003786.01.T01:intron 40.0%
GACAAAATCAAGTGCAACCT+TGG + Chr1:68185412-68185431 None:intergenic 40.0%
GAGAGAGGATGTACCTAAAT+TGG - Chr1:68183855-68183874 MsG0180003786.01.T01:CDS 40.0%
GAGATAGAAGCAAAGAGACA+AGG - Chr1:68180696-68180715 MsG0180003786.01.T01:intron 40.0%
GATGAAAGAACTTCCACTTG+AGG + Chr1:68179893-68179912 None:intergenic 40.0%
GCATAAAAAGAGGCTTAAGG+AGG - Chr1:68184764-68184783 MsG0180003786.01.T01:CDS 40.0%
GCATACCCTGTATTAACAGT+TGG - Chr1:68179618-68179637 MsG0180003786.01.T01:intron 40.0%
GCCACAAAGTGTATATGTTG+CGG - Chr1:68185038-68185057 MsG0180003786.01.T01:intron 40.0%
GCTCCTTATATCGAAAGTTC+AGG + Chr1:68179976-68179995 None:intergenic 40.0%
GCTTGGTATTACGTATCTGA+CGG + Chr1:68181817-68181836 None:intergenic 40.0%
GGATACACATGAGTACTTCT+TGG + Chr1:68184185-68184204 None:intergenic 40.0%
GGATTACTTAACAGATGTGG+AGG - Chr1:68179231-68179250 MsG0180003786.01.T01:intron 40.0%
GGCATGTACTTGAAACTACA+AGG + Chr1:68183176-68183195 None:intergenic 40.0%
GTAAAAGAAATGACAAGGGC+AGG - Chr1:68179558-68179577 MsG0180003786.01.T01:intron 40.0%
GTACCGTCATGACATGAATA+AGG - Chr1:68184482-68184501 MsG0180003786.01.T01:intron 40.0%
GTCCCCATGAATATACTGAT+GGG + Chr1:68185130-68185149 None:intergenic 40.0%
GTTGGGGGAAATTCTTTAGA+CGG - Chr1:68183811-68183830 MsG0180003786.01.T01:CDS 40.0%
TCATATTGCTGAAGTGAAGC+TGG - Chr1:68183543-68183562 MsG0180003786.01.T01:intron 40.0%
TCATGGGGACTGATATTCTT+GGG - Chr1:68185140-68185159 MsG0180003786.01.T01:intron 40.0%
TCCATAAACCCATTGCCTTA+AGG + Chr1:68180126-68180145 None:intergenic 40.0%
TCTGCAGACTTGTGATTTAC+TGG + Chr1:68185489-68185508 None:intergenic 40.0%
TCTTGACCATTCACGAATCT+CGG + Chr1:68181370-68181389 None:intergenic 40.0%
TGAAAGAACTTCCACTTGAG+GGG + Chr1:68179891-68179910 None:intergenic 40.0%
TGAAGAACAAATGGCTGAGA+AGG - Chr1:68180674-68180693 MsG0180003786.01.T01:intron 40.0%
TGAAGTGAAGCTGGATTCTA+AGG - Chr1:68183552-68183571 MsG0180003786.01.T01:intron 40.0%
TGAGAAATTGAGAGACACTG+AGG + Chr1:68182405-68182424 None:intergenic 40.0%
TGATGAAATCAATGCTGCTC+AGG - Chr1:68179327-68179346 MsG0180003786.01.T01:intron 40.0%
TTACTTAACAGATGTGGAGG+AGG - Chr1:68179234-68179253 MsG0180003786.01.T01:intron 40.0%
TTCATGGGGACTGATATTCT+TGG - Chr1:68185139-68185158 MsG0180003786.01.T01:intron 40.0%
TTGATGCTATCTCTCCTTGT+CGG - Chr1:68184100-68184119 MsG0180003786.01.T01:intron 40.0%
TTGCAATTGCAAAGCATGCT+TGG - Chr1:68180453-68180472 MsG0180003786.01.T01:CDS 40.0%
TTGCTCGTATGAAGCCTTTA+TGG + Chr1:68183695-68183714 None:intergenic 40.0%
! AACAACACAGTTGCTTTCAC+AGG - Chr1:68179028-68179047 MsG0180003786.01.T01:intron 40.0%
! AACCCAATGCCTTAAGGTTT+TGG + Chr1:68179800-68179819 None:intergenic 40.0%
! AACTCGGAGATGCAATTTTG+TGG + Chr1:68181486-68181505 None:intergenic 40.0%
! AAGCACTCGCCAATATTTTC+AGG + Chr1:68185438-68185457 None:intergenic 40.0%
! AAGGTATCCTGACTTGAAAG+AGG - Chr1:68180393-68180412 MsG0180003786.01.T01:intron 40.0%
! ACAACACAGTTGCTTTCACA+GGG - Chr1:68179029-68179048 MsG0180003786.01.T01:intron 40.0%
! ACCCAAAACCTTAAGGCATT+GGG - Chr1:68179795-68179814 MsG0180003786.01.T01:intron 40.0%
! ACCCAATGCCTTAAGGTTTT+GGG + Chr1:68179799-68179818 None:intergenic 40.0%
! ACCCATTGCCTTAAGGTTTT+AGG + Chr1:68180119-68180138 None:intergenic 40.0%
! ACCTTAAGGCAATGGGTTTA+TGG - Chr1:68180122-68180141 MsG0180003786.01.T01:intron 40.0%
! AGATGTTTTACAGCCAGACA+TGG - Chr1:68182895-68182914 MsG0180003786.01.T01:intron 40.0%
! AGCATTTTGTACAGCTTCTG+TGG + Chr1:68181179-68181198 None:intergenic 40.0%
! ATGTTGCGGTTGTGAGTTTT+AGG - Chr1:68185052-68185071 MsG0180003786.01.T01:intron 40.0%
! CTAAAAAAGAGCGTGTGTAC+TGG - Chr1:68181046-68181065 MsG0180003786.01.T01:intron 40.0%
! CTGAGATGTTGATTGATGCA+GGG - Chr1:68182656-68182675 MsG0180003786.01.T01:intron 40.0%
! GAGTTTGAGTTTATCTTCCG+AGG - Chr1:68181270-68181289 MsG0180003786.01.T01:intron 40.0%
! GATGTTTTACAGCCAGACAT+GGG - Chr1:68182896-68182915 MsG0180003786.01.T01:intron 40.0%
! GATTATCTGCATGGTGGAAA+TGG - Chr1:68181297-68181316 MsG0180003786.01.T01:CDS 40.0%
! GTGATAATCTGGTTCACTAC+AGG - Chr1:68180557-68180576 MsG0180003786.01.T01:intron 40.0%
! TCTGAGATGTTGATTGATGC+AGG - Chr1:68182655-68182674 MsG0180003786.01.T01:intron 40.0%
! TGGACTTTTGTTCAGAAGCT+GGG - Chr1:68184904-68184923 MsG0180003786.01.T01:intron 40.0%
! TGTTGCTGTTCAATGCATTC+AGG + Chr1:68179364-68179383 None:intergenic 40.0%
! TTTGAATTTTTCCATGGCGG+GGG - Chr1:68178994-68179013 MsG0180003786.01.T01:intron 40.0%
!! AATTAAGCTTCAAGTTGCGG+TGG - Chr1:68181536-68181555 MsG0180003786.01.T01:CDS 40.0%
!! ACCTTAAGGCATTGGGTTTA+AGG - Chr1:68179802-68179821 MsG0180003786.01.T01:intron 40.0%
!! AGAAGCATTTCAGAGAGTTC+AGG - Chr1:68183890-68183909 MsG0180003786.01.T01:CDS 40.0%
!! CAAGGGCAACAAAAAGTACT+TGG + Chr1:68182497-68182516 None:intergenic 40.0%
!! CCTTAAGGCATTGGGTTTAA+GGG - Chr1:68179803-68179822 MsG0180003786.01.T01:intron 40.0%
!! TCATGGTCATTGTTGGTTTC+TGG + Chr1:68180597-68180616 None:intergenic 40.0%
!! TCTTTGGGATGAACATTGCA+GGG - Chr1:68180983-68181002 MsG0180003786.01.T01:intron 40.0%
!!! CAGTACACACGCTCTTTTTT+AGG + Chr1:68181048-68181067 None:intergenic 40.0%
!!! GTTGCTTTTCTCATGCTTCA+TGG - Chr1:68180795-68180814 MsG0180003786.01.T01:intron 40.0%
!!! TCACAATCATCATCGGCTTT+TGG + Chr1:68181432-68181451 None:intergenic 40.0%
AAAGAACTTCCACTTGAGGG+GGG + Chr1:68179889-68179908 None:intergenic 45.0%
AAAGTTCACTCGACAGACGA+AGG - Chr1:68184610-68184629 MsG0180003786.01.T01:CDS 45.0%
AAATCAATGCTGCTCAGGAG+GGG - Chr1:68179332-68179351 MsG0180003786.01.T01:intron 45.0%
AAGAAATGTCCAGGATGCTG+TGG - Chr1:68180427-68180446 MsG0180003786.01.T01:CDS 45.0%
AAGAAGGTGGCAATTGGTGT+CGG - Chr1:68179298-68179317 MsG0180003786.01.T01:intron 45.0%
AAGAGGCTTAAGGAGGAGTA+TGG - Chr1:68184771-68184790 MsG0180003786.01.T01:CDS 45.0%
AAGTTCACTCGACAGACGAA+GGG - Chr1:68184611-68184630 MsG0180003786.01.T01:CDS 45.0%
AATGCACGCCACATGACAAA+CGG + Chr1:68181794-68181813 None:intergenic 45.0%
AATTGTGTGTGTGTCCGACA+AGG + Chr1:68184117-68184136 None:intergenic 45.0%
ACAGAGTTGTGGGTACATAC+TGG - Chr1:68184156-68184175 MsG0180003786.01.T01:CDS 45.0%
ACAGCATCCTGGACATTTCT+TGG + Chr1:68180428-68180447 None:intergenic 45.0%
ACTACAAGGCTAACAGCTCA+TGG + Chr1:68183162-68183181 None:intergenic 45.0%
ACTGATGGGAATCACAGTCT+TGG + Chr1:68185116-68185135 None:intergenic 45.0%
AGAATCTGGGCTTGGCTTAT+TGG - Chr1:68185652-68185671 MsG0180003786.01.T01:CDS 45.0%
AGATTAAGGGGAAACGTGGT+AGG - Chr1:68179272-68179291 MsG0180003786.01.T01:intron 45.0%
AGCAACCACACAAGTGAGTT+TGG - Chr1:68180079-68180098 MsG0180003786.01.T01:intron 45.0%
AGGAAGAAGAAGGTGGCAAT+TGG - Chr1:68179292-68179311 MsG0180003786.01.T01:intron 45.0%
AGTCTCCCACCATAAGTTCA+GGG - Chr1:68184421-68184440 MsG0180003786.01.T01:intron 45.0%
AGTCTGGGGATTGTCTACAT+TGG - Chr1:68180050-68180069 MsG0180003786.01.T01:intron 45.0%
ATGACGTAGATTTACTGCCC+TGG + Chr1:68181679-68181698 None:intergenic 45.0%
ATTCTTTAGACGGTGCTCTC+TGG - Chr1:68183821-68183840 MsG0180003786.01.T01:CDS 45.0%
CAAGTCTGCAGAGGACAAAT+TGG - Chr1:68185497-68185516 MsG0180003786.01.T01:intron 45.0%
CAGCTTCTGAACAAAAGTCC+AGG + Chr1:68184905-68184924 None:intergenic 45.0%
CCCTTAAACCCAATGCCTTA+AGG + Chr1:68179806-68179825 None:intergenic 45.0%
CCTGACTCTGATACCATTGT+CGG - Chr1:68180016-68180035 MsG0180003786.01.T01:intron 45.0%
CGACAATGGTATCAGAGTCA+GGG + Chr1:68180018-68180037 None:intergenic 45.0%
CGGCAAGGAAGATATGAACT+CGG + Chr1:68182816-68182835 None:intergenic 45.0%
CTACATGGTGATAATCGGGA+CGG - Chr1:68183631-68183650 MsG0180003786.01.T01:CDS 45.0%
CTCAACCTCATGGTCATTGT+TGG + Chr1:68180604-68180623 None:intergenic 45.0%
CTGACTCTGATACCATTGTC+GGG - Chr1:68180017-68180036 MsG0180003786.01.T01:intron 45.0%
CTGATGGGAATCACAGTCTT+GGG + Chr1:68185115-68185134 None:intergenic 45.0%
CTTGACCATTCACGAATCTC+GGG + Chr1:68181369-68181388 None:intergenic 45.0%
GAAACGTGGTAGGAAGAAGA+AGG - Chr1:68179282-68179301 MsG0180003786.01.T01:intron 45.0%
GAAAGAACTTCCACTTGAGG+GGG + Chr1:68179890-68179909 None:intergenic 45.0%
GAAATCAATGCTGCTCAGGA+GGG - Chr1:68179331-68179350 MsG0180003786.01.T01:intron 45.0%
GAACTGACCTTGATAAGTGC+AGG + Chr1:68180484-68180503 None:intergenic 45.0%
GAATACAACTAGGGGATGCA+AGG + Chr1:68182515-68182534 None:intergenic 45.0%
GACATTGCCAAGAAATGTCC+AGG - Chr1:68180418-68180437 MsG0180003786.01.T01:intron 45.0%
GACTTGTAGGAATTGAACCC+TGG - Chr1:68184884-68184903 MsG0180003786.01.T01:intron 45.0%
GCATCAACAGAAGCTTCATC+AGG + Chr1:68179094-68179113 None:intergenic 45.0%
GCCGATGATGATTGTGATCA+TGG - Chr1:68181435-68181454 MsG0180003786.01.T01:CDS 45.0%
GGAGCTACATGGTGATAATC+GGG - Chr1:68183627-68183646 MsG0180003786.01.T01:CDS 45.0%
GGCAGTAAATCTACGTCATG+AGG - Chr1:68181680-68181699 MsG0180003786.01.T01:intron 45.0%
GGGAGCTACATGGTGATAAT+CGG - Chr1:68183626-68183645 MsG0180003786.01.T01:CDS 45.0%
GGTATCCAAACTCACTTGTG+TGG + Chr1:68180087-68180106 None:intergenic 45.0%
GTCTGGGGATTGTCTACATT+GGG - Chr1:68180051-68180070 MsG0180003786.01.T01:intron 45.0%
GTGAATGGTCAAGATCTGGA+TGG - Chr1:68181376-68181395 MsG0180003786.01.T01:CDS 45.0%
GTGACTTAGTTAGCACCTTG+TGG + Chr1:68185845-68185864 None:intergenic 45.0%
TACATGACAGTCTTTGGGTC+CGG - Chr1:68184363-68184382 MsG0180003786.01.T01:intron 45.0%
TAGATGGCTAGGAAGACTGA+TGG - Chr1:68184645-68184664 MsG0180003786.01.T01:intron 45.0%
TATGAACTCGGCACAATGAC+GGG + Chr1:68182804-68182823 None:intergenic 45.0%
TCAGAGCTGGTATCTTACCT+GGG - Chr1:68184313-68184332 MsG0180003786.01.T01:intron 45.0%
TCCAACGGTGACTTTGACAA+CGG + Chr1:68179945-68179964 None:intergenic 45.0%
TGAAATCAATGCTGCTCAGG+AGG - Chr1:68179330-68179349 MsG0180003786.01.T01:intron 45.0%
TGAAATGCACGGAATGCAAC+CGG - Chr1:68179585-68179604 MsG0180003786.01.T01:intron 45.0%
TGACGTAGATTTACTGCCCT+GGG + Chr1:68181678-68181697 None:intergenic 45.0%
TGGTACTTACACACGAGTAC+CGG - Chr1:68184255-68184274 MsG0180003786.01.T01:intron 45.0%
TTACAGGTCTGGAGAAACCA+AGG - Chr1:68186296-68186315 MsG0180003786.01.T01:five_prime_UTR 45.0%
TTCAGAGCTGGTATCTTACC+TGG - Chr1:68184312-68184331 MsG0180003786.01.T01:intron 45.0%
TTCTTTAGACGGTGCTCTCT+GGG - Chr1:68183822-68183841 MsG0180003786.01.T01:CDS 45.0%
TTGCAATTACCACAGCATCC+TGG + Chr1:68180439-68180458 None:intergenic 45.0%
TTTCTGCCACGTTTCTTTGC+CGG + Chr1:68179127-68179146 None:intergenic 45.0%
! AAAAGAGCGTGTGTACTGGT+AGG - Chr1:68181050-68181069 MsG0180003786.01.T01:intron 45.0%
! AAAAGGGCGAAAGTGTGAGA+AGG - Chr1:68179170-68179189 MsG0180003786.01.T01:intron 45.0%
! AAAGAGCGTGTGTACTGGTA+GGG - Chr1:68181051-68181070 MsG0180003786.01.T01:intron 45.0%
! ATGGATTTGCTCAGGAGCTT+GGG - Chr1:68182939-68182958 MsG0180003786.01.T01:intron 45.0%
! ATGTCCTCCTCTTTCAAGTC+AGG + Chr1:68180403-68180422 None:intergenic 45.0%
! CAACACAGTTGCTTTCACAG+GGG - Chr1:68179030-68179049 MsG0180003786.01.T01:intron 45.0%
! CTGGACTTTTGTTCAGAAGC+TGG - Chr1:68184903-68184922 MsG0180003786.01.T01:intron 45.0%
! CTTCAGATTTCGGACTTGGT+GGG + Chr1:68184959-68184978 None:intergenic 45.0%
! CTTGGTGCATGACTGCAAAA+CGG + Chr1:68185394-68185413 None:intergenic 45.0%
! GTATCCTGACTTGAAAGAGG+AGG - Chr1:68180396-68180415 MsG0180003786.01.T01:intron 45.0%
! TATGGATTTGCTCAGGAGCT+TGG - Chr1:68182938-68182957 MsG0180003786.01.T01:intron 45.0%
! TCTCACACTTTCGCCCTTTT+CGG + Chr1:68179170-68179189 None:intergenic 45.0%
! TTCAATGGCACTGGAGCAAA+GGG - Chr1:68181715-68181734 MsG0180003786.01.T01:intron 45.0%
! TTTCAATGGCACTGGAGCAA+AGG - Chr1:68181714-68181733 MsG0180003786.01.T01:intron 45.0%
!! AAGATACCAGCTCTGAAGCA+TGG + Chr1:68184309-68184328 None:intergenic 45.0%
!! AGATACCAGCTCTGAAGCAT+GGG + Chr1:68184308-68184327 None:intergenic 45.0%
!! CCATTGCTCTCCTTTAAAGC+AGG - Chr1:68183918-68183937 MsG0180003786.01.T01:CDS 45.0%
!! CCTGCTTTAAAGGAGAGCAA+TGG + Chr1:68183921-68183940 None:intergenic 45.0%
!! GTCTTTGGGATGAACATTGC+AGG - Chr1:68180982-68181001 MsG0180003786.01.T01:intron 45.0%
!! GTGCTCTCTGGGATATCTTT+CGG - Chr1:68183833-68183852 MsG0180003786.01.T01:CDS 45.0%
!! TGATTGCTTGGATTGGTGTG+AGG - Chr1:68181865-68181884 MsG0180003786.01.T01:intron 45.0%
!! TTCAGATTTCGGACTTGGTG+GGG + Chr1:68184958-68184977 None:intergenic 45.0%
!!! ATCATCATCGGCTTTTGGAC+AGG + Chr1:68181427-68181446 None:intergenic 45.0%
!!! GATGCTGTTTTCATTCCAGC+TGG - Chr1:68184928-68184947 MsG0180003786.01.T01:intron 45.0%
!!! GCTGTTTTAGAATCTGGGCT+TGG - Chr1:68185644-68185663 MsG0180003786.01.T01:CDS 45.0%
!!! TATGTTTTTGGGCCCATGTC+TGG + Chr1:68182911-68182930 None:intergenic 45.0%
!!! TCATCATCGGCTTTTGGACA+GGG + Chr1:68181426-68181445 None:intergenic 45.0%
AACAGATGTGGAGGAGGATC+TGG - Chr1:68179240-68179259 MsG0180003786.01.T01:intron 50.0%
AACGGAGAAGGAAGCCGAAA+AGG - Chr1:68179153-68179172 MsG0180003786.01.T01:intron 50.0%
AACGGTGACTTTGACAACGG+CGG + Chr1:68179942-68179961 None:intergenic 50.0%
AAGAACTTCCACTTGAGGGG+GGG + Chr1:68179888-68179907 None:intergenic 50.0%
AAGGGCCTGCTGTATGTAGA+TGG - Chr1:68184629-68184648 MsG0180003786.01.T01:intron 50.0%
AATCAATGCTGCTCAGGAGG+GGG - Chr1:68179333-68179352 MsG0180003786.01.T01:intron 50.0%
ACATGACAGTCTTTGGGTCC+GGG - Chr1:68184364-68184383 MsG0180003786.01.T01:intron 50.0%
ACCATTCACGAATCTCGGGT+TGG + Chr1:68181365-68181384 None:intergenic 50.0%
ACGGAGAAGGAAGCCGAAAA+GGG - Chr1:68179154-68179173 MsG0180003786.01.T01:intron 50.0%
ACGTGGTAGGAAGAAGAAGG+TGG - Chr1:68179285-68179304 MsG0180003786.01.T01:intron 50.0%
ACTTGGAGAGCTCAACCTCA+TGG + Chr1:68180614-68180633 None:intergenic 50.0%
AGACAAAGAACTGGCCAGGA+AGG + Chr1:68183417-68183436 None:intergenic 50.0%
AGACTAGATGGTCTGCTCTC+TGG - Chr1:68182225-68182244 MsG0180003786.01.T01:CDS 50.0%
AGCACCTTGAGCAAGACAAG+AGG - Chr1:68183605-68183624 MsG0180003786.01.T01:CDS 50.0%
AGCAGATCCATTGTCCTTCC+TGG - Chr1:68183400-68183419 MsG0180003786.01.T01:CDS 50.0%
AGCTTCATCAGGAGCAGCTA+TGG + Chr1:68179083-68179102 None:intergenic 50.0%
AGTCTTTGGGTCCGGGATAT+TGG - Chr1:68184371-68184390 MsG0180003786.01.T01:intron 50.0%
ATCAGAGTCAGGGTTCGACA+AGG + Chr1:68180008-68180027 None:intergenic 50.0%
ATGAACTCGGCACAATGACG+GGG + Chr1:68182803-68182822 None:intergenic 50.0%
CAAGACAAGAGGGAGCTACA+TGG - Chr1:68183616-68183635 MsG0180003786.01.T01:CDS 50.0%
CAGTCTCCCACCATAAGTTC+AGG - Chr1:68184420-68184439 MsG0180003786.01.T01:intron 50.0%
CATGAAGAGTGACCAGCACA+AGG - Chr1:68182250-68182269 MsG0180003786.01.T01:CDS 50.0%
CATGCAGATAATCACGCCCT+CGG + Chr1:68181290-68181309 None:intergenic 50.0%
CCACCAAGTCCGAAATCTGA+AGG - Chr1:68184957-68184976 MsG0180003786.01.T01:intron 50.0%
CCATTCACGAATCTCGGGTT+GGG + Chr1:68181364-68181383 None:intergenic 50.0%
CCGACAATGGTATCAGAGTC+AGG + Chr1:68180019-68180038 None:intergenic 50.0%
CCTAGCCATCTACATACAGC+AGG + Chr1:68184637-68184656 None:intergenic 50.0%
CCTGCTGTATGTAGATGGCT+AGG - Chr1:68184634-68184653 MsG0180003786.01.T01:intron 50.0%
CCTTCAGATTTCGGACTTGG+TGG + Chr1:68184960-68184979 None:intergenic 50.0%
CGAGTGCTTTCGTTTGACAG+AGG - Chr1:68185449-68185468 MsG0180003786.01.T01:intron 50.0%
CGGTGGAGACTTCTGATAGT+AGG - Chr1:68181553-68181572 MsG0180003786.01.T01:CDS 50.0%
CTGGGATATCTTTCGGAGAG+AGG - Chr1:68183840-68183859 MsG0180003786.01.T01:CDS 50.0%
GACTAGATGGTCTGCTCTCT+GGG - Chr1:68182226-68182245 MsG0180003786.01.T01:CDS 50.0%
GAGACTGAGTGAATGCAGGT+GGG + Chr1:68184407-68184426 None:intergenic 50.0%
GCAAGAAGTGAGACTCTTGG+AGG + Chr1:68180729-68180748 None:intergenic 50.0%
GCACCTTGAGCAAGACAAGA+GGG - Chr1:68183606-68183625 MsG0180003786.01.T01:CDS 50.0%
GCTTGATCTGGTCGAGAAGT+TGG - Chr1:68186081-68186100 MsG0180003786.01.T01:CDS 50.0%
GGACTCACCTGCACTTATCA+AGG - Chr1:68180474-68180493 MsG0180003786.01.T01:CDS 50.0%
GGTACTTACACACGAGTACC+GGG - Chr1:68184256-68184275 MsG0180003786.01.T01:intron 50.0%
GTCTCCCACCATAAGTTCAG+GGG - Chr1:68184422-68184441 MsG0180003786.01.T01:intron 50.0%
GTCTGCAGAGGACAAATTGG+AGG - Chr1:68185500-68185519 MsG0180003786.01.T01:intron 50.0%
GTTCAGGTCATGGGTTCCAA+CGG + Chr1:68179960-68179979 None:intergenic 50.0%
TACCATTGTCGGGTCATGAG+AGG - Chr1:68180027-68180046 MsG0180003786.01.T01:intron 50.0%
TATCTTGTGTGGGGTCACGA+GGG - Chr1:68179706-68179725 MsG0180003786.01.T01:CDS 50.0%
TCAGAGTCAGGGTTCGACAA+GGG + Chr1:68180007-68180026 None:intergenic 50.0%
TCGAGAAGTTGGAGGAAGCA+AGG - Chr1:68186092-68186111 MsG0180003786.01.T01:CDS 50.0%
TGATCTGGTCGAGAAGTTGG+AGG - Chr1:68186084-68186103 MsG0180003786.01.T01:CDS 50.0%
TGTCGGTGCAACAGAGTTGT+GGG - Chr1:68184146-68184165 MsG0180003786.01.T01:CDS 50.0%
TTATCTTGTGTGGGGTCACG+AGG - Chr1:68179705-68179724 MsG0180003786.01.T01:CDS 50.0%
! AAGAGCGTGTGTACTGGTAG+GGG - Chr1:68181052-68181071 MsG0180003786.01.T01:intron 50.0%
! CGTTTTGCAGTCATGCACCA+AGG - Chr1:68185392-68185411 MsG0180003786.01.T01:intron 50.0%
! CTAGTTGCTCTGAGCCCAAT+GGG + Chr1:68179748-68179767 None:intergenic 50.0%
! TAGTTGCTCTGAGCCCAATG+GGG + Chr1:68179747-68179766 None:intergenic 50.0%
! TCTAGTTGCTCTGAGCCCAA+TGG + Chr1:68179749-68179768 None:intergenic 50.0%
! TGAGACTGGTTCAACAGCTG+AGG - Chr1:68180235-68180254 MsG0180003786.01.T01:CDS 50.0%
!! TACACACGAGTACCGGGTTT+GGG - Chr1:68184262-68184281 MsG0180003786.01.T01:intron 50.0%
!! TTACACACGAGTACCGGGTT+TGG - Chr1:68184261-68184280 MsG0180003786.01.T01:intron 50.0%
AAGGTTGGGCACTCTGTGAG+AGG + Chr1:68180150-68180169 None:intergenic 55.0%
ACCAGCAGCCCCTGAACTTA+TGG + Chr1:68184433-68184452 None:intergenic 55.0%
ACCATAAGTTCAGGGGCTGC+TGG - Chr1:68184429-68184448 MsG0180003786.01.T01:intron 55.0%
ACGTTTCTTTGCCGGAGGAG+CGG + Chr1:68179119-68179138 None:intergenic 55.0%
AGCAGCCCCTGAACTTATGG+TGG + Chr1:68184430-68184449 None:intergenic 55.0%
ATCTTGTGTGGGGTCACGAG+GGG - Chr1:68179707-68179726 MsG0180003786.01.T01:CDS 55.0%
ATTTGCTCAGGAGCTTGGGC+GGG - Chr1:68182943-68182962 MsG0180003786.01.T01:intron 55.0%
CACGAAGCTCGCAGCAACAA+AGG + Chr1:68181218-68181237 None:intergenic 55.0%
CATTTATGCCCCCCCTCAAG+TGG - Chr1:68179877-68179896 MsG0180003786.01.T01:intron 55.0%
CCCAACCCGAGATTCGTGAA+TGG - Chr1:68181361-68181380 MsG0180003786.01.T01:CDS 55.0%
CTCCTCTCATGACCCGACAA+TGG + Chr1:68180032-68180051 None:intergenic 55.0%
CTTTGTTGCTGCGAGCTTCG+TGG - Chr1:68181216-68181235 MsG0180003786.01.T01:intron 55.0%
GAACTGGCCAGGAAGGACAA+TGG + Chr1:68183410-68183429 None:intergenic 55.0%
GAGGCCAATTAAGCCAGTCC+AGG + Chr1:68182727-68182746 None:intergenic 55.0%
GCACAGACAAAGAACTGGCC+AGG + Chr1:68183421-68183440 None:intergenic 55.0%
GCAGCCCCTGAACTTATGGT+GGG + Chr1:68184429-68184448 None:intergenic 55.0%
GCCGTTGTCAAAGTCACCGT+TGG - Chr1:68179941-68179960 MsG0180003786.01.T01:intron 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG + Chr1:68183612-68183631 None:intergenic 55.0%
GCTGGGAACCGTTTGTCATG+TGG - Chr1:68181783-68181802 MsG0180003786.01.T01:intron 55.0%
GGAGACTGAGTGAATGCAGG+TGG + Chr1:68184408-68184427 None:intergenic 55.0%
GGGCAGGGTTGTGAAATGCA+CGG - Chr1:68179574-68179593 MsG0180003786.01.T01:intron 55.0%
GGGCGTGATTATCTGCATGG+TGG - Chr1:68181291-68181310 MsG0180003786.01.T01:CDS 55.0%
GGGTTCGACAAGGGATCAAC+CGG + Chr1:68179998-68180017 None:intergenic 55.0%
GTGGGAGACTGAGTGAATGC+AGG + Chr1:68184411-68184430 None:intergenic 55.0%
TCGGGTCATGAGAGGAGTCT+GGG - Chr1:68180035-68180054 MsG0180003786.01.T01:intron 55.0%
TGAGAAGGAGTGAGCGTGCT+AGG - Chr1:68179185-68179204 MsG0180003786.01.T01:intron 55.0%
! AGTTGCTCTGAGCCCAATGG+GGG + Chr1:68179746-68179765 None:intergenic 55.0%
! CGAGGGCGTGATTATCTGCA+TGG - Chr1:68181288-68181307 MsG0180003786.01.T01:CDS 55.0%
! CTTCGTGGTGGGAAGCTTCT+AGG - Chr1:68181231-68181250 MsG0180003786.01.T01:intron 55.0%
! GACTGGTTCAACAGCTGAGG+AGG - Chr1:68180238-68180257 MsG0180003786.01.T01:CDS 55.0%
! GATTTGCTCAGGAGCTTGGG+CGG - Chr1:68182942-68182961 MsG0180003786.01.T01:intron 55.0%
! GGATGGCTTGCAGACAGTGA+TGG - Chr1:68181393-68181412 MsG0180003786.01.T01:CDS 55.0%
! GTGTCGGTGCAACAGAGTTG+TGG - Chr1:68184145-68184164 MsG0180003786.01.T01:intron 55.0%
!! CTCGCCTGGACTGGCTTAAT+TGG - Chr1:68182720-68182739 MsG0180003786.01.T01:intron 55.0%
!! GGACTGGCTTAATTGGCCTC+AGG - Chr1:68182727-68182746 MsG0180003786.01.T01:intron 55.0%
ACACAAAGGCTCGCCTGGAC+TGG - Chr1:68182711-68182730 MsG0180003786.01.T01:intron 60.0%
CGGGTCATGAGAGGAGTCTG+GGG - Chr1:68180036-68180055 MsG0180003786.01.T01:intron 60.0%
CTGAGCTGGAGATAGAGCCC+AGG + Chr1:68184333-68184352 None:intergenic 60.0%
CTGCCACGTTTCTTTGCCGG+AGG + Chr1:68179124-68179143 None:intergenic 60.0%
GCTCCTCCGGCAAAGAAACG+TGG - Chr1:68179118-68179137 MsG0180003786.01.T01:CDS 60.0%
GGAGTCCCATGCTTCAGAGC+TGG - Chr1:68184300-68184319 MsG0180003786.01.T01:intron 60.0%
GTCGGGTCATGAGAGGAGTC+TGG - Chr1:68180034-68180053 MsG0180003786.01.T01:intron 60.0%
GTTGCTGCGAGCTTCGTGGT+GGG - Chr1:68181220-68181239 MsG0180003786.01.T01:intron 60.0%
GTTGTTGTCTTCCCCCGCCA+TGG + Chr1:68179008-68179027 None:intergenic 60.0%
TGGGTACACAAAGGCTCGCC+TGG - Chr1:68182706-68182725 MsG0180003786.01.T01:intron 60.0%
TGTTGATGCTGCCGCTCCTC+CGG - Chr1:68179105-68179124 MsG0180003786.01.T01:CDS 60.0%
TGTTGCTGCGAGCTTCGTGG+TGG - Chr1:68181219-68181238 MsG0180003786.01.T01:intron 60.0%
TTTGCTCAGGAGCTTGGGCG+GGG - Chr1:68182944-68182963 MsG0180003786.01.T01:intron 60.0%
! ACTTGGTGGGGACAACCAGC+TGG + Chr1:68184946-68184965 None:intergenic 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG - Chr1:68181234-68181253 MsG0180003786.01.T01:intron 60.0%
AGCCTTGGGACCACCCCCAT+TGG - Chr1:68179730-68179749 MsG0180003786.01.T01:CDS 65.0%
GCCTTGGGACCACCCCCATT+GGG - Chr1:68179731-68179750 MsG0180003786.01.T01:CDS 65.0%
! TGCTCTGAGCCCAATGGGGG+TGG + Chr1:68179743-68179762 None:intergenic 65.0%
GCCCAATGGGGGTGGTCCCA+AGG + Chr1:68179735-68179754 None:intergenic 70.0%
GGGGTCACGAGGGGAGCCTT+GGG - Chr1:68179716-68179735 MsG0180003786.01.T01:CDS 70.0%
TGGGGTCACGAGGGGAGCCT+TGG - Chr1:68179715-68179734 MsG0180003786.01.T01:CDS 70.0%
!! TCGGGTTGGGCAGCAGCACG+AGG + Chr1:68181351-68181370 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 68178884 68186329 68178884 ID=MsG0180003786.01;Name=MsG0180003786.01
Chr1 mRNA 68178884 68186329 68178884 ID=MsG0180003786.01.T01;Parent=MsG0180003786.01;Name=MsG0180003786.01.T01;_AED=0.33;_eAED=0.35;_QI=123|0.84|0.71|1|0.84|0.85|14|0|875
Chr1 exon 68178884 68178965 68178884 ID=MsG0180003786.01.T01:exon:5831;Parent=MsG0180003786.01.T01
Chr1 exon 68179073 68179158 68179073 ID=MsG0180003786.01.T01:exon:5830;Parent=MsG0180003786.01.T01
Chr1 exon 68179692 68179811 68179692 ID=MsG0180003786.01.T01:exon:5829;Parent=MsG0180003786.01.T01
Chr1 exon 68180235 68180320 68180235 ID=MsG0180003786.01.T01:exon:5828;Parent=MsG0180003786.01.T01
Chr1 exon 68180421 68180493 68180421 ID=MsG0180003786.01.T01:exon:5827;Parent=MsG0180003786.01.T01
Chr1 exon 68181274 68181684 68181274 ID=MsG0180003786.01.T01:exon:5826;Parent=MsG0180003786.01.T01
Chr1 exon 68182207 68182536 68182207 ID=MsG0180003786.01.T01:exon:5825;Parent=MsG0180003786.01.T01
Chr1 exon 68183327 68183436 68183327 ID=MsG0180003786.01.T01:exon:5824;Parent=MsG0180003786.01.T01
Chr1 exon 68183559 68184067 68183559 ID=MsG0180003786.01.T01:exon:5823;Parent=MsG0180003786.01.T01
Chr1 exon 68184146 68184209 68184146 ID=MsG0180003786.01.T01:exon:5822;Parent=MsG0180003786.01.T01
Chr1 exon 68184496 68184634 68184496 ID=MsG0180003786.01.T01:exon:5821;Parent=MsG0180003786.01.T01
Chr1 exon 68184718 68184817 68184718 ID=MsG0180003786.01.T01:exon:5820;Parent=MsG0180003786.01.T01
Chr1 exon 68185574 68185710 68185574 ID=MsG0180003786.01.T01:exon:5819;Parent=MsG0180003786.01.T01
Chr1 exon 68185826 68186329 68185826 ID=MsG0180003786.01.T01:exon:5818;Parent=MsG0180003786.01.T01
Chr1 five_prime_UTR 68186207 68186329 68186207 ID=MsG0180003786.01.T01:five_prime_utr;Parent=MsG0180003786.01.T01
Chr1 CDS 68185826 68186206 68185826 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68185574 68185710 68185574 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68184718 68184817 68184718 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68184496 68184634 68184496 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68184146 68184209 68184146 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68183559 68184067 68183559 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68183327 68183436 68183327 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68182207 68182536 68182207 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68181274 68181684 68181274 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68180421 68180493 68180421 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68180235 68180320 68180235 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68179692 68179811 68179692 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68179073 68179158 68179073 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Chr1 CDS 68178884 68178965 68178884 ID=MsG0180003786.01.T01:cds;Parent=MsG0180003786.01.T01
Gene Sequence

>MsG0180003786.01.T01

ATGGCGGGGGAAGACAACAACAACAACACAGTTGCTTTCACAGGGGAAGAATCCATTCCTGATAATCAAGAAACCATAGCTGCTCCTGATGAAGCTTCTGTTGATGCTGCCGCTCCTCCGGCAAAGAAACGTGGCAGAAAGAGAAAAACGGAGAAGGAAGCCGAAAAGGGCGAAAGTGTGAGAAGGAGTGAGCGTGCTAGGAAGAATAGTAGATCGTTGAATGAGGATTACTTAACAGATGTGGAGGAGGATCTGGAACTGAAGAAGATTAAGGGGAAACGTGGTAGGAAGAAGAAGGTGGCAATTGGTGTCGGTGTTTCTGATGAAATCAATGCTGCTCAGGAGGGGGAGAAACCTGAATGCATTGAACAGCAACAGATGGGGATTGAAGATGTGTCCTTATTGGTCTGTAATAAGGACACTAATTGCCATCAATGTAAAAGAAATGACAAGGGCAGGGTTGTGAAATGCACGGAATGCAACCGGAAGAAATTTTGCATACCCTGTATTAACAGTTGGTATCCTGACTTGAAAGAGGAGGACATTGCCAAGAAATGTCCAGGATGCTGTGGTAATTGCAATTGCAAAGCATGCTTGGACTCACCTGCACTTATCAAGGCAATTAAAGAGAAGCCAGAAACCAACAATGACCATGAGGTTGAGCTCTCCAAGTATATGCTGAAAATACTTCTTCCGTATTTAAGACGATTGGATGAAGAACAAATGGCTGAGAAGGAGATAGAAGCAAAGAGACAAGGGATCTCACGTTCTGAGCTAAAAATAAAAGCCGCAGATATCCCTAAAAAAGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACATTTGTCTCCTTTGTTGCTGCGAGCTTCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATCGAGTTTGAGTTTATCTTCCGAGGGCGTGATTATCTGCATGGTGGAAATGGTAATGAAGAGAGAGTAAATGAAAGTGAACCTCGTGCTGCTGCCCAACCCGAGATTCGTGAATGGTCAAGATCTGGATGGCTTGCAGACAGTGATGGTAGCATTCCCTGTCCAAAAGCCGATGATGATTGTGATCATGGTTTCCTTGAACTGAGAAGCATACTTCCACAAAATTGCATCTCCGAGTTAGTATGTAAAGCAAAAGAACATGAAGAAACAATTAAGCTTCAAGTTGCGGTGGAGACTTCTGATAGTAGGTGTTCTTGTTTGAAGCCTGTTTTGAATGCATCTGACATACACAATAGCACAAGGAAGGCAGCTTCTCGTGAAGATTCCAGTTTAAGCTGGGAACCGTTTGTCATGTGGCGTGCATTCCGTCAGATACGTAATACCAAGCAAAAAACACTTTTGGATGTGAAAACTATTGATTGCTTGGATTGGTGTGAGGGAGATCTTAATTTGCACCAATTCTTTACTGGGTACACAAAGGCTCGCCTGGACTGGCTTAATTGGCCTCAGGTTTTGAAACTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGTTTGCCCCGTCATTGTGCCGAGTTCATATCTTCCTTGCCGTTCAAAGAATATACAGATCCTTTCAATGGTGTTCTAAACCTTGCTGTGAAGTTGCCTAAAGATGTTTTACAGCCAGACATGGGCCCAAAAACATATATTGCTTATGGATTTGCTCAGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCATTGTGATATGTCAGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAGCTGGATTCTAAGGGCATTAATGCCATTAAAAAACTGACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCGGGACGGAGAGCCCAAGATTGACATGCTTGATAATTCATCTTCTTCCATAAAGGCTTCATACGAGCAAAATAGTGTTCGATTTGTGGAAAATGGAAGTGGAATATGTGATGAAAAGGTGGTTGATCCAGAGCTCAAAGAAGTTGATAAAGAAAATAGTTTATTGGTTGGGGGAAATTCTTTAGACGGTGCTCTCTGGGATATCTTTCGGAGAGAGGATGTACCTAAATTGGAAGAATATTTAAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTCTCCTTTAAAGCAGGTTGTTCACCCCATCCATGATCAGACGTTTTATTTGACTATCGAGCATAAAAAGAGGCTTAAGGAGGAGTATGGAATTGAACCCTGGACTTTTGTTCAGAAGCTGGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCCGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATATTGGCGAGTGCTTTCGTTTGACAGAGGAATTCCGCAAACTTCCAGTAAATCACAAGTCTGCAGAGGACAAATTGGAGGTGAAGAAAATGATTATGTATGCTATGCTTGATCTGGTCGAGAAGTTGGAGGAAGCAAGGTTAGTGATTGCAAACTTTAGGCCTATGCTCACGGTTCGTCTGTTATATCATGAAATTGATGTCTGTCATTCAATTTACAGGTCTGGAGAAACCAAGGTTCCTATGTAA

Protein sequence

>MsG0180003786.01.T01

MAGEDNNNNTVAFTGEESIPDNQETIAAPDEASVDAAAPPAKKRGRKRKTEKEAEKGESVRRSERARKNSRSLNEDYLTDVEEDLELKKIKGKRGRKKKVAIGVGVSDEINAAQEGEKPECIEQQQMGIEDVSLLVCNKDTNCHQCKRNDKGRVVKCTECNRKKFCIPCINSWYPDLKEEDIAKKCPGCCGNCNCKACLDSPALIKAIKEKPETNNDHEVELSKYMLKILLPYLRRLDEEQMAEKEIEAKRQGISRSELKIKAADIPKKERVYCDNCKTSIFDYHRSCTKCSFDICLLCCCELRGGKLLGGADPIEFEFIFRGRDYLHGGNGNEERVNESEPRAAAQPEIREWSRSGWLADSDGSIPCPKADDDCDHGFLELRSILPQNCISELVCKAKEHEETIKLQVAVETSDSRCSCLKPVLNASDIHNSTRKAASREDSSLSWEPFVMWRAFRQIRNTKQKTLLDVKTIDCLDWCEGDLNLHQFFTGYTKARLDWLNWPQVLKLKDWPPSNLFEESLPRHCAEFISSLPFKEYTDPFNGVLNLAVKLPKDVLQPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSKGINAIKKLTQKHLEQDKRELHGDNRDGEPKIDMLDNSSSSIKASYEQNSVRFVENGSGICDEKVVDPELKEVDKENSLLVGGNSLDGALWDIFRREDVPKLEEYLKKHFREFRHVHCSPLKQVVHPIHDQTFYLTIEHKKRLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENIGECFRLTEEFRKLPVNHKSAEDKLEVKKMIMYAMLDLVEKLEEARLVIANFRPMLTVRLLYHEIDVCHSIYRSGETKVPM*