Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039689.01.T01 | XP_003623956.2 | 72.118 | 373 | 96 | 5 | 1 | 368 | 1 | 370 | 0 | 526 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039689.01.T01 | A0A396H0R6 | 72.118 | 373 | 96 | 5 | 1 | 368 | 1 | 370 | 0.0 | 526 |
MsG0780039689.01.T01 | G7L4M6 | 72.118 | 373 | 96 | 5 | 1 | 368 | 1 | 370 | 0.0 | 526 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039689.01.T01 | MTR_7g077620 | 72.118 | 373 | 96 | 5 | 1 | 368 | 1 | 370 | 0.0 | 526 |
MsG0780039689.01.T01 | MTR_7g077660 | 69.437 | 373 | 106 | 6 | 1 | 370 | 1 | 368 | 2.39e-173 | 487 |
MsG0780039689.01.T01 | MTR_7g077650 | 68.063 | 382 | 100 | 7 | 1 | 370 | 1 | 372 | 1.48e-171 | 483 |
MsG0780039689.01.T01 | MTR_7g076110 | 58.725 | 298 | 109 | 7 | 82 | 370 | 21 | 313 | 7.19e-109 | 321 |
MsG0780039689.01.T01 | MTR_7g076100 | 64.854 | 239 | 77 | 5 | 135 | 370 | 66 | 300 | 1.06e-94 | 285 |
MsG0780039689.01.T01 | MTR_7g076100 | 81.481 | 54 | 9 | 1 | 1 | 53 | 1 | 54 | 4.46e-22 | 95.5 |
MsG0780039689.01.T01 | MTR_5g038260 | 43.358 | 399 | 176 | 14 | 3 | 370 | 4 | 383 | 5.29e-89 | 273 |
MsG0780039689.01.T01 | MTR_1g108740 | 46.649 | 373 | 165 | 14 | 1 | 368 | 1 | 344 | 6.88e-89 | 271 |
MsG0780039689.01.T01 | MTR_5g038230 | 41.772 | 395 | 154 | 14 | 5 | 368 | 4 | 353 | 1.70e-80 | 250 |
MsG0780039689.01.T01 | MTR_5g082770 | 47.097 | 310 | 127 | 9 | 5 | 302 | 4 | 288 | 1.78e-74 | 233 |
MsG0780039689.01.T01 | MTR_1g064570 | 41.007 | 417 | 179 | 19 | 3 | 370 | 2 | 400 | 7.47e-73 | 232 |
MsG0780039689.01.T01 | MTR_1g016150 | 52.486 | 181 | 78 | 6 | 1 | 175 | 1 | 179 | 2.26e-51 | 171 |
MsG0780039689.01.T01 | MTR_7g076130 | 64.286 | 126 | 40 | 3 | 165 | 287 | 25 | 148 | 1.94e-45 | 153 |
MsG0780039689.01.T01 | MTR_5g082780 | 40.789 | 228 | 104 | 8 | 111 | 326 | 1 | 209 | 6.75e-38 | 136 |
MsG0780039689.01.T01 | MTR_1g108750 | 49.673 | 153 | 44 | 5 | 5 | 156 | 4 | 124 | 6.01e-27 | 103 |
MsG0780039689.01.T01 | MTR_3g114970 | 25.000 | 376 | 205 | 16 | 4 | 347 | 3 | 333 | 1.07e-16 | 80.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 78 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGGTGATAAGAAGTATTT+AGG | 0.155147 | 7:+67591248 | MsG0780039689.01.T01:CDS |
CAAACTCCATGTTTACAAAT+TGG | 0.204599 | 7:+67591073 | MsG0780039689.01.T01:CDS |
AAAGACCAAGCCAATCATTT+TGG | 0.213606 | 7:+67590769 | MsG0780039689.01.T01:CDS |
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7:-67590927 | None:intergenic |
TGAAAGCGAGAAAACTAAAA+AGG | 0.276479 | 7:-67590746 | None:intergenic |
AATAAACAAACTTGAGAGTT+TGG | 0.296170 | 7:+67591127 | MsG0780039689.01.T01:CDS |
GGCGGTACACTATACTTAAA+AGG | 0.310810 | 7:-67590630 | None:intergenic |
CATTGAAAGTAAAACTTGTA+TGG | 0.329804 | 7:+67590548 | MsG0780039689.01.T01:CDS |
TAATCACTTGGGCTTGTAAT+GGG | 0.338599 | 7:-67590705 | None:intergenic |
AAAAGGATTCACTAGTGTTA+TGG | 0.340587 | 7:-67590613 | None:intergenic |
GAAGGATGGGATATCTGAAT+AGG | 0.346154 | 7:-67590522 | None:intergenic |
AAGAACACATAGATCATGTT+AGG | 0.348741 | 7:+67590331 | MsG0780039689.01.T01:CDS |
AGAAGCCTATCCTCTTAGTT+TGG | 0.368073 | 7:+67590293 | MsG0780039689.01.T01:CDS |
CTCCAAGTTGGAAAAGGATT+CGG | 0.375437 | 7:+67591211 | MsG0780039689.01.T01:CDS |
TTCGAGAGGTGGCAGACTAA+TGG | 0.384467 | 7:-67590652 | None:intergenic |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7:-67590926 | None:intergenic |
CCATGGTTGGCTTGCATTGG+TGG | 0.397590 | 7:+67590578 | MsG0780039689.01.T01:CDS |
CACATAGATCATGTTAGGTT+TGG | 0.400301 | 7:+67590336 | MsG0780039689.01.T01:CDS |
CCATGTTTACAAATTGGAAC+TGG | 0.402360 | 7:+67591079 | MsG0780039689.01.T01:CDS |
AGCCTCTTGTTTCTCCAAGT+TGG | 0.404761 | 7:+67591199 | MsG0780039689.01.T01:CDS |
GGGTTCTACCACAATTTCAA+TGG | 0.408660 | 7:+67591351 | MsG0780039689.01.T01:CDS |
AAGGTGATAAGAAGTATTTA+GGG | 0.434866 | 7:+67591249 | MsG0780039689.01.T01:CDS |
TTGTTTCTCCAAGTTGGAAA+AGG | 0.437802 | 7:+67591205 | MsG0780039689.01.T01:CDS |
TCGAGAGGTGGCAGACTAAT+GGG | 0.438780 | 7:-67590651 | None:intergenic |
CTACATGACTCCAAAATGAT+TGG | 0.451480 | 7:-67590779 | None:intergenic |
TGATGATCCTCTCACACAAT+TGG | 0.457972 | 7:+67590439 | MsG0780039689.01.T01:CDS |
TAGCCATGGTTGGCTTGCAT+TGG | 0.461010 | 7:+67590575 | MsG0780039689.01.T01:CDS |
TACTTTCAATGATGGAAGGA+TGG | 0.467120 | 7:-67590536 | None:intergenic |
TAGCAATGAGGAAGGTAGAC+TGG | 0.468564 | 7:+67590262 | None:intergenic |
ATGTGAAGGATGGAAGCTTT+CGG | 0.471634 | 7:+67591285 | MsG0780039689.01.T01:CDS |
ATAATCACTTGGGCTTGTAA+TGG | 0.476686 | 7:-67590706 | None:intergenic |
TAGTTTGGTTCTTGATAAGT+TGG | 0.478359 | 7:+67590308 | MsG0780039689.01.T01:CDS |
GGTTCTACCACAATTTCAAT+GGG | 0.480142 | 7:+67591352 | MsG0780039689.01.T01:CDS |
AAGGATGGGATATCTGAATA+GGG | 0.489334 | 7:-67590521 | None:intergenic |
AGGAGGATTGTTAAGCTTGA+AGG | 0.497543 | 7:-67590886 | None:intergenic |
TACAAGCCCAAGTGATTATG+TGG | 0.499442 | 7:+67590710 | MsG0780039689.01.T01:CDS |
GTATGGGCTGTAGCCATGGT+TGG | 0.500293 | 7:+67590565 | MsG0780039689.01.T01:CDS |
ACTTTCAATGATGGAAGGAT+GGG | 0.503431 | 7:-67590535 | None:intergenic |
TATTTCGTGAAATCATTGAC+TGG | 0.505540 | 7:+67591005 | MsG0780039689.01.T01:CDS |
GAGATCTATAATGTGAAGGA+TGG | 0.509549 | 7:+67591275 | MsG0780039689.01.T01:CDS |
CCAGTTCCAATTTGTAAACA+TGG | 0.513473 | 7:-67591079 | None:intergenic |
TTATCAAGAACCAAACTAAG+AGG | 0.515747 | 7:-67590303 | None:intergenic |
CGGCTATAATAAGATTGCTC+TGG | 0.516174 | 7:-67590975 | None:intergenic |
ATTGAAAGTAAAACTTGTAT+GGG | 0.524490 | 7:+67590549 | MsG0780039689.01.T01:CDS |
AATCATTGACTGGAGACATA+TGG | 0.524535 | 7:+67591015 | MsG0780039689.01.T01:CDS |
GCTGCAACCACATAATCACT+TGG | 0.531804 | 7:-67590717 | None:intergenic |
TTGGAACTGGATGTCCAGAA+TGG | 0.546513 | 7:+67591092 | MsG0780039689.01.T01:CDS |
CTCTTTCTTAGCAATGAGGA+AGG | 0.560180 | 7:+67590254 | None:intergenic |
AAGAACCAAACTAAGAGGAT+AGG | 0.560965 | 7:-67590298 | None:intergenic |
TGCATTCGCTCGAAGGAAAG+TGG | 0.562548 | 7:-67591320 | None:intergenic |
TTGGTATTTGCCAACAGTGA+CGG | 0.565522 | 7:+67590849 | MsG0780039689.01.T01:CDS |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7:-67590691 | None:intergenic |
TGACTCCAAAATGATTGGCT+TGG | 0.571542 | 7:-67590774 | None:intergenic |
GGTCAATCCCATTGAAATTG+TGG | 0.574786 | 7:-67591359 | None:intergenic |
TATTAGACCAATTGTGTGAG+AGG | 0.586952 | 7:-67590446 | None:intergenic |
CTGCAACCACATAATCACTT+GGG | 0.596035 | 7:-67590716 | None:intergenic |
TTCCAACTTGGAGAAACAAG+AGG | 0.597328 | 7:-67591201 | None:intergenic |
TTGGTCTAATATATCAAAGA+CGG | 0.599837 | 7:+67590458 | MsG0780039689.01.T01:CDS |
GTTAGAGATCTATAATGTGA+AGG | 0.603732 | 7:+67591271 | MsG0780039689.01.T01:CDS |
TTGTTGAGAGATTCGAGAGG+TGG | 0.604059 | 7:-67590663 | None:intergenic |
AATCACTTGGGCTTGTAATG+GGG | 0.606028 | 7:-67590704 | None:intergenic |
AACTTGGAGAAACAAGAGGC+TGG | 0.606698 | 7:-67591197 | None:intergenic |
AATAGTGTCTCCGTCACTGT+TGG | 0.610668 | 7:-67590859 | None:intergenic |
AGCAATGAGGAAGGTAGACT+GGG | 0.614849 | 7:+67590263 | None:intergenic |
TGTGAGAGGATCATCAACAT+AGG | 0.620354 | 7:-67590432 | None:intergenic |
ACTTGTATGGGCTGTAGCCA+TGG | 0.624505 | 7:+67590561 | MsG0780039689.01.T01:CDS |
AGATCATGTTAGGTTTGGCG+TGG | 0.628602 | 7:+67590341 | MsG0780039689.01.T01:CDS |
GGGTCATTTGAGTCATCACA+AGG | 0.644746 | 7:-67590906 | None:intergenic |
ACCTCTCGAATCTCTCAACA+AGG | 0.651432 | 7:+67590665 | MsG0780039689.01.T01:CDS |
TTGGCGTGGTGTGCAAGACA+TGG | 0.662910 | 7:+67590355 | MsG0780039689.01.T01:CDS |
CCACCAATGCAAGCCAACCA+TGG | 0.665097 | 7:-67590578 | None:intergenic |
ATGATTTCACGAAATAAGCA+CGG | 0.674470 | 7:-67590998 | None:intergenic |
GAGAGGATCATCAACATAGG+TGG | 0.682169 | 7:-67590429 | None:intergenic |
ATTGACTGGAGACATATGGA+TGG | 0.700403 | 7:+67591019 | MsG0780039689.01.T01:CDS |
TCATTTGAGTCATCACAAGG+AGG | 0.722989 | 7:-67590903 | None:intergenic |
AGAGGTGGCAGACTAATGGG+CGG | 0.746430 | 7:-67590648 | None:intergenic |
ACCTTGTTGAGAGATTCGAG+AGG | 0.768126 | 7:-67590666 | None:intergenic |
ATTTCACGAAATAAGCACGG+CGG | 0.813610 | 7:-67590995 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCATAAAAATCATCAATTT+AGG | + | Chr7:67590397-67590416 | MsG0780039689.01.T01:CDS | 20.0% |
!! | ATTGAAAGTAAAACTTGTAT+GGG | + | Chr7:67590549-67590568 | MsG0780039689.01.T01:CDS | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | - | Chr7:67590929-67590948 | None:intergenic | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | - | Chr7:67590930-67590949 | None:intergenic | 20.0% |
!!! | ACTGATGTTGTATTTTATAA+AGG | + | Chr7:67590825-67590844 | MsG0780039689.01.T01:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | - | Chr7:67590401-67590420 | None:intergenic | 20.0% |
! | AATAAACAAACTTGAGAGTT+TGG | + | Chr7:67591127-67591146 | MsG0780039689.01.T01:CDS | 25.0% |
! | CATTGAAAGTAAAACTTGTA+TGG | + | Chr7:67590548-67590567 | MsG0780039689.01.T01:CDS | 25.0% |
! | TTGGTCTAATATATCAAAGA+CGG | + | Chr7:67590458-67590477 | MsG0780039689.01.T01:CDS | 25.0% |
!! | ACAAGTTTTACTTTCAATGA+TGG | - | Chr7:67590547-67590566 | None:intergenic | 25.0% |
!! | TGTTGTATTTTATAAAGGCT+TGG | + | Chr7:67590830-67590849 | MsG0780039689.01.T01:CDS | 25.0% |
!!! | AAGGTGATAAGAAGTATTTA+GGG | + | Chr7:67591249-67591268 | MsG0780039689.01.T01:CDS | 25.0% |
!!! | GAAGACAACATTTTATTTGT+CGG | + | Chr7:67591149-67591168 | MsG0780039689.01.T01:CDS | 25.0% |
AAAAGGATTCACTAGTGTTA+TGG | - | Chr7:67590616-67590635 | None:intergenic | 30.0% | |
AAGAACACATAGATCATGTT+AGG | + | Chr7:67590331-67590350 | MsG0780039689.01.T01:CDS | 30.0% | |
ATGATTTCACGAAATAAGCA+CGG | - | Chr7:67591001-67591020 | None:intergenic | 30.0% | |
CAAACTCCATGTTTACAAAT+TGG | + | Chr7:67591073-67591092 | MsG0780039689.01.T01:CDS | 30.0% | |
GTTAGAGATCTATAATGTGA+AGG | + | Chr7:67591271-67591290 | MsG0780039689.01.T01:CDS | 30.0% | |
TATTTCGTGAAATCATTGAC+TGG | + | Chr7:67591005-67591024 | MsG0780039689.01.T01:CDS | 30.0% | |
TGAAAGCGAGAAAACTAAAA+AGG | - | Chr7:67590749-67590768 | None:intergenic | 30.0% | |
TTATCAAGAACCAAACTAAG+AGG | - | Chr7:67590306-67590325 | None:intergenic | 30.0% | |
!! | ATTTTATTTGTCGGAATCTG+TGG | + | Chr7:67591158-67591177 | MsG0780039689.01.T01:CDS | 30.0% |
!! | GAAGGTGATAAGAAGTATTT+AGG | + | Chr7:67591248-67591267 | MsG0780039689.01.T01:CDS | 30.0% |
!! | GTTTTACTTTCAATGATGGA+AGG | - | Chr7:67590543-67590562 | None:intergenic | 30.0% |
!! | TAGTTTGGTTCTTGATAAGT+TGG | + | Chr7:67590308-67590327 | MsG0780039689.01.T01:CDS | 30.0% |
!! | TTTGTTCAAGTTTTCCATTC+TGG | - | Chr7:67591109-67591128 | None:intergenic | 30.0% |
!!! | TCGGTTTATTTTGTTTGTGA+AGG | + | Chr7:67591230-67591249 | MsG0780039689.01.T01:CDS | 30.0% |
AAGAACCAAACTAAGAGGAT+AGG | - | Chr7:67590301-67590320 | None:intergenic | 35.0% | |
AAGGATGGGATATCTGAATA+GGG | - | Chr7:67590524-67590543 | None:intergenic | 35.0% | |
ATAATCACTTGGGCTTGTAA+TGG | - | Chr7:67590709-67590728 | None:intergenic | 35.0% | |
CACATAGATCATGTTAGGTT+TGG | + | Chr7:67590336-67590355 | MsG0780039689.01.T01:CDS | 35.0% | |
CCAGTTCCAATTTGTAAACA+TGG | - | Chr7:67591082-67591101 | None:intergenic | 35.0% | |
CCATGTTTACAAATTGGAAC+TGG | + | Chr7:67591079-67591098 | MsG0780039689.01.T01:CDS | 35.0% | |
CTACATGACTCCAAAATGAT+TGG | - | Chr7:67590782-67590801 | None:intergenic | 35.0% | |
GAGATCTATAATGTGAAGGA+TGG | + | Chr7:67591275-67591294 | MsG0780039689.01.T01:CDS | 35.0% | |
GGTTCTACCACAATTTCAAT+GGG | + | Chr7:67591352-67591371 | MsG0780039689.01.T01:CDS | 35.0% | |
TAATCACTTGGGCTTGTAAT+GGG | - | Chr7:67590708-67590727 | None:intergenic | 35.0% | |
TATTAGACCAATTGTGTGAG+AGG | - | Chr7:67590449-67590468 | None:intergenic | 35.0% | |
! | AAAGACCAAGCCAATCATTT+TGG | + | Chr7:67590769-67590788 | MsG0780039689.01.T01:CDS | 35.0% |
! | AATCATTGACTGGAGACATA+TGG | + | Chr7:67591015-67591034 | MsG0780039689.01.T01:CDS | 35.0% |
! | ACTTTCAATGATGGAAGGAT+GGG | - | Chr7:67590538-67590557 | None:intergenic | 35.0% |
! | TACTTTCAATGATGGAAGGA+TGG | - | Chr7:67590539-67590558 | None:intergenic | 35.0% |
! | TTGTTTCTCCAAGTTGGAAA+AGG | + | Chr7:67591205-67591224 | MsG0780039689.01.T01:CDS | 35.0% |
AAAAAGTTGCATTCGCTCGA+AGG | - | Chr7:67591330-67591349 | None:intergenic | 40.0% | |
AATCACTTGGGCTTGTAATG+GGG | - | Chr7:67590707-67590726 | None:intergenic | 40.0% | |
AGAAGCCTATCCTCTTAGTT+TGG | + | Chr7:67590293-67590312 | MsG0780039689.01.T01:CDS | 40.0% | |
AGGAGGATTGTTAAGCTTGA+AGG | - | Chr7:67590889-67590908 | None:intergenic | 40.0% | |
ATGTGAAGGATGGAAGCTTT+CGG | + | Chr7:67591285-67591304 | MsG0780039689.01.T01:CDS | 40.0% | |
ATTGACTGGAGACATATGGA+TGG | + | Chr7:67591019-67591038 | MsG0780039689.01.T01:CDS | 40.0% | |
ATTTCACGAAATAAGCACGG+CGG | - | Chr7:67590998-67591017 | None:intergenic | 40.0% | |
CGGCTATAATAAGATTGCTC+TGG | - | Chr7:67590978-67590997 | None:intergenic | 40.0% | |
CTGCAACCACATAATCACTT+GGG | - | Chr7:67590719-67590738 | None:intergenic | 40.0% | |
GAAGGATGGGATATCTGAAT+AGG | - | Chr7:67590525-67590544 | None:intergenic | 40.0% | |
GGCGGTACACTATACTTAAA+AGG | - | Chr7:67590633-67590652 | None:intergenic | 40.0% | |
GGGTTCTACCACAATTTCAA+TGG | + | Chr7:67591351-67591370 | MsG0780039689.01.T01:CDS | 40.0% | |
TACAAGCCCAAGTGATTATG+TGG | + | Chr7:67590710-67590729 | MsG0780039689.01.T01:CDS | 40.0% | |
TCATTTGAGTCATCACAAGG+AGG | - | Chr7:67590906-67590925 | None:intergenic | 40.0% | |
TGATGATCCTCTCACACAAT+TGG | + | Chr7:67590439-67590458 | MsG0780039689.01.T01:CDS | 40.0% | |
TGTGAGAGGATCATCAACAT+AGG | - | Chr7:67590435-67590454 | None:intergenic | 40.0% | |
TTCCAACTTGGAGAAACAAG+AGG | - | Chr7:67591204-67591223 | None:intergenic | 40.0% | |
TTGGTATTTGCCAACAGTGA+CGG | + | Chr7:67590849-67590868 | MsG0780039689.01.T01:CDS | 40.0% | |
! | AACCGAATCCTTTTCCAACT+TGG | - | Chr7:67591216-67591235 | None:intergenic | 40.0% |
! | CTCCAAGTTGGAAAAGGATT+CGG | + | Chr7:67591211-67591230 | MsG0780039689.01.T01:CDS | 40.0% |
! | TGACTCCAAAATGATTGGCT+TGG | - | Chr7:67590777-67590796 | None:intergenic | 40.0% |
!!! | CGAGCGAATGCAACTTTTTT+GGG | + | Chr7:67591331-67591350 | MsG0780039689.01.T01:CDS | 40.0% |
!!! | TCGAGCGAATGCAACTTTTT+TGG | + | Chr7:67591330-67591349 | MsG0780039689.01.T01:CDS | 40.0% |
AACTTGGAGAAACAAGAGGC+TGG | - | Chr7:67591200-67591219 | None:intergenic | 45.0% | |
AATAGTGTCTCCGTCACTGT+TGG | - | Chr7:67590862-67590881 | None:intergenic | 45.0% | |
ACCTCTCGAATCTCTCAACA+AGG | + | Chr7:67590665-67590684 | MsG0780039689.01.T01:CDS | 45.0% | |
ACCTTGTTGAGAGATTCGAG+AGG | - | Chr7:67590669-67590688 | None:intergenic | 45.0% | |
AGATCATGTTAGGTTTGGCG+TGG | + | Chr7:67590341-67590360 | MsG0780039689.01.T01:CDS | 45.0% | |
GAGAGGATCATCAACATAGG+TGG | - | Chr7:67590432-67590451 | None:intergenic | 45.0% | |
GCTGCAACCACATAATCACT+TGG | - | Chr7:67590720-67590739 | None:intergenic | 45.0% | |
GGGTCATTTGAGTCATCACA+AGG | - | Chr7:67590909-67590928 | None:intergenic | 45.0% | |
TTGGAACTGGATGTCCAGAA+TGG | + | Chr7:67591092-67591111 | MsG0780039689.01.T01:CDS | 45.0% | |
TTGTTGAGAGATTCGAGAGG+TGG | - | Chr7:67590666-67590685 | None:intergenic | 45.0% | |
! | AGCCTCTTGTTTCTCCAAGT+TGG | + | Chr7:67591199-67591218 | MsG0780039689.01.T01:CDS | 45.0% |
TCGAGAGGTGGCAGACTAAT+GGG | - | Chr7:67590654-67590673 | None:intergenic | 50.0% | |
TGCATTCGCTCGAAGGAAAG+TGG | - | Chr7:67591323-67591342 | None:intergenic | 50.0% | |
TTCGAGAGGTGGCAGACTAA+TGG | - | Chr7:67590655-67590674 | None:intergenic | 50.0% | |
! | ACTTGTATGGGCTGTAGCCA+TGG | + | Chr7:67590561-67590580 | MsG0780039689.01.T01:CDS | 50.0% |
! | TGTAATGGGGTCAGCAGACA+AGG | - | Chr7:67590694-67590713 | None:intergenic | 50.0% |
!! | TAGCCATGGTTGGCTTGCAT+TGG | + | Chr7:67590575-67590594 | MsG0780039689.01.T01:CDS | 50.0% |
AGAGGTGGCAGACTAATGGG+CGG | - | Chr7:67590651-67590670 | None:intergenic | 55.0% | |
CCACCAATGCAAGCCAACCA+TGG | - | Chr7:67590581-67590600 | None:intergenic | 55.0% | |
TTGGCGTGGTGTGCAAGACA+TGG | + | Chr7:67590355-67590374 | MsG0780039689.01.T01:CDS | 55.0% | |
! | GTATGGGCTGTAGCCATGGT+TGG | + | Chr7:67590565-67590584 | MsG0780039689.01.T01:CDS | 55.0% |
!! | CCATGGTTGGCTTGCATTGG+TGG | + | Chr7:67590578-67590597 | MsG0780039689.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 67590267 | 67591379 | 67590267 | ID=MsG0780039689.01;Name=MsG0780039689.01 |
Chr7 | mRNA | 67590267 | 67591379 | 67590267 | ID=MsG0780039689.01.T01;Parent=MsG0780039689.01;Name=MsG0780039689.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|370 |
Chr7 | exon | 67590267 | 67591379 | 67590267 | ID=MsG0780039689.01.T01:exon:11421;Parent=MsG0780039689.01.T01 |
Chr7 | CDS | 67590267 | 67591379 | 67590267 | ID=MsG0780039689.01.T01:cds;Parent=MsG0780039689.01.T01 |
Gene Sequence |
Protein sequence |