Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032354.01.T01 | XP_003623956.2 | 67.925 | 371 | 106 | 3 | 1 | 360 | 1 | 369 | 1.74E-168 | 485 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032354.01.T01 | G7L4M6 | 67.925 | 371 | 106 | 3 | 1 | 360 | 1 | 369 | 8.29e-169 | 485 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032354.01.T01 | MTR_7g077620 | 67.925 | 371 | 106 | 3 | 1 | 360 | 1 | 369 | 2.10e-172 | 485 |
MsG0680032354.01.T01 | MTR_7g077650 | 64.211 | 380 | 111 | 10 | 1 | 363 | 1 | 372 | 7.34e-153 | 435 |
MsG0680032354.01.T01 | MTR_7g077660 | 61.804 | 377 | 121 | 10 | 1 | 363 | 1 | 368 | 1.07e-144 | 414 |
MsG0680032354.01.T01 | MTR_1g108740 | 44.474 | 371 | 169 | 15 | 1 | 361 | 1 | 344 | 1.58e-85 | 263 |
MsG0680032354.01.T01 | MTR_7g076110 | 48.814 | 295 | 130 | 6 | 87 | 363 | 22 | 313 | 2.91e-80 | 248 |
MsG0680032354.01.T01 | MTR_7g076100 | 56.780 | 236 | 90 | 3 | 139 | 363 | 66 | 300 | 2.13e-78 | 243 |
MsG0680032354.01.T01 | MTR_7g076100 | 80.000 | 55 | 9 | 2 | 1 | 54 | 1 | 54 | 1.14e-19 | 88.6 |
MsG0680032354.01.T01 | MTR_5g038260 | 40.351 | 399 | 181 | 15 | 3 | 363 | 4 | 383 | 1.11e-73 | 233 |
MsG0680032354.01.T01 | MTR_1g064570 | 40.095 | 419 | 173 | 16 | 3 | 363 | 2 | 400 | 1.89e-72 | 231 |
MsG0680032354.01.T01 | MTR_5g038230 | 40.310 | 387 | 164 | 15 | 5 | 361 | 4 | 353 | 1.77e-69 | 222 |
MsG0680032354.01.T01 | MTR_5g082770 | 45.902 | 305 | 132 | 9 | 5 | 296 | 4 | 288 | 9.33e-69 | 218 |
MsG0680032354.01.T01 | MTR_1g016150 | 49.749 | 199 | 93 | 6 | 1 | 196 | 1 | 195 | 1.36e-53 | 177 |
MsG0680032354.01.T01 | MTR_5g082780 | 41.475 | 217 | 103 | 8 | 115 | 317 | 1 | 207 | 1.01e-32 | 122 |
MsG0680032354.01.T01 | MTR_7g076130 | 50.769 | 130 | 49 | 5 | 169 | 284 | 25 | 153 | 7.80e-27 | 104 |
MsG0680032354.01.T01 | MTR_1g108750 | 44.586 | 157 | 50 | 6 | 5 | 160 | 4 | 124 | 1.30e-22 | 92.0 |
MsG0680032354.01.T01 | MTR_3g114990 | 26.738 | 374 | 190 | 16 | 4 | 326 | 22 | 362 | 5.72e-18 | 85.1 |
MsG0680032354.01.T01 | MTR_3g114970 | 23.219 | 379 | 211 | 13 | 4 | 339 | 3 | 344 | 1.25e-14 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 80 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACTCTACGTTTACAAAT+TGG | 0.205980 | 6:-39208044 | MsG0680032354.01.T01:CDS |
AACCTCCATCCTTCGCATTA+TGG | 0.236426 | 6:+39207840 | None:intergenic |
CAACCGGATGTCACATCTTT+GGG | 0.283463 | 6:-39207789 | MsG0680032354.01.T01:CDS |
TAATTACTCGGGCTTGTAAT+CGG | 0.293843 | 6:+39208382 | None:intergenic |
GTTGAACCCGAAGCTTAAAA+TGG | 0.296182 | 6:+39208213 | None:intergenic |
TCAACCGGATGTCACATCTT+TGG | 0.300744 | 6:-39207790 | MsG0680032354.01.T01:CDS |
TTTCCAGAACAATATCATTA+TGG | 0.309110 | 6:-39208151 | MsG0680032354.01.T01:CDS |
GGAGCTACACTATACTTAAA+AGG | 0.314471 | 6:+39208457 | None:intergenic |
TTTCAACATACTTGACAGTT+TGG | 0.321503 | 6:-39207990 | MsG0680032354.01.T01:CDS |
GACATCCGGTTGAAGGAAAT+TGG | 0.322776 | 6:+39207800 | None:intergenic |
TGGATTCGTGTAAACAGATA+TGG | 0.324446 | 6:-39208298 | MsG0680032354.01.T01:CDS |
CAATGAAATGACGGTGTGTT+TGG | 0.335412 | 6:-39208539 | MsG0680032354.01.T01:CDS |
GAAGGATGGGATAATTGAAT+AGG | 0.335830 | 6:+39208565 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 6:-39208768 | MsG0680032354.01.T01:CDS |
AAAAGGATTCGCTAGTGTTA+TGG | 0.360726 | 6:+39208474 | None:intergenic |
ACACACCGTCATTTCATTGA+TGG | 0.365745 | 6:+39208543 | None:intergenic |
AGAAGGTCTACCTCTTAGTT+TGG | 0.383875 | 6:-39208806 | MsG0680032354.01.T01:CDS |
CTACGTTTACAAATTGGAAC+TGG | 0.384488 | 6:-39208038 | MsG0680032354.01.T01:CDS |
CTTTACCAATTTCCTTCAAC+CGG | 0.393860 | 6:-39207805 | MsG0680032354.01.T01:CDS |
CCATGGTTGGCTTGCATTGG+TGG | 0.402911 | 6:-39208509 | MsG0680032354.01.T01:CDS |
TTGGAGAGGTGGCAGACTAA+TGG | 0.403671 | 6:+39208435 | None:intergenic |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 6:-39207769 | MsG0680032354.01.T01:CDS |
AGGCAATGAGGAAGGTAGAT+TGG | 0.421191 | 6:-39208837 | None:intergenic |
CCTCCATAATGATATTGTTC+TGG | 0.422685 | 6:+39208148 | None:intergenic |
AAAGAGCAAGTCAATCATCT+TGG | 0.426179 | 6:-39208318 | MsG0680032354.01.T01:CDS |
AATTACTCGGGCTTGTAATC+GGG | 0.426509 | 6:+39208383 | None:intergenic |
TGGAGAGGTGGCAGACTAAT+GGG | 0.429349 | 6:+39208436 | None:intergenic |
AGTACTAGCCATCTCATAAC+AGG | 0.432398 | 6:+39208183 | None:intergenic |
GTAGATTGGGCAAATTTAGA+AGG | 0.435773 | 6:-39208823 | MsG0680032354.01.T01:CDS |
AAATTGGTAAAGATTGACTA+TGG | 0.446609 | 6:+39207816 | None:intergenic |
AATGAAATGACGGTGTGTTT+GGG | 0.468609 | 6:-39208538 | MsG0680032354.01.T01:CDS |
GGCAATGAGGAAGGTAGATT+GGG | 0.471328 | 6:-39208836 | None:intergenic |
TAGTTTGGTTCTTGAGAAGT+TGG | 0.473111 | 6:-39208791 | MsG0680032354.01.T01:CDS |
AAGGATGGGATAATTGAATA+GGG | 0.479464 | 6:+39208566 | None:intergenic |
TTGTTTCCCCAAGTTTGAAA+AGG | 0.479995 | 6:-39207915 | MsG0680032354.01.T01:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 6:-39207768 | MsG0680032354.01.T01:CDS |
TAGCCATGGTTGGCTTGCAT+TGG | 0.484269 | 6:-39208512 | MsG0680032354.01.T01:CDS |
ACCTCTCCAATCTGTTTACA+AGG | 0.490029 | 6:-39208422 | MsG0680032354.01.T01:CDS |
TTCTCAAGAACCAAACTAAG+AGG | 0.491952 | 6:+39208796 | None:intergenic |
CTGATATTTGCTGTTGGCAA+CGG | 0.495311 | 6:-39208241 | MsG0680032354.01.T01:CDS |
TCATTTCATTGATGGAAGGA+TGG | 0.502472 | 6:+39208551 | None:intergenic |
AAGATGTGACATCCGGTTGA+AGG | 0.515408 | 6:+39207793 | None:intergenic |
CAATATCATTATGGAGGGCA+TGG | 0.528364 | 6:-39208142 | MsG0680032354.01.T01:CDS |
AATCATTGAACGGAGACCTA+TGG | 0.530889 | 6:-39208108 | MsG0680032354.01.T01:CDS |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 6:+39207761 | None:intergenic |
CCAGAACAATATCATTATGG+AGG | 0.533728 | 6:-39208148 | MsG0680032354.01.T01:CDS |
GTGTGTTTGGGCGTTAGCCA+TGG | 0.536708 | 6:-39208526 | MsG0680032354.01.T01:CDS |
CAAATCCATAATGCGAAGGA+TGG | 0.544701 | 6:-39207845 | MsG0680032354.01.T01:CDS |
AAAGGTCTGATATTTGCTGT+TGG | 0.547450 | 6:-39208247 | MsG0680032354.01.T01:CDS |
CATTTCATTGATGGAAGGAT+GGG | 0.554300 | 6:+39208552 | None:intergenic |
GTTTGGGCGTTAGCCATGGT+TGG | 0.554659 | 6:-39208522 | MsG0680032354.01.T01:CDS |
AGGTAACCTTGTAAACAGAT+TGG | 0.555212 | 6:+39208416 | None:intergenic |
TATTTAATTTACGATGGCGA+TGG | 0.560307 | 6:-39207884 | MsG0680032354.01.T01:CDS |
GAACCCAAAGATGTGACATC+CGG | 0.561035 | 6:+39207786 | None:intergenic |
TTCGTGTGGTGTGCAAGACT+TGG | 0.561436 | 6:-39208744 | MsG0680032354.01.T01:CDS |
TTCAAACTTGGGGAAACAAG+AGG | 0.563350 | 6:+39207919 | None:intergenic |
TCAATTTATTTAATTTACGA+TGG | 0.567180 | 6:-39207890 | MsG0680032354.01.T01:CDS |
GTTGCAGCGATTTACAATTG+TGG | 0.569049 | 6:-39208355 | MsG0680032354.01.T01:CDS |
CAGAACAATATCATTATGGA+GGG | 0.569165 | 6:-39208147 | MsG0680032354.01.T01:CDS |
CAATTCTGCCTGTTATGAGA+TGG | 0.570742 | 6:-39208191 | MsG0680032354.01.T01:CDS |
GCTGCAACCACGTAATTACT+CGG | 0.580071 | 6:+39208370 | None:intergenic |
AGAGGATCATCAACATAGGA+TGG | 0.580233 | 6:+39208668 | None:intergenic |
TATGAGAATTATTGTATGAG+AGG | 0.586159 | 6:+39208650 | None:intergenic |
ATTATGACAGGCAATGAGGA+AGG | 0.586210 | 6:-39208845 | None:intergenic |
TCCTTCCATCAATGAAATGA+CGG | 0.587156 | 6:-39208548 | MsG0680032354.01.T01:CDS |
ACCGTCATTTCATTGATGGA+AGG | 0.592100 | 6:+39208547 | None:intergenic |
ATCCATAATGCGAAGGATGG+AGG | 0.599004 | 6:-39207842 | MsG0680032354.01.T01:CDS |
TTGTAAACAGATTGGAGAGG+TGG | 0.610040 | 6:+39208424 | None:intergenic |
AACTTGGGGAAACAAGAGGC+TGG | 0.613015 | 6:+39207923 | None:intergenic |
TATGAGAGGATCATCAACAT+AGG | 0.615056 | 6:+39208664 | None:intergenic |
GTTACAAATCCATAATGCGA+AGG | 0.615721 | 6:-39207849 | MsG0680032354.01.T01:CDS |
CTGCAACCACGTAATTACTC+GGG | 0.626596 | 6:+39208371 | None:intergenic |
AGATCATGTTAGGTTTCGTG+TGG | 0.631367 | 6:-39208758 | MsG0680032354.01.T01:CDS |
AGTTTGCATAAACGCTTGCG+AGG | 0.643052 | 6:+39208061 | None:intergenic |
TTGGAACTGGATGCTATGAG+TGG | 0.643587 | 6:-39208025 | MsG0680032354.01.T01:CDS |
TGTAATCGGGTCATCAGACA+AGG | 0.645501 | 6:+39208396 | None:intergenic |
CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 6:+39208509 | None:intergenic |
TACAAGCCCGAGTAATTACG+TGG | 0.694443 | 6:-39208377 | MsG0680032354.01.T01:CDS |
ATTGAACGGAGACCTATGGA+TGG | 0.696827 | 6:-39208104 | MsG0680032354.01.T01:CDS |
ACCTTGTAAACAGATTGGAG+AGG | 0.742777 | 6:+39208421 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAATTTATTTAATTTACGA+TGG | - | Chr6:39208705-39208724 | MsG0680032354.01.T01:CDS | 15.0% |
!!! | TTCTAAATTGATGATTTTTA+TGG | + | Chr6:39207900-39207919 | None:intergenic | 15.0% |
!!! | AACATTTTATTTGTTGGAAT+CGG | - | Chr6:39208633-39208652 | MsG0680032354.01.T01:CDS | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | - | Chr6:39208330-39208349 | MsG0680032354.01.T01:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTGT+TGG | - | Chr6:39208627-39208646 | MsG0680032354.01.T01:CDS | 20.0% |
!!! | TATTTTGTGAAATCATTGAA+CGG | - | Chr6:39208477-39208496 | MsG0680032354.01.T01:CDS | 20.0% |
! | AAATTGGTAAAGATTGACTA+TGG | + | Chr6:39208782-39208801 | None:intergenic | 25.0% |
! | TATGAGAATTATTGTATGAG+AGG | + | Chr6:39207948-39207967 | None:intergenic | 25.0% |
! | TTTCCAGAACAATATCATTA+TGG | - | Chr6:39208444-39208463 | MsG0680032354.01.T01:CDS | 25.0% |
!! | AATTGAATCCTTTTCAAACT+TGG | + | Chr6:39208691-39208710 | None:intergenic | 25.0% |
!! | ATTGAATCCTTTTCAAACTT+GGG | + | Chr6:39208690-39208709 | None:intergenic | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | Chr6:39207827-39207846 | MsG0680032354.01.T01:CDS | 30.0% | |
AAGGATGGGATAATTGAATA+GGG | + | Chr6:39208032-39208051 | None:intergenic | 30.0% | |
CAAACTCTACGTTTACAAAT+TGG | - | Chr6:39208551-39208570 | MsG0680032354.01.T01:CDS | 30.0% | |
CAGAACAATATCATTATGGA+GGG | - | Chr6:39208448-39208467 | MsG0680032354.01.T01:CDS | 30.0% | |
TTTCAACATACTTGACAGTT+TGG | - | Chr6:39208605-39208624 | MsG0680032354.01.T01:CDS | 30.0% | |
! | TATTTAATTTACGATGGCGA+TGG | - | Chr6:39208711-39208730 | MsG0680032354.01.T01:CDS | 30.0% |
! | TTGAATCCTTTTCAAACTTG+GGG | + | Chr6:39208689-39208708 | None:intergenic | 30.0% |
AAAAGGATTCGCTAGTGTTA+TGG | + | Chr6:39208124-39208143 | None:intergenic | 35.0% | |
AAAGAGCAAGTCAATCATCT+TGG | - | Chr6:39208277-39208296 | MsG0680032354.01.T01:CDS | 35.0% | |
AATGAAATGACGGTGTGTTT+GGG | - | Chr6:39208057-39208076 | MsG0680032354.01.T01:CDS | 35.0% | |
AGGTAACCTTGTAAACAGAT+TGG | + | Chr6:39208182-39208201 | None:intergenic | 35.0% | |
CATTTCATTGATGGAAGGAT+GGG | + | Chr6:39208046-39208065 | None:intergenic | 35.0% | |
CCAGAACAATATCATTATGG+AGG | - | Chr6:39208447-39208466 | MsG0680032354.01.T01:CDS | 35.0% | |
CCTCCATAATGATATTGTTC+TGG | + | Chr6:39208450-39208469 | None:intergenic | 35.0% | |
CTACGTTTACAAATTGGAAC+TGG | - | Chr6:39208557-39208576 | MsG0680032354.01.T01:CDS | 35.0% | |
CTTTACCAATTTCCTTCAAC+CGG | - | Chr6:39208790-39208809 | MsG0680032354.01.T01:CDS | 35.0% | |
GAAGGATGGGATAATTGAAT+AGG | + | Chr6:39208033-39208052 | None:intergenic | 35.0% | |
GGAGCTACACTATACTTAAA+AGG | + | Chr6:39208141-39208160 | None:intergenic | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | Chr6:39208827-39208846 | MsG0680032354.01.T01:CDS | 35.0% | |
GTAGATTGGGCAAATTTAGA+AGG | - | Chr6:39207772-39207791 | MsG0680032354.01.T01:CDS | 35.0% | |
GTTACAAATCCATAATGCGA+AGG | - | Chr6:39208746-39208765 | MsG0680032354.01.T01:CDS | 35.0% | |
TAATTACTCGGGCTTGTAAT+CGG | + | Chr6:39208216-39208235 | None:intergenic | 35.0% | |
TATGAGAGGATCATCAACAT+AGG | + | Chr6:39207934-39207953 | None:intergenic | 35.0% | |
TCATTTCATTGATGGAAGGA+TGG | + | Chr6:39208047-39208066 | None:intergenic | 35.0% | |
TCCTTCCATCAATGAAATGA+CGG | - | Chr6:39208047-39208066 | MsG0680032354.01.T01:CDS | 35.0% | |
TGGATTCGTGTAAACAGATA+TGG | - | Chr6:39208297-39208316 | MsG0680032354.01.T01:CDS | 35.0% | |
TTCTCAAGAACCAAACTAAG+AGG | + | Chr6:39207802-39207821 | None:intergenic | 35.0% | |
TTGTTTCCCCAAGTTTGAAA+AGG | - | Chr6:39208680-39208699 | MsG0680032354.01.T01:CDS | 35.0% | |
! | AACATCTTTTCACCATCCAT+AGG | + | Chr6:39208506-39208525 | None:intergenic | 35.0% |
!! | AAAGGTCTGATATTTGCTGT+TGG | - | Chr6:39208348-39208367 | MsG0680032354.01.T01:CDS | 35.0% |
!! | TAGTTTGGTTCTTGAGAAGT+TGG | - | Chr6:39207804-39207823 | MsG0680032354.01.T01:CDS | 35.0% |
AATCATTGAACGGAGACCTA+TGG | - | Chr6:39208487-39208506 | MsG0680032354.01.T01:CDS | 40.0% | |
AATTACTCGGGCTTGTAATC+GGG | + | Chr6:39208215-39208234 | None:intergenic | 40.0% | |
ACACACCGTCATTTCATTGA+TGG | + | Chr6:39208055-39208074 | None:intergenic | 40.0% | |
ACCGTCATTTCATTGATGGA+AGG | + | Chr6:39208051-39208070 | None:intergenic | 40.0% | |
ACCTCTCCAATCTGTTTACA+AGG | - | Chr6:39208173-39208192 | MsG0680032354.01.T01:CDS | 40.0% | |
ACCTTGTAAACAGATTGGAG+AGG | + | Chr6:39208177-39208196 | None:intergenic | 40.0% | |
AGAAGGTCTACCTCTTAGTT+TGG | - | Chr6:39207789-39207808 | MsG0680032354.01.T01:CDS | 40.0% | |
AGAGGATCATCAACATAGGA+TGG | + | Chr6:39207930-39207949 | None:intergenic | 40.0% | |
AGATCATGTTAGGTTTCGTG+TGG | - | Chr6:39207837-39207856 | MsG0680032354.01.T01:CDS | 40.0% | |
AGTACTAGCCATCTCATAAC+AGG | + | Chr6:39208415-39208434 | None:intergenic | 40.0% | |
CAAATCCATAATGCGAAGGA+TGG | - | Chr6:39208750-39208769 | MsG0680032354.01.T01:CDS | 40.0% | |
CAATATCATTATGGAGGGCA+TGG | - | Chr6:39208453-39208472 | MsG0680032354.01.T01:CDS | 40.0% | |
CAATGAAATGACGGTGTGTT+TGG | - | Chr6:39208056-39208075 | MsG0680032354.01.T01:CDS | 40.0% | |
CAATTCTGCCTGTTATGAGA+TGG | - | Chr6:39208404-39208423 | MsG0680032354.01.T01:CDS | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | Chr6:39208826-39208845 | MsG0680032354.01.T01:CDS | 40.0% | |
GTTGAACCCGAAGCTTAAAA+TGG | + | Chr6:39208385-39208404 | None:intergenic | 40.0% | |
GTTGCAGCGATTTACAATTG+TGG | - | Chr6:39208240-39208259 | MsG0680032354.01.T01:CDS | 40.0% | |
TTCAAACTTGGGGAAACAAG+AGG | + | Chr6:39208679-39208698 | None:intergenic | 40.0% | |
TTGTAAACAGATTGGAGAGG+TGG | + | Chr6:39208174-39208193 | None:intergenic | 40.0% | |
! | GAGACACCATTTTAAGCTTC+GGG | - | Chr6:39208376-39208395 | MsG0680032354.01.T01:CDS | 40.0% |
! | GGAGACACCATTTTAAGCTT+CGG | - | Chr6:39208375-39208394 | MsG0680032354.01.T01:CDS | 40.0% |
!! | CTGATATTTGCTGTTGGCAA+CGG | - | Chr6:39208354-39208373 | MsG0680032354.01.T01:CDS | 40.0% |
AACCTCCATCCTTCGCATTA+TGG | + | Chr6:39208758-39208777 | None:intergenic | 45.0% | |
AAGATGTGACATCCGGTTGA+AGG | + | Chr6:39208805-39208824 | None:intergenic | 45.0% | |
AGTTTGCATAAACGCTTGCG+AGG | + | Chr6:39208537-39208556 | None:intergenic | 45.0% | |
ATCCATAATGCGAAGGATGG+AGG | - | Chr6:39208753-39208772 | MsG0680032354.01.T01:CDS | 45.0% | |
ATTGAACGGAGACCTATGGA+TGG | - | Chr6:39208491-39208510 | MsG0680032354.01.T01:CDS | 45.0% | |
CAACCGGATGTCACATCTTT+GGG | - | Chr6:39208806-39208825 | MsG0680032354.01.T01:CDS | 45.0% | |
CTGCAACCACGTAATTACTC+GGG | + | Chr6:39208227-39208246 | None:intergenic | 45.0% | |
GAACCCAAAGATGTGACATC+CGG | + | Chr6:39208812-39208831 | None:intergenic | 45.0% | |
GACATCCGGTTGAAGGAAAT+TGG | + | Chr6:39208798-39208817 | None:intergenic | 45.0% | |
GCTGCAACCACGTAATTACT+CGG | + | Chr6:39208228-39208247 | None:intergenic | 45.0% | |
TACAAGCCCGAGTAATTACG+TGG | - | Chr6:39208218-39208237 | MsG0680032354.01.T01:CDS | 45.0% | |
TCAACCGGATGTCACATCTT+TGG | - | Chr6:39208805-39208824 | MsG0680032354.01.T01:CDS | 45.0% | |
TGTAATCGGGTCATCAGACA+AGG | + | Chr6:39208202-39208221 | None:intergenic | 45.0% | |
TTGGAACTGGATGCTATGAG+TGG | - | Chr6:39208570-39208589 | MsG0680032354.01.T01:CDS | 45.0% | |
AACTTGGGGAAACAAGAGGC+TGG | + | Chr6:39208675-39208694 | None:intergenic | 50.0% | |
TGGAGAGGTGGCAGACTAAT+GGG | + | Chr6:39208162-39208181 | None:intergenic | 50.0% | |
TTCGTGTGGTGTGCAAGACT+TGG | - | Chr6:39207851-39207870 | MsG0680032354.01.T01:CDS | 50.0% | |
TTGGAGAGGTGGCAGACTAA+TGG | + | Chr6:39208163-39208182 | None:intergenic | 50.0% | |
!! | TAGCCATGGTTGGCTTGCAT+TGG | - | Chr6:39208083-39208102 | MsG0680032354.01.T01:CDS | 50.0% |
CCACCAATGCAAGCCAACCA+TGG | + | Chr6:39208089-39208108 | None:intergenic | 55.0% | |
GTGTGTTTGGGCGTTAGCCA+TGG | - | Chr6:39208069-39208088 | MsG0680032354.01.T01:CDS | 55.0% | |
GTTTGGGCGTTAGCCATGGT+TGG | - | Chr6:39208073-39208092 | MsG0680032354.01.T01:CDS | 55.0% | |
!! | CCATGGTTGGCTTGCATTGG+TGG | - | Chr6:39208086-39208105 | MsG0680032354.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 39207763 | 39208854 | 39207763 | ID=MsG0680032354.01;Name=MsG0680032354.01 |
Chr6 | mRNA | 39207763 | 39208854 | 39207763 | ID=MsG0680032354.01.T01;Parent=MsG0680032354.01;Name=MsG0680032354.01.T01;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|363 |
Chr6 | exon | 39207763 | 39208854 | 39207763 | ID=MsG0680032354.01.T01:exon:21352;Parent=MsG0680032354.01.T01 |
Chr6 | CDS | 39207763 | 39208854 | 39207763 | ID=MsG0680032354.01.T01:cds;Parent=MsG0680032354.01.T01 |
Gene Sequence |
Protein sequence |