Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039690.01.T01 | XP_003623956.2 | 95.068 | 365 | 18 | 0 | 1 | 365 | 1 | 365 | 0 | 716 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039690.01.T01 | A0A396H0R6 | 95.068 | 365 | 18 | 0 | 1 | 365 | 1 | 365 | 0.0 | 716 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039690.01.T01 | MTR_7g077620 | 95.068 | 365 | 18 | 0 | 1 | 365 | 1 | 365 | 0.0 | 716 |
| MsG0780039690.01.T01 | MTR_7g077660 | 69.811 | 371 | 98 | 8 | 1 | 366 | 1 | 362 | 1.79e-170 | 482 |
| MsG0780039690.01.T01 | MTR_7g077650 | 68.097 | 373 | 105 | 7 | 1 | 366 | 1 | 366 | 1.76e-166 | 472 |
| MsG0780039690.01.T01 | MTR_7g076110 | 54.828 | 290 | 120 | 5 | 85 | 366 | 21 | 307 | 1.29e-95 | 289 |
| MsG0780039690.01.T01 | MTR_7g076100 | 64.935 | 231 | 79 | 2 | 137 | 366 | 65 | 294 | 3.32e-95 | 288 |
| MsG0780039690.01.T01 | MTR_7g076100 | 75.926 | 54 | 12 | 1 | 1 | 53 | 1 | 54 | 3.67e-20 | 90.5 |
| MsG0780039690.01.T01 | MTR_1g108740 | 45.000 | 360 | 156 | 15 | 1 | 349 | 1 | 329 | 5.36e-81 | 253 |
| MsG0780039690.01.T01 | MTR_5g038260 | 42.781 | 374 | 166 | 14 | 3 | 348 | 4 | 357 | 3.06e-79 | 250 |
| MsG0780039690.01.T01 | MTR_5g038230 | 41.734 | 369 | 147 | 13 | 5 | 348 | 4 | 329 | 1.07e-75 | 239 |
| MsG0780039690.01.T01 | MTR_5g082770 | 46.302 | 311 | 131 | 7 | 5 | 305 | 4 | 288 | 6.49e-72 | 228 |
| MsG0780039690.01.T01 | MTR_1g064570 | 39.952 | 413 | 179 | 18 | 3 | 366 | 2 | 394 | 3.06e-70 | 227 |
| MsG0780039690.01.T01 | MTR_1g016150 | 48.187 | 193 | 93 | 5 | 1 | 188 | 1 | 191 | 1.09e-48 | 166 |
| MsG0780039690.01.T01 | MTR_7g076130 | 61.290 | 124 | 47 | 1 | 168 | 290 | 25 | 148 | 1.69e-43 | 149 |
| MsG0780039690.01.T01 | MTR_5g082780 | 43.231 | 229 | 94 | 10 | 114 | 327 | 1 | 208 | 1.85e-38 | 139 |
| MsG0780039690.01.T01 | MTR_1g108750 | 44.872 | 156 | 50 | 4 | 5 | 159 | 4 | 124 | 2.55e-26 | 103 |
| MsG0780039690.01.T01 | MTR_3g114970 | 26.738 | 374 | 199 | 17 | 4 | 347 | 3 | 331 | 1.05e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCAGAAGAATATTATTA+TGG | 0.194741 | 7:+67599884 | MsG0780039690.01.T01:CDS |
| TATTCTTCTGGAAAATTATA+TGG | 0.217616 | 7:-67599875 | None:intergenic |
| TTCTCAAGGTAAGTAAAATT+AGG | 0.221508 | 7:-67599839 | None:intergenic |
| TCAAGAGGATGTTACATCTT+TGG | 0.236048 | 7:+67600242 | MsG0780039690.01.T01:CDS |
| AGTCTCTTGTTGCTTAAATA+TGG | 0.248276 | 7:-67600542 | None:intergenic |
| GTTGCAGCGATTTACAATTT+TGG | 0.255211 | 7:+67599647 | MsG0780039690.01.T01:CDS |
| TTCCCATAATAATATTCTTC+TGG | 0.264764 | 7:-67599887 | None:intergenic |
| AACATCCTCTTGAAGGAAAT+TGG | 0.274037 | 7:-67600232 | None:intergenic |
| ATTAAAAGTAAAACATGTTT+AGG | 0.274585 | 7:+67599464 | MsG0780039690.01.T01:CDS |
| CAAGAGGATGTTACATCTTT+GGG | 0.279656 | 7:+67600243 | MsG0780039690.01.T01:CDS |
| GGAGCTATACTGCTCTTAAA+AGG | 0.328493 | 7:-67599545 | None:intergenic |
| TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7:-67599620 | None:intergenic |
| TTCCAGAAGAATATTATTAT+GGG | 0.343297 | 7:+67599885 | MsG0780039690.01.T01:CDS |
| AAGAACACATAGATCATGTT+AGG | 0.348741 | 7:+67599237 | MsG0780039690.01.T01:CDS |
| GAAGGATGGGATAAATGAAT+AGG | 0.361300 | 7:-67599437 | None:intergenic |
| CTCTAGTCCACCGTGACAAT+TGG | 0.364795 | 7:-67600462 | None:intergenic |
| TCTCAAGGTAAGTAAAATTA+GGG | 0.370039 | 7:-67599838 | None:intergenic |
| TTCGAGATGTGGCAGACTAA+TGG | 0.372397 | 7:-67599567 | None:intergenic |
| AGATTGCTACCCTCTTAGTT+TGG | 0.376216 | 7:+67599199 | MsG0780039690.01.T01:CDS |
| AAAAGGATTCACTAGAGTTA+TGG | 0.411464 | 7:-67599528 | None:intergenic |
| CACATAGATCATGTTAGGTT+TGG | 0.419733 | 7:+67599242 | MsG0780039690.01.T01:CDS |
| TAGCAATGAGAAAGGTAGAT+TGG | 0.422043 | 7:+67599168 | None:intergenic |
| AGGAGGATTGTTGAATTTGA+AGG | 0.434909 | 7:-67599798 | None:intergenic |
| TCGAGATGTGGCAGACTAAT+GGG | 0.436341 | 7:-67599566 | None:intergenic |
| AAGATGTAACATCCTCTTGA+AGG | 0.440096 | 7:-67600239 | None:intergenic |
| CCATGGTTGGCTTGCACTAG+TGG | 0.460763 | 7:+67599493 | MsG0780039690.01.T01:CDS |
| TAGTTTGGTTCTTGATGAGT+TGG | 0.469456 | 7:+67599214 | MsG0780039690.01.T01:CDS |
| AAGGATGGGATAAATGAATA+GGG | 0.470406 | 7:-67599436 | None:intergenic |
| ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7:-67599621 | None:intergenic |
| AGCAATGAGAAAGGTAGATT+GGG | 0.477990 | 7:+67599169 | None:intergenic |
| TTGTTTCTCAAAGTTTGAAA+AGG | 0.480128 | 7:+67600117 | MsG0780039690.01.T01:CDS |
| TCATCAAGAACCAAACTAAG+AGG | 0.484268 | 7:-67599209 | None:intergenic |
| AATCATTGACCGGAGACATA+TGG | 0.484616 | 7:+67599924 | MsG0780039690.01.T01:CDS |
| ATCAAAGAGGAAGATGAAAT+CGG | 0.490865 | 7:+67599385 | MsG0780039690.01.T01:CDS |
| TTATGAAGGCTTGGTATTTG+CGG | 0.493109 | 7:+67599751 | MsG0780039690.01.T01:CDS |
| GTTTAGGTTGTAGCCATGGT+TGG | 0.497773 | 7:+67599480 | MsG0780039690.01.T01:CDS |
| TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7:+67599625 | MsG0780039690.01.T01:CDS |
| ATAGGGTACTCTTTCTCACT+TGG | 0.511489 | 7:-67599419 | None:intergenic |
| CTTTACCAATTTCCTTCAAG+AGG | 0.512890 | 7:+67600227 | MsG0780039690.01.T01:CDS |
| CTAACTTCATCTCAGAAGCT+TGG | 0.515942 | 7:-67600492 | None:intergenic |
| CAAATCTATAATGCGAAGGA+TGG | 0.523156 | 7:+67600187 | MsG0780039690.01.T01:CDS |
| TTTCACCATCCATATGTCTC+CGG | 0.527974 | 7:-67599933 | None:intergenic |
| TACGAGACAATTTGTTTGAG+AGG | 0.528949 | 7:-67599352 | None:intergenic |
| TTTGAGAGGATCATTAACAT+AGG | 0.529450 | 7:-67599338 | None:intergenic |
| GCTGCAACCACATAATCACT+TGG | 0.549128 | 7:-67599632 | None:intergenic |
| ACATGTTTAGGTTGTAGCCA+TGG | 0.559363 | 7:+67599476 | MsG0780039690.01.T01:CDS |
| TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7:-67599606 | None:intergenic |
| TTGGTGTGGTGTGCAAGAGT+TGG | 0.569193 | 7:+67599261 | MsG0780039690.01.T01:CDS |
| AGTTTGTATGTAAGATTGTG+TGG | 0.574270 | 7:-67599971 | None:intergenic |
| TTCAAACTTTGAGAAACAAG+CGG | 0.575958 | 7:-67600113 | None:intergenic |
| ATGGTCTCTATCGCAAAACA+TGG | 0.578960 | 7:-67600523 | None:intergenic |
| TTGTTGAGAGATTCGAGATG+TGG | 0.590451 | 7:-67599578 | None:intergenic |
| TAGGGTACTCTTTCTCACTT+GGG | 0.591906 | 7:-67599418 | None:intergenic |
| GAGTACTAGCTATCTTCTCA+AGG | 0.600472 | 7:-67599853 | None:intergenic |
| AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7:-67599619 | None:intergenic |
| TTATTCTGATCCAATTGTCA+CGG | 0.612141 | 7:+67600452 | MsG0780039690.01.T01:CDS |
| CATCAAGAACCAAACTAAGA+GGG | 0.615506 | 7:-67599208 | None:intergenic |
| GTTACAAATCTATAATGCGA+AGG | 0.615721 | 7:+67600183 | MsG0780039690.01.T01:CDS |
| CCACTAGTGCAAGCCAACCA+TGG | 0.620481 | 7:-67599493 | None:intergenic |
| CTGCAACCACATAATCACTT+GGG | 0.636696 | 7:-67599631 | None:intergenic |
| GTTTGTATGTAAGATTGTGT+GGG | 0.646089 | 7:-67599970 | None:intergenic |
| GAGAGGATCATTAACATAGG+TGG | 0.648255 | 7:-67599335 | None:intergenic |
| AGATCATGTTAGGTTTGGTG+TGG | 0.661894 | 7:+67599247 | MsG0780039690.01.T01:CDS |
| TTCTGATCCAATTGTCACGG+TGG | 0.670128 | 7:+67600455 | MsG0780039690.01.T01:CDS |
| ACATCTCGAATCTCTCAACA+AGG | 0.689831 | 7:+67599580 | MsG0780039690.01.T01:CDS |
| GGGTCAACTGAGTCATCACA+AGG | 0.692971 | 7:-67599818 | None:intergenic |
| ATTGACCGGAGACATATGGA+TGG | 0.696827 | 7:+67599928 | MsG0780039690.01.T01:CDS |
| TTGGAAATGGACGCCCAGAG+CGG | 0.711159 | 7:+67600007 | MsG0780039690.01.T01:CDS |
| GTAGACGTGCAAAATCAAAG+AGG | 0.713785 | 7:+67599372 | MsG0780039690.01.T01:CDS |
| TCAACTGAGTCATCACAAGG+AGG | 0.756246 | 7:-67599815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTATTTTATTTATGA+TGG | + | Chr7:67600142-67600161 | MsG0780039690.01.T01:CDS | 10.0% |
| !! | ATGAAAAATTAATCATTGAA+GGG | - | Chr7:67600332-67600351 | None:intergenic | 15.0% |
| !! | ATTAAAAGTAAAACATGTTT+AGG | + | Chr7:67599464-67599483 | MsG0780039690.01.T01:CDS | 15.0% |
| !! | ACCATAAAAATCATCAATTT+AGG | + | Chr7:67599303-67599322 | MsG0780039690.01.T01:CDS | 20.0% |
| !! | CATGAAAAATTAATCATTGA+AGG | - | Chr7:67600333-67600352 | None:intergenic | 20.0% |
| !! | GAAAAAGCAAATTAATCATA+AGG | - | Chr7:67600614-67600633 | None:intergenic | 20.0% |
| !! | TTCCAGAAGAATATTATTAT+GGG | + | Chr7:67599885-67599904 | MsG0780039690.01.T01:CDS | 20.0% |
| !! | TTTCCAGAAGAATATTATTA+TGG | + | Chr7:67599884-67599903 | MsG0780039690.01.T01:CDS | 20.0% |
| !!! | AACATTTTATTTGTAGGAAT+CGG | + | Chr7:67600070-67600089 | MsG0780039690.01.T01:CDS | 20.0% |
| !!! | ACATGTTTTACTTTTAATGA+TGG | - | Chr7:67599462-67599481 | None:intergenic | 20.0% |
| !!! | TATTCTTCTGGAAAATTATA+TGG | - | Chr7:67599878-67599897 | None:intergenic | 20.0% |
| !!! | TCCTAAATTGATGATTTTTA+TGG | - | Chr7:67599307-67599326 | None:intergenic | 20.0% |
| !!! | TTTGTCAATATTGATGATAA+AGG | - | Chr7:67600358-67600377 | None:intergenic | 20.0% |
| ! | TCTCAAGGTAAGTAAAATTA+GGG | - | Chr7:67599841-67599860 | None:intergenic | 25.0% |
| ! | TTCCCATAATAATATTCTTC+TGG | - | Chr7:67599890-67599909 | None:intergenic | 25.0% |
| ! | TTCTCAAGGTAAGTAAAATT+AGG | - | Chr7:67599842-67599861 | None:intergenic | 25.0% |
| !! | ACTAATGTTGTGTTTTATGA+AGG | + | Chr7:67599737-67599756 | MsG0780039690.01.T01:CDS | 25.0% |
| !! | TATTTTGTGAAATCATTGAC+CGG | + | Chr7:67599914-67599933 | MsG0780039690.01.T01:CDS | 25.0% |
| !! | TTGTTTCTCAAAGTTTGAAA+AGG | + | Chr7:67600117-67600136 | MsG0780039690.01.T01:CDS | 25.0% |
| !!! | GAGAACAACATTTTATTTGT+AGG | + | Chr7:67600064-67600083 | MsG0780039690.01.T01:CDS | 25.0% |
| !!! | GTTTTACTTTTAATGATGGA+AGG | - | Chr7:67599458-67599477 | None:intergenic | 25.0% |
| AAAAGGATTCACTAGAGTTA+TGG | - | Chr7:67599531-67599550 | None:intergenic | 30.0% | |
| AAGAACACATAGATCATGTT+AGG | + | Chr7:67599237-67599256 | MsG0780039690.01.T01:CDS | 30.0% | |
| AAGGATGGGATAAATGAATA+GGG | - | Chr7:67599439-67599458 | None:intergenic | 30.0% | |
| AGATCAATCCCATTGAAATT+GGG | - | Chr7:67600275-67600294 | None:intergenic | 30.0% | |
| AGTTTGTATGTAAGATTGTG+TGG | - | Chr7:67599974-67599993 | None:intergenic | 30.0% | |
| ATCAAAGAGGAAGATGAAAT+CGG | + | Chr7:67599385-67599404 | MsG0780039690.01.T01:CDS | 30.0% | |
| ATCAGAATAACCTATACACA+TGG | - | Chr7:67600442-67600461 | None:intergenic | 30.0% | |
| GTTACAAATCTATAATGCGA+AGG | + | Chr7:67600183-67600202 | MsG0780039690.01.T01:CDS | 30.0% | |
| GTTTGTATGTAAGATTGTGT+GGG | - | Chr7:67599973-67599992 | None:intergenic | 30.0% | |
| TTATTCTGATCCAATTGTCA+CGG | + | Chr7:67600452-67600471 | MsG0780039690.01.T01:CDS | 30.0% | |
| TTTGAGAGGATCATTAACAT+AGG | - | Chr7:67599341-67599360 | None:intergenic | 30.0% | |
| ! | AGTCTCTTGTTGCTTAAATA+TGG | - | Chr7:67600545-67600564 | None:intergenic | 30.0% |
| ! | CAAACTCTACGTTTTCAAAT+TGG | + | Chr7:67599988-67600007 | MsG0780039690.01.T01:CDS | 30.0% |
| ! | CTACGTTTTCAAATTGGAAA+TGG | + | Chr7:67599994-67600013 | MsG0780039690.01.T01:CDS | 30.0% |
| ! | TTCAAACTTTGAGAAACAAG+CGG | - | Chr7:67600116-67600135 | None:intergenic | 30.0% |
| !! | ACTTTTAATGATGGAAGGAT+GGG | - | Chr7:67599453-67599472 | None:intergenic | 30.0% |
| !! | TACTTTTAATGATGGAAGGA+TGG | - | Chr7:67599454-67599473 | None:intergenic | 30.0% |
| AACATCCTCTTGAAGGAAAT+TGG | - | Chr7:67600235-67600254 | None:intergenic | 35.0% | |
| AAGATGTAACATCCTCTTGA+AGG | - | Chr7:67600242-67600261 | None:intergenic | 35.0% | |
| AGGAGGATTGTTGAATTTGA+AGG | - | Chr7:67599801-67599820 | None:intergenic | 35.0% | |
| ATAATCACTTGGGCTTGTAA+TGG | - | Chr7:67599624-67599643 | None:intergenic | 35.0% | |
| CAAATCTATAATGCGAAGGA+TGG | + | Chr7:67600187-67600206 | MsG0780039690.01.T01:CDS | 35.0% | |
| CAAGAGGATGTTACATCTTT+GGG | + | Chr7:67600243-67600262 | MsG0780039690.01.T01:CDS | 35.0% | |
| CACATAGATCATGTTAGGTT+TGG | + | Chr7:67599242-67599261 | MsG0780039690.01.T01:CDS | 35.0% | |
| CAGATCAATCCCATTGAAAT+TGG | - | Chr7:67600276-67600295 | None:intergenic | 35.0% | |
| CATCAAGAACCAAACTAAGA+GGG | - | Chr7:67599211-67599230 | None:intergenic | 35.0% | |
| CTTTACCAATTTCCTTCAAG+AGG | + | Chr7:67600227-67600246 | MsG0780039690.01.T01:CDS | 35.0% | |
| GAAGGATGGGATAAATGAAT+AGG | - | Chr7:67599440-67599459 | None:intergenic | 35.0% | |
| GATCAATCCCATTGAAATTG+GGG | - | Chr7:67600274-67600293 | None:intergenic | 35.0% | |
| TAATCACTTGGGCTTGTAAT+GGG | - | Chr7:67599623-67599642 | None:intergenic | 35.0% | |
| TCAAGAGGATGTTACATCTT+TGG | + | Chr7:67600242-67600261 | MsG0780039690.01.T01:CDS | 35.0% | |
| TCATCAAGAACCAAACTAAG+AGG | - | Chr7:67599212-67599231 | None:intergenic | 35.0% | |
| ! | CCTGACAATCAAAAAGTACA+AGG | - | Chr7:67600570-67600589 | None:intergenic | 35.0% |
| ! | GTTGCAGCGATTTACAATTT+TGG | + | Chr7:67599647-67599666 | MsG0780039690.01.T01:CDS | 35.0% |
| ! | TACGAGACAATTTGTTTGAG+AGG | - | Chr7:67599355-67599374 | None:intergenic | 35.0% |
| ! | TGTTGTGTTTTATGAAGGCT+TGG | + | Chr7:67599742-67599761 | MsG0780039690.01.T01:CDS | 35.0% |
| ! | TTATGAAGGCTTGGTATTTG+CGG | + | Chr7:67599751-67599770 | MsG0780039690.01.T01:CDS | 35.0% |
| !! | CCTTGTACTTTTTGATTGTC+AGG | + | Chr7:67600567-67600586 | MsG0780039690.01.T01:CDS | 35.0% |
| !! | TAGTTTGGTTCTTGATGAGT+TGG | + | Chr7:67599214-67599233 | MsG0780039690.01.T01:CDS | 35.0% |
| !! | TCTGTTGATTCCATGTGTAT+AGG | + | Chr7:67600429-67600448 | MsG0780039690.01.T01:intron | 35.0% |
| AATCACTTGGGCTTGTAATG+GGG | - | Chr7:67599622-67599641 | None:intergenic | 40.0% | |
| AATCATTGACCGGAGACATA+TGG | + | Chr7:67599924-67599943 | MsG0780039690.01.T01:CDS | 40.0% | |
| ACATCTCGAATCTCTCAACA+AGG | + | Chr7:67599580-67599599 | MsG0780039690.01.T01:CDS | 40.0% | |
| AGATTGCTACCCTCTTAGTT+TGG | + | Chr7:67599199-67599218 | MsG0780039690.01.T01:CDS | 40.0% | |
| ATCTCAGCAAGCAGCATAAA+AGG | - | Chr7:67600390-67600409 | None:intergenic | 40.0% | |
| ATGGTCTCTATCGCAAAACA+TGG | - | Chr7:67600526-67600545 | None:intergenic | 40.0% | |
| CTAACTTCATCTCAGAAGCT+TGG | - | Chr7:67600495-67600514 | None:intergenic | 40.0% | |
| CTGCAACCACATAATCACTT+GGG | - | Chr7:67599634-67599653 | None:intergenic | 40.0% | |
| GAGAGGATCATTAACATAGG+TGG | - | Chr7:67599338-67599357 | None:intergenic | 40.0% | |
| GAGTACTAGCTATCTTCTCA+AGG | - | Chr7:67599856-67599875 | None:intergenic | 40.0% | |
| GATCTGTTCATCTTTGCGTT+AGG | + | Chr7:67600290-67600309 | MsG0780039690.01.T01:intron | 40.0% | |
| GGAGCTATACTGCTCTTAAA+AGG | - | Chr7:67599548-67599567 | None:intergenic | 40.0% | |
| GGTTCTACCCCAATTTCAAT+GGG | + | Chr7:67600264-67600283 | MsG0780039690.01.T01:intron | 40.0% | |
| GTAGACGTGCAAAATCAAAG+AGG | + | Chr7:67599372-67599391 | MsG0780039690.01.T01:CDS | 40.0% | |
| TACAAGCCCAAGTGATTATG+TGG | + | Chr7:67599625-67599644 | MsG0780039690.01.T01:CDS | 40.0% | |
| TTGTTGAGAGATTCGAGATG+TGG | - | Chr7:67599581-67599600 | None:intergenic | 40.0% | |
| TTTCACCATCCATATGTCTC+CGG | - | Chr7:67599936-67599955 | None:intergenic | 40.0% | |
| ! | AAAGAGCAAGCCAGTCTTTT+TGG | + | Chr7:67599684-67599703 | MsG0780039690.01.T01:CDS | 40.0% |
| ! | ATAGGGTACTCTTTCTCACT+TGG | - | Chr7:67599422-67599441 | None:intergenic | 40.0% |
| ! | TAGGGTACTCTTTCTCACTT+GGG | - | Chr7:67599421-67599440 | None:intergenic | 40.0% |
| ! | TTGTTCAACTTTTCCGCTCT+GGG | - | Chr7:67600023-67600042 | None:intergenic | 40.0% |
| ! | TTTATGCTGCTTGCTGAGAT+TGG | + | Chr7:67600390-67600409 | MsG0780039690.01.T01:intron | 40.0% |
| ! | TTTGTTCAACTTTTCCGCTC+TGG | - | Chr7:67600024-67600043 | None:intergenic | 40.0% |
| !! | ACATGTTTAGGTTGTAGCCA+TGG | + | Chr7:67599476-67599495 | MsG0780039690.01.T01:CDS | 40.0% |
| !! | AGATCATGTTAGGTTTGGTG+TGG | + | Chr7:67599247-67599266 | MsG0780039690.01.T01:CDS | 40.0% |
| ATTGACCGGAGACATATGGA+TGG | + | Chr7:67599928-67599947 | MsG0780039690.01.T01:CDS | 45.0% | |
| CTGCACGAATCCAAAAAGAC+TGG | - | Chr7:67599697-67599716 | None:intergenic | 45.0% | |
| GCTGCAACCACATAATCACT+TGG | - | Chr7:67599635-67599654 | None:intergenic | 45.0% | |
| GGGTTCTACCCCAATTTCAA+TGG | + | Chr7:67600263-67600282 | MsG0780039690.01.T01:intron | 45.0% | |
| TCAACTGAGTCATCACAAGG+AGG | - | Chr7:67599818-67599837 | None:intergenic | 45.0% | |
| TCGAGATGTGGCAGACTAAT+GGG | - | Chr7:67599569-67599588 | None:intergenic | 45.0% | |
| TTCGAGATGTGGCAGACTAA+TGG | - | Chr7:67599570-67599589 | None:intergenic | 45.0% | |
| TTCTGATCCAATTGTCACGG+TGG | + | Chr7:67600455-67600474 | MsG0780039690.01.T01:CDS | 45.0% | |
| !! | GTTTAGGTTGTAGCCATGGT+TGG | + | Chr7:67599480-67599499 | MsG0780039690.01.T01:CDS | 45.0% |
| CTCTAGTCCACCGTGACAAT+TGG | - | Chr7:67600465-67600484 | None:intergenic | 50.0% | |
| GGGTCAACTGAGTCATCACA+AGG | - | Chr7:67599821-67599840 | None:intergenic | 50.0% | |
| TTGGTGTGGTGTGCAAGAGT+TGG | + | Chr7:67599261-67599280 | MsG0780039690.01.T01:CDS | 50.0% | |
| ! | TGTAATGGGGTCAGCAGACA+AGG | - | Chr7:67599609-67599628 | None:intergenic | 50.0% |
| CCACTAGTGCAAGCCAACCA+TGG | - | Chr7:67599496-67599515 | None:intergenic | 55.0% | |
| TTGGAAATGGACGCCCAGAG+CGG | + | Chr7:67600007-67600026 | MsG0780039690.01.T01:CDS | 55.0% | |
| !! | CCATGGTTGGCTTGCACTAG+TGG | + | Chr7:67599493-67599512 | MsG0780039690.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 67599173 | 67600749 | 67599173 | ID=MsG0780039690.01;Name=MsG0780039690.01 |
| Chr7 | mRNA | 67599173 | 67600749 | 67599173 | ID=MsG0780039690.01.T01;Parent=MsG0780039690.01;Name=MsG0780039690.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0.5|1|0|0|2|131|419 |
| Chr7 | exon | 67599173 | 67600264 | 67599173 | ID=MsG0780039690.01.T01:exon:11422;Parent=MsG0780039690.01.T01 |
| Chr7 | exon | 67600451 | 67600749 | 67600451 | ID=MsG0780039690.01.T01:exon:11423;Parent=MsG0780039690.01.T01 |
| Chr7 | CDS | 67599173 | 67600264 | 67599173 | ID=MsG0780039690.01.T01:cds;Parent=MsG0780039690.01.T01 |
| Chr7 | CDS | 67600451 | 67600618 | 67600451 | ID=MsG0780039690.01.T01:cds;Parent=MsG0780039690.01.T01 |
| Chr7 | three_prime_UTR | 67600619 | 67600749 | 67600619 | ID=MsG0780039690.01.T01:three_prime_utr;Parent=MsG0780039690.01.T01 |
| Gene Sequence |
| Protein sequence |
