AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040529.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040529.01.T01 MTR_7g092200 73.628 565 41 5 1 457 67 631 0.0 771
MsG0780040529.01.T01 MTR_5g013820 31.308 428 228 10 84 457 486 901 5.70e-50 184
MsG0780040529.01.T01 MTR_5g013820 31.308 428 228 10 84 457 486 901 6.51e-50 184
MsG0780040529.01.T01 MTR_1g040155 35.918 245 135 6 77 309 442 676 4.03e-35 140
MsG0780040529.01.T01 MTR_1g040155 39.744 156 93 1 314 468 742 897 1.03e-30 126
MsG0780040529.01.T01 MTR_7g034575 27.660 423 192 10 77 437 909 1279 2.16e-28 120
MsG0780040529.01.T01 MTR_3g064190 33.094 278 125 12 236 453 546 822 5.37e-25 109
MsG0780040529.01.T01 MTR_5g076300 30.904 343 162 14 179 453 507 842 1.17e-23 105
MsG0780040529.01.T01 MTR_8g020390 32.364 275 125 10 227 443 468 739 1.23e-23 105
MsG0780040529.01.T01 MTR_8g020390 32.841 271 121 10 227 439 756 1023 2.56e-23 104
MsG0780040529.01.T01 MTR_8g020390 33.457 269 117 10 230 439 975 1240 4.39e-23 103
MsG0780040529.01.T01 MTR_5g076440 33.916 286 124 13 229 453 551 832 5.24e-23 103
MsG0780040529.01.T01 MTR_3g064210 31.562 320 142 12 197 447 583 894 1.05e-22 102
MsG0780040529.01.T01 MTR_5g076310 32.180 289 132 12 227 453 513 799 2.14e-22 101
MsG0780040529.01.T01 MTR_5g076330 31.469 286 134 9 228 453 534 817 2.41e-22 101
MsG0780040529.01.T01 MTR_5g053930 28.571 392 183 12 119 443 368 729 9.11e-22 99.4
MsG0780040529.01.T01 MTR_5g076380 31.801 261 122 10 249 453 561 821 3.98e-21 97.4
MsG0780040529.01.T01 MTR_3g436400 30.070 286 137 9 207 431 527 810 1.17e-20 96.3
MsG0780040529.01.T01 MTR_0189s0030 28.214 280 141 7 224 445 526 803 2.50e-20 95.5
MsG0780040529.01.T01 MTR_2g049990 35.915 142 78 5 321 453 411 548 6.49e-15 77.8
MsG0780040529.01.T01 MTR_5g006890 35.915 142 78 5 321 453 411 548 7.21e-15 77.8
MsG0780040529.01.T01 MTR_1g052700 28.395 243 115 6 257 443 44 283 7.54e-15 75.9
MsG0780040529.01.T01 MTR_2g049990 35.915 142 78 5 321 453 670 807 9.05e-15 77.8
MsG0780040529.01.T01 MTR_5g006890 35.915 142 78 5 321 453 670 807 9.21e-15 77.4
MsG0780040529.01.T01 MTR_2g105760 31.765 170 88 4 292 446 1897 2053 7.99e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040529.01.T01 AT2G03270 64.134 566 94 6 1 457 61 626 0.0 656
MsG0780040529.01.T01 AT5G47010 31.881 436 230 11 76 457 491 913 1.41e-50 186
MsG0780040529.01.T01 AT1G08840 27.755 490 228 13 35 462 861 1286 1.18e-35 142
MsG0780040529.01.T01 AT1G08840 27.755 490 228 13 35 462 880 1305 1.51e-35 141
MsG0780040529.01.T01 AT1G08840 27.755 490 228 13 35 462 893 1318 1.79e-35 141
MsG0780040529.01.T01 AT1G08840 27.755 490 228 13 35 462 896 1321 1.84e-35 141
MsG0780040529.01.T01 AT5G35970 36.709 237 138 5 76 305 489 720 1.58e-32 132
MsG0780040529.01.T01 AT5G35970 40.667 150 89 0 314 463 790 939 3.02e-30 125
MsG0780040529.01.T01 AT4G15570 31.540 409 168 15 119 454 287 656 6.91e-32 130
MsG0780040529.01.T01 AT4G15570 31.540 409 168 15 119 454 287 656 6.91e-32 130
MsG0780040529.01.T01 AT4G15570 31.540 409 168 15 119 454 376 745 1.21e-31 129
MsG0780040529.01.T01 AT4G15570 31.540 409 168 15 119 454 376 745 1.21e-31 129
MsG0780040529.01.T01 AT1G16800 29.577 355 155 11 186 446 1512 1865 3.89e-28 119
MsG0780040529.01.T01 AT1G16800 29.577 355 155 11 186 446 1554 1907 4.01e-28 119
MsG0780040529.01.T01 AT1G16800 29.577 355 155 11 186 446 1624 1977 4.51e-28 119
MsG0780040529.01.T01 AT4G30100 35.094 265 114 13 230 437 918 1181 5.01e-22 100
MsG0780040529.01.T01 AT4G30100 35.094 265 114 13 230 437 918 1181 5.01e-22 100
MsG0780040529.01.T01 AT5G37150 31.522 276 131 12 224 442 503 777 1.46e-21 99.0
MsG0780040529.01.T01 AT4G05540 31.010 287 135 14 221 447 404 687 3.12e-21 97.4
MsG0780040529.01.T01 AT5G52090 31.047 277 133 12 224 443 340 615 4.66e-21 97.1
MsG0780040529.01.T01 AT5G37030 27.295 414 210 14 90 447 226 604 6.00e-21 96.7
MsG0780040529.01.T01 AT5G37140 32.014 278 128 14 221 442 358 630 2.25e-20 95.1
MsG0780040529.01.T01 AT5G37165 27.972 286 140 11 224 447 89 370 1.57e-18 88.2
MsG0780040529.01.T01 AT2G19120 46.602 103 45 3 341 437 920 1018 9.62e-15 77.8
MsG0780040529.01.T01 AT1G65780 45.652 92 43 2 358 443 728 818 3.34e-14 75.9
MsG0780040529.01.T01 AT1G65810 41.000 100 55 3 359 454 716 815 1.32e-13 73.9
MsG0780040529.01.T01 AT1G65810 41.000 100 55 3 359 454 716 815 1.33e-13 73.9
MsG0780040529.01.T01 AT1G65810 41.000 100 55 3 359 454 716 815 1.36e-13 73.9
MsG0780040529.01.T01 AT1G05460 34.752 141 81 4 321 453 672 809 1.40e-12 70.9
MsG0780040529.01.T01 AT1G05460 34.752 141 81 4 321 453 672 809 2.18e-12 70.1

Find 94 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAGATTCACCTTCATTA+AGG 0.195895 7:+78819673 None:intergenic
AAACTCAACAAGGCTGATTT+AGG 0.211297 7:-78824550 MsG0780040529.01.T01:CDS
GGACTGTTTAAACCATCTTC+TGG 0.305390 7:+78824342 None:intergenic
GATTTAGGTTCTCCTGCTCT+TGG 0.314527 7:-78824535 MsG0780040529.01.T01:CDS
AGGTGTAGTTTACAGATTAA+AGG 0.323435 7:-78824509 MsG0780040529.01.T01:intron
TCGAACCATTGATATAATAA+TGG 0.339172 7:+78819359 None:intergenic
ACAGCAACCTTAACAACCTT+TGG 0.342411 7:+78819022 None:intergenic
TTCTATACCTGGGCAGCATA+TGG 0.354013 7:+78819582 None:intergenic
CTCAACAGTTGATGGTTTCC+AGG 0.358877 7:-78819397 MsG0780040529.01.T01:CDS
TTCAGATTCACCTTCATTAA+GGG 0.364033 7:+78819674 None:intergenic
GGGGTGCTTCCTTCTGATAT+TGG 0.372398 7:-78819615 MsG0780040529.01.T01:CDS
TAATATTAACTACTCTGATT+GGG 0.380235 7:-78821052 MsG0780040529.01.T01:CDS
ATTGAAATCTCAACAGTTGA+TGG 0.389005 7:-78819405 MsG0780040529.01.T01:CDS
TTCTTGCTACATGGACCTCC+TGG 0.393897 7:-78822847 MsG0780040529.01.T01:CDS
AAAATTCCCAAAGGTTGTTA+AGG 0.396559 7:-78819029 MsG0780040529.01.T01:CDS
ATTCTTCGACGATAGGGCTT+TGG 0.402780 7:+78822873 None:intergenic
ATTTAGGTTCTCCTGCTCTT+GGG 0.407691 7:-78824534 MsG0780040529.01.T01:CDS
TTTGATGATATTCCAGAAGA+TGG 0.412965 7:-78824354 MsG0780040529.01.T01:CDS
GGTACAAGATGTATACTTGC+AGG 0.415286 7:-78820500 MsG0780040529.01.T01:CDS
CAGCAACCTTAACAACCTTT+GGG 0.426273 7:+78819023 None:intergenic
TGATTGTGTCAGATGTGATA+TGG 0.428874 7:-78819724 MsG0780040529.01.T01:intron
GGTTCTCCTGCTCTTGGGCA+AGG 0.430385 7:-78824529 MsG0780040529.01.T01:CDS
AGTATTGCCAAGTTTCTTAG+AGG 0.430411 7:+78821025 None:intergenic
TCTATACCTGGGCAGCATAT+GGG 0.432716 7:+78819583 None:intergenic
TGAAAGACTTGCAGACTGTA+TGG 0.433914 7:-78820405 MsG0780040529.01.T01:CDS
TGCCTATTCATTCTGGTACT+CGG 0.437190 7:+78819051 None:intergenic
CTACATGGACCTCCTGGAAC+GGG 0.440143 7:-78822841 MsG0780040529.01.T01:CDS
GGAAGCCATTATTATATCAA+TGG 0.442437 7:-78819364 MsG0780040529.01.T01:CDS
GCTTCAACACTTTGAATCGT+TGG 0.445524 7:+78820458 None:intergenic
GTAATATTAACTACTCTGAT+TGG 0.447689 7:-78821053 MsG0780040529.01.T01:CDS
TATCCAGAGAAGAGCGGAAA+AGG 0.461437 7:-78821115 MsG0780040529.01.T01:CDS
TGGCTTCCTTCTCTCTTCCC+TGG 0.465068 7:+78819379 None:intergenic
CACTCATTTACCTTGTGAGC+AGG 0.466716 7:+78824766 None:intergenic
GGGAGATACAGAAGGAACTT+AGG 0.481338 7:-78821142 MsG0780040529.01.T01:CDS
TAAGTTGATGCATACGGTAC+TGG 0.485752 7:+78820356 None:intergenic
CAGTCTGCAAGTCTTTCAAA+GGG 0.487104 7:+78820410 None:intergenic
CGAAGCTGCTCAAGCACTTG+AGG 0.488326 7:-78820979 MsG0780040529.01.T01:CDS
TTTAAACAGTCCCCTAAGGC+TGG 0.503315 7:-78824331 MsG0780040529.01.T01:CDS
AGAGTTAAGCTGGTGAGGAT+TGG 0.508519 7:-78821613 MsG0780040529.01.T01:CDS
GAAGCTGAGAAGAAAGGCTT+AGG 0.510369 7:-78820440 MsG0780040529.01.T01:CDS
GTGGTCTCGCAAATGACATT+CGG 0.510543 7:-78821440 MsG0780040529.01.T01:CDS
GCAAAGCGATTGGTGCAAAG+TGG 0.512365 7:-78819636 MsG0780040529.01.T01:CDS
GAAAACATTCTTCGACGATA+GGG 0.516250 7:+78822867 None:intergenic
GGGGCTTCCTCTAAGAAACT+TGG 0.520260 7:-78821032 MsG0780040529.01.T01:CDS
TTTACAATTTAGGTACTTCG+AGG 0.523785 7:-78821471 MsG0780040529.01.T01:intron
TGACATTCGGAAAGAAATGA+AGG 0.529523 7:-78821427 MsG0780040529.01.T01:intron
TATTACCCCATATGCTGCCC+AGG 0.533415 7:-78819589 MsG0780040529.01.T01:intron
CTATACCTGGGCAGCATATG+GGG 0.533542 7:+78819584 None:intergenic
TCAAGTGGTGGACAGTGCAC+TGG 0.533808 7:-78821569 MsG0780040529.01.T01:CDS
TTGTCTTCTTGCACGTGTCA+CGG 0.534246 7:+78819170 None:intergenic
ACAGTCTGCAAGTCTTTCAA+AGG 0.538378 7:+78820409 None:intergenic
TGCACGTTTATTGCCTCAAG+TGG 0.543086 7:-78821584 MsG0780040529.01.T01:CDS
AGTGTTGAAGCTGAGAAGAA+AGG 0.547783 7:-78820446 MsG0780040529.01.T01:CDS
AGAAAACATTCTTCGACGAT+AGG 0.548538 7:+78822866 None:intergenic
TCATTAGAGTTAAGCTGGTG+AGG 0.549595 7:-78821618 MsG0780040529.01.T01:intron
AATATTAACTACTCTGATTG+GGG 0.550672 7:-78821051 MsG0780040529.01.T01:CDS
TCAACACTTTGAATCGTTGG+AGG 0.552861 7:+78820461 None:intergenic
ATCCGAGTACCAGAATGAAT+AGG 0.559558 7:-78819053 MsG0780040529.01.T01:CDS
GCTACATGGACCTCCTGGAA+CGG 0.561064 7:-78822842 MsG0780040529.01.T01:CDS
GAAGATAGCACCCTTAATGA+AGG 0.561749 7:-78819684 MsG0780040529.01.T01:CDS
TGGTTTCCAGGGAAGAGAGA+AGG 0.569802 7:-78819385 MsG0780040529.01.T01:CDS
ACTACACCTTGCCCAAGAGC+AGG 0.570086 7:+78824523 None:intergenic
AAGCACTTGAGGTTGCATGC+TGG 0.573130 7:-78820968 MsG0780040529.01.T01:CDS
AGATGTGCTTCCTGCTCACA+AGG 0.573998 7:-78824776 MsG0780040529.01.T01:intron
GTTGTCAACAGCAATATTTG+AGG 0.574432 7:+78822747 None:intergenic
TCAACAGTTGATGGTTTCCA+GGG 0.576548 7:-78819396 MsG0780040529.01.T01:CDS
CAAAGCGATTGGTGCAAAGT+GGG 0.579114 7:-78819635 MsG0780040529.01.T01:CDS
ACTGAGACAGTCAGTAGTGA+TGG 0.583432 7:-78819129 MsG0780040529.01.T01:CDS
ACGTTTATTGCCTCAAGTGG+TGG 0.584581 7:-78821581 MsG0780040529.01.T01:CDS
AGGTGAATCTGAAGTTGCTA+TGG 0.584771 7:-78819664 MsG0780040529.01.T01:CDS
GTAATAATTCCAATATCAGA+AGG 0.592246 7:+78819606 None:intergenic
TCACGGCCACATTCATTCGC+CGG 0.592579 7:+78819187 None:intergenic
ACTTGAGGCAATAAACGTGC+AGG 0.593915 7:+78821586 None:intergenic
ATGGTTTAAACAGTCCCCTA+AGG 0.596876 7:-78824335 MsG0780040529.01.T01:CDS
TATGGCTCATGCAAAGCGAT+TGG 0.598071 7:-78819646 MsG0780040529.01.T01:CDS
GGACAGTGCACTGGATGCCC+AGG 0.601569 7:-78821560 MsG0780040529.01.T01:intron
TGGGCTTTCTGAGTGATCGC+CGG 0.608515 7:-78819206 MsG0780040529.01.T01:CDS
TCGTTGGAGGAAGTTGAAGA+TGG 0.608721 7:+78820474 None:intergenic
GTACTTCGAGGAGATAATAG+TGG 0.611245 7:-78821459 MsG0780040529.01.T01:CDS
AGTGCACTGTCCACCACTTG+AGG 0.617324 7:+78821571 None:intergenic
GTAGTGATGGATTTCTAAAG+CGG 0.625610 7:-78819116 MsG0780040529.01.T01:CDS
AAACAAGGAGAACTCACTGA+AGG 0.636587 7:-78819430 MsG0780040529.01.T01:CDS
TGATCGCCGGCGAATGAATG+TGG 0.638117 7:-78819193 MsG0780040529.01.T01:CDS
TACAAGGAGGGAGATACAGA+AGG 0.638444 7:-78821150 MsG0780040529.01.T01:CDS
ATCAACATTACCTTCAGCAG+AGG 0.639923 7:+78820942 None:intergenic
GTAAAATAGTTATACCTGTG+TGG 0.650990 7:+78822706 None:intergenic
CTGTTGACAACATCGTTGAG+CGG 0.655801 7:-78822735 MsG0780040529.01.T01:CDS
TGAATAGGCAAAATTCCCAA+AGG 0.662098 7:-78819038 MsG0780040529.01.T01:CDS
GGACTCTATCCAGAGAAGAG+CGG 0.669587 7:-78821121 MsG0780040529.01.T01:CDS
ATGCTGGATACCTCTGCTGA+AGG 0.673645 7:-78820952 MsG0780040529.01.T01:intron
TTGAGCGGCTAGTTCCACAC+AGG 0.718510 7:-78822720 MsG0780040529.01.T01:intron
AGTCTGCAAGTCTTTCAAAG+GGG 0.731752 7:+78820411 None:intergenic
AAAGCGATTGGTGCAAAGTG+GGG 0.741815 7:-78819634 MsG0780040529.01.T01:CDS
ATATTACAAGAAGTGAAACG+TGG 0.747337 7:-78822793 MsG0780040529.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGATAAAAAAGATATTAA+TGG + Chr7:78820317-78820336 None:intergenic 10.0%
!! TTTGATTATAATGAATTAAA+TGG - Chr7:78823292-78823311 MsG0780040529.01.T01:intron 10.0%
!! ATAAAACATAAAACTAACAA+AGG + Chr7:78822991-78823010 None:intergenic 15.0%
!! GTAGTTATTAATTATGTAAT+AGG - Chr7:78821477-78821496 MsG0780040529.01.T01:intron 15.0%
!! TATTAAAACACTCAAAATTA+CGG - Chr7:78820657-78820676 MsG0780040529.01.T01:intron 15.0%
!! TGATAAAATTCATTTAATCT+AGG + Chr7:78820521-78820540 None:intergenic 15.0%
!! TTGATTTAATTCATTGAAAA+TGG + Chr7:78819189-78819208 None:intergenic 15.0%
!!! TTTTTAATTTGCTTCATATA+GGG - Chr7:78824536-78824555 MsG0780040529.01.T01:CDS 15.0%
!!! TTTTTTAATTTGCTTCATAT+AGG - Chr7:78824535-78824554 MsG0780040529.01.T01:CDS 15.0%
!!! TTTTTTTTTTAGGTATTGAA+TGG - Chr7:78822631-78822650 MsG0780040529.01.T01:intron 15.0%
!! AAAATTCTTAGCTGATTAAT+AGG + Chr7:78820618-78820637 None:intergenic 20.0%
!! AAACCAAAGAAAAAAATACA+AGG - Chr7:78822665-78822684 MsG0780040529.01.T01:intron 20.0%
!! AAATTCAGAGAAATTCAATA+TGG + Chr7:78822343-78822362 None:intergenic 20.0%
!! AATATCATACTTAACTGAAT+TGG - Chr7:78823116-78823135 MsG0780040529.01.T01:intron 20.0%
!! ATTATAATCAAAGAGACATT+TGG + Chr7:78823284-78823303 None:intergenic 20.0%
!! CAAGTTAAATTAATATCCAA+AGG + Chr7:78819412-78819431 None:intergenic 20.0%
!! GATTATAATGAATTAAATGG+AGG - Chr7:78823295-78823314 MsG0780040529.01.T01:intron 20.0%
!! GTGTTATATAATTTCTTTCT+TGG - Chr7:78820031-78820050 MsG0780040529.01.T01:intron 20.0%
!! TAATATTAACTACTCTGATT+GGG - Chr7:78822779-78822798 MsG0780040529.01.T01:CDS 20.0%
!! TTGTTGGATATTATTATTAG+TGG + Chr7:78823044-78823063 None:intergenic 20.0%
!! TTTCTCTGAATTTACAATTT+AGG - Chr7:78822350-78822369 MsG0780040529.01.T01:intron 20.0%
!!! AGTGATCAAGATTTTATTAA+TGG + Chr7:78820004-78820023 None:intergenic 20.0%
!!! CGTAACATGTTTTTTTTTTT+AGG - Chr7:78822621-78822640 MsG0780040529.01.T01:intron 20.0%
!!! GTTAGTTTTATGTTTTATTG+CGG - Chr7:78822993-78823012 MsG0780040529.01.T01:intron 20.0%
!!! TCTTGTATAGAATAGTTTTA+TGG - Chr7:78819581-78819600 MsG0780040529.01.T01:intron 20.0%
! AACACCATTATTGTGATAAT+AGG + Chr7:78820843-78820862 None:intergenic 25.0%
! AACATTTACTATGAATGTTG+TGG - Chr7:78824290-78824309 MsG0780040529.01.T01:intron 25.0%
! AATATTAACTACTCTGATTG+GGG - Chr7:78822780-78822799 MsG0780040529.01.T01:CDS 25.0%
! AATCATTATATACGACATGA+TGG + Chr7:78823931-78823950 None:intergenic 25.0%
! ACACCATTATTGTGATAATA+GGG + Chr7:78820842-78820861 None:intergenic 25.0%
! ACATTTACTATGAATGTTGT+GGG - Chr7:78824291-78824310 MsG0780040529.01.T01:intron 25.0%
! ACTGAAGATGTTAAAAAACA+AGG - Chr7:78824386-78824405 MsG0780040529.01.T01:intron 25.0%
! ACTGAATAGTCAGATTATAT+TGG - Chr7:78823642-78823661 MsG0780040529.01.T01:intron 25.0%
! ATTAACTCCTGAAAGTAATA+CGG + Chr7:78819214-78819233 None:intergenic 25.0%
! CAAAATTACGGATACAATAA+TGG - Chr7:78820669-78820688 MsG0780040529.01.T01:intron 25.0%
! CAAAGAAAAAAATACAAGGA+GGG - Chr7:78822669-78822688 MsG0780040529.01.T01:intron 25.0%
! CATAAAAGAAAATCATCTTG+TGG - Chr7:78819145-78819164 MsG0780040529.01.T01:CDS 25.0%
! CTGAATAGTCAGATTATATT+GGG - Chr7:78823643-78823662 MsG0780040529.01.T01:intron 25.0%
! CTTAACTCTAATGAAAATGT+TGG + Chr7:78822207-78822226 None:intergenic 25.0%
! GTAATAATTCCAATATCAGA+AGG + Chr7:78824228-78824247 None:intergenic 25.0%
! GTAATAGGACAATTATATGT+GGG - Chr7:78821492-78821511 MsG0780040529.01.T01:intron 25.0%
! GTAATATTAACTACTCTGAT+TGG - Chr7:78822778-78822797 MsG0780040529.01.T01:CDS 25.0%
! GTTTAAAAATAATCCAGTTG+AGG + Chr7:78820164-78820183 None:intergenic 25.0%
! TAAACAGGATAGAATTAGAA+AGG - Chr7:78821746-78821765 MsG0780040529.01.T01:intron 25.0%
! TAATCACACTAAATCTTGTT+AGG - Chr7:78820791-78820810 MsG0780040529.01.T01:intron 25.0%
! TCAATTACTACAATGACATT+CGG - Chr7:78819620-78819639 MsG0780040529.01.T01:CDS 25.0%
! TCATGTCGTATATAATGATT+TGG - Chr7:78823931-78823950 MsG0780040529.01.T01:intron 25.0%
! TCGAACCATTGATATAATAA+TGG + Chr7:78824475-78824494 None:intergenic 25.0%
! TGAATAGTCAGATTATATTG+GGG - Chr7:78823644-78823663 MsG0780040529.01.T01:intron 25.0%
! TGTAATAGGACAATTATATG+TGG - Chr7:78821491-78821510 MsG0780040529.01.T01:intron 25.0%
! TGTTTGGTAAAACTCTTATA+CGG + Chr7:78823983-78824002 None:intergenic 25.0%
! TTAAATTGCGACATGTATTT+AGG - Chr7:78820475-78820494 MsG0780040529.01.T01:CDS 25.0%
!! AACTTATGATAATGATCTCA+AGG - Chr7:78820181-78820200 MsG0780040529.01.T01:intron 25.0%
!! ATAAATGATTTTGCAAACAC+AGG + Chr7:78820905-78820924 None:intergenic 25.0%
!! CACAAGATGATTTTCTTTTA+TGG + Chr7:78819147-78819166 None:intergenic 25.0%
!! CACTCTAGAAGAAAATTATA+CGG - Chr7:78821411-78821430 MsG0780040529.01.T01:intron 25.0%
!! CAGAAAAGAAGTTTAAAATG+TGG - Chr7:78821382-78821401 MsG0780040529.01.T01:intron 25.0%
!! TTGTCATTGATGATTTATGT+CGG - Chr7:78822543-78822562 MsG0780040529.01.T01:intron 25.0%
!!! AAGATGGTAAATGTTGTTTT+TGG - Chr7:78824352-78824371 MsG0780040529.01.T01:CDS 25.0%
!!! AGACAAGTGCTTTTAAAATT+AGG + Chr7:78823544-78823563 None:intergenic 25.0%
!!! ATCATCATTATTTTGTCAAG+AGG + Chr7:78822049-78822068 None:intergenic 25.0%
!!! ATGTGACAAATTTGTTAGTA+TGG - Chr7:78824562-78824581 MsG0780040529.01.T01:CDS 25.0%
!!! CACTTAATTTATTTTCGTGT+TGG + Chr7:78821686-78821705 None:intergenic 25.0%
!!! TGGATATTAATTTAACTTGC+TGG - Chr7:78819413-78819432 MsG0780040529.01.T01:CDS 25.0%
!!! TGTTGTTTTAAAACTCAACA+AGG - Chr7:78819271-78819290 MsG0780040529.01.T01:intron 25.0%
!!! TTGTTATTTTTCTCATTCTG+TGG - Chr7:78822119-78822138 MsG0780040529.01.T01:intron 25.0%
!!! TTTGCTCTTAGTAGTTTTTT+TGG + Chr7:78823608-78823627 None:intergenic 25.0%
AAAATTCCCAAAGGTTGTTA+AGG - Chr7:78824802-78824821 MsG0780040529.01.T01:CDS 30.0%
AAATGAATTGGAGAAAGACA+TGG - Chr7:78821975-78821994 MsG0780040529.01.T01:intron 30.0%
AAGTCTCAAATGTGAGAAAA+TGG + Chr7:78821617-78821636 None:intergenic 30.0%
ACATATGCTATATGATCTTG+AGG - Chr7:78823741-78823760 MsG0780040529.01.T01:intron 30.0%
ACTGAATATACACTGTTCTT+TGG - Chr7:78820757-78820776 MsG0780040529.01.T01:intron 30.0%
AGAAGTAAAATATGCCAATG+AGG + Chr7:78821183-78821202 None:intergenic 30.0%
AGGTGTAGTTTACAGATTAA+AGG - Chr7:78819322-78819341 MsG0780040529.01.T01:intron 30.0%
ATAAAATCTTGATCACTCTC+AGG - Chr7:78820007-78820026 MsG0780040529.01.T01:intron 30.0%
ATATAATGACTTTCTCTCTC+CGG + Chr7:78824026-78824045 None:intergenic 30.0%
ATATTACAAGAAGTGAAACG+TGG - Chr7:78821038-78821057 MsG0780040529.01.T01:CDS 30.0%
ATCTATTACTCTGTAGTTAG+GGG - Chr7:78820734-78820753 MsG0780040529.01.T01:intron 30.0%
ATGAGTATTAAGTACACACT+TGG + Chr7:78822175-78822194 None:intergenic 30.0%
ATGATCTCAAGGAATAATAC+AGG - Chr7:78820192-78820211 MsG0780040529.01.T01:intron 30.0%
ATTAGTTGGTTGGAAATAAG+TGG - Chr7:78820591-78820610 MsG0780040529.01.T01:intron 30.0%
ATTATAATTAAGGCCTCAAC+TGG - Chr7:78820148-78820167 MsG0780040529.01.T01:intron 30.0%
ATTGAAATCTCAACAGTTGA+TGG - Chr7:78824426-78824445 MsG0780040529.01.T01:intron 30.0%
CAGAGAAATTCAATATGGAA+GGG + Chr7:78822338-78822357 None:intergenic 30.0%
CATATGCTATATGATCTTGA+GGG - Chr7:78823742-78823761 MsG0780040529.01.T01:intron 30.0%
CATCTATTACTCTGTAGTTA+GGG - Chr7:78820733-78820752 MsG0780040529.01.T01:intron 30.0%
CCAAAGAAAAAAATACAAGG+AGG - Chr7:78822668-78822687 MsG0780040529.01.T01:intron 30.0%
CTAACTACAGAGTAATAGAT+GGG + Chr7:78820734-78820753 None:intergenic 30.0%
CTAATAAGAACTTACTGTGA+AGG - Chr7:78819693-78819712 MsG0780040529.01.T01:CDS 30.0%
GACATGTATTTAGAAAAGGA+GGG + Chr7:78820255-78820274 None:intergenic 30.0%
GATCCCTATTATCACAATAA+TGG - Chr7:78820836-78820855 MsG0780040529.01.T01:intron 30.0%
GCATTAATACAGTTGAGTAA+AGG - Chr7:78819889-78819908 MsG0780040529.01.T01:intron 30.0%
GGAAGCCATTATTATATCAA+TGG - Chr7:78824467-78824486 MsG0780040529.01.T01:intron 30.0%
GGATCTAGAGATAAATGAAT+TGG - Chr7:78821963-78821982 MsG0780040529.01.T01:intron 30.0%
GGTTCGATCAAATTCAAAAA+AGG - Chr7:78824488-78824507 MsG0780040529.01.T01:intron 30.0%
GTAAAATAGTTATACCTGTG+TGG + Chr7:78821128-78821147 None:intergenic 30.0%
TAAAGAGCTTTACAACAGTA+AGG - Chr7:78823514-78823533 MsG0780040529.01.T01:intron 30.0%
TAACTACAGAGTAATAGATG+GGG + Chr7:78820733-78820752 None:intergenic 30.0%
TAATGGTCTAAGTTGTGTAT+TGG + Chr7:78820300-78820319 None:intergenic 30.0%
TACAGAACAATTCTATACCT+GGG + Chr7:78824262-78824281 None:intergenic 30.0%
TCAGAGAAATTCAATATGGA+AGG + Chr7:78822339-78822358 None:intergenic 30.0%
TCGATCAAATTCAAAAAAGG+AGG - Chr7:78824491-78824510 MsG0780040529.01.T01:intron 30.0%
TCTTCTGTTCAATATCAAAC+TGG - Chr7:78819105-78819124 MsG0780040529.01.T01:CDS 30.0%
TGATCTCAAGGAATAATACA+GGG - Chr7:78820193-78820212 MsG0780040529.01.T01:intron 30.0%
TGGAAAATTGTTCACAGAAT+TGG - Chr7:78821273-78821292 MsG0780040529.01.T01:intron 30.0%
TTATATGTGGGATAGTTATG+TGG - Chr7:78821504-78821523 MsG0780040529.01.T01:intron 30.0%
TTCAGATTCACCTTCATTAA+GGG + Chr7:78824160-78824179 None:intergenic 30.0%
TTGGAAATTGCATCTTTCTT+TGG + Chr7:78820942-78820961 None:intergenic 30.0%
TTTAATGTTGAATCAAGCAC+AGG + Chr7:78823229-78823248 None:intergenic 30.0%
TTTACAATTTAGGTACTTCG+AGG - Chr7:78822360-78822379 MsG0780040529.01.T01:intron 30.0%
! AAAACAAAGTTGCTTTGAAC+TGG - Chr7:78823179-78823198 MsG0780040529.01.T01:intron 30.0%
! AAATGGTCTTAATCCTTATC+AGG + Chr7:78819172-78819191 None:intergenic 30.0%
! AAGAATGTTTTCTTGCTACA+TGG - Chr7:78820975-78820994 MsG0780040529.01.T01:CDS 30.0%
! AATGGTCTTAATCCTTATCA+GGG + Chr7:78819171-78819190 None:intergenic 30.0%
! ATGGTTTTTGATAGAATGCT+AGG - Chr7:78821994-78822013 MsG0780040529.01.T01:intron 30.0%
! CATTTTCATTAGAGTTAAGC+TGG - Chr7:78822208-78822227 MsG0780040529.01.T01:intron 30.0%
! CTCCTTTTCTAAATACATGT+CGG - Chr7:78820254-78820273 MsG0780040529.01.T01:intron 30.0%
! TCTACCATCTTTTCTACTAT+AGG + Chr7:78821807-78821826 None:intergenic 30.0%
! TTTGATGATATTCCAGAAGA+TGG - Chr7:78819477-78819496 MsG0780040529.01.T01:intron 30.0%
!! ACGTTTTAGTAGTTTTACGA+AGG - Chr7:78824324-78824343 MsG0780040529.01.T01:CDS 30.0%
!! ATCATTTTTCTTTGCACATC+TGG - Chr7:78820879-78820898 MsG0780040529.01.T01:intron 30.0%
!! ATCTAATTCCTGTCTTGTTT+GGG - Chr7:78819935-78819954 MsG0780040529.01.T01:intron 30.0%
!! ATTTTCTCACATTTGAGACT+TGG - Chr7:78821616-78821635 MsG0780040529.01.T01:intron 30.0%
!! GATTGATATTTTGAAGAGCA+TGG - Chr7:78824740-78824759 MsG0780040529.01.T01:intron 30.0%
!!! CCTCCTTGTATTTTTTTCTT+TGG + Chr7:78822671-78822690 None:intergenic 30.0%
!!! GATATATTTTTTGCTCATCC+AGG - Chr7:78819843-78819862 MsG0780040529.01.T01:intron 30.0%
!!! GATTTTTTGTTGTTGCAGTT+TGG - Chr7:78819236-78819255 MsG0780040529.01.T01:intron 30.0%
AAAATCAATTACTTGCCCCT+GGG - Chr7:78819807-78819826 MsG0780040529.01.T01:intron 35.0%
AAACTAGACTTAGGTGGTTT+GGG - Chr7:78821826-78821845 MsG0780040529.01.T01:intron 35.0%
AAATATGTAACTGTAAGCGG+CGG - Chr7:78821528-78821547 MsG0780040529.01.T01:intron 35.0%
AACAATAAGTGCCTAAGATC+AGG + Chr7:78819558-78819577 None:intergenic 35.0%
AACATGCTCTGCATATTAGT+TGG - Chr7:78820577-78820596 MsG0780040529.01.T01:intron 35.0%
AATTAAGTGTAGCAGAGATG+AGG - Chr7:78821697-78821716 MsG0780040529.01.T01:intron 35.0%
ACATAAGAGAGCTATCAAGA+AGG - Chr7:78821942-78821961 MsG0780040529.01.T01:intron 35.0%
ACTTGAATATACGTTTCAGG+TGG - Chr7:78824605-78824624 MsG0780040529.01.T01:intron 35.0%
AGAAAACATTCTTCGACGAT+AGG + Chr7:78820968-78820987 None:intergenic 35.0%
AGATGGTAGAAACTAGACTT+AGG - Chr7:78821817-78821836 MsG0780040529.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG - Chr7:78821800-78821819 MsG0780040529.01.T01:intron 35.0%
AGTATTGCCAAGTTTCTTAG+AGG + Chr7:78822809-78822828 None:intergenic 35.0%
ATAGAATTGTTCTGTAGGTG+TGG - Chr7:78824266-78824285 MsG0780040529.01.T01:intron 35.0%
ATATCATGTTGCATCAATCC+AGG + Chr7:78823092-78823111 None:intergenic 35.0%
ATCAATGCCGTATTACTTTC+AGG - Chr7:78819204-78819223 MsG0780040529.01.T01:CDS 35.0%
ATTATCATAGCAGCAAGAGA+TGG + Chr7:78821150-78821169 None:intergenic 35.0%
CAAACAACTGAACTGATATG+TGG - Chr7:78823997-78824016 MsG0780040529.01.T01:intron 35.0%
CACATATCAGTTCAGTTGTT+TGG + Chr7:78823999-78824018 None:intergenic 35.0%
CACTGACAAACTTAAAGAGT+AGG + Chr7:78821329-78821348 None:intergenic 35.0%
CAGGTATAGAATTGTTCTGT+AGG - Chr7:78824261-78824280 MsG0780040529.01.T01:intron 35.0%
CATCTTGTACCCTAAAAACA+AGG + Chr7:78823322-78823341 None:intergenic 35.0%
CCATCTATTACTCTGTAGTT+AGG - Chr7:78820732-78820751 MsG0780040529.01.T01:intron 35.0%
CCTAACTACAGAGTAATAGA+TGG + Chr7:78820735-78820754 None:intergenic 35.0%
CGACATGTATTTAGAAAAGG+AGG + Chr7:78820256-78820275 None:intergenic 35.0%
CTACAGAACAATTCTATACC+TGG + Chr7:78824263-78824282 None:intergenic 35.0%
CTCCGACATGTATTTAGAAA+AGG + Chr7:78820259-78820278 None:intergenic 35.0%
CTTCAGATTCACCTTCATTA+AGG + Chr7:78824161-78824180 None:intergenic 35.0%
GAAAACATTCTTCGACGATA+GGG + Chr7:78820967-78820986 None:intergenic 35.0%
GAGACTTGAATATACGTTTC+AGG - Chr7:78824602-78824621 MsG0780040529.01.T01:intron 35.0%
GATCTCAAGGAATAATACAG+GGG - Chr7:78820194-78820213 MsG0780040529.01.T01:intron 35.0%
GGAGGAATGAACTATATTGT+TGG + Chr7:78823060-78823079 None:intergenic 35.0%
GGCAAATATGTAACTGTAAG+CGG - Chr7:78821525-78821544 MsG0780040529.01.T01:intron 35.0%
GGTTTGATACAATTGCTAAC+AGG - Chr7:78819434-78819453 MsG0780040529.01.T01:CDS 35.0%
GTTGTCAACAGCAATATTTG+AGG + Chr7:78821087-78821106 None:intergenic 35.0%
TAAAATCAATTACTTGCCCC+TGG - Chr7:78819806-78819825 MsG0780040529.01.T01:intron 35.0%
TAGAATTGTTCTGTAGGTGT+GGG - Chr7:78824267-78824286 MsG0780040529.01.T01:intron 35.0%
TATCATTGAGTGTAGTGTGT+AGG + Chr7:78822916-78822935 None:intergenic 35.0%
TCTCTTGCTGCTATGATAAT+TGG - Chr7:78821150-78821169 MsG0780040529.01.T01:CDS 35.0%
TGAATAGGCAAAATTCCCAA+AGG - Chr7:78824793-78824812 MsG0780040529.01.T01:CDS 35.0%
TGACATTCGGAAAGAAATGA+AGG - Chr7:78822404-78822423 MsG0780040529.01.T01:intron 35.0%
TGATTGTGTCAGATGTGATA+TGG - Chr7:78824107-78824126 MsG0780040529.01.T01:intron 35.0%
TGCATCAACTTATCATGGAT+TGG - Chr7:78823486-78823505 MsG0780040529.01.T01:intron 35.0%
TTCGGAAAGAAATGAAGGTA+AGG - Chr7:78822409-78822428 MsG0780040529.01.T01:intron 35.0%
TTGCGACATGTATTTAGGAA+CGG - Chr7:78820480-78820499 MsG0780040529.01.T01:CDS 35.0%
! AAACTCAACAAGGCTGATTT+AGG - Chr7:78819281-78819300 MsG0780040529.01.T01:intron 35.0%
! CTTGAATATACGTTTCAGGT+GGG - Chr7:78824606-78824625 MsG0780040529.01.T01:intron 35.0%
! GAAGGTTTGAATCTTGCTTT+TGG - Chr7:78819711-78819730 MsG0780040529.01.T01:CDS 35.0%
! GATCTAATTCCTGTCTTGTT+TGG - Chr7:78819934-78819953 MsG0780040529.01.T01:intron 35.0%
! GGAATTTTGCCTATTCATTC+TGG + Chr7:78824790-78824809 None:intergenic 35.0%
! TGGGGAGATAAACATTTTGT+TGG - Chr7:78823662-78823681 MsG0780040529.01.T01:intron 35.0%
! TTCTGTGAACAATTTTCCAC+AGG + Chr7:78821272-78821291 None:intergenic 35.0%
! TTGAGTAAAGGAGTGCATAA+GGG - Chr7:78819901-78819920 MsG0780040529.01.T01:intron 35.0%
! TTTTACGAAGGATGACAAGA+TGG - Chr7:78824336-78824355 MsG0780040529.01.T01:CDS 35.0%
! TTTTGTTGGATCTTCATGCA+TGG - Chr7:78823676-78823695 MsG0780040529.01.T01:intron 35.0%
!! CCATGATAAGTTGATGCATA+CGG + Chr7:78823484-78823503 None:intergenic 35.0%
!! GTAGTGATGGATTTCTAAAG+CGG - Chr7:78824715-78824734 MsG0780040529.01.T01:intron 35.0%
!! TCTAATTCCTGTCTTGTTTG+GGG - Chr7:78819936-78819955 MsG0780040529.01.T01:intron 35.0%
!!! AAATGGAGGTCCTTGTTTTT+AGG - Chr7:78823309-78823328 MsG0780040529.01.T01:intron 35.0%
!!! AATGGAGGTCCTTGTTTTTA+GGG - Chr7:78823310-78823329 MsG0780040529.01.T01:intron 35.0%
!!! TGGTAAATGTTGTTTTTGGC+AGG - Chr7:78824356-78824375 MsG0780040529.01.T01:CDS 35.0%
AAACAAGGAGAACTCACTGA+AGG - Chr7:78824401-78824420 MsG0780040529.01.T01:intron 40.0%
AACGGGAAAAACTACAACAG+TGG - Chr7:78821007-78821026 MsG0780040529.01.T01:CDS 40.0%
AAGTATGACAAGTGTGTACC+TGG + Chr7:78822292-78822311 None:intergenic 40.0%
ACAGCAACCTTAACAACCTT+TGG + Chr7:78824812-78824831 None:intergenic 40.0%
ACAGGAATTAGATCAGAAGC+AGG + Chr7:78819928-78819947 None:intergenic 40.0%
ACAGTCTGCAAGTCTTTCAA+AGG + Chr7:78823425-78823444 None:intergenic 40.0%
AGTATGACAAGTGTGTACCT+GGG + Chr7:78822291-78822310 None:intergenic 40.0%
AGTCAAATCACTAGAGGTAG+GGG - Chr7:78821906-78821925 MsG0780040529.01.T01:intron 40.0%
AGTCTGCAAGTCTTTCAAAG+GGG + Chr7:78823423-78823442 None:intergenic 40.0%
AGTGAAAGCTACATCCTTCT+TGG + Chr7:78819980-78819999 None:intergenic 40.0%
ATCAACATTACCTTCAGCAG+AGG + Chr7:78822892-78822911 None:intergenic 40.0%
ATCCCGTATATAAGAACCCA+GGG + Chr7:78819826-78819845 None:intergenic 40.0%
ATCCGAGTACCAGAATGAAT+AGG - Chr7:78824778-78824797 MsG0780040529.01.T01:CDS 40.0%
ATGGAGAGTAGATCAGATAG+AGG - Chr7:78821881-78821900 MsG0780040529.01.T01:intron 40.0%
ATGGTTTAAACAGTCCCCTA+AGG - Chr7:78819496-78819515 MsG0780040529.01.T01:intron 40.0%
ATTAGAGAGAGAGAGAGAGT+TGG - Chr7:78821774-78821793 MsG0780040529.01.T01:intron 40.0%
CAAGAGGAAGAACTTTGACA+GGG + Chr7:78822033-78822052 None:intergenic 40.0%
CACACTTGTCATACTTGTCA+TGG - Chr7:78822296-78822315 MsG0780040529.01.T01:intron 40.0%
CACTATGTGATAACAGGTCA+AGG - Chr7:78823699-78823718 MsG0780040529.01.T01:intron 40.0%
CAGCAACCTTAACAACCTTT+GGG + Chr7:78824811-78824830 None:intergenic 40.0%
CAGTCTGCAAGTCTTTCAAA+GGG + Chr7:78823424-78823443 None:intergenic 40.0%
CATCAATCCAGGACACTTAT+TGG + Chr7:78823081-78823100 None:intergenic 40.0%
CCAATATTATTAGTGTCGCC+TGG - Chr7:78822493-78822512 MsG0780040529.01.T01:intron 40.0%
CCAGGCGACACTAATAATAT+TGG + Chr7:78822496-78822515 None:intergenic 40.0%
CCGTATGCATCAACTTATCA+TGG - Chr7:78823481-78823500 MsG0780040529.01.T01:intron 40.0%
GAAAAAATTGCCCATGCTGT+TGG - Chr7:78819371-78819390 MsG0780040529.01.T01:CDS 40.0%
GAAACTAGACTTAGGTGGTT+TGG - Chr7:78821825-78821844 MsG0780040529.01.T01:intron 40.0%
GAACAAAGTTACTGTTCAGG+TGG + Chr7:78820708-78820727 None:intergenic 40.0%
GAAGATAGCACCCTTAATGA+AGG - Chr7:78824147-78824166 MsG0780040529.01.T01:intron 40.0%
GACATGTATTTAGGAACGGA+GGG - Chr7:78820484-78820503 MsG0780040529.01.T01:CDS 40.0%
GACTTGTGGATTCTGTAGTA+TGG - Chr7:78821862-78821881 MsG0780040529.01.T01:intron 40.0%
GAGGAACAAAGTTACTGTTC+AGG + Chr7:78820711-78820730 None:intergenic 40.0%
GAGTCAAATCACTAGAGGTA+GGG - Chr7:78821905-78821924 MsG0780040529.01.T01:intron 40.0%
GATGTGTGGTAAGACTAAAC+AGG - Chr7:78821731-78821750 MsG0780040529.01.T01:intron 40.0%
GCAAGGTGTATCTACTAGAT+TGG - Chr7:78821653-78821672 MsG0780040529.01.T01:intron 40.0%
GCTGATAAGTTCCTGATCTT+AGG - Chr7:78819544-78819563 MsG0780040529.01.T01:intron 40.0%
GCTGGAAAAAGTTGCAAATG+AGG - Chr7:78819518-78819537 MsG0780040529.01.T01:intron 40.0%
GCTTCAACACTTTGAATCGT+TGG + Chr7:78823376-78823395 None:intergenic 40.0%
GGACTGTTTAAACCATCTTC+TGG + Chr7:78819492-78819511 None:intergenic 40.0%
GGTACAAGATGTATACTTGC+AGG - Chr7:78823331-78823350 MsG0780040529.01.T01:intron 40.0%
GTACTTCGAGGAGATAATAG+TGG - Chr7:78822372-78822391 MsG0780040529.01.T01:intron 40.0%
TATCCCGTATATAAGAACCC+AGG + Chr7:78819827-78819846 None:intergenic 40.0%
TCAACACTTTGAATCGTTGG+AGG + Chr7:78823373-78823392 None:intergenic 40.0%
TCAAGAGGAAGAACTTTGAC+AGG + Chr7:78822034-78822053 None:intergenic 40.0%
TCATTAGAGTTAAGCTGGTG+AGG - Chr7:78822213-78822232 MsG0780040529.01.T01:intron 40.0%
TGAAAGACTTGCAGACTGTA+TGG - Chr7:78823426-78823445 MsG0780040529.01.T01:intron 40.0%
TGCCTATTCATTCTGGTACT+CGG + Chr7:78824783-78824802 None:intergenic 40.0%
TGCTCTGCATATTAGTTGGT+TGG - Chr7:78820581-78820600 MsG0780040529.01.T01:intron 40.0%
TGGAGAGTAGATCAGATAGA+GGG - Chr7:78821882-78821901 MsG0780040529.01.T01:intron 40.0%
TGGTAGAAACTAGACTTAGG+TGG - Chr7:78821820-78821839 MsG0780040529.01.T01:intron 40.0%
TGGTGAGACATGTTCATACT+TGG - Chr7:78822139-78822158 MsG0780040529.01.T01:intron 40.0%
TTACGCACTGTGAAACTGAA+AGG + Chr7:78822606-78822625 None:intergenic 40.0%
TTAGAGAGAGAGAGAGAGTT+GGG - Chr7:78821775-78821794 MsG0780040529.01.T01:intron 40.0%
TTGCTGCTATGATAATTGGC+TGG - Chr7:78821154-78821173 MsG0780040529.01.T01:CDS 40.0%
! AGGTGAATCTGAAGTTGCTA+TGG - Chr7:78824167-78824186 MsG0780040529.01.T01:intron 40.0%
! AGTGTTGAAGCTGAGAAGAA+AGG - Chr7:78823385-78823404 MsG0780040529.01.T01:intron 40.0%
! ATTTAGGTTCTCCTGCTCTT+GGG - Chr7:78819297-78819316 MsG0780040529.01.T01:intron 40.0%
! GTGAACAATTTTCCACAGGA+GGG + Chr7:78821268-78821287 None:intergenic 40.0%
! GTTGAGTAAAGGAGTGCATA+AGG - Chr7:78819900-78819919 MsG0780040529.01.T01:intron 40.0%
! TAATTGGCTGGTTACCTCAT+TGG - Chr7:78821166-78821185 MsG0780040529.01.T01:CDS 40.0%
! TGTGAACAATTTTCCACAGG+AGG + Chr7:78821269-78821288 None:intergenic 40.0%
!! ACATTTGAGACTTGGCTCTA+AGG - Chr7:78821624-78821643 MsG0780040529.01.T01:intron 40.0%
!! TAAGTTGATGCATACGGTAC+TGG + Chr7:78823478-78823497 None:intergenic 40.0%
!! TCAACAGTTGATGGTTTCCA+GGG - Chr7:78824435-78824454 MsG0780040529.01.T01:intron 40.0%
!! TGCAACTTTTTCCAGCCTTA+GGG + Chr7:78819514-78819533 None:intergenic 40.0%
!! TTGCAACTTTTTCCAGCCTT+AGG + Chr7:78819515-78819534 None:intergenic 40.0%
AAAGCGATTGGTGCAAAGTG+GGG - Chr7:78824197-78824216 MsG0780040529.01.T01:intron 45.0%
ACATCCTTCTTGGACACTGT+TGG + Chr7:78819970-78819989 None:intergenic 45.0%
ACGTTTATTGCCTCAAGTGG+TGG - Chr7:78822250-78822269 MsG0780040529.01.T01:intron 45.0%
ACTGAGACAGTCAGTAGTGA+TGG - Chr7:78824702-78824721 MsG0780040529.01.T01:intron 45.0%
ACTTGAGGCAATAAACGTGC+AGG + Chr7:78822248-78822267 None:intergenic 45.0%
AGAGTTAAGCTGGTGAGGAT+TGG - Chr7:78822218-78822237 MsG0780040529.01.T01:intron 45.0%
AGCCGTGTCTATGAGAAGAA+GGG + Chr7:78823796-78823815 None:intergenic 45.0%
ATCATCTTGTGGCCCTGATA+AGG - Chr7:78819156-78819175 MsG0780040529.01.T01:CDS 45.0%
ATTCTTCGACGATAGGGCTT+TGG + Chr7:78820961-78820980 None:intergenic 45.0%
CAAAGCGATTGGTGCAAAGT+GGG - Chr7:78824196-78824215 MsG0780040529.01.T01:intron 45.0%
CAATCCAGGACACTTATTGG+AGG + Chr7:78823078-78823097 None:intergenic 45.0%
CACCCTTCTTCTCATAGACA+CGG - Chr7:78823791-78823810 MsG0780040529.01.T01:intron 45.0%
CACTCATTTACCTTGTGAGC+AGG + Chr7:78819068-78819087 None:intergenic 45.0%
CATTCCTCCAATAAGTGTCC+TGG - Chr7:78823071-78823090 MsG0780040529.01.T01:intron 45.0%
CGACATGTATTTAGGAACGG+AGG - Chr7:78820483-78820502 MsG0780040529.01.T01:CDS 45.0%
CTACAGAGTAATAGATGGGG+AGG + Chr7:78820730-78820749 None:intergenic 45.0%
CTGAACTGATATGTGGAAGC+CGG - Chr7:78824004-78824023 MsG0780040529.01.T01:intron 45.0%
CTGTTGACAACATCGTTGAG+CGG - Chr7:78821096-78821115 MsG0780040529.01.T01:CDS 45.0%
GAAGCTGAGAAGAAAGGCTT+AGG - Chr7:78823391-78823410 MsG0780040529.01.T01:intron 45.0%
GCATGGCACTATGTGATAAC+AGG - Chr7:78823693-78823712 MsG0780040529.01.T01:intron 45.0%
GCATGTAGAGAGAAGACTTG+TGG - Chr7:78821848-78821867 MsG0780040529.01.T01:intron 45.0%
GGAGAGTAGATCAGATAGAG+GGG - Chr7:78821883-78821902 MsG0780040529.01.T01:intron 45.0%
GGAGTCAAATCACTAGAGGT+AGG - Chr7:78821904-78821923 MsG0780040529.01.T01:intron 45.0%
GGGAAAAACTACAACAGTGG+TGG - Chr7:78821010-78821029 MsG0780040529.01.T01:CDS 45.0%
GGGAGATACAGAAGGAACTT+AGG - Chr7:78822689-78822708 MsG0780040529.01.T01:intron 45.0%
GTGGTCTCGCAAATGACATT+CGG - Chr7:78822391-78822410 MsG0780040529.01.T01:intron 45.0%
TACAAGGAGGGAGATACAGA+AGG - Chr7:78822681-78822700 MsG0780040529.01.T01:intron 45.0%
TAGAGAGAGAGAGAGAGTTG+GGG - Chr7:78821776-78821795 MsG0780040529.01.T01:intron 45.0%
TATCCAGAGAAGAGCGGAAA+AGG - Chr7:78822716-78822735 MsG0780040529.01.T01:intron 45.0%
TATGGCTCATGCAAAGCGAT+TGG - Chr7:78824185-78824204 MsG0780040529.01.T01:intron 45.0%
TCCCGTATATAAGAACCCAG+GGG + Chr7:78819825-78819844 None:intergenic 45.0%
TCGTTGGAGGAAGTTGAAGA+TGG + Chr7:78823360-78823379 None:intergenic 45.0%
TCTATACCTGGGCAGCATAT+GGG + Chr7:78824251-78824270 None:intergenic 45.0%
TGCACGTTTATTGCCTCAAG+TGG - Chr7:78822247-78822266 MsG0780040529.01.T01:intron 45.0%
TGCCCCTGGGTTCTTATATA+CGG - Chr7:78819820-78819839 MsG0780040529.01.T01:intron 45.0%
TTCTATACCTGGGCAGCATA+TGG + Chr7:78824252-78824271 None:intergenic 45.0%
TTCTTCTCATAGACACGGCT+GGG - Chr7:78823796-78823815 MsG0780040529.01.T01:intron 45.0%
TTGTCTTCTTGCACGTGTCA+CGG + Chr7:78824664-78824683 None:intergenic 45.0%
TTTAAACAGTCCCCTAAGGC+TGG - Chr7:78819500-78819519 MsG0780040529.01.T01:intron 45.0%
TTTCTGCATGATCCAGAACC+CGG + Chr7:78821368-78821387 None:intergenic 45.0%
! GATTTAGGTTCTCCTGCTCT+TGG - Chr7:78819296-78819315 MsG0780040529.01.T01:intron 45.0%
! GTTGTAGTTTTTCCCGTTCC+AGG + Chr7:78821005-78821024 None:intergenic 45.0%
! GTTGTGTATTGGCATGTGCA+AGG + Chr7:78820289-78820308 None:intergenic 45.0%
!! AGGAAGCACATCTGCTTTTG+TGG + Chr7:78819048-78819067 None:intergenic 45.0%
!! CTCAACAGTTGATGGTTTCC+AGG - Chr7:78824434-78824453 MsG0780040529.01.T01:intron 45.0%
!! GCAACTTTTTCCAGCCTTAG+GGG + Chr7:78819513-78819532 None:intergenic 45.0%
!! TAAATACTTTATTATAATTA+AGG - Chr7:78820138-78820157 MsG0780040529.01.T01:intron 5.0%
!!! TATATATTGATTAAAAAATA+TGG - Chr7:78820421-78820440 MsG0780040529.01.T01:CDS 5.0%
AAACAACGTCTACCCTCCTG+TGG - Chr7:78821253-78821272 MsG0780040529.01.T01:intron 50.0%
AAGCACTTGAGGTTGCATGC+TGG - Chr7:78822863-78822882 MsG0780040529.01.T01:CDS 50.0%
AGATGTGCTTCCTGCTCACA+AGG - Chr7:78819055-78819074 MsG0780040529.01.T01:CDS 50.0%
AGGATGTTGCGTTGGATGTG+TGG - Chr7:78821717-78821736 MsG0780040529.01.T01:intron 50.0%
ATGCTGGATACCTCTGCTGA+AGG - Chr7:78822879-78822898 MsG0780040529.01.T01:CDS 50.0%
CAGAGATGAGGATGTTGCGT+TGG - Chr7:78821709-78821728 MsG0780040529.01.T01:intron 50.0%
CAGCCGTGTCTATGAGAAGA+AGG + Chr7:78823797-78823816 None:intergenic 50.0%
CGTGTCTATGAGAAGAAGGG+TGG + Chr7:78823793-78823812 None:intergenic 50.0%
CTATACCTGGGCAGCATATG+GGG + Chr7:78824250-78824269 None:intergenic 50.0%
CTTCTTCTCATAGACACGGC+TGG - Chr7:78823795-78823814 MsG0780040529.01.T01:intron 50.0%
GAAGCAACAGAACATCAGCC+AGG + Chr7:78822514-78822533 None:intergenic 50.0%
GAGGGGAGTCAAATCACTAG+AGG - Chr7:78821900-78821919 MsG0780040529.01.T01:intron 50.0%
GCAAAGCGATTGGTGCAAAG+TGG - Chr7:78824195-78824214 MsG0780040529.01.T01:intron 50.0%
GCAACCAACAGTGTCCAAGA+AGG - Chr7:78819963-78819982 MsG0780040529.01.T01:intron 50.0%
GCCCCTGGGTTCTTATATAC+GGG - Chr7:78819821-78819840 MsG0780040529.01.T01:intron 50.0%
GGACTCTATCCAGAGAAGAG+CGG - Chr7:78822710-78822729 MsG0780040529.01.T01:intron 50.0%
GTGCCAAAGTCAGTAAGTGC+CGG - Chr7:78821346-78821365 MsG0780040529.01.T01:intron 50.0%
TATTACCCCATATGCTGCCC+AGG - Chr7:78824242-78824261 MsG0780040529.01.T01:intron 50.0%
TCATCCAGGTGACATATCGC+AGG - Chr7:78819857-78819876 MsG0780040529.01.T01:intron 50.0%
TCATCCTGCGATATGTCACC+TGG + Chr7:78819864-78819883 None:intergenic 50.0%
TGCCAAAGTCAGTAAGTGCC+GGG - Chr7:78821347-78821366 MsG0780040529.01.T01:intron 50.0%
TGGTTTCCAGGGAAGAGAGA+AGG - Chr7:78824446-78824465 MsG0780040529.01.T01:intron 50.0%
TTCTTGCTACATGGACCTCC+TGG - Chr7:78820984-78821003 MsG0780040529.01.T01:CDS 50.0%
! GGGGCTTCCTCTAAGAAACT+TGG - Chr7:78822799-78822818 MsG0780040529.01.T01:CDS 50.0%
! GGGGTGCTTCCTTCTGATAT+TGG - Chr7:78824216-78824235 MsG0780040529.01.T01:intron 50.0%
! GTAGTTTTTCCCGTTCCAGG+AGG + Chr7:78821002-78821021 None:intergenic 50.0%
! GTGTATTGGCATGTGCAAGG+TGG + Chr7:78820286-78820305 None:intergenic 50.0%
! TCAGAGCTGCTTGACTAGTC+TGG - Chr7:78823856-78823875 MsG0780040529.01.T01:intron 50.0%
!! AACCCGGCACTTACTGACTT+TGG + Chr7:78821352-78821371 None:intergenic 50.0%
!! GCTTGACTAGTCTGGACATG+TGG - Chr7:78823864-78823883 MsG0780040529.01.T01:intron 50.0%
!! TTCCTGTCTTGTTTGGGGAG+AGG - Chr7:78819941-78819960 MsG0780040529.01.T01:intron 50.0%
!! TTGAGACTTGGCTCTAAGGC+TGG - Chr7:78821628-78821647 MsG0780040529.01.T01:intron 50.0%
ACTACACCTTGCCCAAGAGC+AGG + Chr7:78819311-78819330 None:intergenic 55.0%
ACTGTCCACAGCCAACAGCA+TGG + Chr7:78819385-78819404 None:intergenic 55.0%
AGTGCACTGTCCACCACTTG+AGG + Chr7:78822263-78822282 None:intergenic 55.0%
CGAAGCTGCTCAAGCACTTG+AGG - Chr7:78822852-78822871 MsG0780040529.01.T01:CDS 55.0%
CTACATGGACCTCCTGGAAC+GGG - Chr7:78820990-78821009 MsG0780040529.01.T01:CDS 55.0%
CTGTCCACAGCCAACAGCAT+GGG + Chr7:78819384-78819403 None:intergenic 55.0%
GCTACATGGACCTCCTGGAA+CGG - Chr7:78820989-78821008 MsG0780040529.01.T01:CDS 55.0%
GCTGTGGACAGTCTCACCTT+TGG - Chr7:78819393-78819412 MsG0780040529.01.T01:CDS 55.0%
TCACGGCCACATTCATTCGC+CGG + Chr7:78824647-78824666 None:intergenic 55.0%
TGATCGCCGGCGAATGAATG+TGG - Chr7:78824638-78824657 MsG0780040529.01.T01:intron 55.0%
TGCCTCTCCCCAAACAAGAC+AGG + Chr7:78819946-78819965 None:intergenic 55.0%
TGGCTTCCTTCTCTCTTCCC+TGG + Chr7:78824455-78824474 None:intergenic 55.0%
TGGGCTTTCTGAGTGATCGC+CGG - Chr7:78824625-78824644 MsG0780040529.01.T01:intron 55.0%
TGTAACTGTAAGCGGCGGTG+TGG - Chr7:78821533-78821552 MsG0780040529.01.T01:intron 55.0%
! ATTGCCCATGCTGTTGGCTG+TGG - Chr7:78819377-78819396 MsG0780040529.01.T01:CDS 55.0%
! CTGCCTTTTCCGCTCTTCTC+TGG + Chr7:78822722-78822741 None:intergenic 55.0%
! TTGAGCGGCTAGTTCCACAC+AGG - Chr7:78821111-78821130 MsG0780040529.01.T01:CDS 55.0%
!! AGTCAGTAAGTGCCGGGTTC+TGG - Chr7:78821353-78821372 MsG0780040529.01.T01:intron 55.0%
!! TCAAGTGGTGGACAGTGCAC+TGG - Chr7:78822262-78822281 MsG0780040529.01.T01:intron 55.0%
!! TGGCTCTAAGGCTGGTAGCA+AGG - Chr7:78821636-78821655 MsG0780040529.01.T01:intron 55.0%
ACTGTAAGCGGCGGTGTGGA+AGG - Chr7:78821537-78821556 MsG0780040529.01.T01:intron 60.0%
GGTTCTCCTGCTCTTGGGCA+AGG - Chr7:78819302-78819321 MsG0780040529.01.T01:intron 60.0%
GGACAGTGCACTGGATGCCC+AGG - Chr7:78822271-78822290 MsG0780040529.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78819017 78824836 78819017 ID=MsG0780040529.01;Name=MsG0780040529.01
Chr7 mRNA 78819017 78824836 78819017 ID=MsG0780040529.01.T01;Parent=MsG0780040529.01;Name=MsG0780040529.01.T01;_AED=0.47;_eAED=0.52;_QI=0|0|0|1|1|1|11|0|483
Chr7 exon 78824777 78824836 78824777 ID=MsG0780040529.01.T01:exon:16155;Parent=MsG0780040529.01.T01
Chr7 exon 78824510 78824599 78824510 ID=MsG0780040529.01.T01:exon:16154;Parent=MsG0780040529.01.T01
Chr7 exon 78824314 78824397 78824314 ID=MsG0780040529.01.T01:exon:16153;Parent=MsG0780040529.01.T01
Chr7 exon 78822721 78822908 78822721 ID=MsG0780040529.01.T01:exon:16152;Parent=MsG0780040529.01.T01
Chr7 exon 78821561 78821633 78821561 ID=MsG0780040529.01.T01:exon:16151;Parent=MsG0780040529.01.T01
Chr7 exon 78821428 78821481 78821428 ID=MsG0780040529.01.T01:exon:16150;Parent=MsG0780040529.01.T01
Chr7 exon 78820953 78821210 78820953 ID=MsG0780040529.01.T01:exon:16149;Parent=MsG0780040529.01.T01
Chr7 exon 78820371 78820522 78820371 ID=MsG0780040529.01.T01:exon:16148;Parent=MsG0780040529.01.T01
Chr7 exon 78819590 78819734 78819590 ID=MsG0780040529.01.T01:exon:16147;Parent=MsG0780040529.01.T01
Chr7 exon 78819341 78819475 78819341 ID=MsG0780040529.01.T01:exon:16146;Parent=MsG0780040529.01.T01
Chr7 exon 78819017 78819229 78819017 ID=MsG0780040529.01.T01:exon:16145;Parent=MsG0780040529.01.T01
Chr7 CDS 78824777 78824836 78824777 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78824510 78824599 78824510 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78824314 78824397 78824314 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78822721 78822908 78822721 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78821561 78821633 78821561 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78821428 78821481 78821428 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78820953 78821210 78820953 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78820371 78820522 78820371 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78819590 78819734 78819590 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78819341 78819475 78819341 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Chr7 CDS 78819017 78819229 78819017 ID=MsG0780040529.01.T01:cds;Parent=MsG0780040529.01.T01
Gene Sequence

>MsG0780040529.01.T01

ATGGGAAAGTCTCTGATCGAGTTACAATCCACAAAAGCAGATGTGCTTCCTGCTCACAAGTTTGGCACTCATGATGTTGTTGTTTTAAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGGCAAGGTGTAGTTTACAGATTAAAGGACTCGTCAATTACTGTTGCTTTTGATGATATTCCAGAAGATGGTTTAAACAGTCCCCTAAGGCTGGAAAAAGTTGCAAATGAGAAAGATGCAATTTCCAAAGCCCTATCGTCGAAGAATGTTTTCTTGCTACATGGACCTCCTGGAACGGGAAAAACTACAACAGTGGTGGAAATTATATTACAAGAAGTGAAACGTGGATCTAAGATTCTTGCTTGTGCTGCCTCAAATATTGCTGTTGACAACATCGTTGAGCGGCTAGTTCCACACAGAGTTAAGCTGGTGAGGATTGGTCATCCTGCACGTTTATTGCCTCAAGTGGTGGACAGTGCACTGGATGCCCAGGTACTTCGAGGAGATAATAGTGGTCTCGCAAATGACATTCGGAAAGAAATGAAGGTATTGAATGGAAAGCTGCTAAAAACCAAAGAAAAAAATACAAGGAGGGAGATACAGAAGGAACTTAGGACTCTATCCAGAGAAGAGCGGAAAAGGCAGCAGCTTGCTGTTACAGACGTGATTAAAACTTCAGACGTAATATTAACTACTCTGATTGGGGCTTCCTCTAAGAAACTTGGCAATACTTCATTTGATTTAGTGATTATTGACGAAGCTGCTCAAGCACTTGAGGTTGCATGCTGGATACCTCTGCTGAAGGGTACAAGATGTATACTTGCAGGAGACCATCTTCAACTTCCTCCAACGATTCAAAGTGTTGAAGCTGAGAAGAAAGGCTTAGGACAGAACCCCTTTGAAAGACTTGCAGACTGTATGGAGAGAAGTCACATCTATGCTTACTGTCCAGTACCATGTGATATGGAAGAAAAGAAAGATGAAGAAGATAGCACCCTTAATGAAGGTGAATCTGAAGTTGCTATGGCTCATGCAAAGCGATTGGTGCAAAGTGGGGTGCTTCCTTCTGATATTGGAATTATTACCCCATATGCTGCCCAGGTTGTTTTACTGAAGATGTTAAAAAACAAGGAGAACTCACTGAAGGATATTGAAATCTCAACAGTTGATGGTTTCCAGGGAAGAGAGAAGGAAGCCATTATTATATCAATGGTTCGATCAAATTCAAAAAAGGAGGTGGGCTTTCTGAGTGATCGCCGGCGAATGAATGTGGCCGTGACACGTGCAAGAAGACAATGCTGTATTGTCTGTGACACTGAGACAGTCAGTAGTGATGGATTTCTAAAGCGGTTGATTGATATTTTGAAGAGCATGGCGAATATCAGAGTGCATCCGAGTACCAGAATGAATAGGCAAAATTCCCAAAGGTTGTTAAGGTTGCTGTTATAG

Protein sequence

>MsG0780040529.01.T01

MGKSLIELQSTKADVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLVRIGHPARLLPQVVDSALDAQVLRGDNSGLANDIRKEMKVLNGKLLKTKEKNTRREIQKELRTLSREERKRQQLAVTDVIKTSDVILTTLIGASSKKLGNTSFDLVIIDEAAQALEVACWIPLLKGTRCILAGDHLQLPPTIQSVEAEKKGLGQNPFERLADCMERSHIYAYCPVPCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCIVCDTETVSSDGFLKRLIDILKSMANIRVHPSTRMNRQNSQRLLRLLL*