Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037366.01.T01 | RHN46952.1 | 69.554 | 381 | 105 | 2 | 1 | 381 | 1 | 370 | 0 | 520 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037366.01.T01 | A0A396H0R6 | 69.554 | 381 | 105 | 2 | 1 | 381 | 1 | 370 | 0.0 | 520 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037366.01.T01 | MTR_7g077620 | 69.554 | 381 | 105 | 2 | 1 | 381 | 1 | 370 | 0.0 | 519 |
MsG0780037366.01.T01 | MTR_7g077660 | 62.435 | 386 | 124 | 8 | 1 | 383 | 1 | 368 | 2.26e-155 | 442 |
MsG0780037366.01.T01 | MTR_7g077650 | 62.564 | 390 | 121 | 9 | 1 | 383 | 1 | 372 | 7.94e-155 | 441 |
MsG0780037366.01.T01 | MTR_7g076110 | 52.980 | 302 | 130 | 6 | 85 | 383 | 21 | 313 | 5.03e-97 | 291 |
MsG0780037366.01.T01 | MTR_7g076100 | 60.593 | 236 | 86 | 3 | 149 | 383 | 71 | 300 | 3.49e-84 | 258 |
MsG0780037366.01.T01 | MTR_7g076100 | 80.000 | 50 | 10 | 0 | 4 | 53 | 5 | 54 | 1.95e-19 | 88.2 |
MsG0780037366.01.T01 | MTR_1g108740 | 40.921 | 391 | 174 | 15 | 1 | 381 | 1 | 344 | 1.09e-77 | 243 |
MsG0780037366.01.T01 | MTR_5g038260 | 39.356 | 404 | 202 | 17 | 1 | 383 | 2 | 383 | 5.12e-74 | 235 |
MsG0780037366.01.T01 | MTR_5g082770 | 46.645 | 313 | 133 | 9 | 5 | 311 | 4 | 288 | 1.33e-72 | 228 |
MsG0780037366.01.T01 | MTR_1g064570 | 39.202 | 426 | 187 | 18 | 3 | 383 | 2 | 400 | 5.29e-70 | 225 |
MsG0780037366.01.T01 | MTR_5g038230 | 38.987 | 395 | 178 | 17 | 5 | 381 | 4 | 353 | 3.51e-69 | 222 |
MsG0780037366.01.T01 | MTR_1g016150 | 44.076 | 211 | 106 | 6 | 1 | 208 | 1 | 202 | 7.93e-49 | 165 |
MsG0780037366.01.T01 | MTR_7g076130 | 54.839 | 124 | 55 | 1 | 174 | 296 | 25 | 148 | 1.74e-37 | 133 |
MsG0780037366.01.T01 | MTR_5g082780 | 39.241 | 237 | 116 | 9 | 115 | 342 | 2 | 219 | 5.52e-36 | 131 |
MsG0780037366.01.T01 | MTR_1g108750 | 39.506 | 162 | 56 | 5 | 5 | 165 | 4 | 124 | 1.80e-22 | 92.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 83 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGAGCAAGCCAGTTATTT+TGG | 0.117905 | 7:-24343091 | MsG0780037366.01.T01:CDS |
TTTCGAGAACCATATTCTTA+TGG | 0.218648 | 7:-24342891 | MsG0780037366.01.T01:CDS |
TCAACCAGATATTACATCTT+TGG | 0.230598 | 7:-24342518 | MsG0780037366.01.T01:CDS |
ACCATCAAAACCATCAATTT+AGG | 0.236137 | 7:-24343490 | MsG0780037366.01.T01:CDS |
CAAAGTCGACATTTACAAAT+TGG | 0.240256 | 7:-24342787 | MsG0780037366.01.T01:CDS |
GTCAATGATTTCACAAAATA+AGG | 0.277114 | 7:+24342864 | None:intergenic |
AATATCTGGTTGAAGGAAAT+TGG | 0.282521 | 7:+24342528 | None:intergenic |
ACCTCTCGATTCTGTCTATA+AGG | 0.300786 | 7:-24343213 | MsG0780037366.01.T01:CDS |
TTCGAGAACCATATTCTTAT+GGG | 0.302184 | 7:-24342890 | MsG0780037366.01.T01:CDS |
GGAGCTACACTATACTTAAA+AGG | 0.314471 | 7:+24343248 | None:intergenic |
TAGTTTGGTTCTTGACAAAT+TGG | 0.317439 | 7:-24343579 | MsG0780037366.01.T01:CDS |
CATCGAAAGTAAAATGTGTT+TGG | 0.318111 | 7:-24343330 | MsG0780037366.01.T01:CDS |
CAACCAGATATTACATCTTT+GGG | 0.327223 | 7:-24342517 | MsG0780037366.01.T01:CDS |
TTCTCATAGTAGGCAAAATT+AGG | 0.338194 | 7:+24342936 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7:-24343556 | MsG0780037366.01.T01:CDS |
TAAGGATACCCATAAGAATA+TGG | 0.351097 | 7:+24342882 | None:intergenic |
CAGCAATGACGAAGGTTGAT+TGG | 0.361038 | 7:-24343625 | None:intergenic |
TAATCACTTGGGCTTGTAAC+GGG | 0.365353 | 7:+24343155 | None:intergenic |
TAAGGTTACCTTTGTCGATA+AGG | 0.369302 | 7:-24343195 | MsG0780037366.01.T01:CDS |
AGAAGGTCTACCTCTTAGTT+TGG | 0.378617 | 7:-24343594 | MsG0780037366.01.T01:CDS |
GTACATGAACCCAAAATAAC+TGG | 0.382067 | 7:+24343081 | None:intergenic |
TCGAGAGGTGGCAGAGTAAT+GGG | 0.385113 | 7:+24343227 | None:intergenic |
CAAGGGGCAGACACAGATAT+TGG | 0.387303 | 7:+24342678 | None:intergenic |
AAGGATGGGATAACTGAATA+AGG | 0.387431 | 7:+24343357 | None:intergenic |
ATCGAAAGTAAAATGTGTTT+GGG | 0.391537 | 7:-24343329 | MsG0780037366.01.T01:CDS |
GGGTTCTACCACAATTTCAA+TGG | 0.406178 | 7:-24342497 | MsG0780037366.01.T01:CDS |
CGACATTTACAAATTGGAAC+TGG | 0.414635 | 7:-24342781 | MsG0780037366.01.T01:CDS |
CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7:-24343551 | MsG0780037366.01.T01:CDS |
GAACCCAAAGATGTAATATC+TGG | 0.421266 | 7:+24342514 | None:intergenic |
GTTGATTGGGCAACTTTAGA+AGG | 0.422572 | 7:-24343611 | MsG0780037366.01.T01:CDS |
GCCATGGTTGGCTTGCACTA+GGG | 0.425720 | 7:-24343301 | MsG0780037366.01.T01:CDS |
GTACATTAATCCTAAATTGA+TGG | 0.438583 | 7:+24343480 | None:intergenic |
ACAAGCCATCTTCTCATAGT+AGG | 0.448914 | 7:+24342926 | None:intergenic |
TACTTTCGATGATGGAAGGA+TGG | 0.472218 | 7:+24343342 | None:intergenic |
TTGTGTGTATGCGATAATAT+CGG | 0.477556 | 7:+24343432 | None:intergenic |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7:-24342496 | MsG0780037366.01.T01:CDS |
AGCAATGACGAAGGTTGATT+GGG | 0.481605 | 7:-24343624 | None:intergenic |
ATCGAGAGGTGGCAGAGTAA+TGG | 0.485102 | 7:+24343226 | None:intergenic |
AGCCATGGTTGGCTTGCACT+AGG | 0.490479 | 7:-24343302 | MsG0780037366.01.T01:CDS |
TTGTTTCTCCAAGTTAGAAA+AGG | 0.491686 | 7:-24342658 | MsG0780037366.01.T01:CDS |
AAGATGTAATATCTGGTTGA+AGG | 0.492433 | 7:+24342521 | None:intergenic |
AGGAGGATTGTTGAACTTGA+AGG | 0.496507 | 7:+24342977 | None:intergenic |
TTGGTGTGGTGTGCAAGAAT+TGG | 0.497007 | 7:-24343532 | MsG0780037366.01.T01:CDS |
ATGCTAATTGCTGAAGGCTA+CGG | 0.515407 | 7:-24343014 | MsG0780037366.01.T01:CDS |
TTGTCAAGAACCAAACTAAG+AGG | 0.517195 | 7:+24343584 | None:intergenic |
CCATGGTTGGCTTGCACTAG+GGG | 0.523513 | 7:-24343300 | MsG0780037366.01.T01:CDS |
AATCATTGACTGGAGACATA+TGG | 0.524535 | 7:-24342851 | MsG0780037366.01.T01:CDS |
ACTTTCGATGATGGAAGGAT+GGG | 0.524692 | 7:+24343343 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.525529 | 7:-24343150 | MsG0780037366.01.T01:CDS |
GATCAATCCCATTGAAATTG+TGG | 0.531759 | 7:+24342489 | None:intergenic |
ATAATCACTTGGGCTTGTAA+CGG | 0.539349 | 7:+24343154 | None:intergenic |
CAGATCTATAATGCGAAGGA+TGG | 0.546339 | 7:-24342573 | MsG0780037366.01.T01:CDS |
GCTGCAACCACATAATCACT+TGG | 0.549128 | 7:+24343143 | None:intergenic |
GTTTGGGCTATAGCCATGGT+TGG | 0.562036 | 7:-24343313 | MsG0780037366.01.T01:CDS |
GGATCGTTTGAGTCATCAGA+AGG | 0.579857 | 7:+24342957 | None:intergenic |
TGTAACGGGGTCAGCAGACA+AGG | 0.583913 | 7:+24343169 | None:intergenic |
AAAAGCATGCTAATTGCTGA+AGG | 0.588450 | 7:-24343020 | MsG0780037366.01.T01:CDS |
TGGAACTGGACGCTCAGAGT+GGG | 0.590330 | 7:-24342767 | MsG0780037366.01.T01:CDS |
TTTCTAACTTGGAGAAACAA+GGG | 0.603773 | 7:+24342661 | None:intergenic |
CCCCTAGTGCAAGCCAACCA+TGG | 0.607857 | 7:+24343300 | None:intergenic |
TGGTGTGCAAGAATTGGCAA+TGG | 0.611628 | 7:-24343526 | MsG0780037366.01.T01:CDS |
GTTACAGATCTATAATGCGA+AGG | 0.615721 | 7:-24342577 | MsG0780037366.01.T01:CDS |
GGTGTGCAAGAATTGGCAAT+GGG | 0.623893 | 7:-24343525 | MsG0780037366.01.T01:CDS |
TTCTAACTTGGAGAAACAAG+GGG | 0.628076 | 7:+24342662 | None:intergenic |
TCTGAGAGGATCATCAACAT+AGG | 0.636274 | 7:+24343455 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.636696 | 7:+24343144 | None:intergenic |
CAAGGTAACCTTATCGACAA+AGG | 0.637366 | 7:+24343187 | None:intergenic |
AATCACTTGGGCTTGTAACG+GGG | 0.640349 | 7:+24343156 | None:intergenic |
GTTGAACTTGAAGGATACAA+TGG | 0.640816 | 7:+24342986 | None:intergenic |
TCGTTTGAGTCATCAGAAGG+AGG | 0.641501 | 7:+24342960 | None:intergenic |
ATGTGTTTGGGCTATAGCCA+TGG | 0.642964 | 7:-24343317 | MsG0780037366.01.T01:CDS |
GCATACACACAAAATCAAAG+AGG | 0.645979 | 7:-24343421 | MsG0780037366.01.T01:CDS |
TGCGATAATATCGGTCTGAG+AGG | 0.660838 | 7:+24343441 | None:intergenic |
AGATCATGTTAGGTTTGGTG+TGG | 0.661894 | 7:-24343546 | MsG0780037366.01.T01:CDS |
GAGAGGATCATCAACATAGG+TGG | 0.668596 | 7:+24343458 | None:intergenic |
ACTGGACGCTCAGAGTGGGA+AGG | 0.669283 | 7:-24342763 | MsG0780037366.01.T01:CDS |
GTTGCAGCGATATACAATTG+TGG | 0.681283 | 7:-24343128 | MsG0780037366.01.T01:CDS |
GATGGCGGCAAAGATGATTG+CGG | 0.684187 | 7:-24342615 | MsG0780037366.01.T01:CDS |
TTACTTATCAGCAATGACGA+AGG | 0.689200 | 7:-24343633 | None:intergenic |
TTGGAACTGGACGCTCAGAG+TGG | 0.693009 | 7:-24342768 | MsG0780037366.01.T01:CDS |
ATTGACTGGAGACATATGGA+TGG | 0.700403 | 7:-24342847 | MsG0780037366.01.T01:CDS |
TTATAGACAGAATCGAGAGG+TGG | 0.705860 | 7:+24343215 | None:intergenic |
ACCTTATAGACAGAATCGAG+AGG | 0.707446 | 7:+24343212 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCAATTTATTTTATTACTGA+TGG | - | Chr7:24343478-24343497 | MsG0780037366.01.T01:CDS | 15.0% |
!!! | ATTTATTTTATTACTGATGG+CGG | - | Chr7:24343481-24343500 | MsG0780037366.01.T01:CDS | 20.0% |
!!! | GAAAACAACATTTTATTTCT+CGG | - | Chr7:24343400-24343419 | MsG0780037366.01.T01:CDS | 20.0% |
! | ATCGAAAGTAAAATGTGTTT+GGG | - | Chr7:24342782-24342801 | MsG0780037366.01.T01:CDS | 25.0% |
! | ATTCAAAAAACTTGAGAGTT+TGG | - | Chr7:24343378-24343397 | MsG0780037366.01.T01:CDS | 25.0% |
! | GTACATTAATCCTAAATTGA+TGG | + | Chr7:24342634-24342653 | None:intergenic | 25.0% |
! | GTCAATGATTTCACAAAATA+AGG | + | Chr7:24343250-24343269 | None:intergenic | 25.0% |
! | TATGGTTCTCGAAAAAAATA+TGG | + | Chr7:24343214-24343233 | None:intergenic | 25.0% |
!! | AATTGAATCCTTTTCTAACT+TGG | + | Chr7:24343464-24343483 | None:intergenic | 25.0% |
!! | TATTTTGTGAAATCATTGAC+TGG | - | Chr7:24343250-24343269 | MsG0780037366.01.T01:CDS | 25.0% |
!!! | AACATTTTATTTCTCGGAAT+CGG | - | Chr7:24343406-24343425 | MsG0780037366.01.T01:CDS | 25.0% |
AAGAACACATAGATCATGTT+AGG | - | Chr7:24342555-24342574 | MsG0780037366.01.T01:CDS | 30.0% | |
AAGATGTAATATCTGGTTGA+AGG | + | Chr7:24343593-24343612 | None:intergenic | 30.0% | |
AATATCTGGTTGAAGGAAAT+TGG | + | Chr7:24343586-24343605 | None:intergenic | 30.0% | |
ACCATCAAAACCATCAATTT+AGG | - | Chr7:24342621-24342640 | MsG0780037366.01.T01:CDS | 30.0% | |
CAAAGTCGACATTTACAAAT+TGG | - | Chr7:24343324-24343343 | MsG0780037366.01.T01:CDS | 30.0% | |
CAACCAGATATTACATCTTT+GGG | - | Chr7:24343594-24343613 | MsG0780037366.01.T01:CDS | 30.0% | |
CATCGAAAGTAAAATGTGTT+TGG | - | Chr7:24342781-24342800 | MsG0780037366.01.T01:CDS | 30.0% | |
TAAGGATACCCATAAGAATA+TGG | + | Chr7:24343232-24343251 | None:intergenic | 30.0% | |
TCAACCAGATATTACATCTT+TGG | - | Chr7:24343593-24343612 | MsG0780037366.01.T01:CDS | 30.0% | |
TTCGAGAACCATATTCTTAT+GGG | - | Chr7:24343221-24343240 | MsG0780037366.01.T01:CDS | 30.0% | |
TTCTCATAGTAGGCAAAATT+AGG | + | Chr7:24343178-24343197 | None:intergenic | 30.0% | |
TTGTGTGTATGCGATAATAT+CGG | + | Chr7:24342682-24342701 | None:intergenic | 30.0% | |
TTTCGAGAACCATATTCTTA+TGG | - | Chr7:24343220-24343239 | MsG0780037366.01.T01:CDS | 30.0% | |
TTTCTAACTTGGAGAAACAA+GGG | + | Chr7:24343453-24343472 | None:intergenic | 30.0% | |
! | ACACATTTTACTTTCGATGA+TGG | + | Chr7:24342780-24342799 | None:intergenic | 30.0% |
! | TTGTTTCTCCAAGTTAGAAA+AGG | - | Chr7:24343453-24343472 | MsG0780037366.01.T01:CDS | 30.0% |
! | TTTTCTAACTTGGAGAAACA+AGG | + | Chr7:24343454-24343473 | None:intergenic | 30.0% |
!! | TAGTTTGGTTCTTGACAAAT+TGG | - | Chr7:24342532-24342551 | MsG0780037366.01.T01:CDS | 30.0% |
!!! | ATTTTACTTTCGATGATGGA+AGG | + | Chr7:24342776-24342795 | None:intergenic | 30.0% |
!!! | TCCTAAATTGATGGTTTTGA+TGG | + | Chr7:24342625-24342644 | None:intergenic | 30.0% |
AAGGATGGGATAACTGAATA+AGG | + | Chr7:24342757-24342776 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+CGG | + | Chr7:24342960-24342979 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | - | Chr7:24342560-24342579 | MsG0780037366.01.T01:CDS | 35.0% | |
CGACATTTACAAATTGGAAC+TGG | - | Chr7:24343330-24343349 | MsG0780037366.01.T01:CDS | 35.0% | |
GAACCCAAAGATGTAATATC+TGG | + | Chr7:24343600-24343619 | None:intergenic | 35.0% | |
GCATACACACAAAATCAAAG+AGG | - | Chr7:24342690-24342709 | MsG0780037366.01.T01:CDS | 35.0% | |
GGAGCTACACTATACTTAAA+AGG | + | Chr7:24342866-24342885 | None:intergenic | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | - | Chr7:24343615-24343634 | MsG0780037366.01.T01:CDS | 35.0% | |
GTACATGAACCCAAAATAAC+TGG | + | Chr7:24343033-24343052 | None:intergenic | 35.0% | |
GTTACAGATCTATAATGCGA+AGG | - | Chr7:24343534-24343553 | MsG0780037366.01.T01:CDS | 35.0% | |
GTTGAACTTGAAGGATACAA+TGG | + | Chr7:24343128-24343147 | None:intergenic | 35.0% | |
TAAGGTTACCTTTGTCGATA+AGG | - | Chr7:24342916-24342935 | MsG0780037366.01.T01:CDS | 35.0% | |
TTCTAACTTGGAGAAACAAG+GGG | + | Chr7:24343452-24343471 | None:intergenic | 35.0% | |
TTGTCAAGAACCAAACTAAG+AGG | + | Chr7:24342530-24342549 | None:intergenic | 35.0% | |
! | AAAAGCATGCTAATTGCTGA+AGG | - | Chr7:24343091-24343110 | MsG0780037366.01.T01:CDS | 35.0% |
! | AAAGAGCAAGCCAGTTATTT+TGG | - | Chr7:24343020-24343039 | MsG0780037366.01.T01:CDS | 35.0% |
! | AATCATTGACTGGAGACATA+TGG | - | Chr7:24343260-24343279 | MsG0780037366.01.T01:CDS | 35.0% |
! | TTTTGCCTACTATGAGAAGA+TGG | - | Chr7:24343180-24343199 | MsG0780037366.01.T01:CDS | 35.0% |
!! | AAGAGCAAGCCAGTTATTTT+GGG | - | Chr7:24343021-24343040 | MsG0780037366.01.T01:CDS | 35.0% |
ACAAGCCATCTTCTCATAGT+AGG | + | Chr7:24343188-24343207 | None:intergenic | 40.0% | |
ACCTCTCGATTCTGTCTATA+AGG | - | Chr7:24342898-24342917 | MsG0780037366.01.T01:CDS | 40.0% | |
ACCTTATAGACAGAATCGAG+AGG | + | Chr7:24342902-24342921 | None:intergenic | 40.0% | |
AGAAGGTCTACCTCTTAGTT+TGG | - | Chr7:24342517-24342536 | MsG0780037366.01.T01:CDS | 40.0% | |
AGGAGGATTGTTGAACTTGA+AGG | + | Chr7:24343137-24343156 | None:intergenic | 40.0% | |
ATGCTAATTGCTGAAGGCTA+CGG | - | Chr7:24343097-24343116 | MsG0780037366.01.T01:CDS | 40.0% | |
ATTGACTGGAGACATATGGA+TGG | - | Chr7:24343264-24343283 | MsG0780037366.01.T01:CDS | 40.0% | |
CAAGGTAACCTTATCGACAA+AGG | + | Chr7:24342927-24342946 | None:intergenic | 40.0% | |
CAGATCTATAATGCGAAGGA+TGG | - | Chr7:24343538-24343557 | MsG0780037366.01.T01:CDS | 40.0% | |
CTGCAACCACATAATCACTT+GGG | + | Chr7:24342970-24342989 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | - | Chr7:24343614-24343633 | MsG0780037366.01.T01:CDS | 40.0% | |
GTTGATTGGGCAACTTTAGA+AGG | - | Chr7:24342500-24342519 | MsG0780037366.01.T01:CDS | 40.0% | |
GTTGCAGCGATATACAATTG+TGG | - | Chr7:24342983-24343002 | MsG0780037366.01.T01:CDS | 40.0% | |
TAATCACTTGGGCTTGTAAC+GGG | + | Chr7:24342959-24342978 | None:intergenic | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | - | Chr7:24342961-24342980 | MsG0780037366.01.T01:CDS | 40.0% | |
TCTGAGAGGATCATCAACAT+AGG | + | Chr7:24342659-24342678 | None:intergenic | 40.0% | |
TTATAGACAGAATCGAGAGG+TGG | + | Chr7:24342899-24342918 | None:intergenic | 40.0% | |
!! | ACTTTCGATGATGGAAGGAT+GGG | + | Chr7:24342771-24342790 | None:intergenic | 40.0% |
!! | AGATCATGTTAGGTTTGGTG+TGG | - | Chr7:24342565-24342584 | MsG0780037366.01.T01:CDS | 40.0% |
!! | TACTTTCGATGATGGAAGGA+TGG | + | Chr7:24342772-24342791 | None:intergenic | 40.0% |
AATCACTTGGGCTTGTAACG+GGG | + | Chr7:24342958-24342977 | None:intergenic | 45.0% | |
ATGTGTTTGGGCTATAGCCA+TGG | - | Chr7:24342794-24342813 | MsG0780037366.01.T01:CDS | 45.0% | |
GAGAGGATCATCAACATAGG+TGG | + | Chr7:24342656-24342675 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | + | Chr7:24342971-24342990 | None:intergenic | 45.0% | |
GGATCGTTTGAGTCATCAGA+AGG | + | Chr7:24343157-24343176 | None:intergenic | 45.0% | |
GGTGTGCAAGAATTGGCAAT+GGG | - | Chr7:24342586-24342605 | MsG0780037366.01.T01:CDS | 45.0% | |
TCGTTTGAGTCATCAGAAGG+AGG | + | Chr7:24343154-24343173 | None:intergenic | 45.0% | |
TGCGATAATATCGGTCTGAG+AGG | + | Chr7:24342673-24342692 | None:intergenic | 45.0% | |
TGGTGTGCAAGAATTGGCAA+TGG | - | Chr7:24342585-24342604 | MsG0780037366.01.T01:CDS | 45.0% | |
TTGGTGTGGTGTGCAAGAAT+TGG | - | Chr7:24342579-24342598 | MsG0780037366.01.T01:CDS | 45.0% | |
ATCGAGAGGTGGCAGAGTAA+TGG | + | Chr7:24342888-24342907 | None:intergenic | 50.0% | |
CAAGGGGCAGACACAGATAT+TGG | + | Chr7:24343436-24343455 | None:intergenic | 50.0% | |
GTTTGGGCTATAGCCATGGT+TGG | - | Chr7:24342798-24342817 | MsG0780037366.01.T01:CDS | 50.0% | |
TCGAGAGGTGGCAGAGTAAT+GGG | + | Chr7:24342887-24342906 | None:intergenic | 50.0% | |
! | GATGGCGGCAAAGATGATTG+CGG | - | Chr7:24343496-24343515 | MsG0780037366.01.T01:CDS | 50.0% |
TGGAACTGGACGCTCAGAGT+GGG | - | Chr7:24343344-24343363 | MsG0780037366.01.T01:CDS | 55.0% | |
TTGGAACTGGACGCTCAGAG+TGG | - | Chr7:24343343-24343362 | MsG0780037366.01.T01:CDS | 55.0% | |
! | TGTAACGGGGTCAGCAGACA+AGG | + | Chr7:24342945-24342964 | None:intergenic | 55.0% |
!! | AGCCATGGTTGGCTTGCACT+AGG | - | Chr7:24342809-24342828 | MsG0780037366.01.T01:CDS | 55.0% |
!! | CCATGGTTGGCTTGCACTAG+GGG | - | Chr7:24342811-24342830 | MsG0780037366.01.T01:CDS | 55.0% |
!! | GCCATGGTTGGCTTGCACTA+GGG | - | Chr7:24342810-24342829 | MsG0780037366.01.T01:CDS | 55.0% |
ACTGGACGCTCAGAGTGGGA+AGG | - | Chr7:24343348-24343367 | MsG0780037366.01.T01:CDS | 60.0% | |
CCCCTAGTGCAAGCCAACCA+TGG | + | Chr7:24342814-24342833 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 24342491 | 24343642 | 24342491 | ID=MsG0780037366.01;Name=MsG0780037366.01 |
Chr7 | mRNA | 24342491 | 24343642 | 24342491 | ID=MsG0780037366.01.T01;Parent=MsG0780037366.01;Name=MsG0780037366.01.T01;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|383 |
Chr7 | exon | 24342491 | 24343642 | 24342491 | ID=MsG0780037366.01.T01:exon:5902;Parent=MsG0780037366.01.T01 |
Chr7 | CDS | 24342491 | 24343642 | 24342491 | ID=MsG0780037366.01.T01:cds;Parent=MsG0780037366.01.T01 |
Gene Sequence |
Protein sequence |