AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036798.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036798.01.T01 MTR_7g077620 66.578 377 124 2 1 377 1 375 5.30e-170 481
MsG0780036798.01.T01 MTR_7g077650 63.881 371 120 5 1 365 1 363 5.75e-152 434
MsG0780036798.01.T01 MTR_7g077660 64.246 358 108 6 1 351 1 345 3.63e-145 417
MsG0780036798.01.T01 MTR_7g076110 54.930 284 117 6 85 361 21 300 3.23e-91 277
MsG0780036798.01.T01 MTR_7g076100 62.281 228 84 2 138 365 66 291 7.35e-85 261
MsG0780036798.01.T01 MTR_7g076100 76.000 50 12 0 4 53 5 54 2.00e-19 88.2
MsG0780036798.01.T01 MTR_1g108740 44.947 376 163 14 1 365 1 343 3.94e-83 258
MsG0780036798.01.T01 MTR_5g038260 41.444 374 171 14 3 349 4 356 1.26e-72 232
MsG0780036798.01.T01 MTR_5g082770 46.624 311 131 8 5 306 4 288 8.19e-72 227
MsG0780036798.01.T01 MTR_5g038230 40.379 369 152 14 5 349 4 328 1.28e-68 221
MsG0780036798.01.T01 MTR_1g064570 39.541 392 172 15 3 349 2 373 4.20e-63 208
MsG0780036798.01.T01 MTR_7g076130 69.600 125 38 0 167 291 24 148 8.95e-54 176
MsG0780036798.01.T01 MTR_1g016150 49.206 189 89 5 1 184 1 187 1.19e-47 162
MsG0780036798.01.T01 MTR_1g016150 61.538 65 19 2 256 320 177 235 8.79e-13 68.2
MsG0780036798.01.T01 MTR_5g082780 38.298 235 109 9 119 339 6 218 1.22e-33 125
MsG0780036798.01.T01 MTR_1g108750 43.590 156 52 5 5 159 4 124 5.54e-22 90.9
MsG0780036798.01.T01 MTR_3g114970 24.346 382 209 17 1 351 1 333 8.87e-14 72.4
MsG0780036798.01.T01 MTR_3g114990 24.533 375 208 16 3 336 21 361 1.30e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 79 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGGAAGATGCTACATTT+TGG 0.206053 7:+14056292 MsG0780036798.01.T01:CDS
AAAGAGCAAGCCAATCATTT+TGG 0.214143 7:+14055729 MsG0780036798.01.T01:CDS
TTCTCATAGTAAGTAAAATT+AGG 0.229231 7:-14055884 None:intergenic
AGGAGGATTATTGAACTTAA+AGG 0.273304 7:-14055843 None:intergenic
AATGAACAAACTTGAGAGTT+TGG 0.291432 7:+14056090 MsG0780036798.01.T01:CDS
TACTCACTTGGGCTTGTAAT+CGG 0.312123 7:-14055665 None:intergenic
AAGAATACATAGATCATGTT+AGG 0.341710 7:+14055282 MsG0780036798.01.T01:CDS
TTCGAGAGGTGGCAAACTAA+TGG 0.352493 7:-14055612 None:intergenic
GATCTTTACCCCGTCCCTTC+AGG 0.356454 7:+14056275 MsG0780036798.01.T01:CDS
AACGACCTTCACCATAGCTT+TGG 0.364212 7:-14055937 None:intergenic
CAAGAACATGAGTGTGTGTT+TGG 0.364316 7:+14055508 MsG0780036798.01.T01:CDS
AGAAGCCTATCCTCTTAGTT+TGG 0.365278 7:+14055244 MsG0780036798.01.T01:CDS
TGATGTTTACAAATTAAAAC+TGG 0.368827 7:+14056042 MsG0780036798.01.T01:CDS
CAAGGATGGGATAACTGAAT+AGG 0.377070 7:-14055482 None:intergenic
TAGCAATGGGGAAGTTAGAT+TGG 0.377310 7:+14055213 None:intergenic
TCTCATAGTAAGTAAAATTA+GGG 0.387493 7:-14055883 None:intergenic
TACATAGATCATGTTAGGTT+TGG 0.394613 7:+14055287 MsG0780036798.01.T01:CDS
TCGAGAGGTGGCAAACTAAT+GGG 0.396706 7:-14055611 None:intergenic
GCCCACAATGTTGCGGCTTA+CGG 0.408374 7:+14056728 MsG0780036798.01.T01:CDS
GGGTTCTACCACAATTTCAA+TGG 0.408660 7:+14056313 MsG0780036798.01.T01:CDS
ACGACCTTCACCATAGCTTT+GGG 0.423915 7:-14055936 None:intergenic
CGCCTCTGCTTTCTCCAAGA+TGG 0.446470 7:+14056162 MsG0780036798.01.T01:CDS
ACTCACTTGGGCTTGTAATC+GGG 0.449180 7:-14055664 None:intergenic
AAGGATGGGATAACTGAATA+GGG 0.462191 7:-14055481 None:intergenic
GCCGTAAGCCGCAACATTGT+GGG 0.471270 7:-14056729 None:intergenic
TTGGCGTGGTGTGCAAGAAT+TGG 0.475029 7:+14055306 MsG0780036798.01.T01:CDS
GGTTCTACCACAATTTCAAT+GGG 0.480142 7:+14056314 MsG0780036798.01.T01:CDS
CGCCGTAAGCCGCAACATTG+TGG 0.489024 7:-14056730 None:intergenic
ACAATTTCAATGGGATTGAC+CGG 0.493359 7:+14056323 MsG0780036798.01.T01:CDS
CTGGTATTTGCTGACAACCT+TGG 0.497796 7:+14055806 MsG0780036798.01.T01:CDS
AGCAATGGGGAAGTTAGATT+GGG 0.499131 7:+14055214 None:intergenic
AAGAACATGAGTGTGTGTTT+GGG 0.500810 7:+14055509 MsG0780036798.01.T01:CDS
TCATGTTCTTGATGCAAGGA+TGG 0.501083 7:-14055496 None:intergenic
TAGTTTGGTACTTGATAAGT+TGG 0.501505 7:+14055259 MsG0780036798.01.T01:CDS
CTAATATCATTTATATGCAC+TGG 0.503512 7:-14056755 None:intergenic
GTGTGTTTGGGCTTTAGCCA+TGG 0.507415 7:+14055521 MsG0780036798.01.T01:CDS
TAGCATCTTCCTGAAGGGAC+GGG 0.508712 7:-14056284 None:intergenic
CTACACGGATCCAAAATGAT+TGG 0.509049 7:-14055739 None:intergenic
CCTTCACCATAGCTTTGGGC+TGG 0.509210 7:-14055932 None:intergenic
GTTTGGGCTTTAGCCATGGT+TGG 0.511722 7:+14055525 MsG0780036798.01.T01:CDS
TTATCAAGTACCAAACTAAG+AGG 0.513488 7:-14055254 None:intergenic
AATCGTTGAATGGAGACATA+TGG 0.523073 7:+14055969 MsG0780036798.01.T01:CDS
CATATCTATAATGCGGAGGA+TGG 0.531607 7:+14056238 MsG0780036798.01.T01:CDS
AGGATACAATGGTGCGTCCA+AGG 0.537916 7:-14055823 None:intergenic
GCTGCAACCACATACTCACT+TGG 0.539884 7:-14055677 None:intergenic
CTATTGTGCCCACAATGTTG+CGG 0.549678 7:+14056721 MsG0780036798.01.T01:CDS
GTTGATGAAAGTGATAAAGA+TGG 0.555094 7:+14056205 MsG0780036798.01.T01:CDS
AAGTACCAAACTAAGAGGAT+AGG 0.568196 7:-14055249 None:intergenic
AGTGTTCCAGCCCAAAGCTA+TGG 0.568256 7:+14055926 MsG0780036798.01.T01:CDS
GTAGCATCTTCCTGAAGGGA+CGG 0.568660 7:-14056285 None:intergenic
TACAAGCCCAAGTGAGTATG+TGG 0.569105 7:+14055670 MsG0780036798.01.T01:CDS
AAAATGTAGCATCTTCCTGA+AGG 0.572799 7:-14056290 None:intergenic
GGTCAATCCCATTGAAATTG+TGG 0.574786 7:-14056321 None:intergenic
AGCATCTTCCTGAAGGGACG+GGG 0.577537 7:-14056283 None:intergenic
ACCTCTCGAAAATATCAAGA+AGG 0.578390 7:+14055625 MsG0780036798.01.T01:CDS
TGTAATCGGGTCAGCAGACA+AGG 0.580068 7:-14055651 None:intergenic
TACGATAATTTATGTATGAG+AGG 0.585202 7:-14055397 None:intergenic
ACACTCATGTTCTTGATGCA+AGG 0.588895 7:-14055500 None:intergenic
ATTGAACTTAAAGGATACAA+TGG 0.590271 7:-14055834 None:intergenic
CATGTTCTTGATGCAAGGAT+GGG 0.593302 7:-14055495 None:intergenic
GAGAGGATCATCAACAAAGG+TGG 0.600429 7:-14055380 None:intergenic
GTTGCAGCGATTTACAATTG+TGG 0.603650 7:+14055692 MsG0780036798.01.T01:CDS
AGAGGATCATCAACAAAGGT+GGG 0.609595 7:-14055379 None:intergenic
TTCCATCTTGGAGAAAGCAG+AGG 0.613967 7:-14056164 None:intergenic
AAATGTAGCATCTTCCTGAA+GGG 0.620141 7:-14056289 None:intergenic
CTGCAACCACATACTCACTT+GGG 0.622251 7:-14055676 None:intergenic
AGATCATGTTAGGTTTGGCG+TGG 0.628602 7:+14055292 MsG0780036798.01.T01:CDS
CCAGCCCAAAGCTATGGTGA+AGG 0.629782 7:+14055932 MsG0780036798.01.T01:CDS
CATCTTGGAGAAAGCAGAGG+CGG 0.635809 7:-14056161 None:intergenic
GGGTCATTTGAGTCATCACA+AGG 0.644746 7:-14055863 None:intergenic
TGAGTTACATATCTATAATG+CGG 0.657813 7:+14056231 MsG0780036798.01.T01:CDS
GTGTAGACATAAATGAATTG+TGG 0.661724 7:+14055756 MsG0780036798.01.T01:CDS
ACAATTCATTTATGTCTACA+CGG 0.669650 7:-14055754 None:intergenic
GTTACATATCTATAATGCGG+AGG 0.671372 7:+14056234 MsG0780036798.01.T01:CDS
TTAAAACTGGATGCCCAGAG+TGG 0.678752 7:+14056055 MsG0780036798.01.T01:CDS
TATGAGAGGATCATCAACAA+AGG 0.683539 7:-14055383 None:intergenic
GTTGAATGGAGACATATGGA+TGG 0.713125 7:+14055973 MsG0780036798.01.T01:CDS
TCATTTGAGTCATCACAAGG+AGG 0.722989 7:-14055860 None:intergenic
GTAAACATCAAAATTATACG+AGG 0.728568 7:-14056029 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAATACTTAACTTAA+AGG - Chr7:14056353-14056372 None:intergenic 10.0%
!! TCATTTAAGAAAAAATTGAA+TGG - Chr7:14056382-14056401 None:intergenic 15.0%
!!! ACTAATGTTGTATTTTATAA+AGG + Chr7:14055782-14055801 MsG0780036798.01.T01:CDS 15.0%
!!! TTTATCAATGTTTTACATTA+GGG + Chr7:14056588-14056607 MsG0780036798.01.T01:intron 15.0%
!! AATTTATAAATGATCTGTTG+TGG + Chr7:14056688-14056707 MsG0780036798.01.T01:intron 20.0%
!! ACCATAAAAATCATCAATTT+AGG + Chr7:14055348-14055367 MsG0780036798.01.T01:CDS 20.0%
!! TCTCATAGTAAGTAAAATTA+GGG - Chr7:14055886-14055905 None:intergenic 20.0%
!! TGATGTTTACAAATTAAAAC+TGG + Chr7:14056042-14056061 MsG0780036798.01.T01:CDS 20.0%
!! TTCTCATAGTAAGTAAAATT+AGG - Chr7:14055887-14055906 None:intergenic 20.0%
!! TTTGTCATTATCAATGATAA+AGG - Chr7:14056418-14056437 None:intergenic 20.0%
!!! CTTTATCAATGTTTTACATT+AGG + Chr7:14056587-14056606 MsG0780036798.01.T01:intron 20.0%
!!! TCCTAAATTGATGATTTTTA+TGG - Chr7:14055352-14055371 None:intergenic 20.0%
!!! TTATCAATGTTTTACATTAG+GGG + Chr7:14056589-14056608 MsG0780036798.01.T01:intron 20.0%
! AAAAAGTTTCACTAGTGTTA+TGG - Chr7:14055576-14055595 None:intergenic 25.0%
! AAGAATACATAGATCATGTT+AGG + Chr7:14055282-14055301 MsG0780036798.01.T01:CDS 25.0%
! ACAATTCATTTATGTCTACA+CGG - Chr7:14055757-14055776 None:intergenic 25.0%
! ACTTTGTGATTGCTTAAATA+TGG - Chr7:14056615-14056634 None:intergenic 25.0%
! ATTGAACTTAAAGGATACAA+TGG - Chr7:14055837-14055856 None:intergenic 25.0%
! CTAATATCATTTATATGCAC+TGG - Chr7:14056758-14056777 None:intergenic 25.0%
! GTAAACATCAAAATTATACG+AGG - Chr7:14056032-14056051 None:intergenic 25.0%
! TACGATAATTTATGTATGAG+AGG - Chr7:14055400-14055419 None:intergenic 25.0%
! TGAGTTACATATCTATAATG+CGG + Chr7:14056231-14056250 MsG0780036798.01.T01:CDS 25.0%
!! AATTGAATTCTTTTCCATCT+TGG - Chr7:14056179-14056198 None:intergenic 25.0%
!! TATTTTGTGAAATCGTTGAA+TGG + Chr7:14055959-14055978 MsG0780036798.01.T01:CDS 25.0%
!! TGTTGTATTTTATAAAGGTC+TGG + Chr7:14055787-14055806 MsG0780036798.01.T01:CDS 25.0%
!!! AAGTTCATGGTTTTAAATTG+CGG + Chr7:14056631-14056650 MsG0780036798.01.T01:intron 25.0%
!!! ATTTTATTTGTCGGAAACTT+TGG + Chr7:14056121-14056140 MsG0780036798.01.T01:CDS 25.0%
!!! GAAGACAACATTTTATTTGT+CGG + Chr7:14056112-14056131 MsG0780036798.01.T01:CDS 25.0%
AATGAACAAACTTGAGAGTT+TGG + Chr7:14056090-14056109 MsG0780036798.01.T01:CDS 30.0%
AGGAGGATTATTGAACTTAA+AGG - Chr7:14055846-14055865 None:intergenic 30.0%
GTGTAGACATAAATGAATTG+TGG + Chr7:14055756-14055775 MsG0780036798.01.T01:CDS 30.0%
TACATAGATCATGTTAGGTT+TGG + Chr7:14055287-14055306 MsG0780036798.01.T01:CDS 30.0%
TACTTAACTTAAAGGTGAAC+CGG - Chr7:14056345-14056364 None:intergenic 30.0%
TAGTTTGGTACTTGATAAGT+TGG + Chr7:14055259-14055278 MsG0780036798.01.T01:CDS 30.0%
TTAAGCAATCACAAAGTTCA+TGG + Chr7:14056618-14056637 MsG0780036798.01.T01:intron 30.0%
TTATCAAGTACCAAACTAAG+AGG - Chr7:14055257-14055276 None:intergenic 30.0%
TTATTCGATTGTGATTGTCA+TGG + Chr7:14056521-14056540 MsG0780036798.01.T01:intron 30.0%
! GTTGATGAAAGTGATAAAGA+TGG + Chr7:14056205-14056224 MsG0780036798.01.T01:CDS 30.0%
!!! TTTTTTGTTTCCACGTGTAA+CGG + Chr7:14056492-14056511 MsG0780036798.01.T01:intron 30.0%
AAAATGTAGCATCTTCCTGA+AGG - Chr7:14056293-14056312 None:intergenic 35.0%
AAATGTAGCATCTTCCTGAA+GGG - Chr7:14056292-14056311 None:intergenic 35.0%
AAGAACATGAGTGTGTGTTT+GGG + Chr7:14055509-14055528 MsG0780036798.01.T01:CDS 35.0%
AAGGATGGGATAACTGAATA+GGG - Chr7:14055484-14055503 None:intergenic 35.0%
AAGTACCAAACTAAGAGGAT+AGG - Chr7:14055252-14055271 None:intergenic 35.0%
AATCGTTGAATGGAGACATA+TGG + Chr7:14055969-14055988 MsG0780036798.01.T01:CDS 35.0%
ACAATTTCAATGGGATTGAC+CGG + Chr7:14056323-14056342 MsG0780036798.01.T01:CDS 35.0%
ACCTCTCGAAAATATCAAGA+AGG + Chr7:14055625-14055644 MsG0780036798.01.T01:CDS 35.0%
GGTTCTACCACAATTTCAAT+GGG + Chr7:14056314-14056333 MsG0780036798.01.T01:CDS 35.0%
GTTACATATCTATAATGCGG+AGG + Chr7:14056234-14056253 MsG0780036798.01.T01:CDS 35.0%
TATGAGAGGATCATCAACAA+AGG - Chr7:14055386-14055405 None:intergenic 35.0%
! AAAGAGCAAGCCAATCATTT+TGG + Chr7:14055729-14055748 MsG0780036798.01.T01:CDS 35.0%
! TCAGGAAGATGCTACATTTT+GGG + Chr7:14056293-14056312 MsG0780036798.01.T01:CDS 35.0%
! TTCAGGAAGATGCTACATTT+TGG + Chr7:14056292-14056311 MsG0780036798.01.T01:CDS 35.0%
!! ACCTTCTTGATATTTTCGAG+AGG - Chr7:14055629-14055648 None:intergenic 35.0%
!! ATTTTAATGCAAGCCAACCA+TGG - Chr7:14055541-14055560 None:intergenic 35.0%
!! TTCTTGATATTTTCGAGAGG+TGG - Chr7:14055626-14055645 None:intergenic 35.0%
!! TTGTTCAAGTTTTCCACTCT+GGG - Chr7:14056071-14056090 None:intergenic 35.0%
!! TTTGTTCAAGTTTTCCACTC+TGG - Chr7:14056072-14056091 None:intergenic 35.0%
!!! ATGGTTTTAAATTGCGGTCT+GGG + Chr7:14056637-14056656 MsG0780036798.01.T01:intron 35.0%
ACACTCATGTTCTTGATGCA+AGG - Chr7:14055503-14055522 None:intergenic 40.0%
AGAAGCCTATCCTCTTAGTT+TGG + Chr7:14055244-14055263 MsG0780036798.01.T01:CDS 40.0%
AGAGGATCATCAACAAAGGT+GGG - Chr7:14055382-14055401 None:intergenic 40.0%
CAAGAACATGAGTGTGTGTT+TGG + Chr7:14055508-14055527 MsG0780036798.01.T01:CDS 40.0%
CAAGGATGGGATAACTGAAT+AGG - Chr7:14055485-14055504 None:intergenic 40.0%
CATATCTATAATGCGGAGGA+TGG + Chr7:14056238-14056257 MsG0780036798.01.T01:CDS 40.0%
CATGTTCTTGATGCAAGGAT+GGG - Chr7:14055498-14055517 None:intergenic 40.0%
CTACACGGATCCAAAATGAT+TGG - Chr7:14055742-14055761 None:intergenic 40.0%
GGGTTCTACCACAATTTCAA+TGG + Chr7:14056313-14056332 MsG0780036798.01.T01:CDS 40.0%
GGTCAATCCCATTGAAATTG+TGG - Chr7:14056324-14056343 None:intergenic 40.0%
GTTGAATGGAGACATATGGA+TGG + Chr7:14055973-14055992 MsG0780036798.01.T01:CDS 40.0%
GTTGCAGCGATTTACAATTG+TGG + Chr7:14055692-14055711 MsG0780036798.01.T01:CDS 40.0%
TACTCACTTGGGCTTGTAAT+CGG - Chr7:14055668-14055687 None:intergenic 40.0%
TCATGTTCTTGATGCAAGGA+TGG - Chr7:14055499-14055518 None:intergenic 40.0%
TCATTTGAGTCATCACAAGG+AGG - Chr7:14055863-14055882 None:intergenic 40.0%
TTCGATTGTGATTGTCATGG+TGG + Chr7:14056524-14056543 MsG0780036798.01.T01:intron 40.0%
!!! CATGGTTTTAAATTGCGGTC+TGG + Chr7:14056636-14056655 MsG0780036798.01.T01:intron 40.0%
AACGACCTTCACCATAGCTT+TGG - Chr7:14055940-14055959 None:intergenic 45.0%
ACGACCTTCACCATAGCTTT+GGG - Chr7:14055939-14055958 None:intergenic 45.0%
ACTCACTTGGGCTTGTAATC+GGG - Chr7:14055667-14055686 None:intergenic 45.0%
AGATCATGTTAGGTTTGGCG+TGG + Chr7:14055292-14055311 MsG0780036798.01.T01:CDS 45.0%
ATAAGAACAGCCGTTACACG+TGG - Chr7:14056505-14056524 None:intergenic 45.0%
CTATTGTGCCCACAATGTTG+CGG + Chr7:14056721-14056740 MsG0780036798.01.T01:CDS 45.0%
CTGCAACCACATACTCACTT+GGG - Chr7:14055679-14055698 None:intergenic 45.0%
GAGAGGATCATCAACAAAGG+TGG - Chr7:14055383-14055402 None:intergenic 45.0%
GGGTCATTTGAGTCATCACA+AGG - Chr7:14055866-14055885 None:intergenic 45.0%
TACAAGCCCAAGTGAGTATG+TGG + Chr7:14055670-14055689 MsG0780036798.01.T01:CDS 45.0%
TCGAGAGGTGGCAAACTAAT+GGG - Chr7:14055614-14055633 None:intergenic 45.0%
TTAAAACTGGATGCCCAGAG+TGG + Chr7:14056055-14056074 MsG0780036798.01.T01:CDS 45.0%
TTCCATCTTGGAGAAAGCAG+AGG - Chr7:14056167-14056186 None:intergenic 45.0%
TTCGAGAGGTGGCAAACTAA+TGG - Chr7:14055615-14055634 None:intergenic 45.0%
! CTGGTATTTGCTGACAACCT+TGG + Chr7:14055806-14055825 MsG0780036798.01.T01:CDS 45.0%
AGGATACAATGGTGCGTCCA+AGG - Chr7:14055826-14055845 None:intergenic 50.0%
AGTGTTCCAGCCCAAAGCTA+TGG + Chr7:14055926-14055945 MsG0780036798.01.T01:CDS 50.0%
CATCTTGGAGAAAGCAGAGG+CGG - Chr7:14056164-14056183 None:intergenic 50.0%
GCTGCAACCACATACTCACT+TGG - Chr7:14055680-14055699 None:intergenic 50.0%
GTAGCATCTTCCTGAAGGGA+CGG - Chr7:14056288-14056307 None:intergenic 50.0%
TAAATTGCGGTCTGGGTTGC+AGG + Chr7:14056644-14056663 MsG0780036798.01.T01:intron 50.0%
TAGCATCTTCCTGAAGGGAC+GGG - Chr7:14056287-14056306 None:intergenic 50.0%
TGTAATCGGGTCAGCAGACA+AGG - Chr7:14055654-14055673 None:intergenic 50.0%
TTGGCGTGGTGTGCAAGAAT+TGG + Chr7:14055306-14055325 MsG0780036798.01.T01:CDS 50.0%
! GTGTGTTTGGGCTTTAGCCA+TGG + Chr7:14055521-14055540 MsG0780036798.01.T01:CDS 50.0%
! GTTTGGGCTTTAGCCATGGT+TGG + Chr7:14055525-14055544 MsG0780036798.01.T01:CDS 50.0%
AGCATCTTCCTGAAGGGACG+GGG - Chr7:14056286-14056305 None:intergenic 55.0%
CCAGCCCAAAGCTATGGTGA+AGG + Chr7:14055932-14055951 MsG0780036798.01.T01:CDS 55.0%
CGCCTCTGCTTTCTCCAAGA+TGG + Chr7:14056162-14056181 MsG0780036798.01.T01:CDS 55.0%
GATCTTTACCCCGTCCCTTC+AGG + Chr7:14056275-14056294 MsG0780036798.01.T01:CDS 55.0%
GCCCACAATGTTGCGGCTTA+CGG + Chr7:14056728-14056747 MsG0780036798.01.T01:CDS 55.0%
GCCGTAAGCCGCAACATTGT+GGG - Chr7:14056732-14056751 None:intergenic 55.0%
!! CCTTCACCATAGCTTTGGGC+TGG - Chr7:14055935-14055954 None:intergenic 55.0%
CGCCGTAAGCCGCAACATTG+TGG - Chr7:14056733-14056752 None:intergenic 60.0%
! GGTCTGGGTTGCAGGCATTG+CGG + Chr7:14056652-14056671 MsG0780036798.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 14055218 14056790 14055218 ID=MsG0780036798.01;Name=MsG0780036798.01
Chr7 mRNA 14055218 14056790 14055218 ID=MsG0780036798.01.T01;Parent=MsG0780036798.01;Name=MsG0780036798.01.T01;_AED=0.53;_eAED=0.53;_QI=0|0|0|0.5|1|1|2|0|398
Chr7 exon 14055218 14056344 14055218 ID=MsG0780036798.01.T01:exon:2865;Parent=MsG0780036798.01.T01
Chr7 exon 14056721 14056790 14056721 ID=MsG0780036798.01.T01:exon:2866;Parent=MsG0780036798.01.T01
Chr7 CDS 14055218 14056344 14055218 ID=MsG0780036798.01.T01:cds;Parent=MsG0780036798.01.T01
Chr7 CDS 14056721 14056790 14056721 ID=MsG0780036798.01.T01:cds;Parent=MsG0780036798.01.T01
Gene Sequence

>MsG0780036798.01.T01

ATGGGGAAGTTAGATTGGGCTAATTTAGAAGCCTATCCTCTTAGTTTGGTACTTGATAAGTTGGAAGAATACATAGATCATGTTAGGTTTGGCGTGGTGTGCAAGAATTGGCTATCAATTGCAAAGCTTAACCATAAAAATCATCAATTTAGGATTAATGTCCCACCTTTGTTGATGATCCTCTCATACATAAATTATCGTATGCTTATAATATCACAGACGAAGAAGAGATATTTGTATAGTATTCTTAGTGAGAAAGAGTACCCTATTCAGTTATCCCATCCTTGCATCAAGAACATGAGTGTGTGTTTGGGCTTTAGCCATGGTTGGCTTGCATTAAAATATGATAACAAAGCCATAACACTAGTGAAACTTTTTAAGTATAGTGTAGCTCCCATTAGTTTGCCACCTCTCGAAAATATCAAGAAGGTTACCTTGTCTGCTGACCCGATTACAAGCCCAAGTGAGTATGTGGTTGCAGCGATTTACAATTGTGGTCGTCTCGCTTTGAAAAGAGCAAGCCAATCATTTTGGATCCGTGTAGACATAAATGAATTGTGGTGCACTAATGTTGTATTTTATAAAGGTCTGGTATTTGCTGACAACCTTGGACGCACCATTGTATCCTTTAAGTTCAATAATCCTCCTTGTGATGACTCAAATGACCCTAATTTTACTTACTATGAGAAGATAGCTAGCACTAGATATAGTGTTCCAGCCCAAAGCTATGGTGAAGGTCGTTATTTTGTGAAATCGTTGAATGGAGACATATGGATGGTGAGAAGAAATTTAATCGATCAGTATGACAAGTCCTCGTATAATTTTGATGTTTACAAATTAAAACTGGATGCCCAGAGTGGAAAACTTGAACAAATGAACAAACTTGAGAGTTTGGAAGACAACATTTTATTTGTCGGAAACTTTGGTGATTCAATTTCTTTGTCCGCCTCTGCTTTCTCCAAGATGGAAAAGAATTCAATTTATTTTGTTGATGAAAGTGATAAAGATGGTATTGAGTTACATATCTATAATGCGGAGGATGGAAGTGTTGACAGTCGATCTTTACCCCGTCCCTTCAGGAAGATGCTACATTTTGGGTTCTACCACAATTTCAATGGGATTGACCGCTATTGTGCCCACAATGTTGCGGCTTACGGCGTACCAGTGCATATAAATGATATTAGATTAGATGACTGA
Protein sequence

>MsG0780036798.01.T01

MGKLDWANLEAYPLSLVLDKLEEYIDHVRFGVVCKNWLSIAKLNHKNHQFRINVPPLLMILSYINYRMLIISQTKKRYLYSILSEKEYPIQLSHPCIKNMSVCLGFSHGWLALKYDNKAITLVKLFKYSVAPISLPPLENIKKVTLSADPITSPSEYVVAAIYNCGRLALKRASQSFWIRVDINELWCTNVVFYKGLVFADNLGRTIVSFKFNNPPCDDSNDPNFTYYEKIASTRYSVPAQSYGEGRYFVKSLNGDIWMVRRNLIDQYDKSSYNFDVYKLKLDAQSGKLEQMNKLESLEDNILFVGNFGDSISLSASAFSKMEKNSIYFVDESDKDGIELHIYNAEDGSVDSRSLPRPFRKMLHFGFYHNFNGIDRYCAHNVAAYGVPVHINDIRLDD*