Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039468.01.T01 | XP_003623956.2 | 66.22 | 373 | 116 | 7 | 1 | 366 | 1 | 370 | 3.52E-157 | 457 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039468.01.T01 | G7L4M6 | 66.220 | 373 | 116 | 7 | 1 | 366 | 1 | 370 | 1.68e-157 | 457 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039468.01.T01 | MTR_7g077620 | 66.220 | 373 | 116 | 7 | 1 | 366 | 1 | 370 | 4.26e-161 | 457 |
MsG0780039468.01.T01 | MTR_7g077650 | 61.097 | 383 | 123 | 13 | 1 | 368 | 1 | 372 | 2.89e-145 | 416 |
MsG0780039468.01.T01 | MTR_7g077660 | 61.186 | 371 | 131 | 9 | 5 | 368 | 4 | 368 | 8.87e-141 | 404 |
MsG0780039468.01.T01 | MTR_7g076100 | 73.418 | 237 | 56 | 4 | 137 | 368 | 66 | 300 | 1.85e-112 | 330 |
MsG0780039468.01.T01 | MTR_7g076100 | 84.615 | 52 | 8 | 0 | 1 | 52 | 1 | 52 | 1.47e-24 | 102 |
MsG0780039468.01.T01 | MTR_7g076110 | 58.163 | 294 | 112 | 6 | 85 | 368 | 21 | 313 | 8.92e-104 | 308 |
MsG0780039468.01.T01 | MTR_5g038260 | 44.000 | 400 | 165 | 16 | 6 | 368 | 6 | 383 | 6.05e-84 | 260 |
MsG0780039468.01.T01 | MTR_1g108740 | 44.180 | 378 | 156 | 16 | 6 | 366 | 5 | 344 | 6.18e-80 | 248 |
MsG0780039468.01.T01 | MTR_5g038230 | 42.278 | 395 | 149 | 16 | 6 | 366 | 4 | 353 | 3.54e-77 | 242 |
MsG0780039468.01.T01 | MTR_1g064570 | 40.380 | 421 | 171 | 17 | 5 | 368 | 3 | 400 | 1.24e-72 | 231 |
MsG0780039468.01.T01 | MTR_5g082770 | 45.161 | 310 | 131 | 11 | 6 | 301 | 4 | 288 | 1.81e-67 | 214 |
MsG0780039468.01.T01 | MTR_7g076130 | 70.968 | 124 | 32 | 2 | 167 | 286 | 25 | 148 | 7.46e-54 | 175 |
MsG0780039468.01.T01 | MTR_1g016150 | 47.208 | 197 | 95 | 5 | 3 | 193 | 2 | 195 | 2.34e-48 | 164 |
MsG0780039468.01.T01 | MTR_1g016150 | 59.375 | 64 | 18 | 2 | 254 | 314 | 177 | 235 | 2.29e-12 | 66.6 |
MsG0780039468.01.T01 | MTR_5g082780 | 41.150 | 226 | 101 | 7 | 112 | 323 | 1 | 208 | 2.71e-41 | 145 |
MsG0780039468.01.T01 | MTR_1g108750 | 44.156 | 154 | 52 | 4 | 6 | 158 | 4 | 124 | 8.25e-24 | 95.5 |
MsG0780039468.01.T01 | MTR_3g114970 | 23.454 | 388 | 232 | 16 | 5 | 364 | 3 | 353 | 1.16e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 70 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTGGTTGGCTTTCATTAA+TGG | 0.140857 | 7:+64538845 | MsG0780039468.01.T01:CDS |
GCAGCAACGACATAATTATT+TGG | 0.166448 | 7:-64538987 | None:intergenic |
AAAGAGCAAGCCAACCATTT+TGG | 0.203122 | 7:+64539039 | MsG0780039468.01.T01:CDS |
AAGTCTTGATGTTTATAAAT+TGG | 0.216976 | 7:+64539334 | MsG0780039468.01.T01:CDS |
TTCTCATAGTAAGTAAAATT+AGG | 0.229231 | 7:-64539191 | None:intergenic |
TATCCCATATGAAAATTAAA+TGG | 0.231038 | 7:+64538808 | MsG0780039468.01.T01:CDS |
TAATTATTTGGGCTTGTAAT+GGG | 0.291906 | 7:-64538975 | None:intergenic |
GGTATACTACTACACTTAAA+AGG | 0.314179 | 7:-64538897 | None:intergenic |
CAGCAACGACATAATTATTT+GGG | 0.330157 | 7:-64538986 | None:intergenic |
TATGTCGTTGCTGCCATTTA+CGG | 0.330732 | 7:+64538996 | MsG0780039468.01.T01:CDS |
AAGATGAGAAAATCCGTAAA+TGG | 0.376143 | 7:-64539009 | None:intergenic |
AAGAACACATCGATCACATT+AGG | 0.376838 | 7:+64538598 | MsG0780039468.01.T01:CDS |
CGCATCCCCTTGAAGGAAAT+AGG | 0.376883 | 7:-64539578 | None:intergenic |
AGAAGAACTACCTCTTAGTT+TGG | 0.384813 | 7:+64538560 | MsG0780039468.01.T01:CDS |
TCTCATAGTAAGTAAAATTA+GGG | 0.387493 | 7:-64539190 | None:intergenic |
ATCTTTACCTATTTCCTTCA+AGG | 0.391074 | 7:+64539571 | MsG0780039468.01.T01:CDS |
AAAACCTCGCATCCCCTTGA+AGG | 0.402319 | 7:-64539585 | None:intergenic |
TTTGAGAGGTGGCAGACTAA+TGG | 0.407722 | 7:-64538922 | None:intergenic |
GGGTTCTACCGCAATTTCAA+TGG | 0.408089 | 7:+64539609 | MsG0780039468.01.T01:CDS |
TGATGTTTATAAATTGGAAC+TGG | 0.417875 | 7:+64539340 | MsG0780039468.01.T01:CDS |
TTGAGAGGTGGCAGACTAAT+GGG | 0.429349 | 7:-64538921 | None:intergenic |
TATGAAAATTAAATGGTGTA+TGG | 0.432693 | 7:+64538815 | MsG0780039468.01.T01:CDS |
ATAATTATTTGGGCTTGTAA+TGG | 0.437481 | 7:-64538976 | None:intergenic |
TTAGGTTTGGTGTGGTGTGC+AGG | 0.455358 | 7:+64538616 | MsG0780039468.01.T01:CDS |
CACATCGATCACATTAGGTT+TGG | 0.455542 | 7:+64538603 | MsG0780039468.01.T01:CDS |
AAAGCCTTTCATCATAGCAT+TGG | 0.456480 | 7:-64539244 | None:intergenic |
AAGCCTTTCATCATAGCATT+GGG | 0.457571 | 7:-64539243 | None:intergenic |
AAGAGGTAGTTCTTCTAAGT+TGG | 0.460578 | 7:-64538553 | None:intergenic |
GTATGGACTATTCATTTGGT+TGG | 0.468308 | 7:+64538832 | MsG0780039468.01.T01:CDS |
TGGTGTATGGACTATTCATT+TGG | 0.472010 | 7:+64538828 | MsG0780039468.01.T01:CDS |
AATGAGGAAGGTAGTAGATT+GGG | 0.475711 | 7:+64538530 | None:intergenic |
TAGTTTGGTTCTTGATAAGT+TGG | 0.478359 | 7:+64538575 | MsG0780039468.01.T01:CDS |
GGTTCTACCGCAATTTCAAT+GGG | 0.481590 | 7:+64539610 | MsG0780039468.01.T01:CDS |
CTATATGAATCCAAAATGGT+TGG | 0.483203 | 7:-64539049 | None:intergenic |
CAATGAGGAAGGTAGTAGAT+TGG | 0.484957 | 7:+64538529 | None:intergenic |
AGGAGGATTGTTGATCTTGA+AGG | 0.506138 | 7:-64539150 | None:intergenic |
ATACAAGGATCTCTTCTCGT+TGG | 0.507143 | 7:-64538748 | None:intergenic |
AATCTTTGAATGGAGACATA+TGG | 0.507395 | 7:+64539276 | MsG0780039468.01.T01:CDS |
GAGATCTATAATGTGAAGGA+TGG | 0.509549 | 7:+64539533 | MsG0780039468.01.T01:CDS |
CTGCTAATTGCTGATGGCAG+CGG | 0.512572 | 7:+64539113 | MsG0780039468.01.T01:CDS |
ACCTCTCAAATCTGTTTACA+AGG | 0.516115 | 7:+64538935 | MsG0780039468.01.T01:CDS |
TTATCAAGAACCAAACTAAG+AGG | 0.520565 | 7:-64538570 | None:intergenic |
TCTTTACCTATTTCCTTCAA+GGG | 0.520742 | 7:+64539572 | MsG0780039468.01.T01:CDS |
TTGGTGTGGTGTGCAGGAGT+TGG | 0.525759 | 7:+64538622 | MsG0780039468.01.T01:CDS |
TACTACTACACTTAAAAGGA+TGG | 0.531503 | 7:-64538893 | None:intergenic |
CATCCCAATGCTATGATGAA+AGG | 0.550966 | 7:+64539240 | MsG0780039468.01.T01:CDS |
TTCTAACTTGGAGAAACAAG+AGG | 0.552906 | 7:-64539459 | None:intergenic |
ATAAATTGGAACTGGATGCC+CGG | 0.559787 | 7:+64539348 | MsG0780039468.01.T01:CDS |
GTTGATCTTGAAGGATACAA+TGG | 0.562836 | 7:-64539141 | None:intergenic |
TGTAATGGGGTCAGCAGACA+AGG | 0.568289 | 7:-64538961 | None:intergenic |
CTTTACCTATTTCCTTCAAG+GGG | 0.577911 | 7:+64539573 | MsG0780039468.01.T01:CDS |
AATTATTTGGGCTTGTAATG+GGG | 0.583882 | 7:-64538974 | None:intergenic |
AAAGGTCTGCTAATTGCTGA+TGG | 0.586662 | 7:+64539107 | MsG0780039468.01.T01:CDS |
GTGACTTAGAATGCTATACA+AGG | 0.596070 | 7:-64538763 | None:intergenic |
GTGAGGATCATGAGCATAGG+TGG | 0.597353 | 7:-64538696 | None:intergenic |
TATCAATCCCATTGAAATTG+CGG | 0.597459 | 7:-64539617 | None:intergenic |
CTTAGGCTTAGCAATGAGGA+AGG | 0.598112 | 7:+64538518 | None:intergenic |
CTTTCATCATAGCATTGGGA+TGG | 0.603237 | 7:-64539239 | None:intergenic |
TTGTAAACAGATTTGAGAGG+TGG | 0.604090 | 7:-64538933 | None:intergenic |
CGATCACATTAGGTTTGGTG+TGG | 0.607424 | 7:+64538608 | MsG0780039468.01.T01:CDS |
ATTTCCTTCAAGGGGATGCG+AGG | 0.609973 | 7:+64539581 | MsG0780039468.01.T01:CDS |
GTTAGAGATCTATAATGTGA+AGG | 0.621618 | 7:+64539529 | MsG0780039468.01.T01:CDS |
TTCGAGACAGTTCTTCTGTG+AGG | 0.625233 | 7:-64538713 | None:intergenic |
TTGGAACTGGATGCCCGGAG+TGG | 0.634177 | 7:+64539353 | MsG0780039468.01.T01:CDS |
TCTGTGAGGATCATGAGCAT+AGG | 0.639271 | 7:-64538699 | None:intergenic |
GGGTCATATGAGTCAGCACA+AGG | 0.657673 | 7:-64539170 | None:intergenic |
TTTGAATGGAGACATATGGA+TGG | 0.693585 | 7:+64539280 | MsG0780039468.01.T01:CDS |
GCCTTGTAAACAGATTTGAG+AGG | 0.700590 | 7:-64538936 | None:intergenic |
AGAGGTGGCAGACTAATGGG+AGG | 0.724272 | 7:-64538918 | None:intergenic |
TCATATGAGTCAGCACAAGG+AGG | 0.731539 | 7:-64539167 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTGATGTTGTATTTTATAA+AGG | + | Chr7:64539089-64539108 | MsG0780039468.01.T01:CDS | 15.0% |
!! | AAGTCTTGATGTTTATAAAT+TGG | + | Chr7:64539334-64539353 | MsG0780039468.01.T01:CDS | 20.0% |
!! | ACCATAAAAATCATCAATTT+AGG | + | Chr7:64538664-64538683 | MsG0780039468.01.T01:CDS | 20.0% |
!! | TATCCCATATGAAAATTAAA+TGG | + | Chr7:64538808-64538827 | MsG0780039468.01.T01:CDS | 20.0% |
!! | TATGAAAATTAAATGGTGTA+TGG | + | Chr7:64538815-64538834 | MsG0780039468.01.T01:CDS | 20.0% |
!! | TCTCATAGTAAGTAAAATTA+GGG | - | Chr7:64539193-64539212 | None:intergenic | 20.0% |
!! | TTCTCATAGTAAGTAAAATT+AGG | - | Chr7:64539194-64539213 | None:intergenic | 20.0% |
!!! | AATTGAATCTTTTTCTAACT+TGG | - | Chr7:64539474-64539493 | None:intergenic | 20.0% |
!!! | ACACCATTTAATTTTCATAT+GGG | - | Chr7:64538814-64538833 | None:intergenic | 20.0% |
!!! | TACACCATTTAATTTTCATA+TGG | - | Chr7:64538815-64538834 | None:intergenic | 20.0% |
!!! | TATTTTGTGAAATCTTTGAA+TGG | + | Chr7:64539266-64539285 | MsG0780039468.01.T01:CDS | 20.0% |
!!! | TCCTAAATTGATGATTTTTA+TGG | - | Chr7:64538668-64538687 | None:intergenic | 20.0% |
!!! | TTTTCTATATGAATCCAAAA+TGG | - | Chr7:64539056-64539075 | None:intergenic | 20.0% |
! | ATAATTATTTGGGCTTGTAA+TGG | - | Chr7:64538979-64538998 | None:intergenic | 25.0% |
! | ATATGGGATAAAAATGCAAT+GGG | - | Chr7:64538798-64538817 | None:intergenic | 25.0% |
! | TAATTATTTGGGCTTGTAAT+GGG | - | Chr7:64538978-64538997 | None:intergenic | 25.0% |
! | TGATGTTTATAAATTGGAAC+TGG | + | Chr7:64539340-64539359 | MsG0780039468.01.T01:CDS | 25.0% |
!!! | AAGACAACATTTTATTTGTC+GGG | + | Chr7:64539411-64539430 | MsG0780039468.01.T01:CDS | 25.0% |
!!! | GAAGACAACATTTTATTTGT+CGG | + | Chr7:64539410-64539429 | MsG0780039468.01.T01:CDS | 25.0% |
AAGATGAGAAAATCCGTAAA+TGG | - | Chr7:64539012-64539031 | None:intergenic | 30.0% | |
AATCTTTGAATGGAGACATA+TGG | + | Chr7:64539276-64539295 | MsG0780039468.01.T01:CDS | 30.0% | |
AATGAAAAAGCTTGAGAGTT+TGG | + | Chr7:64539388-64539407 | MsG0780039468.01.T01:CDS | 30.0% | |
AATTATTTGGGCTTGTAATG+GGG | - | Chr7:64538977-64538996 | None:intergenic | 30.0% | |
ATCTTTACCTATTTCCTTCA+AGG | + | Chr7:64539571-64539590 | MsG0780039468.01.T01:CDS | 30.0% | |
CAGCAACGACATAATTATTT+GGG | - | Chr7:64538989-64539008 | None:intergenic | 30.0% | |
CATATGGGATAAAAATGCAA+TGG | - | Chr7:64538799-64538818 | None:intergenic | 30.0% | |
CTATATGAATCCAAAATGGT+TGG | - | Chr7:64539052-64539071 | None:intergenic | 30.0% | |
GGTATACTACTACACTTAAA+AGG | - | Chr7:64538900-64538919 | None:intergenic | 30.0% | |
GTTAGAGATCTATAATGTGA+AGG | + | Chr7:64539529-64539548 | MsG0780039468.01.T01:CDS | 30.0% | |
TACTACTACACTTAAAAGGA+TGG | - | Chr7:64538896-64538915 | None:intergenic | 30.0% | |
TATGGGATAAAAATGCAATG+GGG | - | Chr7:64538797-64538816 | None:intergenic | 30.0% | |
TCTTTACCTATTTCCTTCAA+GGG | + | Chr7:64539572-64539591 | MsG0780039468.01.T01:CDS | 30.0% | |
TTATCAAGAACCAAACTAAG+AGG | - | Chr7:64538573-64538592 | None:intergenic | 30.0% | |
!! | AACATTTTATTTGTCGGGAT+TGG | + | Chr7:64539416-64539435 | MsG0780039468.01.T01:CDS | 30.0% |
!! | ATTTGGTTGGCTTTCATTAA+TGG | + | Chr7:64538845-64538864 | MsG0780039468.01.T01:CDS | 30.0% |
!! | TAGTTTGGTTCTTGATAAGT+TGG | + | Chr7:64538575-64538594 | MsG0780039468.01.T01:CDS | 30.0% |
AAAGCCTTTCATCATAGCAT+TGG | - | Chr7:64539247-64539266 | None:intergenic | 35.0% | |
AAGAACACATCGATCACATT+AGG | + | Chr7:64538598-64538617 | MsG0780039468.01.T01:CDS | 35.0% | |
AAGAGGTAGTTCTTCTAAGT+TGG | - | Chr7:64538556-64538575 | None:intergenic | 35.0% | |
AAGCCTTTCATCATAGCATT+GGG | - | Chr7:64539246-64539265 | None:intergenic | 35.0% | |
ACCTCTCAAATCTGTTTACA+AGG | + | Chr7:64538935-64538954 | MsG0780039468.01.T01:CDS | 35.0% | |
AGAAGAACTACCTCTTAGTT+TGG | + | Chr7:64538560-64538579 | MsG0780039468.01.T01:CDS | 35.0% | |
CTTTACCTATTTCCTTCAAG+GGG | + | Chr7:64539573-64539592 | MsG0780039468.01.T01:CDS | 35.0% | |
GAGATCTATAATGTGAAGGA+TGG | + | Chr7:64539533-64539552 | MsG0780039468.01.T01:CDS | 35.0% | |
GCAGCAACGACATAATTATT+TGG | - | Chr7:64538990-64539009 | None:intergenic | 35.0% | |
GTGACTTAGAATGCTATACA+AGG | - | Chr7:64538766-64538785 | None:intergenic | 35.0% | |
GTTGATCTTGAAGGATACAA+TGG | - | Chr7:64539144-64539163 | None:intergenic | 35.0% | |
TTCTAACTTGGAGAAACAAG+AGG | - | Chr7:64539462-64539481 | None:intergenic | 35.0% | |
TTGTAAACAGATTTGAGAGG+TGG | - | Chr7:64538936-64538955 | None:intergenic | 35.0% | |
TTTGAATGGAGACATATGGA+TGG | + | Chr7:64539280-64539299 | MsG0780039468.01.T01:CDS | 35.0% | |
! | GTATGGACTATTCATTTGGT+TGG | + | Chr7:64538832-64538851 | MsG0780039468.01.T01:CDS | 35.0% |
! | TGGTGTATGGACTATTCATT+TGG | + | Chr7:64538828-64538847 | MsG0780039468.01.T01:CDS | 35.0% |
!! | TTTGTTCAAGTTTTCCACTC+CGG | - | Chr7:64539370-64539389 | None:intergenic | 35.0% |
AAAGGTCTGCTAATTGCTGA+TGG | + | Chr7:64539107-64539126 | MsG0780039468.01.T01:CDS | 40.0% | |
AGGAGGATTGTTGATCTTGA+AGG | - | Chr7:64539153-64539172 | None:intergenic | 40.0% | |
ATAAATTGGAACTGGATGCC+CGG | + | Chr7:64539348-64539367 | MsG0780039468.01.T01:CDS | 40.0% | |
ATACAAGGATCTCTTCTCGT+TGG | - | Chr7:64538751-64538770 | None:intergenic | 40.0% | |
CACATCGATCACATTAGGTT+TGG | + | Chr7:64538603-64538622 | MsG0780039468.01.T01:CDS | 40.0% | |
CATCCCAATGCTATGATGAA+AGG | + | Chr7:64539240-64539259 | MsG0780039468.01.T01:CDS | 40.0% | |
GCCTTGTAAACAGATTTGAG+AGG | - | Chr7:64538939-64538958 | None:intergenic | 40.0% | |
GGTTCTACCGCAATTTCAAT+GGG | + | Chr7:64539610-64539629 | MsG0780039468.01.T01:CDS | 40.0% | |
! | AAAGAGCAAGCCAACCATTT+TGG | + | Chr7:64539039-64539058 | MsG0780039468.01.T01:CDS | 40.0% |
! | CTTTCATCATAGCATTGGGA+TGG | - | Chr7:64539242-64539261 | None:intergenic | 40.0% |
! | TATGTCGTTGCTGCCATTTA+CGG | + | Chr7:64538996-64539015 | MsG0780039468.01.T01:CDS | 40.0% |
!! | TTGTTCAAGTTTTCCACTCC+GGG | - | Chr7:64539369-64539388 | None:intergenic | 40.0% |
GGGTTCTACCGCAATTTCAA+TGG | + | Chr7:64539609-64539628 | MsG0780039468.01.T01:CDS | 45.0% | |
TCATATGAGTCAGCACAAGG+AGG | - | Chr7:64539170-64539189 | None:intergenic | 45.0% | |
TCTGTGAGGATCATGAGCAT+AGG | - | Chr7:64538702-64538721 | None:intergenic | 45.0% | |
TTCGAGACAGTTCTTCTGTG+AGG | - | Chr7:64538716-64538735 | None:intergenic | 45.0% | |
TTGAGAGGTGGCAGACTAAT+GGG | - | Chr7:64538924-64538943 | None:intergenic | 45.0% | |
TTTGAGAGGTGGCAGACTAA+TGG | - | Chr7:64538925-64538944 | None:intergenic | 45.0% | |
!! | CGATCACATTAGGTTTGGTG+TGG | + | Chr7:64538608-64538627 | MsG0780039468.01.T01:CDS | 45.0% |
AAAACCTCGCATCCCCTTGA+AGG | - | Chr7:64539588-64539607 | None:intergenic | 50.0% | |
ATTTCCTTCAAGGGGATGCG+AGG | + | Chr7:64539581-64539600 | MsG0780039468.01.T01:CDS | 50.0% | |
CGCATCCCCTTGAAGGAAAT+AGG | - | Chr7:64539581-64539600 | None:intergenic | 50.0% | |
CTGCTAATTGCTGATGGCAG+CGG | + | Chr7:64539113-64539132 | MsG0780039468.01.T01:CDS | 50.0% | |
GGGTCATATGAGTCAGCACA+AGG | - | Chr7:64539173-64539192 | None:intergenic | 50.0% | |
GTGAGGATCATGAGCATAGG+TGG | - | Chr7:64538699-64538718 | None:intergenic | 50.0% | |
! | CAAGGGGATGCGAGGTTTTT+GGG | + | Chr7:64539589-64539608 | MsG0780039468.01.T01:CDS | 50.0% |
! | TCAAGGGGATGCGAGGTTTT+TGG | + | Chr7:64539588-64539607 | MsG0780039468.01.T01:CDS | 50.0% |
! | TGTAATGGGGTCAGCAGACA+AGG | - | Chr7:64538964-64538983 | None:intergenic | 50.0% |
!! | TTAGGTTTGGTGTGGTGTGC+AGG | + | Chr7:64538616-64538635 | MsG0780039468.01.T01:CDS | 50.0% |
AGAGGTGGCAGACTAATGGG+AGG | - | Chr7:64538921-64538940 | None:intergenic | 55.0% | |
TTGGTGTGGTGTGCAGGAGT+TGG | + | Chr7:64538622-64538641 | MsG0780039468.01.T01:CDS | 55.0% | |
TTGGAACTGGATGCCCGGAG+TGG | + | Chr7:64539353-64539372 | MsG0780039468.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 64538531 | 64539637 | 64538531 | ID=MsG0780039468.01;Name=MsG0780039468.01 |
Chr7 | mRNA | 64538531 | 64539637 | 64538531 | ID=MsG0780039468.01.T01;Parent=MsG0780039468.01;Name=MsG0780039468.01.T01;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|368 |
Chr7 | exon | 64538531 | 64539637 | 64538531 | ID=MsG0780039468.01.T01:exon:9891;Parent=MsG0780039468.01.T01 |
Chr7 | CDS | 64538531 | 64539637 | 64538531 | ID=MsG0780039468.01.T01:cds;Parent=MsG0780039468.01.T01 |
Gene Sequence |
Protein sequence |